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Gene Dmel\CG1291

General Information
Symbol	Dmel\CG1291	Species	D. melanogaster
Name		Annotation symbol	CG1291
Feature type	protein_coding_gene	FlyBase ID	FBgn0035401
Gene Model Status	Current	Stock availability	2 publicly available
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	63B5-63B6	Sequence location	3L:3,143,810..3,145,284 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG1291 (FBgn0035401). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: glycolipid mannosyltransferase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: biosynthetic process. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Glycosyl transferase, family 1. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 00-18 hour embryonic stages, during late larval stages, during early pupal stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult salivary gland, adult male accessory gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, larval/adult midgut, larval hindgut, larval/adult Malpighian tubules, larval fat body, larval salivary gland, adult spermathecae. Comments on Affy2 ProbeSet: ProbeSet 1625755_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG1291. Gene sequence location is 3L:3143810..3145284.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features HFA08298 BKN20032
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 63B5-63B6   Limits computationally determined from genome sequence between P{PZ}l(3)0680306803 and P{PZ}kst01318
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG1291 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.40
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG1291-RA FBtr0073023  NM_139515   1475   424
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG1291-PA   FBpp0072887   48.6   424   8.23     NP_647772   AAF47719
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Glycosyl transferase, family 1 (IPR001296)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA567720   AA698324   AA802218   AA802401   AE014296 AAF47719   AI456379   AW941228   AX094120   AY060893 AAL28441   AY071629 AAL49251   BF487681   BI241851   BI484484   BI635185   BI636668   BI640144   BI641940   CO264947   CO302512   EC088117   EC210204   EC234797   GH739573   GH762374   GH764102   GH769971   GH770037   GH770088   GH779386   GH779738
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q95SA2 Q9VZU8
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0035401    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0035401 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 00-18 hour embryonic stages, during late larval stages, during early pupal stages, in adult female stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0035401 expression level Developmental Stage   Expression Level embryo 00-02hr    1596 embryo 02-04hr    2216 embryo 04-06hr    2767 embryo 06-08hr    2137 embryo 08-10hr    1977 embryo 10-12hr    2310 embryo 12-14hr    1567 embryo 14-16hr    1173 embryo 16-18hr    825 embryo 18-20hr    754 embryo 20-22hr    694 embryo 22-24hr    676 larva L1    1252 larva L2    1241 larva L3 12hr old    1277 larva L3 puffstage 1-2    1497 larva L3 puffstage 3-6    1573 larva L3 puffstage 7-9    1449 white prepupae new    1474 white prepupae 12hr    1108 white prepupae 24hr    1090 pupae 2d postWPP    652 pupae 3d postWPP    609 pupae 4d postWPP    561 adult male 01day    1162 adult male 05day    1394 adult male 30day    1320 adult female 01day    1269 adult female 05day    1424 adult female 30day    1583 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1596) embryo 02-04hr  (2216) embryo 04-06hr  (2767) embryo 06-08hr  (2137) embryo 08-10hr  (1977) embryo 10-12hr  (2310) embryo 12-14hr  (1567) embryo 14-16hr  (1173) embryo 16-18hr  (825) embryo 18-20hr  (754) embryo 20-22hr  (694) embryo 22-24hr  (676) larva L1  (1252) larva L2  (1241) larva L3 12hr old  (1277) larva L3 puffstage 1-2  (1497) larva L3 puffstage 3-6  (1573) larva L3 puffstage 7-9  (1449) white prepupae new  (1474) white prepupae 12hr  (1108) white prepupae 24hr  (1090) pupae 2d postWPP  (652) pupae 3d postWPP  (609) pupae 4d postWPP  (561) adult male 01day  (1162) adult male 05day  (1394) adult male 30day  (1320) adult female 01day  (1269) adult female 05day  (1424) adult female 30day  (1583) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (1596) embryo 02-04hr  (2216) embryo 04-06hr  (2767) embryo 06-08hr  (2137) embryo 08-10hr  (1977) embryo 10-12hr  (2310) embryo 12-14hr  (1567) embryo 14-16hr    1173 embryo 16-18hr    825 embryo 18-20hr    754 embryo 20-22hr    694 embryo 22-24hr    676 larva L1    1252 larva L2    1241 larva L3 12hr old    1277 larva L3 puffstage 1-2  1497 larva L3 puffstage 3-6  (1573) larva L3 puffstage 7-9  1449 white prepupae new  1474 white prepupae 12hr    1108 white prepupae 24hr    1090 pupae 2d postWPP    652 pupae 3d postWPP    609 pupae 4d postWPP    561 adult male 01day    1162 adult male 05day    1394 adult male 30day    1320 adult female 01day    1269 adult female 05day  1424 adult female 30day  (1583) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1596 embryo 02-04hr    2216 embryo 04-06hr    2767 embryo 06-08hr    2137 embryo 08-10hr    1977 embryo 10-12hr    2310 embryo 12-14hr    1567 embryo 14-16hr    1173 embryo 16-18hr    825 embryo 18-20hr    754 embryo 20-22hr    694 embryo 22-24hr    676 larva L1    1252 larva L2    1241 larva L3 12hr old    1277 larva L3 puffstage 1-2    1497 larva L3 puffstage 3-6    1573 larva L3 puffstage 7-9    1449 white prepupae new    1474 white prepupae 12hr    1108 white prepupae 24hr    1090 pupae 2d postWPP    652 pupae 3d postWPP    609 pupae 4d postWPP    561 adult male 01day    1162 adult male 05day    1394 adult male 30day    1320 adult female 01day    1269 adult female 05day    1424 adult female 30day    1583 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1596 embryo 02-04hr    2216 embryo 04-06hr    2767 embryo 06-08hr    2137 embryo 08-10hr    1977 embryo 10-12hr    2310 embryo 12-14hr    1567 embryo 14-16hr    1173 embryo 16-18hr    825 embryo 18-20hr    754 embryo 20-22hr    694 embryo 22-24hr    676 larva L1    1252 larva L2    1241 larva L3 12hr old    1277 larva L3 puffstage 1-2    1497 larva L3 puffstage 3-6    1573 larva L3 puffstage 7-9    1449 white prepupae new    1474 white prepupae 12hr    1108 white prepupae 24hr    1090 pupae 2d postWPP    652 pupae 3d postWPP    609 pupae 4d postWPP    561 adult male 01day    1162 adult male 05day    1394 adult male 30day    1320 adult female 01day    1269 adult female 05day    1424 adult female 30day    1583 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0035401 expression level Developmental Stage   Expression Level embryo 00-02hr    1596 embryo 02-04hr    2216 embryo 04-06hr    2767 embryo 06-08hr    2137 embryo 08-10hr    1977 embryo 10-12hr    2310 embryo 12-14hr    1567 embryo 14-16hr    1173 embryo 16-18hr    825 embryo 18-20hr    754 embryo 20-22hr    694 embryo 22-24hr    676 larva L1    1252 larva L2    1241 larva L3 12hr old    1277 larva L3 puffstage 1-2    1497 larva L3 puffstage 3-6    1573 larva L3 puffstage 7-9    1449 white prepupae new    1474 white prepupae 12hr    1108 white prepupae 24hr    1090 pupae 2d postWPP    652 pupae 3d postWPP    609 pupae 4d postWPP    561 adult male 01day    1162 adult male 05day    1394 adult male 30day    1320 adult female 01day    1269 adult female 05day    1424 adult female 30day    1583 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1596) embryo 02-04hr  (2216) embryo 04-06hr  (2767) embryo 06-08hr  (2137) embryo 08-10hr  (1977) embryo 10-12hr  (2310) embryo 12-14hr  (1567) embryo 14-16hr  (1173) embryo 16-18hr  (825) embryo 18-20hr  (754) embryo 20-22hr  (694) embryo 22-24hr  (676) larva L1  (1252) larva L2  (1241) larva L3 12hr old  (1277) larva L3 puffstage 1-2  (1497) larva L3 puffstage 3-6  (1573) larva L3 puffstage 7-9  (1449) white prepupae new  (1474) white prepupae 12hr  (1108) white prepupae 24hr  (1090) pupae 2d postWPP  (652) pupae 3d postWPP  (609) pupae 4d postWPP  (561) adult male 01day  (1162) adult male 05day  (1394) adult male 30day  (1320) adult female 01day  (1269) adult female 05day  (1424) adult female 30day  (1583) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  1596 embryo 02-04hr  2216 embryo 04-06hr  (2767) embryo 06-08hr  2137 embryo 08-10hr  1977 embryo 10-12hr  2310 embryo 12-14hr  1567 embryo 14-16hr    1173 embryo 16-18hr    825 embryo 18-20hr    754 embryo 20-22hr    694 embryo 22-24hr    676 larva L1    1252 larva L2    1241 larva L3 12hr old    1277 larva L3 puffstage 1-2  1497 larva L3 puffstage 3-6  1573 larva L3 puffstage 7-9  1449 white prepupae new  1474 white prepupae 12hr    1108 white prepupae 24hr    1090 pupae 2d postWPP    652 pupae 3d postWPP    609 pupae 4d postWPP    561 adult male 01day    1162 adult male 05day    1394 adult male 30day    1320 adult female 01day    1269 adult female 05day  1424 adult female 30day  1583 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1596 embryo 02-04hr    2216 embryo 04-06hr    2767 embryo 06-08hr    2137 embryo 08-10hr    1977 embryo 10-12hr    2310 embryo 12-14hr    1567 embryo 14-16hr    1173 embryo 16-18hr    825 embryo 18-20hr    754 embryo 20-22hr    694 embryo 22-24hr    676 larva L1    1252 larva L2    1241 larva L3 12hr old    1277 larva L3 puffstage 1-2    1497 larva L3 puffstage 3-6    1573 larva L3 puffstage 7-9    1449 white prepupae new    1474 white prepupae 12hr    1108 white prepupae 24hr    1090 pupae 2d postWPP    652 pupae 3d postWPP    609 pupae 4d postWPP    561 adult male 01day    1162 adult male 05day    1394 adult male 30day    1320 adult female 01day    1269 adult female 05day    1424 adult female 30day    1583 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1596 embryo 02-04hr    2216 embryo 04-06hr    2767 embryo 06-08hr    2137 embryo 08-10hr    1977 embryo 10-12hr    2310 embryo 12-14hr    1567 embryo 14-16hr    1173 embryo 16-18hr    825 embryo 18-20hr    754 embryo 20-22hr    694 embryo 22-24hr    676 larva L1    1252 larva L2    1241 larva L3 12hr old    1277 larva L3 puffstage 1-2    1497 larva L3 puffstage 3-6    1573 larva L3 puffstage 7-9    1449 white prepupae new    1474 white prepupae 12hr    1108 white prepupae 24hr    1090 pupae 2d postWPP    652 pupae 3d postWPP    609 pupae 4d postWPP    561 adult male 01day    1162 adult male 05day    1394 adult male 30day    1320 adult female 01day    1269 adult female 05day    1424 adult female 30day    1583 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0035401    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0035401 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult salivary gland, adult male accessory gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, larval/adult midgut, larval hindgut, larval/adult Malpighian tubules, larval fat body, larval salivary gland, adult spermathecae. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0035401 expression level Tissue   Expression Level Larval Central Nervous System    71.575 Larval Midgut    187 Larval Hindgut    104.6 Larval Malpighian Tubules    216 Larval Fat Body    233.9 Larval Salivary Gland    482.2 Larval Trachea    79.4 Larval Carcass    88.125 Adult Head    71.8 Adult Eye    122.925 Adult Brain    54.5 Adult Thoracic-Abdominal Ganglion    98.2 Adult Crop    83.5 Adult Midgut    169.4 Adult Hindgut    81.9 Adult Malpighian Tubules    121.3 Adult Fat Body    94.9 Adult Salivary Gland    995.2 Adult Heart    86.15 Adult VirginFemale Spermatheca    184.4 Adult InseminatedFemale Spermatheca    218.2 Adult Ovary    86.2 Adult Testis    29.2 Adult Male Accessory Gland    983 Adult Carcass    79.1 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    71.575 Larval Midgut    187 Larval Hindgut    104.6 Larval Malpighian Tubules    216 Larval Fat Body    233.9 Larval Salivary Gland    482.2 Larval Trachea    79.4 Larval Carcass    88.125 Adult Head    71.8 Adult Eye    122.925 Adult Brain    54.5 Adult Thoracic-Abdominal Ganglion    98.2 Adult Crop    83.5 Adult Midgut    169.4 Adult Hindgut    81.9 Adult Malpighian Tubules    121.3 Adult Fat Body    94.9 Adult Salivary Gland  (995.2) Adult Heart    86.15 Adult VirginFemale Spermatheca    184.4 Adult InseminatedFemale Spermatheca    218.2 Adult Ovary    86.2 Adult Testis    29.2 Adult Male Accessory Gland  (983) Adult Carcass    79.1 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    71.575 Larval Midgut    187 Larval Hindgut    104.6 Larval Malpighian Tubules    216 Larval Fat Body    233.9 Larval Salivary Gland    482.2 Larval Trachea    79.4 Larval Carcass    88.125 Adult Head    71.8 Adult Eye    122.925 Adult Brain    54.5 Adult Thoracic-Abdominal Ganglion    98.2 Adult Crop    83.5 Adult Midgut    169.4 Adult Hindgut    81.9 Adult Malpighian Tubules    121.3 Adult Fat Body    94.9 Adult Salivary Gland    995.2 Adult Heart    86.15 Adult VirginFemale Spermatheca    184.4 Adult InseminatedFemale Spermatheca    218.2 Adult Ovary    86.2 Adult Testis    29.2 Adult Male Accessory Gland    983 Adult Carcass    79.1 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    71.575 Larval Midgut    187 Larval Hindgut    104.6 Larval Malpighian Tubules    216 Larval Fat Body    233.9 Larval Salivary Gland    482.2 Larval Trachea    79.4 Larval Carcass    88.125 Adult Head    71.8 Adult Eye    122.925 Adult Brain    54.5 Adult Thoracic-Abdominal Ganglion    98.2 Adult Crop    83.5 Adult Midgut    169.4 Adult Hindgut    81.9 Adult Malpighian Tubules    121.3 Adult Fat Body    94.9 Adult Salivary Gland    995.2 Adult Heart    86.15 Adult VirginFemale Spermatheca    184.4 Adult InseminatedFemale Spermatheca    218.2 Adult Ovary    86.2 Adult Testis    29.2 Adult Male Accessory Gland    983 Adult Carcass    79.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0035401 expression level Tissue   Expression Level Larval Central Nervous System    71.575 Larval Midgut    187 Larval Hindgut    104.6 Larval Malpighian Tubules    216 Larval Fat Body    233.9 Larval Salivary Gland    482.2 Larval Trachea    79.4 Larval Carcass    88.125 Adult Head    71.8 Adult Eye    122.925 Adult Brain    54.5 Adult Thoracic-Abdominal Ganglion    98.2 Adult Crop    83.5 Adult Midgut    169.4 Adult Hindgut    81.9 Adult Malpighian Tubules    121.3 Adult Fat Body    94.9 Adult Salivary Gland    995.2 Adult Heart    86.15 Adult VirginFemale Spermatheca    184.4 Adult InseminatedFemale Spermatheca    218.2 Adult Ovary    86.2 Adult Testis    29.2 Adult Male Accessory Gland    983 Adult Carcass    79.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    71.575 Larval Midgut    187 Larval Hindgut    104.6 Larval Malpighian Tubules    216 Larval Fat Body    233.9 Larval Salivary Gland    482.2 Larval Trachea    79.4 Larval Carcass    88.125 Adult Head    71.8 Adult Eye    122.925 Adult Brain    54.5 Adult Thoracic-Abdominal Ganglion    98.2 Adult Crop    83.5 Adult Midgut    169.4 Adult Hindgut    81.9 Adult Malpighian Tubules    121.3 Adult Fat Body    94.9 Adult Salivary Gland  (995.2) Adult Heart    86.15 Adult VirginFemale Spermatheca    184.4 Adult InseminatedFemale Spermatheca    218.2 Adult Ovary    86.2 Adult Testis    29.2 Adult Male Accessory Gland  (983) Adult Carcass    79.1 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    71.575 Larval Midgut    187 Larval Hindgut    104.6 Larval Malpighian Tubules    216 Larval Fat Body    233.9 Larval Salivary Gland    482.2 Larval Trachea    79.4 Larval Carcass    88.125 Adult Head    71.8 Adult Eye    122.925 Adult Brain    54.5 Adult Thoracic-Abdominal Ganglion    98.2 Adult Crop    83.5 Adult Midgut    169.4 Adult Hindgut    81.9 Adult Malpighian Tubules    121.3 Adult Fat Body    94.9 Adult Salivary Gland    995.2 Adult Heart    86.15 Adult VirginFemale Spermatheca    184.4 Adult InseminatedFemale Spermatheca    218.2 Adult Ovary    86.2 Adult Testis    29.2 Adult Male Accessory Gland    983 Adult Carcass    79.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    71.575 Larval Midgut    187 Larval Hindgut    104.6 Larval Malpighian Tubules    216 Larval Fat Body    233.9 Larval Salivary Gland    482.2 Larval Trachea    79.4 Larval Carcass    88.125 Adult Head    71.8 Adult Eye    122.925 Adult Brain    54.5 Adult Thoracic-Abdominal Ganglion    98.2 Adult Crop    83.5 Adult Midgut    169.4 Adult Hindgut    81.9 Adult Malpighian Tubules    121.3 Adult Fat Body    94.9 Adult Salivary Gland    995.2 Adult Heart    86.15 Adult VirginFemale Spermatheca    184.4 Adult InseminatedFemale Spermatheca    218.2 Adult Ovary    86.2 Adult Testis    29.2 Adult Male Accessory Gland    983 Adult Carcass    79.1 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    71.8   NA  Eye    122.925   NA  Brain    54.5   71.575  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    98.2   NA  Crop    83.5   187  Midgut    169.4   104.6  Hindgut    81.9   216  Malpighian Tubules    121.3   233.9  Fat Body    94.9   482.2  Salivary Gland    995.2   NA  Heart    86.15   79.4  Trachea    NA   NA  VirginFemale Spermatheca    184.4   NA  InseminatedFemale Spermatheca    218.2   NA  Ovary    86.2   NA  Testis    29.2   NA  Male Accessory Gland    983   88.125  Carcass    79.1 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_03
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0035401 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG1291-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG1291 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 7-8 Stages(s) 9-10 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal, with Scer\GAL41407 CG1291GD7863 lethal | pupal stage, with Scer\GAL4pnr-MD237 CG1291GD7863 Phenotype manifest in Allele embryonic/larval brain | larval stage, with Scer\GAL41407 CG1291GD7863
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CG1291 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG1291 Class Mutagen Stocks Known lesion CG1291GD7863 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD7863} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{GT1}CG11537BG00192 NA P{GT1}CG11537BG00917a NA
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
lipid particle inferred from direct assay (Cermelli et al., 2006)
Terms Based on Predictions or Assertions ( 2 terms )
Molecular Function
CV term Evidence References
glycolipid mannosyltransferase activity inferred from sequence or structural similarity with Saccharomyces ALG2 (FlyBase, 1992-)
Biological Process
CV term Evidence References
biosynthetic process inferred from electronic annotation with InterPro:IPR001296 (FlyBase Curators et al., 2004-)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG1291 allele Gene References
External Data
Linkouts	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0035401 DroID - A comprehensive database of gene and protein interactions. • FBgn0035401 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 38374
Orthologs
Genome-wide drosophilid orthologs	Dana\GF24268 Dere\GG14904 Dgri\GH15819 Dmoj\GI12600 Dper\GL10576 Dpse\GA11900 Dsec\GM14531 Dsim\GD13727 Dvir\GJ12723 Dwil\GK17759 Dyak\GE20359
Curated drosophilid orthologs	Dpse\GA11900
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL012034-PA Aedes aegypti (mosquito) AGAP001232-PA Anopheles gambiae (mosquito) XP_624358.1 Apis mellifera (honey bee) XP_001951998.1 Acyrthosiphon pisum (pea aphid) At1g78800.1 Arabidopsis thaliana (wall cress) 8038 Batrachochytrium dendrobatidis (chytrid fungus) 70178 Branchiostoma floridae (lancelet) XP_001891790.1 Brugia malayi (roundworm nematode) BGIBMGA010200-PA Bombyx mori (silk worm) ENSBTAP00000003187 Bos taurus (bovine) CAL0002829 Candida albicans (a form of yeast) CN08813 Caenorhabditis brenneri (small nematode) CN25589 Caenorhabditis brenneri (small nematode) CBP25022 Caenorhabditis briggsae (nematode) CE32364 Caenorhabditis elegans (worm) ENSCAFP00000003687 Canis familiaris (dog) CAGL0M05731g Candida glabrata (haploid yeast) Chro.10033 Cryptosporidium hominis (obligate parasite) ENSCINP00000001299 Ciona intestinalis (sea squirt) JA13123 Caenorhabditis japonica (nematode) CMT168C Cyanidioschyzon merolae (red alga) cn04568 Cryptococcus neoformans (yeast-like fungus) cgd1_230 Cryptosporidium parvum (protozoan parasite) ENSCPOP00000013419 Cavia porcellus (guinea pig) 122195 Chlamidomonas reinhardtii (green alga) RP48373 Caenorhabditis remanei (nematode) ENSCSAVP00000017745 Ciona savignyi (sedentary tunicate) 229017 Capitella spl (polychaete worm) DDB0231364 Dictyostelium discoideum (amoeba) DEHA2C04158g Debaryomyces Hansenii (yeast) 192054 Daphnia pulex (daphnia) ENSDARP00000094034 Danio rerio (zebra fish) ENSECAP00000009703 Equus caballus (horse) XP_653222 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000011905 Gymnopilus aculeatus (mushroom) ENSGALP00000022055 Gallus gallus (chicken) 110729 Hypsipyla robusta (cedar shoot borer) ENSP00000238477 Homo sapiens (human) ISCW008177-PA Ixodes scapularis (deer tick) KLLA0B02420g Kluyveromyces lactis (yeast) 224255 Lottia gigantea (owl limpet) LmjF34.2420 Leishmania major (virus) ENSMODP00000015846 Monodelphis domestica (gray opossum) ENSMMUP00000013969 Macaca mulatta (rhesus monkey) ENSMUSP00000043580 Mus musculus (house mouse) 93273 Nematostella vectensis (starlet anemone) XP_001607310.1 Nasonia vitripennis (wasp) ENSOANP00000023425 Ornithorynchus anatinus (platypus) ENSORLP00000010943 Oryzias latipes (japanese killifish) LOC_Os04g49960.1 Oryza sativa (asian rice) 15723 Ostreococcus tauri (green alga) PHUM000849-PA Pediculus humanus (human body louse) PP23696 Pristionchus pacificus (nematode) 222991 Physcomitrella patens (moss) ENSPPYP00000021784 Pongo pygmaeus (orangutan) 108450 Phytophthora sojae (root rot pathogen) 568797 Populus trichocarpa (black cottonwood) ENSPTRP00000036202 Pan troglodytes (chimpanzee) ENSRNOP00000008913 Rattus norvegicus (norway rat) 5006833 Sorghum bicolor (sorghum) YGL065C Saccharomyces cerevisiae (budding yeast) Smp_177080 Schistosoma mansoni (trematode parasite) SPBC11B10.01 Schizosaccharomyces pombe (fission yeast) XP_794663.2 Strongylocentrotus purpuratus (purple sea urchin) XP_968890.2 Tribolium castaneum (red flour beetle) Tc00.1047053506559.420 Trypanosoma cruzi (parasitic trypanosome) ENSTNIP00000021550 Tetraodon nigroviridis (green spotted pufferfish) 263193 Thalassiosira pseudonana (marine diatom) ENSTRUP00000028695 Takifugu rubripes (pufferfish Takifugu) 3689.m00073 Tetrahymena thermophila (ciliate protozoa) 93205.m00051 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000026182 Xenopus tropicalis (frog) YALI0E31797g Yarrowia lipolytica (nonconventional yeast) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB11797 NV12749 LH12161 ISCW008177 FBgn0237675 FBgn0219758 FBgn0199959 FBgn0185433 FBgn0169453 JGI_V11_192054 FBgn0071949 FBgn0135357 FBgn0123290 FBgn0107158 FBgn0101262 BGIBMGA010200 ACYPI005896 GB17208 AGAP001232 AAEL012034 PHUM599360 GLEAN_13994
Stocks & Reagents
Stocks Listed in FlyBase ( 2 )
VDRC	v32115 w1118; P{GD7863}v32115 v32116 w1118; P{GD7863}v32116
Genomic Clones ( 1 )
	BACR48E19 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 26 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GM04690 RE67594
Other clones	DPiM_RE67594
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT22715 GM04035 HL01678 LD36381 RE39038 SD16455 SD18436 SD22942 SD25621
Other clones	32258 59526 107373 EK141017 EK184323 HL04281 RP001010715 RP001024208 RP001025018 RP001025649 RP001026617 RP001036891 RP001044910 RP001048229
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0035401 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 38374
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
	Area matching Drosophila EST AA802401. This EST has sequence similarity to glycosyltransferase genes. (Davies, 2001.3.15)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_139515 RefSeq (Proteins) • NP_647772 DDBJ / EMBL / GenBank • AA802401 AAF47719 AAL28441 AAL49251 AW941228 AX094120 AY060893 AY071629 BI484484 Entrez Gene - A searchable database of RefSeq genes. • 38374 UniProtKB/TrEMBL • Q9VZU8 Q95SA2
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Glycosyl transferase, family 1 (IPR001296)
Linkouts
	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0035401 DroID - A comprehensive database of gene and protein interactions. • FBgn0035401 DRSC - Results from RNAi screens. • FBgn0035401 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0035401 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG1291-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0035401 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 38374 InParanoid A subset of ortholog calls from InParanoid. • AAEL012034-PA Aedes aegypti (mosquito) AGAP001232-PA Anopheles gambiae (mosquito) XP_624358.1 Apis mellifera (honey bee) XP_001951998.1 Acyrthosiphon pisum (pea aphid) At1g78800.1 Arabidopsis thaliana (wall cress) 8038 Batrachochytrium dendrobatidis (chytrid fungus) 70178 Branchiostoma floridae (lancelet) XP_001891790.1 Brugia malayi (roundworm nematode) BGIBMGA010200-PA Bombyx mori (silk worm) ENSBTAP00000003187 Bos taurus (bovine) CAL0002829 Candida albicans (a form of yeast) CN08813 Caenorhabditis brenneri (small nematode) CN25589 Caenorhabditis brenneri (small nematode) CBP25022 Caenorhabditis briggsae (nematode) CE32364 Caenorhabditis elegans (worm) ENSCAFP00000003687 Canis familiaris (dog) CAGL0M05731g Candida glabrata (haploid yeast) Chro.10033 Cryptosporidium hominis (obligate parasite) ENSCINP00000001299 Ciona intestinalis (sea squirt) JA13123 Caenorhabditis japonica (nematode) CMT168C Cyanidioschyzon merolae (red alga) cn04568 Cryptococcus neoformans (yeast-like fungus) cgd1_230 Cryptosporidium parvum (protozoan parasite) ENSCPOP00000013419 Cavia porcellus (guinea pig) 122195 Chlamidomonas reinhardtii (green alga) RP48373 Caenorhabditis remanei (nematode) ENSCSAVP00000017745 Ciona savignyi (sedentary tunicate) 229017 Capitella spl (polychaete worm) DDB0231364 Dictyostelium discoideum (amoeba) DEHA2C04158g Debaryomyces Hansenii (yeast) 192054 Daphnia pulex (daphnia) ENSDARP00000094034 Danio rerio (zebra fish) ENSECAP00000009703 Equus caballus (horse) XP_653222 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000011905 Gymnopilus aculeatus (mushroom) ENSGALP00000022055 Gallus gallus (chicken) 110729 Hypsipyla robusta (cedar shoot borer) ENSP00000238477 Homo sapiens (human) ISCW008177-PA Ixodes scapularis (deer tick) KLLA0B02420g Kluyveromyces lactis (yeast) 224255 Lottia gigantea (owl limpet) LmjF34.2420 Leishmania major (virus) ENSMODP00000015846 Monodelphis domestica (gray opossum) ENSMMUP00000013969 Macaca mulatta (rhesus monkey) ENSMUSP00000043580 Mus musculus (house mouse) 93273 Nematostella vectensis (starlet anemone) XP_001607310.1 Nasonia vitripennis (wasp) ENSOANP00000023425 Ornithorynchus anatinus (platypus) ENSORLP00000010943 Oryzias latipes (japanese killifish) LOC_Os04g49960.1 Oryza sativa (asian rice) 15723 Ostreococcus tauri (green alga) PHUM000849-PA Pediculus humanus (human body louse) PP23696 Pristionchus pacificus (nematode) 222991 Physcomitrella patens (moss) ENSPPYP00000021784 Pongo pygmaeus (orangutan) 108450 Phytophthora sojae (root rot pathogen) 568797 Populus trichocarpa (black cottonwood) ENSPTRP00000036202 Pan troglodytes (chimpanzee) ENSRNOP00000008913 Rattus norvegicus (norway rat) 5006833 Sorghum bicolor (sorghum) YGL065C Saccharomyces cerevisiae (budding yeast) Smp_177080 Schistosoma mansoni (trematode parasite) SPBC11B10.01 Schizosaccharomyces pombe (fission yeast) XP_794663.2 Strongylocentrotus purpuratus (purple sea urchin) XP_968890.2 Tribolium castaneum (red flour beetle) Tc00.1047053506559.420 Trypanosoma cruzi (parasitic trypanosome) ENSTNIP00000021550 Tetraodon nigroviridis (green spotted pufferfish) 263193 Thalassiosira pseudonana (marine diatom) ENSTRUP00000028695 Takifugu rubripes (pufferfish Takifugu) 3689.m00073 Tetrahymena thermophila (ciliate protozoa) 93205.m00051 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000026182 Xenopus tropicalis (frog) YALI0E31797g Yarrowia lipolytica (nonconventional yeast) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 38374 modMine - Data generated by the modENCODE project. • FBgn0035401 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB11797 NV12749 LH12161 ISCW008177 FBgn0237675 FBgn0219758 FBgn0199959 FBgn0185433 FBgn0169453 JGI_V11_192054 FBgn0071949 FBgn0135357 FBgn0123290 FBgn0107158 FBgn0101262 BGIBMGA010200 ACYPI005896 GB17208 AGAP001232 AAEL012034 PHUM599360 GLEAN_13994
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG1291 (Cermelli et al., 2006, Liu and Lehmann, 2008)
Name Synonym
Secondary FlyBase IDs
References ( 14 )
Research paper	Liu and Lehmann, 2008, Insect Molec. Biol. 17(2): 91--101 Genes and biological processes controlled by the Drosophila FOXA orthologue Fork head. [FBrf0204414] Cermelli et al., 2006, Curr. Biol. 16(18): 1783--1795 The lipid-droplet proteome reveals that droplets are a protein-storage depot. [FBrf0192764] Inlow and Restifo, 2004, Genetics 166(2): 835--881 Molecular and comparative genetics of mental retardation. [FBrf0174714]
Supplementary material	Neumüller et al., 2011, Cell Stem Cell 8(5): Supplemental Table S1. [FBrf0214431] The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase	Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
FlyBase analysis	FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Patent	Davies et al., 2001, World Patent 0118547: Essential genes and assays relating thereto. [FBrf0199103]
DNA/RNA sequence record	Davies, 2001.3.15, GenBank/EMBL/DDBJ: AX094120 Sequence 244 from Patent WO0118547. [FBrf0149940]
Computer file	Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]