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Gene Dmel\CG10147

General Information
Symbol	Dmel\CG10147	Species	D. melanogaster
Name		Annotation symbol	CG10147
Feature type	protein_coding_gene	FlyBase ID	FBgn0035702
Gene Model Status	Current	Stock availability	4 publicly available
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	65B3-65B3	Sequence location	3L:6,479,697..6,481,524 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG10147 (FBgn0035702). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: zinc ion binding; nucleic acid binding. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Zinc finger, AD-type; Zinc finger, C2H2; Zinc finger, C2H2-like; Zinc finger, C2H2-type/integrase, DNA-binding. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed within 00-06 and 12-18 hour embryonic stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. Comments on Affy2 ProbeSet: ProbeSet 1624039_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG10147. Gene sequence location is 3L:6479697..6481524.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features BKN25528 HFA09706
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 65B3-65B3   Limits computationally determined from genome sequence between P{PZ}l(3)0209402094 and P{lacW}l(3)L4060L4060
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG10147 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG10147-RA FBtr0076987  NM_139789   1768   448
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG10147-PA   FBpp0076696   52.2   448   6.86     NP_648046   AAF50662
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, C2H2 (IPR007087) Zinc finger, AD-type (IPR012934) Zinc finger, C2H2-like (IPR015880) Zinc finger, C2H2-type/integrase, DNA-binding (IPR013087)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014296 AAF50662   BT022207   CO308217   CO314341   CO340712   CZ466399   EC201450   EC245328   EC249536
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VRX0
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0035702    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0035702 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed within 00-06 and 12-18 hour embryonic stages, in adult female stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0035702 expression level Developmental Stage   Expression Level embryo 00-02hr    770 embryo 02-04hr    279 embryo 04-06hr    214 embryo 06-08hr    224 embryo 08-10hr    291 embryo 10-12hr    337 embryo 12-14hr    426 embryo 14-16hr    342 embryo 16-18hr    428 embryo 18-20hr    343 embryo 20-22hr    309 embryo 22-24hr    317 larva L1    200 larva L2    132 larva L3 12hr old    116 larva L3 puffstage 1-2    148 larva L3 puffstage 3-6    188 larva L3 puffstage 7-9    239 white prepupae new    246 white prepupae 12hr    240 white prepupae 24hr    311 pupae 2d postWPP    303 pupae 3d postWPP    197 pupae 4d postWPP    124 adult male 01day    153 adult male 05day    176 adult male 30day    158 adult female 01day    204 adult female 05day    510 adult female 30day    521 Expression Level Scale  None   Extremely low   Very low   Low   Moderate  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (770) embryo 02-04hr  (279) embryo 04-06hr  (214) embryo 06-08hr  (224) embryo 08-10hr  (291) embryo 10-12hr  (337) embryo 12-14hr  (426) embryo 14-16hr  (342) embryo 16-18hr  (428) embryo 18-20hr  (343) embryo 20-22hr  (309) embryo 22-24hr  (317) larva L1  (200) larva L2  (132) larva L3 12hr old  (116) larva L3 puffstage 1-2  (148) larva L3 puffstage 3-6  (188) larva L3 puffstage 7-9  (239) white prepupae new  (246) white prepupae 12hr  (240) white prepupae 24hr  (311) pupae 2d postWPP  (303) pupae 3d postWPP  (197) pupae 4d postWPP  (124) adult male 01day  (153) adult male 05day  (176) adult male 30day  (158) adult female 01day  (204) adult female 05day  (510) adult female 30day  (521) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    770 embryo 02-04hr    279 embryo 04-06hr    214 embryo 06-08hr    224 embryo 08-10hr    291 embryo 10-12hr    337 embryo 12-14hr    426 embryo 14-16hr    342 embryo 16-18hr    428 embryo 18-20hr    343 embryo 20-22hr    309 embryo 22-24hr    317 larva L1    200 larva L2    132 larva L3 12hr old    116 larva L3 puffstage 1-2    148 larva L3 puffstage 3-6    188 larva L3 puffstage 7-9    239 white prepupae new    246 white prepupae 12hr    240 white prepupae 24hr    311 pupae 2d postWPP    303 pupae 3d postWPP    197 pupae 4d postWPP    124 adult male 01day    153 adult male 05day    176 adult male 30day    158 adult female 01day    204 adult female 05day    510 adult female 30day    521 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    770 embryo 02-04hr    279 embryo 04-06hr    214 embryo 06-08hr    224 embryo 08-10hr    291 embryo 10-12hr    337 embryo 12-14hr    426 embryo 14-16hr    342 embryo 16-18hr    428 embryo 18-20hr    343 embryo 20-22hr    309 embryo 22-24hr    317 larva L1    200 larva L2    132 larva L3 12hr old    116 larva L3 puffstage 1-2    148 larva L3 puffstage 3-6    188 larva L3 puffstage 7-9    239 white prepupae new    246 white prepupae 12hr    240 white prepupae 24hr    311 pupae 2d postWPP    303 pupae 3d postWPP    197 pupae 4d postWPP    124 adult male 01day    153 adult male 05day    176 adult male 30day    158 adult female 01day    204 adult female 05day    510 adult female 30day    521 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    770 embryo 02-04hr    279 embryo 04-06hr    214 embryo 06-08hr    224 embryo 08-10hr    291 embryo 10-12hr    337 embryo 12-14hr    426 embryo 14-16hr    342 embryo 16-18hr    428 embryo 18-20hr    343 embryo 20-22hr    309 embryo 22-24hr    317 larva L1    200 larva L2    132 larva L3 12hr old    116 larva L3 puffstage 1-2    148 larva L3 puffstage 3-6    188 larva L3 puffstage 7-9    239 white prepupae new    246 white prepupae 12hr    240 white prepupae 24hr    311 pupae 2d postWPP    303 pupae 3d postWPP    197 pupae 4d postWPP    124 adult male 01day    153 adult male 05day    176 adult male 30day    158 adult female 01day    204 adult female 05day    510 adult female 30day    521 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0035702 expression level Developmental Stage   Expression Level embryo 00-02hr    770 embryo 02-04hr    279 embryo 04-06hr    214 embryo 06-08hr    224 embryo 08-10hr    291 embryo 10-12hr    337 embryo 12-14hr    426 embryo 14-16hr    342 embryo 16-18hr    428 embryo 18-20hr    343 embryo 20-22hr    309 embryo 22-24hr    317 larva L1    200 larva L2    132 larva L3 12hr old    116 larva L3 puffstage 1-2    148 larva L3 puffstage 3-6    188 larva L3 puffstage 7-9    239 white prepupae new    246 white prepupae 12hr    240 white prepupae 24hr    311 pupae 2d postWPP    303 pupae 3d postWPP    197 pupae 4d postWPP    124 adult male 01day    153 adult male 05day    176 adult male 30day    158 adult female 01day    204 adult female 05day    510 adult female 30day    521 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (770) embryo 02-04hr  (279) embryo 04-06hr  (214) embryo 06-08hr  (224) embryo 08-10hr  (291) embryo 10-12hr  (337) embryo 12-14hr  (426) embryo 14-16hr  (342) embryo 16-18hr  (428) embryo 18-20hr  (343) embryo 20-22hr  (309) embryo 22-24hr  (317) larva L1  (200) larva L2  132 larva L3 12hr old  116 larva L3 puffstage 1-2  (148) larva L3 puffstage 3-6  (188) larva L3 puffstage 7-9  (239) white prepupae new  (246) white prepupae 12hr  (240) white prepupae 24hr  (311) pupae 2d postWPP  (303) pupae 3d postWPP  (197) pupae 4d postWPP  124 adult male 01day  (153) adult male 05day  (176) adult male 30day  (158) adult female 01day  (204) adult female 05day  (510) adult female 30day  (521) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    770 embryo 02-04hr    279 embryo 04-06hr    214 embryo 06-08hr    224 embryo 08-10hr    291 embryo 10-12hr    337 embryo 12-14hr    426 embryo 14-16hr    342 embryo 16-18hr    428 embryo 18-20hr    343 embryo 20-22hr    309 embryo 22-24hr    317 larva L1    200 larva L2    132 larva L3 12hr old    116 larva L3 puffstage 1-2    148 larva L3 puffstage 3-6    188 larva L3 puffstage 7-9    239 white prepupae new    246 white prepupae 12hr    240 white prepupae 24hr    311 pupae 2d postWPP    303 pupae 3d postWPP    197 pupae 4d postWPP    124 adult male 01day    153 adult male 05day    176 adult male 30day    158 adult female 01day    204 adult female 05day    510 adult female 30day    521 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    770 embryo 02-04hr    279 embryo 04-06hr    214 embryo 06-08hr    224 embryo 08-10hr    291 embryo 10-12hr    337 embryo 12-14hr    426 embryo 14-16hr    342 embryo 16-18hr    428 embryo 18-20hr    343 embryo 20-22hr    309 embryo 22-24hr    317 larva L1    200 larva L2    132 larva L3 12hr old    116 larva L3 puffstage 1-2    148 larva L3 puffstage 3-6    188 larva L3 puffstage 7-9    239 white prepupae new    246 white prepupae 12hr    240 white prepupae 24hr    311 pupae 2d postWPP    303 pupae 3d postWPP    197 pupae 4d postWPP    124 adult male 01day    153 adult male 05day    176 adult male 30day    158 adult female 01day    204 adult female 05day    510 adult female 30day    521 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    770 embryo 02-04hr    279 embryo 04-06hr    214 embryo 06-08hr    224 embryo 08-10hr    291 embryo 10-12hr    337 embryo 12-14hr    426 embryo 14-16hr    342 embryo 16-18hr    428 embryo 18-20hr    343 embryo 20-22hr    309 embryo 22-24hr    317 larva L1    200 larva L2    132 larva L3 12hr old    116 larva L3 puffstage 1-2    148 larva L3 puffstage 3-6    188 larva L3 puffstage 7-9    239 white prepupae new    246 white prepupae 12hr    240 white prepupae 24hr    311 pupae 2d postWPP    303 pupae 3d postWPP    197 pupae 4d postWPP    124 adult male 01day    153 adult male 05day    176 adult male 30day    158 adult female 01day    204 adult female 05day    510 adult female 30day    521 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0035702    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0035702 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0035702 expression level Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut    5.5 Larval Hindgut no informative data Larval Malpighian Tubules no informative data Larval Fat Body    6.8 Larval Salivary Gland    6.8 Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain    31.9 Adult Thoracic-Abdominal Ganglion    9.5 Adult Crop    49.4 Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules    7 Adult Fat Body    8.3 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca    7.1 Adult InseminatedFemale Spermatheca    2.5 Adult Ovary    36.5 Adult Testis    3.3 Adult Male Accessory Gland    5.1 Adult Carcass no informative data Expression Level Scale  None   Low  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut    5.5 Larval Hindgut no informative data Larval Malpighian Tubules no informative data Larval Fat Body    6.8 Larval Salivary Gland    6.8 Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain    31.9 Adult Thoracic-Abdominal Ganglion    9.5 Adult Crop    49.4 Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules    7 Adult Fat Body    8.3 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca    7.1 Adult InseminatedFemale Spermatheca    2.5 Adult Ovary    36.5 Adult Testis    3.3 Adult Male Accessory Gland    5.1 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut    5.5 Larval Hindgut no informative data Larval Malpighian Tubules no informative data Larval Fat Body    6.8 Larval Salivary Gland    6.8 Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain    31.9 Adult Thoracic-Abdominal Ganglion    9.5 Adult Crop    49.4 Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules    7 Adult Fat Body    8.3 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca    7.1 Adult InseminatedFemale Spermatheca    2.5 Adult Ovary    36.5 Adult Testis    3.3 Adult Male Accessory Gland    5.1 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut    5.5 Larval Hindgut no informative data Larval Malpighian Tubules no informative data Larval Fat Body    6.8 Larval Salivary Gland    6.8 Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain    31.9 Adult Thoracic-Abdominal Ganglion    9.5 Adult Crop    49.4 Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules    7 Adult Fat Body    8.3 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca    7.1 Adult InseminatedFemale Spermatheca    2.5 Adult Ovary    36.5 Adult Testis    3.3 Adult Male Accessory Gland    5.1 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0035702 expression level Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut    5.5 Larval Hindgut no informative data Larval Malpighian Tubules no informative data Larval Fat Body    6.8 Larval Salivary Gland    6.8 Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain    31.9 Adult Thoracic-Abdominal Ganglion    9.5 Adult Crop    49.4 Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules    7 Adult Fat Body    8.3 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca    7.1 Adult InseminatedFemale Spermatheca    2.5 Adult Ovary    36.5 Adult Testis    3.3 Adult Male Accessory Gland    5.1 Adult Carcass no informative data Expression Level Scale  None   Low  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut    5.5 Larval Hindgut no informative data Larval Malpighian Tubules no informative data Larval Fat Body    6.8 Larval Salivary Gland    6.8 Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain    31.9 Adult Thoracic-Abdominal Ganglion    9.5 Adult Crop    49.4 Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules    7 Adult Fat Body    8.3 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca    7.1 Adult InseminatedFemale Spermatheca    2.5 Adult Ovary    36.5 Adult Testis    3.3 Adult Male Accessory Gland    5.1 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut    5.5 Larval Hindgut no informative data Larval Malpighian Tubules no informative data Larval Fat Body    6.8 Larval Salivary Gland    6.8 Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain    31.9 Adult Thoracic-Abdominal Ganglion    9.5 Adult Crop    49.4 Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules    7 Adult Fat Body    8.3 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca    7.1 Adult InseminatedFemale Spermatheca    2.5 Adult Ovary    36.5 Adult Testis    3.3 Adult Male Accessory Gland    5.1 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut    5.5 Larval Hindgut no informative data Larval Malpighian Tubules no informative data Larval Fat Body    6.8 Larval Salivary Gland    6.8 Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain    31.9 Adult Thoracic-Abdominal Ganglion    9.5 Adult Crop    49.4 Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules    7 Adult Fat Body    8.3 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca    7.1 Adult InseminatedFemale Spermatheca    2.5 Adult Ovary    36.5 Adult Testis    3.3 Adult Male Accessory Gland    5.1 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut     Larval Hindgut no informative data Larval Malpighian Tubules no informative data Larval Fat Body     Larval Salivary Gland     Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass no informative data FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    no informative data   NA  Eye    no informative data   NA  Brain    31.9   no informative data  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    9.5   NA  Crop    49.4   5.5  Midgut    no informative data   no informative data  Hindgut    no informative data   no informative data  Malpighian Tubules    7   6.8  Fat Body    8.3   6.8  Salivary Gland    no informative data   NA  Heart    no informative data   no informative data  Trachea    NA   NA  VirginFemale Spermatheca    7.1   NA  InseminatedFemale Spermatheca    2.5   NA  Ovary    36.5   NA  Testis    3.3   NA  Male Accessory Gland    5.1   no informative data  Carcass    no informative data modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_01
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0035702 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG10147-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG10147GD6880 Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of CG10147 Class Mutagen Stocks Known lesion CG10147c00358 piggyBac transposase 1 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG10147 Class Mutagen Stocks Known lesion CG10147GD6880 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG10147JF02234 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG10147KK104568 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD6880} NA P{KK104568} NA P{TRiP.JF02234} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions PBac{PB}CG10147c00358 NA
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
nucleic acid binding inferred from electronic annotation with InterPro:IPR013087 (FlyBase Curators et al., 2004-) zinc ion binding inferred from electronic annotation with InterPro:IPR007087, InterPro:IPR012934, InterPro:IPR015880 (FlyBase Curators et al., 2004-)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
nucleus inferred from electronic annotation with InterPro:IPR012934 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG10147 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 64185 DroID - A comprehensive database of gene and protein interactions. • FBgn0035702 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 38733
Orthologs
Genome-wide drosophilid orthologs	Dana\GF10900 Dere\GG14057 Dgri\GH16274 Dmoj\GI13212 Dper\GL22515 Dpse\GA24525 Dsec\GM13839 Dsim\GD13125 Dvir\GJ11987 Dwil\GK21197 Dyak\GE20482
Curated drosophilid orthologs	Dpse\GA10110
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL014112-PA Aedes aegypti (mosquito) AAEL014254-PA Aedes aegypti (mosquito) AGAP010882-PA Anopheles gambiae (mosquito) LOC_Os02g02424.1 Oryza sativa (asian rice) LOC_Os05g03020.1 Oryza sativa (asian rice) 287860 Populus trichocarpa (black cottonwood) 5060011 Sorghum bicolor (sorghum) TA17985 Theileria annulata (apicomplexan parasite) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0237797 FBgn0223189 FBgn0199239 FBgn0199237 FBgn0184847 FBgn0168770 FBgn0245924 FBgn0245916 FBgn0160107 FBgn0135969 FBgn0135968 FBgn0123745 FBgn0106319 FBgn0087940 CPIJ004462 AAEL014254 AAEL014112
Stocks & Reagents
Stocks Listed in FlyBase ( 4 )
Bloomington	31943 y1 v1; P{TRiP.JF02234}attP2
Harvard	- PBac{PB}CG10147c00358
VDRC	v107867 P{KK104568}VIE-260B v31183 w1118; P{GD6880}v31183
Genomic Clones ( 2 )
	BACR26E20 BACR30I05 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 7 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	IP01005
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones	43100 76575 153350 EK235848 EK257024 EP11202
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0035702 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 38733
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_139789 RefSeq (Proteins) • NP_648046 DDBJ / EMBL / GenBank • AAF50662 CZ466399 Entrez Gene - A searchable database of RefSeq genes. • 38733 UniProtKB/TrEMBL • Q9VRX0
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, C2H2 (IPR007087) Zinc finger, AD-type (IPR012934) Zinc finger, C2H2-like (IPR015880) Zinc finger, C2H2-type/integrase, DNA-binding (IPR013087)
Linkouts
	BioGRID - A database of protein and genetic interactions • 64185 DroID - A comprehensive database of gene and protein interactions. • FBgn0035702 DRSC - Results from RNAi screens. • FBgn0035702 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0035702 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG10147-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0035702 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 38733 InParanoid A subset of ortholog calls from InParanoid. • AAEL014112-PA Aedes aegypti (mosquito) AAEL014254-PA Aedes aegypti (mosquito) AGAP010882-PA Anopheles gambiae (mosquito) LOC_Os02g02424.1 Oryza sativa (asian rice) LOC_Os05g03020.1 Oryza sativa (asian rice) 287860 Populus trichocarpa (black cottonwood) 5060011 Sorghum bicolor (sorghum) TA17985 Theileria annulata (apicomplexan parasite) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 38733 modMine - Data generated by the modENCODE project. • FBgn0035702 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0237797 FBgn0223189 FBgn0199239 FBgn0199237 FBgn0184847 FBgn0168770 FBgn0245924 FBgn0245916 FBgn0160107 FBgn0135969 FBgn0135968 FBgn0123745 FBgn0106319 FBgn0087940 CPIJ004462 AAEL014254 AAEL014112
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG10147 (Hoskins et al., 2005, Keleman et al., 2009.8.5, Perkins et al., 2009)
Name Synonym
Secondary FlyBase IDs
References ( 14 )
Research paper	Hoskins et al., 2005, Nucleic Acids Res. 33(21): e185 Rapid and efficient cDNA library screening by self-ligation of inverse PCR products (SLIP). [FBrf0191341]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Perkins et al., 2009, Update to TRiP stock collection. Update to TRiP stock collection. [FBrf0208864] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
FlyBase analysis	FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. Genomic mapping of Exelixis insertion collection. [FBrf0184340] Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]
Curated genome annotation	Li, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126682]