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Gene Dmel\CG10576

General Information
Symbol	Dmel\CG10576	Species	D. melanogaster
Name		Annotation symbol	CG10576
Feature type	protein_coding_gene	FlyBase ID	FBgn0035630
Gene Model Status	Current	Stock availability	5 publicly available
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	64E6-64E6	Sequence location	3L:5,755,127..5,758,691 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG10576 (FBgn0035630). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: aminopeptidase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: cellular process. 5 alleles are reported. The phenotype of these alleles is annotated with: presumptive embryonic/larval muscle system. It has one annotated transcript and one annotated polypeptide. Protein features are: Peptidase M24, structural domain; Proliferation-associated protein 1; Winged helix-turn-helix transcription repressor DNA-binding domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, during early pupal stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval salivary gland, larval trachea, adult ovary, adult male accessory gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, adult salivary gland, adult spermathecae, adult testis, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1624981_a_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of CG10576. Gene sequence location is 3L:5755127..5758691.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 64E6-64E6   Limits computationally determined from genome sequence between P{PZ}sinu06524 and P{PZ}Bre101640
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG10576 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.44 Gene model reviewed during 5.45 Low-frequency junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG10576-RA FBtr0077121  NM_139727   1723   391
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG10576-PA   FBpp0076827   42.8   391   7.13     NP_647984   AAF50751
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Peptidase M24, structural domain (IPR000994) Proliferation-associated protein 1 (IPR004545) Winged helix-turn-helix DNA-binding domain (IPR011991)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA140842   AA140843   AA142025   AA246854   AA438453   AA438868   AA536404   AA541140   AA694897   AA695100   AA695828   AA695971   AA696194   AA696963   AA802854   AA802876   AA803623   AA941207   AA949764   AA950591   AE014296 AAF50751   AI293521   AI296181   AI519154   AI531189   AI531304   AI532381   AI534955   AI541661   AI543201   AI944680   AQ073872   AW943029   BF489060   BF495502   BF496220   BF496721   BF497156   BG633575   BG635604   BG635612   BG637355   BG640074   BG640340   BI141918   BI163541   BI165102   BI165129   BI216334   BI237047   BI237106   BI237303   BI239484   BI351627   BI351652   BI352231   BI353453   BI353837   BI354052   BI355483   BI355648   BI356863   BI357011   BI358547   BI364210   BI365002   BI365794   BI366663   BI366673   BI366799   BI366845   BI368297   BI370694   BI372886   BI484222   BI485053   BI568665   BI569042   BI569043   BI578358   BI580046   BI612174   BI613001   BI613401   BI615905   BI621604   BI627312   BI630386   BI632640   BI632891   BI633022   BI633165   BI633635   BI635673   BI635960   BI636147   BI638715   BI639753   BP552531   BP556843   BT016100 AAV36985   CA804502   CK605265   CK605266   CK659743   CL528047   CO178702   CO185136   CO263351   CO265397   CO273206   CO274604   CO275766   CO278579   CO279636   CO295746   CO298493   CO302643   CO302968   CO304219   CO319761   CO321857   CO323695   CO333371   CO336543   CO337037   DN153839   EC054192   EC065242   EC067270   EC069805   EC072074   EC072805   EC082168   EC082169   EC083699   EC085826   EC085846   EC197462   EC209228   EC220783   EC228324   EC234857   EC234858   EC237076   EC238048   EC239079   EC244485   EC247429   EC250412   EC251473   EC265096   EC265149   EL880657   EV577779   EV581051   EV587364   EV593372
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VRP2 Q8IQ61 Q5U0Z2
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
mass spectroscopy Stage Tissue/Position (including subcellular localization) Reference day 7 of adulthood -- day 49 of adulthood   adult heart   (Cammarato et al., 2011)
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval salivary gland, larval trachea, adult ovary, adult male accessory gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, adult salivary gland, adult spermathecae, adult testis, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    394.425 Larval Midgut    301.6 Larval Hindgut    394 Larval Malpighian Tubules    199.6 Larval Fat Body    291.1 Larval Salivary Gland    963.5 Larval Trachea    613.975 Larval Carcass    478.9 Adult Head    218.1 Adult Eye    111.75 Adult Brain    174.6 Adult Thoracic-Abdominal Ganglion    128 Adult Crop    239.4 Adult Midgut    432 Adult Hindgut    308.4 Adult Malpighian Tubules    298.3 Adult Fat Body    450.6 Adult Salivary Gland    492.9 Adult Heart    179.8 Adult VirginFemale Spermatheca    243.4 Adult InseminatedFemale Spermatheca    323.3 Adult Ovary    782.2 Adult Testis    417.7 Adult Male Accessory Gland    1149.2 Adult Carcass    259.6 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    394.425 Larval Midgut    301.6 Larval Hindgut    394 Larval Malpighian Tubules    199.6 Larval Fat Body    291.1 Larval Salivary Gland  (963.5) Larval Trachea  (613.975) Larval Carcass    478.9 Adult Head    218.1 Adult Eye    111.75 Adult Brain    174.6 Adult Thoracic-Abdominal Ganglion    128 Adult Crop    239.4 Adult Midgut    432 Adult Hindgut    308.4 Adult Malpighian Tubules    298.3 Adult Fat Body    450.6 Adult Salivary Gland    492.9 Adult Heart    179.8 Adult VirginFemale Spermatheca    243.4 Adult InseminatedFemale Spermatheca    323.3 Adult Ovary  (782.2) Adult Testis    417.7 Adult Male Accessory Gland  (1149.2) Adult Carcass    259.6 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    394.425 Larval Midgut    301.6 Larval Hindgut    394 Larval Malpighian Tubules    199.6 Larval Fat Body    291.1 Larval Salivary Gland    963.5 Larval Trachea    613.975 Larval Carcass    478.9 Adult Head    218.1 Adult Eye    111.75 Adult Brain    174.6 Adult Thoracic-Abdominal Ganglion    128 Adult Crop    239.4 Adult Midgut    432 Adult Hindgut    308.4 Adult Malpighian Tubules    298.3 Adult Fat Body    450.6 Adult Salivary Gland    492.9 Adult Heart    179.8 Adult VirginFemale Spermatheca    243.4 Adult InseminatedFemale Spermatheca    323.3 Adult Ovary    782.2 Adult Testis    417.7 Adult Male Accessory Gland  (1149.2) Adult Carcass    259.6 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    394.425 Larval Midgut    301.6 Larval Hindgut    394 Larval Malpighian Tubules    199.6 Larval Fat Body    291.1 Larval Salivary Gland    963.5 Larval Trachea    613.975 Larval Carcass    478.9 Adult Head    218.1 Adult Eye    111.75 Adult Brain    174.6 Adult Thoracic-Abdominal Ganglion    128 Adult Crop    239.4 Adult Midgut    432 Adult Hindgut    308.4 Adult Malpighian Tubules    298.3 Adult Fat Body    450.6 Adult Salivary Gland    492.9 Adult Heart    179.8 Adult VirginFemale Spermatheca    243.4 Adult InseminatedFemale Spermatheca    323.3 Adult Ovary    782.2 Adult Testis    417.7 Adult Male Accessory Gland    1149.2 Adult Carcass    259.6 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    394.425 Larval Midgut    301.6 Larval Hindgut    394 Larval Malpighian Tubules    199.6 Larval Fat Body    291.1 Larval Salivary Gland    963.5 Larval Trachea    613.975 Larval Carcass    478.9 Adult Head    218.1 Adult Eye    111.75 Adult Brain    174.6 Adult Thoracic-Abdominal Ganglion    128 Adult Crop    239.4 Adult Midgut    432 Adult Hindgut    308.4 Adult Malpighian Tubules    298.3 Adult Fat Body    450.6 Adult Salivary Gland    492.9 Adult Heart    179.8 Adult VirginFemale Spermatheca    243.4 Adult InseminatedFemale Spermatheca    323.3 Adult Ovary    782.2 Adult Testis    417.7 Adult Male Accessory Gland    1149.2 Adult Carcass    259.6 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    394.425 Larval Midgut    301.6 Larval Hindgut    394 Larval Malpighian Tubules    199.6 Larval Fat Body    291.1 Larval Salivary Gland  (963.5) Larval Trachea  613.975 Larval Carcass    478.9 Adult Head    218.1 Adult Eye    111.75 Adult Brain    174.6 Adult Thoracic-Abdominal Ganglion    128 Adult Crop    239.4 Adult Midgut    432 Adult Hindgut    308.4 Adult Malpighian Tubules    298.3 Adult Fat Body    450.6 Adult Salivary Gland    492.9 Adult Heart    179.8 Adult VirginFemale Spermatheca    243.4 Adult InseminatedFemale Spermatheca    323.3 Adult Ovary  782.2 Adult Testis    417.7 Adult Male Accessory Gland  (1149.2) Adult Carcass    259.6 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    394.425 Larval Midgut    301.6 Larval Hindgut    394 Larval Malpighian Tubules    199.6 Larval Fat Body    291.1 Larval Salivary Gland    963.5 Larval Trachea    613.975 Larval Carcass    478.9 Adult Head    218.1 Adult Eye    111.75 Adult Brain    174.6 Adult Thoracic-Abdominal Ganglion    128 Adult Crop    239.4 Adult Midgut    432 Adult Hindgut    308.4 Adult Malpighian Tubules    298.3 Adult Fat Body    450.6 Adult Salivary Gland    492.9 Adult Heart    179.8 Adult VirginFemale Spermatheca    243.4 Adult InseminatedFemale Spermatheca    323.3 Adult Ovary    782.2 Adult Testis    417.7 Adult Male Accessory Gland  1149.2 Adult Carcass    259.6 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    394.425 Larval Midgut    301.6 Larval Hindgut    394 Larval Malpighian Tubules    199.6 Larval Fat Body    291.1 Larval Salivary Gland    963.5 Larval Trachea    613.975 Larval Carcass    478.9 Adult Head    218.1 Adult Eye    111.75 Adult Brain    174.6 Adult Thoracic-Abdominal Ganglion    128 Adult Crop    239.4 Adult Midgut    432 Adult Hindgut    308.4 Adult Malpighian Tubules    298.3 Adult Fat Body    450.6 Adult Salivary Gland    492.9 Adult Heart    179.8 Adult VirginFemale Spermatheca    243.4 Adult InseminatedFemale Spermatheca    323.3 Adult Ovary    782.2 Adult Testis    417.7 Adult Male Accessory Gland    1149.2 Adult Carcass    259.6 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    218.1   NA  Eye    111.75   NA  Brain    174.6   394.425  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    128   NA  Crop    239.4   301.6  Midgut    432   394  Hindgut    308.4   199.6  Malpighian Tubules    298.3   291.1  Fat Body    450.6   963.5  Salivary Gland    492.9   NA  Heart    179.8   613.975  Trachea    NA   NA  VirginFemale Spermatheca    243.4   NA  InseminatedFemale Spermatheca    323.3   NA  Ovary    782.2   NA  Testis    417.7   NA  Male Accessory Gland    1149.2   478.9  Carcass    259.6 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    188 central nervous system, larvae L3    108 central nervous system, pupae P8    29 head, virgin 1-day female    42 head, virgin 4-day female    47 head, virgin 20-day female    59 head, mated 1-day female    37 head, mated 4-day female    69 head, mated 20-day female    45 head, mated 1-day male    28 head, mated 4-day male    40 head, mated 20-day male    48 salivary gland, larvae L3 wandering    31 salivary gland, white prepupae    34 digestive system, larvae L3 wandering    55 digestive system, 1-day adult    61 digestive system, 4-day adult    79 digestive system, 20-day adult    57 fat body, larvae L3 wandering    32 fat body, white prepupae    43 fat body, pupae P8    56 carcass, larvae L3 wandering    140 carcass, 1-day adult    38 carcass, 4-day adult    73 carcass, 20-day adult    53 ovary, virgin 4-day female    287 ovary, mated 4-day female    244 testis, mated 4-day male    208 accessory gland, mated 4-day male    112 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (188) central nervous system, larvae L3  (108) central nervous system, pupae P8  (29) head, virgin 1-day female  (42) head, virgin 4-day female  (47) head, virgin 20-day female  (59) head, mated 1-day female  (37) head, mated 4-day female  (69) head, mated 20-day female  (45) head, mated 1-day male  (28) head, mated 4-day male  (40) head, mated 20-day male  (48) salivary gland, larvae L3 wandering  (31) salivary gland, white prepupae  (34) digestive system, larvae L3 wandering  (55) digestive system, 1-day adult  (61) digestive system, 4-day adult  (79) digestive system, 20-day adult  (57) fat body, larvae L3 wandering  (32) fat body, white prepupae  (43) fat body, pupae P8  (56) carcass, larvae L3 wandering  (140) carcass, 1-day adult  (38) carcass, 4-day adult  (73) carcass, 20-day adult  (53) ovary, virgin 4-day female  (287) ovary, mated 4-day female  (244) testis, mated 4-day male  (208) accessory gland, mated 4-day male  (112) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (188) central nervous system, larvae L3  (108) central nervous system, pupae P8    29 head, virgin 1-day female    42 head, virgin 4-day female    47 head, virgin 20-day female    59 head, mated 1-day female    37 head, mated 4-day female    69 head, mated 20-day female    45 head, mated 1-day male    28 head, mated 4-day male    40 head, mated 20-day male    48 salivary gland, larvae L3 wandering    31 salivary gland, white prepupae    34 digestive system, larvae L3 wandering    55 digestive system, 1-day adult    61 digestive system, 4-day adult    79 digestive system, 20-day adult    57 fat body, larvae L3 wandering    32 fat body, white prepupae    43 fat body, pupae P8    56 carcass, larvae L3 wandering  (140) carcass, 1-day adult    38 carcass, 4-day adult    73 carcass, 20-day adult    53 ovary, virgin 4-day female  (287) ovary, mated 4-day female  (244) testis, mated 4-day male  (208) accessory gland, mated 4-day male  (112) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    188 central nervous system, larvae L3    108 central nervous system, pupae P8    29 head, virgin 1-day female    42 head, virgin 4-day female    47 head, virgin 20-day female    59 head, mated 1-day female    37 head, mated 4-day female    69 head, mated 20-day female    45 head, mated 1-day male    28 head, mated 4-day male    40 head, mated 20-day male    48 salivary gland, larvae L3 wandering    31 salivary gland, white prepupae    34 digestive system, larvae L3 wandering    55 digestive system, 1-day adult    61 digestive system, 4-day adult    79 digestive system, 20-day adult    57 fat body, larvae L3 wandering    32 fat body, white prepupae    43 fat body, pupae P8    56 carcass, larvae L3 wandering    140 carcass, 1-day adult    38 carcass, 4-day adult    73 carcass, 20-day adult    53 ovary, virgin 4-day female    287 ovary, mated 4-day female    244 testis, mated 4-day male    208 accessory gland, mated 4-day male    112 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    188 central nervous system, larvae L3    108 central nervous system, pupae P8    29 head, virgin 1-day female    42 head, virgin 4-day female    47 head, virgin 20-day female    59 head, mated 1-day female    37 head, mated 4-day female    69 head, mated 20-day female    45 head, mated 1-day male    28 head, mated 4-day male    40 head, mated 20-day male    48 salivary gland, larvae L3 wandering    31 salivary gland, white prepupae    34 digestive system, larvae L3 wandering    55 digestive system, 1-day adult    61 digestive system, 4-day adult    79 digestive system, 20-day adult    57 fat body, larvae L3 wandering    32 fat body, white prepupae    43 fat body, pupae P8    56 carcass, larvae L3 wandering    140 carcass, 1-day adult    38 carcass, 4-day adult    73 carcass, 20-day adult    53 ovary, virgin 4-day female    287 ovary, mated 4-day female    244 testis, mated 4-day male    208 accessory gland, mated 4-day male    112 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (188) central nervous system, larvae L3  (108) central nervous system, pupae P8  29 head, virgin 1-day female  (42) head, virgin 4-day female  (47) head, virgin 20-day female  (59) head, mated 1-day female  (37) head, mated 4-day female  (69) head, mated 20-day female  (45) head, mated 1-day male  28 head, mated 4-day male  (40) head, mated 20-day male  (48) salivary gland, larvae L3 wandering  31 salivary gland, white prepupae  (34) digestive system, larvae L3 wandering  (55) digestive system, 1-day adult  (61) digestive system, 4-day adult  (79) digestive system, 20-day adult  (57) fat body, larvae L3 wandering  32 fat body, white prepupae  (43) fat body, pupae P8  (56) carcass, larvae L3 wandering  (140) carcass, 1-day adult  (38) carcass, 4-day adult  (73) carcass, 20-day adult  (53) ovary, virgin 4-day female  (287) ovary, mated 4-day female  (244) testis, mated 4-day male  (208) accessory gland, mated 4-day male  (112) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (188) central nervous system, larvae L3  108 central nervous system, pupae P8    29 head, virgin 1-day female    42 head, virgin 4-day female    47 head, virgin 20-day female    59 head, mated 1-day female    37 head, mated 4-day female    69 head, mated 20-day female    45 head, mated 1-day male    28 head, mated 4-day male    40 head, mated 20-day male    48 salivary gland, larvae L3 wandering    31 salivary gland, white prepupae    34 digestive system, larvae L3 wandering    55 digestive system, 1-day adult    61 digestive system, 4-day adult    79 digestive system, 20-day adult    57 fat body, larvae L3 wandering    32 fat body, white prepupae    43 fat body, pupae P8    56 carcass, larvae L3 wandering  140 carcass, 1-day adult    38 carcass, 4-day adult    73 carcass, 20-day adult    53 ovary, virgin 4-day female  (287) ovary, mated 4-day female  (244) testis, mated 4-day male  (208) accessory gland, mated 4-day male  112 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    188 central nervous system, larvae L3    108 central nervous system, pupae P8    29 head, virgin 1-day female    42 head, virgin 4-day female    47 head, virgin 20-day female    59 head, mated 1-day female    37 head, mated 4-day female    69 head, mated 20-day female    45 head, mated 1-day male    28 head, mated 4-day male    40 head, mated 20-day male    48 salivary gland, larvae L3 wandering    31 salivary gland, white prepupae    34 digestive system, larvae L3 wandering    55 digestive system, 1-day adult    61 digestive system, 4-day adult    79 digestive system, 20-day adult    57 fat body, larvae L3 wandering    32 fat body, white prepupae    43 fat body, pupae P8    56 carcass, larvae L3 wandering    140 carcass, 1-day adult    38 carcass, 4-day adult    73 carcass, 20-day adult    53 ovary, virgin 4-day female    287 ovary, mated 4-day female    244 testis, mated 4-day male    208 accessory gland, mated 4-day male    112 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, during early pupal stages, in adult female stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    286 embryo 02-04hr    59 embryo 04-06hr    105 embryo 06-08hr    180 embryo 08-10hr    230 embryo 10-12hr    335 embryo 12-14hr    234 embryo 14-16hr    208 embryo 16-18hr    159 embryo 18-20hr    109 embryo 20-22hr    169 embryo 22-24hr    154 larva L1    366 larva L2    350 larva L3 12hr old    258 larva L3 puffstage 1-2    133 larva L3 puffstage 3-6    147 larva L3 puffstage 7-9    169 white prepupae new    171 white prepupae 12hr    125 white prepupae 24hr    168 pupae 2d postWPP    145 pupae 3d postWPP    84 pupae 4d postWPP    90 adult male 01day    101 adult male 05day    117 adult male 30day    121 adult female 01day    291 adult female 05day    386 adult female 30day    379 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (286) embryo 02-04hr  (59) embryo 04-06hr  (105) embryo 06-08hr  (180) embryo 08-10hr  (230) embryo 10-12hr  (335) embryo 12-14hr  (234) embryo 14-16hr  (208) embryo 16-18hr  (159) embryo 18-20hr  (109) embryo 20-22hr  (169) embryo 22-24hr  (154) larva L1  (366) larva L2  (350) larva L3 12hr old  (258) larva L3 puffstage 1-2  (133) larva L3 puffstage 3-6  (147) larva L3 puffstage 7-9  (169) white prepupae new  (171) white prepupae 12hr  (125) white prepupae 24hr  (168) pupae 2d postWPP  (145) pupae 3d postWPP  (84) pupae 4d postWPP  (90) adult male 01day  (101) adult male 05day  (117) adult male 30day  (121) adult female 01day  (291) adult female 05day  (386) adult female 30day  (379) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr  (286) embryo 02-04hr    59 embryo 04-06hr  105 embryo 06-08hr  (180) embryo 08-10hr  (230) embryo 10-12hr  (335) embryo 12-14hr  (234) embryo 14-16hr  (208) embryo 16-18hr  (159) embryo 18-20hr  (109) embryo 20-22hr  (169) embryo 22-24hr  (154) larva L1  (366) larva L2  (350) larva L3 12hr old  (258) larva L3 puffstage 1-2  (133) larva L3 puffstage 3-6  (147) larva L3 puffstage 7-9  (169) white prepupae new  (171) white prepupae 12hr  (125) white prepupae 24hr  (168) pupae 2d postWPP  (145) pupae 3d postWPP    84 pupae 4d postWPP    90 adult male 01day  101 adult male 05day  (117) adult male 30day  (121) adult female 01day  (291) adult female 05day  (386) adult female 30day  (379) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    286 embryo 02-04hr    59 embryo 04-06hr    105 embryo 06-08hr    180 embryo 08-10hr    230 embryo 10-12hr    335 embryo 12-14hr    234 embryo 14-16hr    208 embryo 16-18hr    159 embryo 18-20hr    109 embryo 20-22hr    169 embryo 22-24hr    154 larva L1    366 larva L2    350 larva L3 12hr old    258 larva L3 puffstage 1-2    133 larva L3 puffstage 3-6    147 larva L3 puffstage 7-9    169 white prepupae new    171 white prepupae 12hr    125 white prepupae 24hr    168 pupae 2d postWPP    145 pupae 3d postWPP    84 pupae 4d postWPP    90 adult male 01day    101 adult male 05day    117 adult male 30day    121 adult female 01day    291 adult female 05day    386 adult female 30day    379 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    286 embryo 02-04hr    59 embryo 04-06hr    105 embryo 06-08hr    180 embryo 08-10hr    230 embryo 10-12hr    335 embryo 12-14hr    234 embryo 14-16hr    208 embryo 16-18hr    159 embryo 18-20hr    109 embryo 20-22hr    169 embryo 22-24hr    154 larva L1    366 larva L2    350 larva L3 12hr old    258 larva L3 puffstage 1-2    133 larva L3 puffstage 3-6    147 larva L3 puffstage 7-9    169 white prepupae new    171 white prepupae 12hr    125 white prepupae 24hr    168 pupae 2d postWPP    145 pupae 3d postWPP    84 pupae 4d postWPP    90 adult male 01day    101 adult male 05day    117 adult male 30day    121 adult female 01day    291 adult female 05day    386 adult female 30day    379 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (286) embryo 02-04hr  (59) embryo 04-06hr  (105) embryo 06-08hr  (180) embryo 08-10hr  (230) embryo 10-12hr  (335) embryo 12-14hr  (234) embryo 14-16hr  (208) embryo 16-18hr  (159) embryo 18-20hr  (109) embryo 20-22hr  (169) embryo 22-24hr  (154) larva L1  (366) larva L2  (350) larva L3 12hr old  (258) larva L3 puffstage 1-2  (133) larva L3 puffstage 3-6  (147) larva L3 puffstage 7-9  (169) white prepupae new  (171) white prepupae 12hr  (125) white prepupae 24hr  (168) pupae 2d postWPP  (145) pupae 3d postWPP  (84) pupae 4d postWPP  (90) adult male 01day  (101) adult male 05day  (117) adult male 30day  (121) adult female 01day  (291) adult female 05day  (386) adult female 30day  (379) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr  (286) embryo 02-04hr    59 embryo 04-06hr  105 embryo 06-08hr  (180) embryo 08-10hr  (230) embryo 10-12hr  (335) embryo 12-14hr  (234) embryo 14-16hr  (208) embryo 16-18hr  (159) embryo 18-20hr  109 embryo 20-22hr  (169) embryo 22-24hr  (154) larva L1  (366) larva L2  (350) larva L3 12hr old  (258) larva L3 puffstage 1-2  133 larva L3 puffstage 3-6  (147) larva L3 puffstage 7-9  (169) white prepupae new  (171) white prepupae 12hr  125 white prepupae 24hr  (168) pupae 2d postWPP  (145) pupae 3d postWPP    84 pupae 4d postWPP    90 adult male 01day  101 adult male 05day  117 adult male 30day  121 adult female 01day  (291) adult female 05day  (386) adult female 30day  (379) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    286 embryo 02-04hr    59 embryo 04-06hr    105 embryo 06-08hr    180 embryo 08-10hr    230 embryo 10-12hr    335 embryo 12-14hr    234 embryo 14-16hr    208 embryo 16-18hr    159 embryo 18-20hr    109 embryo 20-22hr    169 embryo 22-24hr    154 larva L1    366 larva L2    350 larva L3 12hr old    258 larva L3 puffstage 1-2    133 larva L3 puffstage 3-6    147 larva L3 puffstage 7-9    169 white prepupae new    171 white prepupae 12hr    125 white prepupae 24hr    168 pupae 2d postWPP    145 pupae 3d postWPP    84 pupae 4d postWPP    90 adult male 01day    101 adult male 05day    117 adult male 30day    121 adult female 01day    291 adult female 05day    386 adult female 30day    379 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    248 Schneider line 2 Sg4    464 embryonic 1182-4H    220 embryonic GM2    112 embryonic Kc167    241 embryonic S1    191 embryonic S3    298 leg disc CME L1    385 wing disc CME-W2    241 wing disc ML-DmD8    209 wing disc ML-DmD9    187 wing disc ML-DmD16-c3    239 wing disc ML-DmD21    443 wing disc ML-DmD32    212 haltere disc ML-DmD17-c3    200 eye-antennal disc ML-DmD11    218 antennal disc ML-DmD20-c5    403 mixed discs ML-DmD4-c1    240 CNS ML-DmBG1-c1    289 CNS ML-DmBG2-c2    191 tumorous blood cells mbn2    248 ovary fGS/OSS    135 ovary OSC    67 ovary OSS    71 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (248) Schneider line 2 Sg4  (464) embryonic 1182-4H  (220) embryonic GM2  (112) embryonic Kc167  (241) embryonic S1  (191) embryonic S3  (298) leg disc CME L1  (385) wing disc CME-W2  (241) wing disc ML-DmD8  (209) wing disc ML-DmD9  (187) wing disc ML-DmD16-c3  (239) wing disc ML-DmD21  (443) wing disc ML-DmD32  (212) haltere disc ML-DmD17-c3  (200) eye-antennal disc ML-DmD11  (218) antennal disc ML-DmD20-c5  (403) mixed discs ML-DmD4-c1  (240) CNS ML-DmBG1-c1  (289) CNS ML-DmBG2-c2  (191) tumorous blood cells mbn2  (248) ovary fGS/OSS  (135) ovary OSC  (67) ovary OSS  (71) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  (248) Schneider line 2 Sg4  (464) embryonic 1182-4H  (220) embryonic GM2  (112) embryonic Kc167  (241) embryonic S1  (191) embryonic S3  (298) leg disc CME L1  (385) wing disc CME-W2  (241) wing disc ML-DmD8  (209) wing disc ML-DmD9  (187) wing disc ML-DmD16-c3  (239) wing disc ML-DmD21  (443) wing disc ML-DmD32  (212) haltere disc ML-DmD17-c3  (200) eye-antennal disc ML-DmD11  (218) antennal disc ML-DmD20-c5  (403) mixed discs ML-DmD4-c1  (240) CNS ML-DmBG1-c1  (289) CNS ML-DmBG2-c2  (191) tumorous blood cells mbn2  (248) ovary fGS/OSS  (135) ovary OSC    67 ovary OSS    71 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    248 Schneider line 2 Sg4    464 embryonic 1182-4H    220 embryonic GM2    112 embryonic Kc167    241 embryonic S1    191 embryonic S3    298 leg disc CME L1    385 wing disc CME-W2    241 wing disc ML-DmD8    209 wing disc ML-DmD9    187 wing disc ML-DmD16-c3    239 wing disc ML-DmD21    443 wing disc ML-DmD32    212 haltere disc ML-DmD17-c3    200 eye-antennal disc ML-DmD11    218 antennal disc ML-DmD20-c5    403 mixed discs ML-DmD4-c1    240 CNS ML-DmBG1-c1    289 CNS ML-DmBG2-c2    191 tumorous blood cells mbn2    248 ovary fGS/OSS    135 ovary OSC    67 ovary OSS    71 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    248 Schneider line 2 Sg4    464 embryonic 1182-4H    220 embryonic GM2    112 embryonic Kc167    241 embryonic S1    191 embryonic S3    298 leg disc CME L1    385 wing disc CME-W2    241 wing disc ML-DmD8    209 wing disc ML-DmD9    187 wing disc ML-DmD16-c3    239 wing disc ML-DmD21    443 wing disc ML-DmD32    212 haltere disc ML-DmD17-c3    200 eye-antennal disc ML-DmD11    218 antennal disc ML-DmD20-c5    403 mixed discs ML-DmD4-c1    240 CNS ML-DmBG1-c1    289 CNS ML-DmBG2-c2    191 tumorous blood cells mbn2    248 ovary fGS/OSS    135 ovary OSC    67 ovary OSS    71 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (248) Schneider line 2 Sg4  (464) embryonic 1182-4H  (220) embryonic GM2  (112) embryonic Kc167  (241) embryonic S1  (191) embryonic S3  (298) leg disc CME L1  (385) wing disc CME-W2  (241) wing disc ML-DmD8  (209) wing disc ML-DmD9  (187) wing disc ML-DmD16-c3  (239) wing disc ML-DmD21  (443) wing disc ML-DmD32  (212) haltere disc ML-DmD17-c3  (200) eye-antennal disc ML-DmD11  (218) antennal disc ML-DmD20-c5  (403) mixed discs ML-DmD4-c1  (240) CNS ML-DmBG1-c1  (289) CNS ML-DmBG2-c2  (191) tumorous blood cells mbn2  (248) ovary fGS/OSS  (135) ovary OSC  (67) ovary OSS  (71) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  (248) Schneider line 2 Sg4  (464) embryonic 1182-4H  (220) embryonic GM2  112 embryonic Kc167  (241) embryonic S1  (191) embryonic S3  (298) leg disc CME L1  (385) wing disc CME-W2  (241) wing disc ML-DmD8  (209) wing disc ML-DmD9  (187) wing disc ML-DmD16-c3  (239) wing disc ML-DmD21  (443) wing disc ML-DmD32  (212) haltere disc ML-DmD17-c3  (200) eye-antennal disc ML-DmD11  (218) antennal disc ML-DmD20-c5  (403) mixed discs ML-DmD4-c1  (240) CNS ML-DmBG1-c1  (289) CNS ML-DmBG2-c2  (191) tumorous blood cells mbn2  (248) ovary fGS/OSS  135 ovary OSC    67 ovary OSS    71 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    248 Schneider line 2 Sg4    464 embryonic 1182-4H    220 embryonic GM2    112 embryonic Kc167    241 embryonic S1    191 embryonic S3    298 leg disc CME L1    385 wing disc CME-W2    241 wing disc ML-DmD8    209 wing disc ML-DmD9    187 wing disc ML-DmD16-c3    239 wing disc ML-DmD21    443 wing disc ML-DmD32    212 haltere disc ML-DmD17-c3    200 eye-antennal disc ML-DmD11    218 antennal disc ML-DmD20-c5    403 mixed discs ML-DmD4-c1    240 CNS ML-DmBG1-c1    289 CNS ML-DmBG2-c2    191 tumorous blood cells mbn2    248 ovary fGS/OSS    135 ovary OSC    67 ovary OSS    71 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    67 cold shock, 4-day adult    52 heat shock, 4-day adult    190 Cadmium 50 mM 6 hrs, larvae L3    136 Cadmium 50 mM 12 hrs, larvae L3    97 Cadmium 50 mM 48 hrs, 4-day adult    159 Cadmium 100 mM 48 hrs, 4-day adult    175 Copper 0.5 mM 12 hrs, larvae L3    95 Copper 15 mM 48 hrs, 4-day adult    79 Zinc 5 mM 12 hrs, larvae L3    68 Zinc 4.5 mM 48 hrs, 4-day adult    83 Ethanol 2.5% 3 hrs, larvae L3    238 Ethanol 5% 3 hrs, larvae L3    95 Ethanol 10% 3 hrs, larvae L3    133 Caffeine 1.5 mg/ml 4 hrs, larvae L3    68 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    178 Caffeine 25 mg/ml 48 hrs, 4-day adult    82 Paraquat 5 mM 48 hrs, 4-day adult    185 Paraquat 10 mM 48 hrs, 4-day adult    191 Rotenone 2 μg 12 hrs, larvae L3    156 Rotenone 8 μg 12 hrs, larvae L3    146 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  (67) cold shock, 4-day adult  (52) heat shock, 4-day adult  (190) Cadmium 50 mM 6 hrs, larvae L3  (136) Cadmium 50 mM 12 hrs, larvae L3  (97) Cadmium 50 mM 48 hrs, 4-day adult  (159) Cadmium 100 mM 48 hrs, 4-day adult  (175) Copper 0.5 mM 12 hrs, larvae L3  (95) Copper 15 mM 48 hrs, 4-day adult  (79) Zinc 5 mM 12 hrs, larvae L3  (68) Zinc 4.5 mM 48 hrs, 4-day adult  (83) Ethanol 2.5% 3 hrs, larvae L3  (238) Ethanol 5% 3 hrs, larvae L3  (95) Ethanol 10% 3 hrs, larvae L3  (133) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (68) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (178) Caffeine 25 mg/ml 48 hrs, 4-day adult  (82) Paraquat 5 mM 48 hrs, 4-day adult  (185) Paraquat 10 mM 48 hrs, 4-day adult  (191) Rotenone 2 μg 12 hrs, larvae L3  (156) Rotenone 8 μg 12 hrs, larvae L3  (146) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    67 cold shock, 4-day adult    52 heat shock, 4-day adult  (190) Cadmium 50 mM 6 hrs, larvae L3  (136) Cadmium 50 mM 12 hrs, larvae L3    97 Cadmium 50 mM 48 hrs, 4-day adult  (159) Cadmium 100 mM 48 hrs, 4-day adult  (175) Copper 0.5 mM 12 hrs, larvae L3    95 Copper 15 mM 48 hrs, 4-day adult    79 Zinc 5 mM 12 hrs, larvae L3    68 Zinc 4.5 mM 48 hrs, 4-day adult    83 Ethanol 2.5% 3 hrs, larvae L3  (238) Ethanol 5% 3 hrs, larvae L3    95 Ethanol 10% 3 hrs, larvae L3  (133) Caffeine 1.5 mg/ml 4 hrs, larvae L3    68 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (178) Caffeine 25 mg/ml 48 hrs, 4-day adult    82 Paraquat 5 mM 48 hrs, 4-day adult  (185) Paraquat 10 mM 48 hrs, 4-day adult  (191) Rotenone 2 μg 12 hrs, larvae L3  (156) Rotenone 8 μg 12 hrs, larvae L3  (146) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    67 cold shock, 4-day adult    52 heat shock, 4-day adult    190 Cadmium 50 mM 6 hrs, larvae L3    136 Cadmium 50 mM 12 hrs, larvae L3    97 Cadmium 50 mM 48 hrs, 4-day adult    159 Cadmium 100 mM 48 hrs, 4-day adult    175 Copper 0.5 mM 12 hrs, larvae L3    95 Copper 15 mM 48 hrs, 4-day adult    79 Zinc 5 mM 12 hrs, larvae L3    68 Zinc 4.5 mM 48 hrs, 4-day adult    83 Ethanol 2.5% 3 hrs, larvae L3    238 Ethanol 5% 3 hrs, larvae L3    95 Ethanol 10% 3 hrs, larvae L3    133 Caffeine 1.5 mg/ml 4 hrs, larvae L3    68 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    178 Caffeine 25 mg/ml 48 hrs, 4-day adult    82 Paraquat 5 mM 48 hrs, 4-day adult    185 Paraquat 10 mM 48 hrs, 4-day adult    191 Rotenone 2 μg 12 hrs, larvae L3    156 Rotenone 8 μg 12 hrs, larvae L3    146 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    67 cold shock, 4-day adult    52 heat shock, 4-day adult    190 Cadmium 50 mM 6 hrs, larvae L3    136 Cadmium 50 mM 12 hrs, larvae L3    97 Cadmium 50 mM 48 hrs, 4-day adult    159 Cadmium 100 mM 48 hrs, 4-day adult    175 Copper 0.5 mM 12 hrs, larvae L3    95 Copper 15 mM 48 hrs, 4-day adult    79 Zinc 5 mM 12 hrs, larvae L3    68 Zinc 4.5 mM 48 hrs, 4-day adult    83 Ethanol 2.5% 3 hrs, larvae L3    238 Ethanol 5% 3 hrs, larvae L3    95 Ethanol 10% 3 hrs, larvae L3    133 Caffeine 1.5 mg/ml 4 hrs, larvae L3    68 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    178 Caffeine 25 mg/ml 48 hrs, 4-day adult    82 Paraquat 5 mM 48 hrs, 4-day adult    185 Paraquat 10 mM 48 hrs, 4-day adult    191 Rotenone 2 μg 12 hrs, larvae L3    156 Rotenone 8 μg 12 hrs, larvae L3    146 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  (67) cold shock, 4-day adult  (52) heat shock, 4-day adult  (190) Cadmium 50 mM 6 hrs, larvae L3  (136) Cadmium 50 mM 12 hrs, larvae L3  (97) Cadmium 50 mM 48 hrs, 4-day adult  (159) Cadmium 100 mM 48 hrs, 4-day adult  (175) Copper 0.5 mM 12 hrs, larvae L3  (95) Copper 15 mM 48 hrs, 4-day adult  (79) Zinc 5 mM 12 hrs, larvae L3  (68) Zinc 4.5 mM 48 hrs, 4-day adult  (83) Ethanol 2.5% 3 hrs, larvae L3  (238) Ethanol 5% 3 hrs, larvae L3  (95) Ethanol 10% 3 hrs, larvae L3  (133) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (68) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (178) Caffeine 25 mg/ml 48 hrs, 4-day adult  (82) Paraquat 5 mM 48 hrs, 4-day adult  (185) Paraquat 10 mM 48 hrs, 4-day adult  (191) Rotenone 2 μg 12 hrs, larvae L3  (156) Rotenone 8 μg 12 hrs, larvae L3  (146) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    67 cold shock, 4-day adult    52 heat shock, 4-day adult  (190) Cadmium 50 mM 6 hrs, larvae L3  136 Cadmium 50 mM 12 hrs, larvae L3    97 Cadmium 50 mM 48 hrs, 4-day adult  (159) Cadmium 100 mM 48 hrs, 4-day adult  (175) Copper 0.5 mM 12 hrs, larvae L3    95 Copper 15 mM 48 hrs, 4-day adult    79 Zinc 5 mM 12 hrs, larvae L3    68 Zinc 4.5 mM 48 hrs, 4-day adult    83 Ethanol 2.5% 3 hrs, larvae L3  (238) Ethanol 5% 3 hrs, larvae L3    95 Ethanol 10% 3 hrs, larvae L3  133 Caffeine 1.5 mg/ml 4 hrs, larvae L3    68 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (178) Caffeine 25 mg/ml 48 hrs, 4-day adult    82 Paraquat 5 mM 48 hrs, 4-day adult  (185) Paraquat 10 mM 48 hrs, 4-day adult  (191) Rotenone 2 μg 12 hrs, larvae L3  (156) Rotenone 8 μg 12 hrs, larvae L3  (146) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    67 cold shock, 4-day adult    52 heat shock, 4-day adult    190 Cadmium 50 mM 6 hrs, larvae L3    136 Cadmium 50 mM 12 hrs, larvae L3    97 Cadmium 50 mM 48 hrs, 4-day adult    159 Cadmium 100 mM 48 hrs, 4-day adult    175 Copper 0.5 mM 12 hrs, larvae L3    95 Copper 15 mM 48 hrs, 4-day adult    79 Zinc 5 mM 12 hrs, larvae L3    68 Zinc 4.5 mM 48 hrs, 4-day adult    83 Ethanol 2.5% 3 hrs, larvae L3    238 Ethanol 5% 3 hrs, larvae L3    95 Ethanol 10% 3 hrs, larvae L3    133 Caffeine 1.5 mg/ml 4 hrs, larvae L3    68 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    178 Caffeine 25 mg/ml 48 hrs, 4-day adult    82 Paraquat 5 mM 48 hrs, 4-day adult    185 Paraquat 10 mM 48 hrs, 4-day adult    191 Rotenone 2 μg 12 hrs, larvae L3    156 Rotenone 8 μg 12 hrs, larvae L3    146 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_03 mE1_20_mRNA_expression_cluster_10
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0035630 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG10576-RB
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable CG10576EY07625 viable, with Scer\GAL4pnr-MD237 CG10576GD13429 Sterility Allele fertile CG10576EY07625 Phenotype manifest in Allele presumptive embryonic/larval muscle system, with Scer\GAL4how-24B CG10576EP3271
Classical Alleles ( 2 )
For All Classical Alleles Show
Allele of CG10576 Class Mutagen Stocks Known lesion CG10576EP3271 P-element activity 1 Yes CG10576EY07625 P-element activity 1 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG10576 Class Mutagen Stocks Known lesion CG10576GD13429 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG10576HMS01382 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG10576KK102972 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(3L)Exel6107 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD13429} NA P{KK102972} NA P{TRiP.HMS01382} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EP}CG10576EP3271 NA P{EPgy2}CG10576EY07625 NA
Gene Ontology: Function, Process & Cellular Component ( 2 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 2 terms )
Molecular Function
CV term Evidence References
aminopeptidase activity inferred from sequence or structural similarity with Saccharomyces MAP2 (FlyBase, 1992-)
Biological Process
CV term Evidence References
cellular process inferred from electronic annotation with InterPro:IPR000994 (FlyBase Curators et al., 2004-)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	gene_with_edited_transcript (Graveley et al., 2011) nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
CG10576 - CG2862 experimental knowledge based (Guruharsha et al., 2011) CG10576 - CG30339 anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based (Mintseris et al., 2009.11.23, Guruharsha et al., 2011) CG10576 - CG6321 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG10576 - Pex16 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG10576 - dUTPase experimental knowledge based (Guruharsha et al., 2011)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG10576 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 64106 DroID - A comprehensive database of gene and protein interactions. • FBgn0035630 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 38645
Orthologs
OrthoDB Orthologs (46) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG637S0S Dipteran inclusive ortholog search EOG6G1MR0 Insect inclusive ortholog search EOG6DZ0QS Arthropod inclusive ortholog search EOG6RJDH2 Metazoa inclusive ortholog search EOG6GBM0T
Orthologs in Drosophila Species (EOG637S0S)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG10576     Drosophila simulans   Dsim\GD13178 Y   Drosophila sechellia   Dsec\GM13901 Y   Drosophila erecta   Dere\GG14116 Y   Drosophila yakuba   Dyak\GE20541 Y   Drosophila ananassae   Dana\GF10449 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA10407 Y   Drosophila persimilis   Dper\GL16317 Y   Drosophila willistoni   Dwil\GK16873 Y   Drosophila virilis   Dvir\GJ11948 Y   Drosophila mojavensis   Dmoj\GI13173 Y   Drosophila grimshawi   Dgri\GH15010 Y
Orthologs in non-Drosophila Dipterans (EOG6G1MR0)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL012312   Anopheles gambiae Malaria mosquito  Agam\AGAP005108   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ015389
Orthologs in non-Dipteran Insects (EOG6DZ0QS)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\LOC412221   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG019351   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG028079   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH15904   Atta cephalotes Leafcutter ant  Acep\ACEP10955   Camponotus floridanus Florida carpenter ant  Cflo\CFLO19679   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL22385   Linepithema humile Argentine ant  Lhum\LH23567   Pogonomyrmex barbatus Red harvester ant  Pbar\PB24032   Solenopsis invicta Red fire ant  Sinv\SINV15056   Acyrthosiphon pisum Pea aphid  Apim\ACYPI007642   Acyrthosiphon pisum Pea aphid  Apim\ACYPI082722   Bombyx mori Silkmoth  Bmor\BGIBMGA002493   Pediculus humanus Human body louse  Phum\PHUM050960   Tribolium castaneum Red flour beetle  Tcas\TC004235
Orthologs in non-Insect Arthropods (EOG6RJDH2)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\JGI_V11_46898   Daphnia pulex Water flea  Dpux\COI   Daphnia pulex Water flea  Dpux\Prpsap1   Daphnia pulex Water flea  Dpux\JGI_V11_308181   Ixodes scapularis Deer tick  Isca\ISCW023399
Orthologs in non-Arthropod Metazoa (EOG6GBM0T)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\W08E12.7   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_010630gn   Danio rerio Zebrafish  Drer\pa2g4a   Danio rerio Zebrafish  Drer\pa2g4b   Xenopus tropicalis Western clawed frog  Xtro\pa2g4   Gallus gallus Domestic chicken  Ggal\ENSGALG00000005980   Mus musculus House mouse  Mmus\Pa2g4   Rattus norvegicus Norway rat  Rnor\ENSRNOG00000021751   Rattus norvegicus Norway rat  Rnor\Pa2g4   Homo sapiens Human  Hsap\PA2G4   Homo sapiens Human  Hsap\ENSG00000257411
Human Orthologs (2)
Gene OMIM HGNC Hsap\PA2G4     Hsap\ENSG00000257411
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD13178 Drosophila sechellia Dsec\GM13901 Drosophila erecta Dere\GG14116 Drosophila yakuba Dyak\GE20541 Drosophila ananassae Dana\GF10449 Drosophila pseudoobscura pseudoobscura Dpse\GA10407 Drosophila persimilis Dper\GL16317 Drosophila willistoni Dwil\GK16873 Drosophila virilis Dvir\GJ11948 Drosophila mojavensis Dmoj\GI13173 Drosophila grimshawi Dgri\GH15010
Stocks & Reagents
Stocks Listed in FlyBase ( 5 )
Bloomington	17267 w1118; P{EP}CG10576EP3271 34388 y1 sc* v1; P{TRiP.HMS01382}attP2 16851 y1 w67c23; P{EPgy2}CG10576EY07625
VDRC	v107140 P{KK102972}VIE-260B v28761 w1118; P{GD13429}v28761/CyO
Genomic Clones ( 1 )
	BACR29P05 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 147 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD30448
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT04444 AT09969 AT10625 AT11259 AT24759 GM01749 GM02140 GM04556 GM05251 GM06431 GM06504 GM08809 GM13680 GM15444 GM15532 GM18412 GM23690 GM25328 GM26106 GM31010 GM31743 LD05879 LD12557 LD13246 LD17004 LD20963 LD25216 LD29773 LD38619 LP06685 LP10015 LP17711 RE02963 RE04918 RE04951 RE23433 RE33201 RE33269 RE33512 RE35972 RE43123 RE43349 RE45346 RE49274 RE50217 RE51174 RE52249 RE52260 RE52413 RE52466 RE54245 RE57414 RE60078 RE67287 RE68320 RE72224 RE74167 RH40323 RH40580 RH42050 RH42550 RH45803 RH52971 RH59421 RH68588 SD01252 SD02125 SD02280 SD03875 SD05929 SD09892 SD11017 SD11335 SD13059 SD13068 SD15292 SD15890 SD17092 SD17509 SD17727 SD21073 SD22420 SD26467 SD26787 SD26975 SD27167 SD27773
Other clones	8365 10131 12803 17894 28120 32044 60310 60428 60437 60495 77922 105781 106969 148733 175934 183075 281694 557968 562095 bs04b07 CK01.72B.G6 CK01.105D.C11 CK01.142A.F2 CK00130 CK00496 Dmel_dig_012475_0655_3346 Dmel_dig_014824_0592_1653 Dmel_neb_005232_0130_0524 Dmel_neb_008483_0566_2314 EC29466 EC054192 EC251473 EK057359 EK088312 EK106964 EK110042 EK114610 EK118553 EK130461 EK135535 EK142544 EK173128 EK184622 EK185255 EK186540 EK191156 EK211514 EK244130 EK280541 EK306724 EN12735 EN13710 ESG0113d.B21_H01 FGM219C08 FGM305H01 GM04847 IP10509 RH01255 UT01796
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0035630 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 38645
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG10576 BEST:CK00496 (FlyBase, 1996-)
Additional comments	unsRNA:CG10576-a is encoded in an intron of CG10576. (Graveley et al., 2011) Source for merge of CG10576 BEST:CK00496 was sequence comparison (date:030820). (FlyBase, 1996-)
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_139727 RefSeq (Proteins) • NP_647984 DDBJ / EMBL / GenBank • AA140843 AA950591 AAF50751 AAN12106 AAV36985 AQ073872 AW943029 BT016100 CL528047 Entrez Gene - A searchable database of RefSeq genes. • 38645 UniProtKB/TrEMBL • Q5U0Z2 Q8IQ61 Q9VRP2
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Peptidase M24, structural domain (IPR000994) Proliferation-associated protein 1 (IPR004545) Winged helix-turn-helix DNA-binding domain (IPR011991)
Linkouts
	BioGRID - A database of protein and genetic interactions • 64106 DroID - A comprehensive database of gene and protein interactions. • FBgn0035630 DRSC - Results from RNAi screens. • FBgn0035630 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0035630 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG10576-RB FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0035630 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 38645 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 38645 modMine - Data generated by the modENCODE project. • FBgn0035630
Synonyms & Secondary IDs ( 3 )
Reported As
Symbol Synonym	BEST:CK00496   CG10576 (Huang et al., 2004, Huang et al., 2005, Quinones-Coello, 2007, Takemori and Yamamoto, 2009, Keleman et al., 2009.8.5, Ni et al., 2010.12.1, Graveley et al., 2011, Cammarato et al., 2011)
Name Synonym	proliferation-associated protein (Huang et al., 2004)
Secondary FlyBase IDs
	FBgn0046317
References ( 27 )
Generate a list of	All references relating to this gene ( 27 )
List References by type	Research paper  ( 5 ) Supplementary material  ( 9 ) Personal communication to FlyBase  ( 9 ) FlyBase analysis  ( 2 ) Curated genome annotation  ( 2 )
Recent research papers (0)
	All research papers listed in FlyBase were published before 2011 Show research papers ...