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Gene Dmel\CG11357

General Information
Symbol	Dmel\CG11357	Species	D. melanogaster
Name		Annotation symbol	CG11357
Feature type	protein_coding_gene	FlyBase ID	FBgn0035558
Gene Model Status	Current	Stock availability	8 publicly available
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	64B9-64B9	Sequence location	3L:4,542,051..4,553,457 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG11357 (FBgn0035558). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity; transferase activity, transferring glycosyl groups. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: protein glycosylation. 10 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. Protein features are: Glycosyl transferase, family 31. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval central nervous system, larval Malpighian tubules. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult central nervous system, larval/adult midgut, larval/adult hindgut, adult Malpighian tubules, adult heart, larval/adult fat body, larval salivary gland, larval trachea, adult female reproductive system, adult testis, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1632063_s_at completely aligns to an exonic region common to each of the 3 FlyBase-annotated transcript isoforms of CG11357. Gene sequence location is 3L:4542051..4553457.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 64B9-64B9   Limits computationally determined from genome sequence between P{PZ}l(3)rG166rG166 and P{PZ}sinu06524
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG11357 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.46
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG11357-RA FBtr0073310  NM_139659   2686   434 CG11357-RB FBtr0113142  NM_001104035   2326   434 CG11357-RC FBtr0113143  NM_001104036   3080   434 CG11357-RD FBtr0304987  NM_001259697   2611   434
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG11357-PA   FBpp0073166   49.0   434   8.91     NP_647916   AAF47918 CG11357-PB   FBpp0112055   49.0   434   8.91     NP_001097505   ABW08464 CG11357-PC   FBpp0112056   49.0   434   8.91     NP_001097506   ABW08465 CG11357-PD   FBpp0293524   49.0   434   8.91     NP_001246626   AFH04297
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Glycosyl transferase, family 31 (IPR002659)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA140840   AA140841   AA263200   AA264652   AA391543   AA392329   AA438881   AA539567   AA695734   AA735109   AA816605   AA942165   AE014296 AAF47918   AE014296 ABW08464   AE014296 ABW08465   AE014296 AFH04297   AW941217   AY060884 AAL28432   AY231850   BF503945   BI162945   BI163551   BI165108   BI165164   BI165711   BI167660   BI170338   BI212570   BI213398   BI216539   BI235146   BI237458   BI237961   BI239677   BI243120   BI486814   BI579507   BI580166   BI580871   BI637265   BI637528   BI638249   BT023925   CL943535   CO156507   CO156696   CO178339   CO266385   CO281767   CO282176   CO283035   CO294866   CO301293   CO339664   CZ471197   CZ471198   CZ489510   EC073040   EC081961   EC085249   EC199555   EC209124   EC211140   EC223168   EC224242   EC224594   EC241658   EC261245   EC264177   EC265794   GH743688   GH743828   GH744932   GH745577   GH761433   GH763651   GH764236   GH764538   GH765857   GH765913   GH766406   GH767409
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VZA6 Q95SA8
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval central nervous system, larval Malpighian tubules. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult central nervous system, larval/adult midgut, larval/adult hindgut, adult Malpighian tubules, adult heart, larval/adult fat body, larval salivary gland, larval trachea, adult female reproductive system, adult testis, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    536.85 Larval Midgut    189.1 Larval Hindgut    333.1 Larval Malpighian Tubules    656.4 Larval Fat Body    475.4 Larval Salivary Gland    212.2 Larval Trachea    151.825 Larval Carcass    273.5 Adult Head    246.6 Adult Eye    95.6 Adult Brain    471.8 Adult Thoracic-Abdominal Ganglion    381.3 Adult Crop    88.5 Adult Midgut    150.7 Adult Hindgut    176.2 Adult Malpighian Tubules    188.3 Adult Fat Body    274.1 Adult Salivary Gland    63.7 Adult Heart    261.175 Adult VirginFemale Spermatheca    323.8 Adult InseminatedFemale Spermatheca    396.8 Adult Ovary    451.2 Adult Testis    123.1 Adult Male Accessory Gland    25 Adult Carcass    115.1 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  536.85 Larval Midgut    189.1 Larval Hindgut    333.1 Larval Malpighian Tubules  (656.4) Larval Fat Body    475.4 Larval Salivary Gland    212.2 Larval Trachea    151.825 Larval Carcass    273.5 Adult Head    246.6 Adult Eye    95.6 Adult Brain    471.8 Adult Thoracic-Abdominal Ganglion    381.3 Adult Crop    88.5 Adult Midgut    150.7 Adult Hindgut    176.2 Adult Malpighian Tubules    188.3 Adult Fat Body    274.1 Adult Salivary Gland    63.7 Adult Heart    261.175 Adult VirginFemale Spermatheca    323.8 Adult InseminatedFemale Spermatheca    396.8 Adult Ovary    451.2 Adult Testis    123.1 Adult Male Accessory Gland    25 Adult Carcass    115.1 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    536.85 Larval Midgut    189.1 Larval Hindgut    333.1 Larval Malpighian Tubules    656.4 Larval Fat Body    475.4 Larval Salivary Gland    212.2 Larval Trachea    151.825 Larval Carcass    273.5 Adult Head    246.6 Adult Eye    95.6 Adult Brain    471.8 Adult Thoracic-Abdominal Ganglion    381.3 Adult Crop    88.5 Adult Midgut    150.7 Adult Hindgut    176.2 Adult Malpighian Tubules    188.3 Adult Fat Body    274.1 Adult Salivary Gland    63.7 Adult Heart    261.175 Adult VirginFemale Spermatheca    323.8 Adult InseminatedFemale Spermatheca    396.8 Adult Ovary    451.2 Adult Testis    123.1 Adult Male Accessory Gland    25 Adult Carcass    115.1 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    536.85 Larval Midgut    189.1 Larval Hindgut    333.1 Larval Malpighian Tubules    656.4 Larval Fat Body    475.4 Larval Salivary Gland    212.2 Larval Trachea    151.825 Larval Carcass    273.5 Adult Head    246.6 Adult Eye    95.6 Adult Brain    471.8 Adult Thoracic-Abdominal Ganglion    381.3 Adult Crop    88.5 Adult Midgut    150.7 Adult Hindgut    176.2 Adult Malpighian Tubules    188.3 Adult Fat Body    274.1 Adult Salivary Gland    63.7 Adult Heart    261.175 Adult VirginFemale Spermatheca    323.8 Adult InseminatedFemale Spermatheca    396.8 Adult Ovary    451.2 Adult Testis    123.1 Adult Male Accessory Gland    25 Adult Carcass    115.1 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    536.85 Larval Midgut    189.1 Larval Hindgut    333.1 Larval Malpighian Tubules    656.4 Larval Fat Body    475.4 Larval Salivary Gland    212.2 Larval Trachea    151.825 Larval Carcass    273.5 Adult Head    246.6 Adult Eye    95.6 Adult Brain    471.8 Adult Thoracic-Abdominal Ganglion    381.3 Adult Crop    88.5 Adult Midgut    150.7 Adult Hindgut    176.2 Adult Malpighian Tubules    188.3 Adult Fat Body    274.1 Adult Salivary Gland    63.7 Adult Heart    261.175 Adult VirginFemale Spermatheca    323.8 Adult InseminatedFemale Spermatheca    396.8 Adult Ovary    451.2 Adult Testis    123.1 Adult Male Accessory Gland    25 Adult Carcass    115.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  536.85 Larval Midgut    189.1 Larval Hindgut    333.1 Larval Malpighian Tubules  656.4 Larval Fat Body    475.4 Larval Salivary Gland    212.2 Larval Trachea    151.825 Larval Carcass    273.5 Adult Head    246.6 Adult Eye    95.6 Adult Brain    471.8 Adult Thoracic-Abdominal Ganglion    381.3 Adult Crop    88.5 Adult Midgut    150.7 Adult Hindgut    176.2 Adult Malpighian Tubules    188.3 Adult Fat Body    274.1 Adult Salivary Gland    63.7 Adult Heart    261.175 Adult VirginFemale Spermatheca    323.8 Adult InseminatedFemale Spermatheca    396.8 Adult Ovary    451.2 Adult Testis    123.1 Adult Male Accessory Gland    25 Adult Carcass    115.1 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    536.85 Larval Midgut    189.1 Larval Hindgut    333.1 Larval Malpighian Tubules    656.4 Larval Fat Body    475.4 Larval Salivary Gland    212.2 Larval Trachea    151.825 Larval Carcass    273.5 Adult Head    246.6 Adult Eye    95.6 Adult Brain    471.8 Adult Thoracic-Abdominal Ganglion    381.3 Adult Crop    88.5 Adult Midgut    150.7 Adult Hindgut    176.2 Adult Malpighian Tubules    188.3 Adult Fat Body    274.1 Adult Salivary Gland    63.7 Adult Heart    261.175 Adult VirginFemale Spermatheca    323.8 Adult InseminatedFemale Spermatheca    396.8 Adult Ovary    451.2 Adult Testis    123.1 Adult Male Accessory Gland    25 Adult Carcass    115.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    536.85 Larval Midgut    189.1 Larval Hindgut    333.1 Larval Malpighian Tubules    656.4 Larval Fat Body    475.4 Larval Salivary Gland    212.2 Larval Trachea    151.825 Larval Carcass    273.5 Adult Head    246.6 Adult Eye    95.6 Adult Brain    471.8 Adult Thoracic-Abdominal Ganglion    381.3 Adult Crop    88.5 Adult Midgut    150.7 Adult Hindgut    176.2 Adult Malpighian Tubules    188.3 Adult Fat Body    274.1 Adult Salivary Gland    63.7 Adult Heart    261.175 Adult VirginFemale Spermatheca    323.8 Adult InseminatedFemale Spermatheca    396.8 Adult Ovary    451.2 Adult Testis    123.1 Adult Male Accessory Gland    25 Adult Carcass    115.1 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    246.6   NA  Eye    95.6   NA  Brain    471.8   536.85  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    381.3   NA  Crop    88.5   189.1  Midgut    150.7   333.1  Hindgut    176.2   656.4  Malpighian Tubules    188.3   475.4  Fat Body    274.1   212.2  Salivary Gland    63.7   NA  Heart    261.175   151.825  Trachea    NA   NA  VirginFemale Spermatheca    323.8   NA  InseminatedFemale Spermatheca    396.8   NA  Ovary    451.2   NA  Testis    123.1   NA  Male Accessory Gland    25   273.5  Carcass    115.1 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    15 central nervous system, larvae L3    22 central nervous system, pupae P8    21 head, virgin 1-day female    11 head, virgin 4-day female    8 head, virgin 20-day female    5 head, mated 1-day female    10 head, mated 4-day female    8 head, mated 20-day female    6 head, mated 1-day male    13 head, mated 4-day male    14 head, mated 20-day male    10 salivary gland, larvae L3 wandering    4 salivary gland, white prepupae    12 digestive system, larvae L3 wandering    11 digestive system, 1-day adult    4 digestive system, 4-day adult    7 digestive system, 20-day adult    5 fat body, larvae L3 wandering    8 fat body, white prepupae    7 fat body, pupae P8    18 carcass, larvae L3 wandering    16 carcass, 1-day adult    4 carcass, 4-day adult    6 carcass, 20-day adult    5 ovary, virgin 4-day female    32 ovary, mated 4-day female    26 testis, mated 4-day male    8 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    15 central nervous system, larvae L3    22 central nervous system, pupae P8    21 head, virgin 1-day female    11 head, virgin 4-day female    8 head, virgin 20-day female    5 head, mated 1-day female    10 head, mated 4-day female    8 head, mated 20-day female    6 head, mated 1-day male    13 head, mated 4-day male    14 head, mated 20-day male    10 salivary gland, larvae L3 wandering    4 salivary gland, white prepupae    12 digestive system, larvae L3 wandering    11 digestive system, 1-day adult    4 digestive system, 4-day adult    7 digestive system, 20-day adult    5 fat body, larvae L3 wandering    8 fat body, white prepupae    7 fat body, pupae P8    18 carcass, larvae L3 wandering    16 carcass, 1-day adult    4 carcass, 4-day adult    6 carcass, 20-day adult    5 ovary, virgin 4-day female  (32) ovary, mated 4-day female  26 testis, mated 4-day male    8 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    15 central nervous system, larvae L3    22 central nervous system, pupae P8    21 head, virgin 1-day female    11 head, virgin 4-day female    8 head, virgin 20-day female    5 head, mated 1-day female    10 head, mated 4-day female    8 head, mated 20-day female    6 head, mated 1-day male    13 head, mated 4-day male    14 head, mated 20-day male    10 salivary gland, larvae L3 wandering    4 salivary gland, white prepupae    12 digestive system, larvae L3 wandering    11 digestive system, 1-day adult    4 digestive system, 4-day adult    7 digestive system, 20-day adult    5 fat body, larvae L3 wandering    8 fat body, white prepupae    7 fat body, pupae P8    18 carcass, larvae L3 wandering    16 carcass, 1-day adult    4 carcass, 4-day adult    6 carcass, 20-day adult    5 ovary, virgin 4-day female    32 ovary, mated 4-day female    26 testis, mated 4-day male    8 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    15 central nervous system, larvae L3    22 central nervous system, pupae P8    21 head, virgin 1-day female    11 head, virgin 4-day female    8 head, virgin 20-day female    5 head, mated 1-day female    10 head, mated 4-day female    8 head, mated 20-day female    6 head, mated 1-day male    13 head, mated 4-day male    14 head, mated 20-day male    10 salivary gland, larvae L3 wandering    4 salivary gland, white prepupae    12 digestive system, larvae L3 wandering    11 digestive system, 1-day adult    4 digestive system, 4-day adult    7 digestive system, 20-day adult    5 fat body, larvae L3 wandering    8 fat body, white prepupae    7 fat body, pupae P8    18 carcass, larvae L3 wandering    16 carcass, 1-day adult    4 carcass, 4-day adult    6 carcass, 20-day adult    5 ovary, virgin 4-day female    32 ovary, mated 4-day female    26 testis, mated 4-day male    8 accessory gland, mated 4-day male    4 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    15 central nervous system, larvae L3    22 central nervous system, pupae P8    21 head, virgin 1-day female    11 head, virgin 4-day female    8 head, virgin 20-day female    5 head, mated 1-day female    10 head, mated 4-day female    8 head, mated 20-day female    6 head, mated 1-day male    13 head, mated 4-day male    14 head, mated 20-day male    10 salivary gland, larvae L3 wandering    4 salivary gland, white prepupae    12 digestive system, larvae L3 wandering    11 digestive system, 1-day adult    4 digestive system, 4-day adult    7 digestive system, 20-day adult    5 fat body, larvae L3 wandering    8 fat body, white prepupae    7 fat body, pupae P8    18 carcass, larvae L3 wandering    16 carcass, 1-day adult    4 carcass, 4-day adult    6 carcass, 20-day adult    5 ovary, virgin 4-day female    32 ovary, mated 4-day female    26 testis, mated 4-day male    8 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    15 central nervous system, larvae L3    22 central nervous system, pupae P8    21 head, virgin 1-day female    11 head, virgin 4-day female    8 head, virgin 20-day female    5 head, mated 1-day female    10 head, mated 4-day female    8 head, mated 20-day female    6 head, mated 1-day male    13 head, mated 4-day male    14 head, mated 20-day male    10 salivary gland, larvae L3 wandering    4 salivary gland, white prepupae    12 digestive system, larvae L3 wandering    11 digestive system, 1-day adult    4 digestive system, 4-day adult    7 digestive system, 20-day adult    5 fat body, larvae L3 wandering    8 fat body, white prepupae    7 fat body, pupae P8    18 carcass, larvae L3 wandering    16 carcass, 1-day adult    4 carcass, 4-day adult    6 carcass, 20-day adult    5 ovary, virgin 4-day female  32 ovary, mated 4-day female  26 testis, mated 4-day male    8 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    15 central nervous system, larvae L3    22 central nervous system, pupae P8    21 head, virgin 1-day female    11 head, virgin 4-day female    8 head, virgin 20-day female    5 head, mated 1-day female    10 head, mated 4-day female    8 head, mated 20-day female    6 head, mated 1-day male    13 head, mated 4-day male    14 head, mated 20-day male    10 salivary gland, larvae L3 wandering    4 salivary gland, white prepupae    12 digestive system, larvae L3 wandering    11 digestive system, 1-day adult    4 digestive system, 4-day adult    7 digestive system, 20-day adult    5 fat body, larvae L3 wandering    8 fat body, white prepupae    7 fat body, pupae P8    18 carcass, larvae L3 wandering    16 carcass, 1-day adult    4 carcass, 4-day adult    6 carcass, 20-day adult    5 ovary, virgin 4-day female    32 ovary, mated 4-day female    26 testis, mated 4-day male    8 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    15 central nervous system, larvae L3    22 central nervous system, pupae P8    21 head, virgin 1-day female    11 head, virgin 4-day female    8 head, virgin 20-day female    5 head, mated 1-day female    10 head, mated 4-day female    8 head, mated 20-day female    6 head, mated 1-day male    13 head, mated 4-day male    14 head, mated 20-day male    10 salivary gland, larvae L3 wandering    4 salivary gland, white prepupae    12 digestive system, larvae L3 wandering    11 digestive system, 1-day adult    4 digestive system, 4-day adult    7 digestive system, 20-day adult    5 fat body, larvae L3 wandering    8 fat body, white prepupae    7 fat body, pupae P8    18 carcass, larvae L3 wandering    16 carcass, 1-day adult    4 carcass, 4-day adult    6 carcass, 20-day adult    5 ovary, virgin 4-day female    32 ovary, mated 4-day female    26 testis, mated 4-day male    8 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    57 embryo 02-04hr    63 embryo 04-06hr    54 embryo 06-08hr    34 embryo 08-10hr    33 embryo 10-12hr    32 embryo 12-14hr    28 embryo 14-16hr    24 embryo 16-18hr    23 embryo 18-20hr    17 embryo 20-22hr    25 embryo 22-24hr    28 larva L1    17 larva L2    11 larva L3 12hr old    7 larva L3 puffstage 1-2    10 larva L3 puffstage 3-6    18 larva L3 puffstage 7-9    29 white prepupae new    23 white prepupae 12hr    28 white prepupae 24hr    24 pupae 2d postWPP    16 pupae 3d postWPP    9 pupae 4d postWPP    12 adult male 01day    10 adult male 05day    12 adult male 30day    11 adult female 01day    17 adult female 05day    29 adult female 30day    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (57) embryo 02-04hr  (63) embryo 04-06hr  (54) embryo 06-08hr  (34) embryo 08-10hr  (33) embryo 10-12hr  (32) embryo 12-14hr  (28) embryo 14-16hr    24 embryo 16-18hr    23 embryo 18-20hr    17 embryo 20-22hr    25 embryo 22-24hr  (28) larva L1    17 larva L2    11 larva L3 12hr old    7 larva L3 puffstage 1-2    10 larva L3 puffstage 3-6    18 larva L3 puffstage 7-9  (29) white prepupae new    23 white prepupae 12hr  (28) white prepupae 24hr    24 pupae 2d postWPP    16 pupae 3d postWPP    9 pupae 4d postWPP    12 adult male 01day    10 adult male 05day    12 adult male 30day    11 adult female 01day    17 adult female 05day  (29) adult female 30day  (29) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    57 embryo 02-04hr    63 embryo 04-06hr    54 embryo 06-08hr    34 embryo 08-10hr    33 embryo 10-12hr    32 embryo 12-14hr    28 embryo 14-16hr    24 embryo 16-18hr    23 embryo 18-20hr    17 embryo 20-22hr    25 embryo 22-24hr    28 larva L1    17 larva L2    11 larva L3 12hr old    7 larva L3 puffstage 1-2    10 larva L3 puffstage 3-6    18 larva L3 puffstage 7-9    29 white prepupae new    23 white prepupae 12hr    28 white prepupae 24hr    24 pupae 2d postWPP    16 pupae 3d postWPP    9 pupae 4d postWPP    12 adult male 01day    10 adult male 05day    12 adult male 30day    11 adult female 01day    17 adult female 05day    29 adult female 30day    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    57 embryo 02-04hr    63 embryo 04-06hr    54 embryo 06-08hr    34 embryo 08-10hr    33 embryo 10-12hr    32 embryo 12-14hr    28 embryo 14-16hr    24 embryo 16-18hr    23 embryo 18-20hr    17 embryo 20-22hr    25 embryo 22-24hr    28 larva L1    17 larva L2    11 larva L3 12hr old    7 larva L3 puffstage 1-2    10 larva L3 puffstage 3-6    18 larva L3 puffstage 7-9    29 white prepupae new    23 white prepupae 12hr    28 white prepupae 24hr    24 pupae 2d postWPP    16 pupae 3d postWPP    9 pupae 4d postWPP    12 adult male 01day    10 adult male 05day    12 adult male 30day    11 adult female 01day    17 adult female 05day    29 adult female 30day    29 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    57 embryo 02-04hr    63 embryo 04-06hr    54 embryo 06-08hr    34 embryo 08-10hr    33 embryo 10-12hr    32 embryo 12-14hr    28 embryo 14-16hr    24 embryo 16-18hr    23 embryo 18-20hr    17 embryo 20-22hr    25 embryo 22-24hr    28 larva L1    17 larva L2    11 larva L3 12hr old    7 larva L3 puffstage 1-2    10 larva L3 puffstage 3-6    18 larva L3 puffstage 7-9    29 white prepupae new    23 white prepupae 12hr    28 white prepupae 24hr    24 pupae 2d postWPP    16 pupae 3d postWPP    9 pupae 4d postWPP    12 adult male 01day    10 adult male 05day    12 adult male 30day    11 adult female 01day    17 adult female 05day    29 adult female 30day    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (57) embryo 02-04hr  (63) embryo 04-06hr  (54) embryo 06-08hr  (34) embryo 08-10hr  (33) embryo 10-12hr  32 embryo 12-14hr  28 embryo 14-16hr    24 embryo 16-18hr    23 embryo 18-20hr    17 embryo 20-22hr    25 embryo 22-24hr  28 larva L1    17 larva L2    11 larva L3 12hr old    7 larva L3 puffstage 1-2    10 larva L3 puffstage 3-6    18 larva L3 puffstage 7-9  29 white prepupae new    23 white prepupae 12hr  28 white prepupae 24hr    24 pupae 2d postWPP    16 pupae 3d postWPP    9 pupae 4d postWPP    12 adult male 01day    10 adult male 05day    12 adult male 30day    11 adult female 01day    17 adult female 05day  29 adult female 30day  29 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    57 embryo 02-04hr    63 embryo 04-06hr    54 embryo 06-08hr    34 embryo 08-10hr    33 embryo 10-12hr    32 embryo 12-14hr    28 embryo 14-16hr    24 embryo 16-18hr    23 embryo 18-20hr    17 embryo 20-22hr    25 embryo 22-24hr    28 larva L1    17 larva L2    11 larva L3 12hr old    7 larva L3 puffstage 1-2    10 larva L3 puffstage 3-6    18 larva L3 puffstage 7-9    29 white prepupae new    23 white prepupae 12hr    28 white prepupae 24hr    24 pupae 2d postWPP    16 pupae 3d postWPP    9 pupae 4d postWPP    12 adult male 01day    10 adult male 05day    12 adult male 30day    11 adult female 01day    17 adult female 05day    29 adult female 30day    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    57 embryo 02-04hr    63 embryo 04-06hr    54 embryo 06-08hr    34 embryo 08-10hr    33 embryo 10-12hr    32 embryo 12-14hr    28 embryo 14-16hr    24 embryo 16-18hr    23 embryo 18-20hr    17 embryo 20-22hr    25 embryo 22-24hr    28 larva L1    17 larva L2    11 larva L3 12hr old    7 larva L3 puffstage 1-2    10 larva L3 puffstage 3-6    18 larva L3 puffstage 7-9    29 white prepupae new    23 white prepupae 12hr    28 white prepupae 24hr    24 pupae 2d postWPP    16 pupae 3d postWPP    9 pupae 4d postWPP    12 adult male 01day    10 adult male 05day    12 adult male 30day    11 adult female 01day    17 adult female 05day    29 adult female 30day    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    68 Schneider line 2 Sg4    26 embryonic 1182-4H    33 embryonic GM2    40 embryonic Kc167    39 embryonic S1    58 embryonic S3    17 leg disc CME L1    22 wing disc CME-W2    35 wing disc ML-DmD8    57 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    43 wing disc ML-DmD21    9 wing disc ML-DmD32    22 haltere disc ML-DmD17-c3    26 eye-antennal disc ML-DmD11    30 antennal disc ML-DmD20-c5    33 mixed discs ML-DmD4-c1    48 CNS ML-DmBG1-c1    17 CNS ML-DmBG2-c2    21 tumorous blood cells mbn2    261 ovary fGS/OSS    9 ovary OSC    32 ovary OSS    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (68) Schneider line 2 Sg4  26 embryonic 1182-4H  (33) embryonic GM2  (40) embryonic Kc167  (39) embryonic S1  (58) embryonic S3    17 leg disc CME L1    22 wing disc CME-W2  (35) wing disc ML-DmD8  (57) wing disc ML-DmD9    20 wing disc ML-DmD16-c3  (43) wing disc ML-DmD21    9 wing disc ML-DmD32    22 haltere disc ML-DmD17-c3  26 eye-antennal disc ML-DmD11  (30) antennal disc ML-DmD20-c5  (33) mixed discs ML-DmD4-c1  (48) CNS ML-DmBG1-c1    17 CNS ML-DmBG2-c2    21 tumorous blood cells mbn2  (261) ovary fGS/OSS    9 ovary OSC  (32) ovary OSS    5 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    68 Schneider line 2 Sg4    26 embryonic 1182-4H    33 embryonic GM2    40 embryonic Kc167    39 embryonic S1    58 embryonic S3    17 leg disc CME L1    22 wing disc CME-W2    35 wing disc ML-DmD8    57 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    43 wing disc ML-DmD21    9 wing disc ML-DmD32    22 haltere disc ML-DmD17-c3    26 eye-antennal disc ML-DmD11    30 antennal disc ML-DmD20-c5    33 mixed discs ML-DmD4-c1    48 CNS ML-DmBG1-c1    17 CNS ML-DmBG2-c2    21 tumorous blood cells mbn2  (261) ovary fGS/OSS    9 ovary OSC    32 ovary OSS    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    68 Schneider line 2 Sg4    26 embryonic 1182-4H    33 embryonic GM2    40 embryonic Kc167    39 embryonic S1    58 embryonic S3    17 leg disc CME L1    22 wing disc CME-W2    35 wing disc ML-DmD8    57 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    43 wing disc ML-DmD21    9 wing disc ML-DmD32    22 haltere disc ML-DmD17-c3    26 eye-antennal disc ML-DmD11    30 antennal disc ML-DmD20-c5    33 mixed discs ML-DmD4-c1    48 CNS ML-DmBG1-c1    17 CNS ML-DmBG2-c2    21 tumorous blood cells mbn2    261 ovary fGS/OSS    9 ovary OSC    32 ovary OSS    5 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    68 Schneider line 2 Sg4    26 embryonic 1182-4H    33 embryonic GM2    40 embryonic Kc167    39 embryonic S1    58 embryonic S3    17 leg disc CME L1    22 wing disc CME-W2    35 wing disc ML-DmD8    57 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    43 wing disc ML-DmD21    9 wing disc ML-DmD32    22 haltere disc ML-DmD17-c3    26 eye-antennal disc ML-DmD11    30 antennal disc ML-DmD20-c5    33 mixed discs ML-DmD4-c1    48 CNS ML-DmBG1-c1    17 CNS ML-DmBG2-c2    21 tumorous blood cells mbn2    261 ovary fGS/OSS    9 ovary OSC    32 ovary OSS    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (68) Schneider line 2 Sg4  26 embryonic 1182-4H  (33) embryonic GM2  (40) embryonic Kc167  (39) embryonic S1  (58) embryonic S3    17 leg disc CME L1    22 wing disc CME-W2  (35) wing disc ML-DmD8  (57) wing disc ML-DmD9    20 wing disc ML-DmD16-c3  (43) wing disc ML-DmD21    9 wing disc ML-DmD32    22 haltere disc ML-DmD17-c3  26 eye-antennal disc ML-DmD11  30 antennal disc ML-DmD20-c5  (33) mixed discs ML-DmD4-c1  (48) CNS ML-DmBG1-c1    17 CNS ML-DmBG2-c2    21 tumorous blood cells mbn2  (261) ovary fGS/OSS    9 ovary OSC  32 ovary OSS    5 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    68 Schneider line 2 Sg4    26 embryonic 1182-4H    33 embryonic GM2    40 embryonic Kc167    39 embryonic S1    58 embryonic S3    17 leg disc CME L1    22 wing disc CME-W2    35 wing disc ML-DmD8    57 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    43 wing disc ML-DmD21    9 wing disc ML-DmD32    22 haltere disc ML-DmD17-c3    26 eye-antennal disc ML-DmD11    30 antennal disc ML-DmD20-c5    33 mixed discs ML-DmD4-c1    48 CNS ML-DmBG1-c1    17 CNS ML-DmBG2-c2    21 tumorous blood cells mbn2  (261) ovary fGS/OSS    9 ovary OSC    32 ovary OSS    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    68 Schneider line 2 Sg4    26 embryonic 1182-4H    33 embryonic GM2    40 embryonic Kc167    39 embryonic S1    58 embryonic S3    17 leg disc CME L1    22 wing disc CME-W2    35 wing disc ML-DmD8    57 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    43 wing disc ML-DmD21    9 wing disc ML-DmD32    22 haltere disc ML-DmD17-c3    26 eye-antennal disc ML-DmD11    30 antennal disc ML-DmD20-c5    33 mixed discs ML-DmD4-c1    48 CNS ML-DmBG1-c1    17 CNS ML-DmBG2-c2    21 tumorous blood cells mbn2    261 ovary fGS/OSS    9 ovary OSC    32 ovary OSS    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    7 cold shock, 4-day adult    4 heat shock, 4-day adult    9 Cadmium 50 mM 6 hrs, larvae L3    5 Cadmium 50 mM 12 hrs, larvae L3    11 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    22 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    32 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    15 Ethanol 5% 3 hrs, larvae L3    5 Ethanol 10% 3 hrs, larvae L3    4 Caffeine 1.5 mg/ml 4 hrs, larvae L3    6 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    18 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    17 Paraquat 10 mM 48 hrs, 4-day adult    11 Rotenone 2 μg 12 hrs, larvae L3    7 Rotenone 8 μg 12 hrs, larvae L3    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    7 cold shock, 4-day adult    4 heat shock, 4-day adult    9 Cadmium 50 mM 6 hrs, larvae L3    5 Cadmium 50 mM 12 hrs, larvae L3    11 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    22 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult  (32) Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    15 Ethanol 5% 3 hrs, larvae L3    5 Ethanol 10% 3 hrs, larvae L3    4 Caffeine 1.5 mg/ml 4 hrs, larvae L3    6 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    18 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    17 Paraquat 10 mM 48 hrs, 4-day adult    11 Rotenone 2 μg 12 hrs, larvae L3    7 Rotenone 8 μg 12 hrs, larvae L3    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    7 cold shock, 4-day adult    4 heat shock, 4-day adult    9 Cadmium 50 mM 6 hrs, larvae L3    5 Cadmium 50 mM 12 hrs, larvae L3    11 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    22 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    32 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    15 Ethanol 5% 3 hrs, larvae L3    5 Ethanol 10% 3 hrs, larvae L3    4 Caffeine 1.5 mg/ml 4 hrs, larvae L3    6 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    18 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    17 Paraquat 10 mM 48 hrs, 4-day adult    11 Rotenone 2 μg 12 hrs, larvae L3    7 Rotenone 8 μg 12 hrs, larvae L3    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    7 cold shock, 4-day adult    4 heat shock, 4-day adult    9 Cadmium 50 mM 6 hrs, larvae L3    5 Cadmium 50 mM 12 hrs, larvae L3    11 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    22 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    32 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    15 Ethanol 5% 3 hrs, larvae L3    5 Ethanol 10% 3 hrs, larvae L3    4 Caffeine 1.5 mg/ml 4 hrs, larvae L3    6 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    18 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    17 Paraquat 10 mM 48 hrs, 4-day adult    11 Rotenone 2 μg 12 hrs, larvae L3    7 Rotenone 8 μg 12 hrs, larvae L3    3 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    7 cold shock, 4-day adult    4 heat shock, 4-day adult    9 Cadmium 50 mM 6 hrs, larvae L3    5 Cadmium 50 mM 12 hrs, larvae L3    11 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    22 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    32 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    15 Ethanol 5% 3 hrs, larvae L3    5 Ethanol 10% 3 hrs, larvae L3    4 Caffeine 1.5 mg/ml 4 hrs, larvae L3    6 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    18 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    17 Paraquat 10 mM 48 hrs, 4-day adult    11 Rotenone 2 μg 12 hrs, larvae L3    7 Rotenone 8 μg 12 hrs, larvae L3    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    7 cold shock, 4-day adult    4 heat shock, 4-day adult    9 Cadmium 50 mM 6 hrs, larvae L3    5 Cadmium 50 mM 12 hrs, larvae L3    11 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    22 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult  32 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    15 Ethanol 5% 3 hrs, larvae L3    5 Ethanol 10% 3 hrs, larvae L3    4 Caffeine 1.5 mg/ml 4 hrs, larvae L3    6 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    18 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    17 Paraquat 10 mM 48 hrs, 4-day adult    11 Rotenone 2 μg 12 hrs, larvae L3    7 Rotenone 8 μg 12 hrs, larvae L3    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    7 cold shock, 4-day adult    4 heat shock, 4-day adult    9 Cadmium 50 mM 6 hrs, larvae L3    5 Cadmium 50 mM 12 hrs, larvae L3    11 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    22 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    32 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    15 Ethanol 5% 3 hrs, larvae L3    5 Ethanol 10% 3 hrs, larvae L3    4 Caffeine 1.5 mg/ml 4 hrs, larvae L3    6 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    18 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    17 Paraquat 10 mM 48 hrs, 4-day adult    11 Rotenone 2 μg 12 hrs, larvae L3    7 Rotenone 8 μg 12 hrs, larvae L3    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    7 cold shock, 4-day adult    4 heat shock, 4-day adult    9 Cadmium 50 mM 6 hrs, larvae L3    5 Cadmium 50 mM 12 hrs, larvae L3    11 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    22 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    32 Zinc 5 mM 12 hrs, larvae L3    4 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    15 Ethanol 5% 3 hrs, larvae L3    5 Ethanol 10% 3 hrs, larvae L3    4 Caffeine 1.5 mg/ml 4 hrs, larvae L3    6 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    18 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    17 Paraquat 10 mM 48 hrs, 4-day adult    11 Rotenone 2 μg 12 hrs, larvae L3    7 Rotenone 8 μg 12 hrs, larvae L3    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_17 mE1_20_mRNA_expression_cluster_03
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0035558 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11357-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable CG11357EY12484 viable, with Scer\GAL4pnr-MD237 CG11357GD2307 Sterility Allele fertile CG11357EY12484 Other Phenotypes Allele learning defective | adult stage CG1135719.47 Phenotype manifest in Allele
Classical Alleles ( 8 )
For All Classical Alleles Show
Allele of CG11357 Class Mutagen Stocks Known lesion CG11357c07045 piggyBac transposase 1 -- CG11357CB-0753-3 1 -- CG11357CB-6029-3 1 -- CG11357EY12484 P-element activity 1 -- CG11357MI00930 1 -- CG11357UM-8210-3 1 -- CG1135719.47 0 Yes CG11357f06786 piggyBac transposase 0 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG11357 Class Mutagen Stocks Known lesion CG11357GD2307 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG11357KK109818 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(3L)Exel7208 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD2307} NA P{KK109818} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EPgy2}CG11357EY12484 NA miscellaneous insertions Mi{MIC}CG11357MI00930 NA P{RS3}CG11357CB-0753-3 NA P{RS3}CG11357CB-6029-3 NA P{RS3}CG11357UM-8210-3 NA PBac{PB}CG11357c07045 NA PBac{WH}CG11357f06786 NA insertion of enhancer trap binary system P{GawB}CG1135719.47 No
Gene Ontology: Function, Process & Cellular Component ( 4 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 4 terms )
Molecular Function
CV term Evidence References
transferase activity, transferring glycosyl groups inferred from sequence or structural similarity with EMBL:Y15062 (Schwientek et al., 2002) UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity inferred from sequence or structural similarity with EMBL:AF029792 (FlyBase, 1992-)
Biological Process
CV term Evidence References
protein glycosylation inferred from electronic annotation with InterPro:IPR002659 (FlyBase Curators et al., 2004-)
Cellular Component
CV term Evidence References
membrane inferred from electronic annotation with InterPro:IPR002659 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG11357 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0035558
Orthologs
OrthoDB Orthologs (42) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6QNNGJ Dipteran inclusive ortholog search EOG6GF3Q4 Insect inclusive ortholog search EOG6M64D3 Arthropod inclusive ortholog search EOG6M9070 Metazoa inclusive ortholog search EOG6SV4Z7
Orthologs in Drosophila Species (EOG6QNNGJ)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG11357     Drosophila simulans   Dsim\GD13851 Y   Drosophila sechellia   Dsec\GM14670 Y   Drosophila erecta   Dere\GG15238 Y   Drosophila yakuba   Dyak\GE21457 Y   Drosophila ananassae   Dana\GF25081 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA10945 Y   Drosophila persimilis   Dper\GL17908 Y   Drosophila willistoni   Dwil\GK16591 Y   Drosophila virilis   Dvir\GJ15510 Y   Drosophila mojavensis   Dmoj\GI12738 Y   Drosophila grimshawi   Dgri\GH15689 Y
Orthologs in non-Drosophila Dipterans (EOG6GF3Q4)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Anopheles gambiae Malaria mosquito  Agam\AGAP006142   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ011278
Orthologs in non-Dipteran Insects (EOG6M64D3)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB51517   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG034494   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH16141   Atta cephalotes Leafcutter ant  Acep\ACEP18370   Camponotus floridanus Florida carpenter ant  Cflo\CFLO17957   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL21405   Linepithema humile Argentine ant  Lhum\LH11417   Pogonomyrmex barbatus Red harvester ant  Pbar\PB11011   Pogonomyrmex barbatus Red harvester ant  Pbar\PB11014   Solenopsis invicta Red fire ant  Sinv\SINV17981   Acyrthosiphon pisum Pea aphid  Apim\ACYPI003210   Bombyx mori Silkmoth  Bmor\BGIBMGA004619   Pediculus humanus Human body louse  Phum\PHUM582210   Tribolium castaneum Red flour beetle  Tcas\TC003968   Tribolium castaneum Red flour beetle  Tcas\TC003970   Tribolium castaneum Red flour beetle  Tcas\TC006904   Tribolium castaneum Red flour beetle  Tcas\TC003969
Orthologs in non-Insect Arthropods (EOG6M9070)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\JGI_V11_250490   Ixodes scapularis Deer tick  Isca\ISCW011715   Ixodes scapularis Deer tick  Isca\ISCW013698
Orthologs in non-Arthropod Metazoa (EOG6SV4Z7)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\C54C8.3   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_021417gn   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_010644gn   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_010645gn   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_000781gn   Danio rerio Zebrafish  Drer\si:dkeyp-98a7.1   Danio rerio Zebrafish  Drer\ENSDARG00000077903   Danio rerio Zebrafish  Drer\b3gnt5b
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD13851 Drosophila sechellia Dsec\GM14670 Drosophila erecta Dere\GG15238 Drosophila yakuba Dyak\GE21457 Drosophila ananassae Dana\GF25081 Drosophila pseudoobscura pseudoobscura Dpse\GA10945 Drosophila persimilis Dper\GL17908 Drosophila willistoni Dwil\GK16591 Drosophila virilis Dvir\GJ15510 Drosophila mojavensis Dmoj\GI12738 Drosophila grimshawi Dgri\GH15689
Stocks & Reagents
Stocks Listed in FlyBase ( 8 )
Bloomington	34403 y1 w*; Mi{MIC}CG11357MI00930 20838 y1 w67c23; P{EPgy2}CG11357EY12484
Harvard	- PBac{PB}CG11357c07045
Kyoto	123313 w1118; P{RS3}CG11357CB-0753-3 123884 w1118; P{RS3}CG11357CB-6029-3 124415 w1118; P{RS3}CG11357UM-8210-3
VDRC	v108467 P{KK109818}VIE-260B v5027 w1118; P{GD2307}v5027
Genomic Clones ( 1 )
	BACR05M07 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 68 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GM04393 RE75106
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT05185 LD01039 LD02655 LD06311 LD08371 LD10554 LD11167 LD13261 LD17761 LD26232 RE02226 RE02974 RE04925 RE04989 RE05654 RE08087 RE11746 RE17680 RE18786 RE23712 RE30957 RE33686 RE34304 RE36240 RE40677 RE70285 RE73553 RE74311 SD19229 SD19567 SD20491
Other clones	1816 35600 44289 51313 57945 73569 78355 527992 528146 557699 CK01.71A.C4 CK01.99A.G1 CK00495 EK056442 EK146218 EK158745 EK159720 EK162057 EK180648 EK207856 EN08213 EN08629 EP02462 RP01206 RP001000462 RP001007035 RP001009866 RP001018062 RP001030323 RP001033227 RP001035377 RP001036962 RP001038261 RP001039660 RP001049425
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0035558 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 38561
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG11357 BcDNA:GM04393 (FlyBase, 1996-)
Additional comments	Source for merge of CG11357 BcDNA:GM04393 was a shared cDNA (date:030728). (FlyBase, 1996-)
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_139659 NM_001104035 NM_001104036 NM_001259697 RefSeq (Proteins) • NP_647916 NP_001097505 NP_001097506 NP_001246626 DDBJ / EMBL / GenBank • AA695734 AAF47918 AAL28432 ABW08464 ABW08465 AFH04297 AW941217 AY060884 BI580871 CL943535 CZ471197 CZ471198 CZ489510 Entrez Gene - A searchable database of RefSeq genes. • 38561 UniProtKB/TrEMBL • Q9VZA6 Q95SA8
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Glycosyl transferase, family 31 (IPR002659)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0035558 DRSC - Results from RNAi screens. • FBgn0035558 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0035558 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11357-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0035558 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 38561 modMine - Data generated by the modENCODE project. • FBgn0035558
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	BcDNA:GM04393   CG11357 (Hollien and Weissman, 2006, Hollien and Weissman, 2006, Quinones-Coello, 2007, Toledano-Katchalski et al., 2007, Liu and Lehmann, 2008, Keleman et al., 2009.8.5, Eddison et al., 2012)
Name Synonym
Secondary FlyBase IDs
	FBgn0047279
References ( 24 )
Generate a list of	All references relating to this gene ( 24 )
List References by type	Research paper  ( 5 ) Supplementary material  ( 6 ) Personal communication to FlyBase  ( 8 ) FlyBase analysis  ( 3 ) Curated genome annotation  ( 2 )
Recent research papers ( 1 )
	Eddison et al., 2012, PLoS ONE 7(12): e51684 A genetic screen for olfactory habituation mutations in Drosophila: analysis of novel foraging alleles and an underlying neural circuit. [FBrf0220425] Show all research papers ...