A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\CG10627

General Information
SymbolDmel\CG10627SpeciesD. melanogaster
NameAnnotation symbolCG10627
Feature typeprotein_coding_geneFlyBase IDFBgn0036298
Gene Model StatusCurrent Stock availability 6 publicly available
Genomic Location
Chromosome (arm)3LRecombination map
Cytogenetic map69C4-69C4Sequence location3L:12,520,314..12,523,304 [-]

Genomic Maps

GBrowse View Help
modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
This gene is referred to in FlyBase by the symbol Dmel\CG10627 (FBgn0036298). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: phosphoacetylglucosamine mutase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: carbohydrate metabolic process. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Alpha-D-phosphohexomutase, C-terminal; Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, conserved site; Phosphoacetylglucosamine mutase. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 12-18 embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult organs/tissues expressed at moderate or high levels. Expression at high levels in the following post-embryonic organs or tissues: larval/adult midgut, larval/adult Malpighian tubules, larval salivary gland, larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, larval/adult hindgut, adult heart, larval/adult fat body, adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1638994_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG10627. Gene sequence location is 3L:12520314..12523304.

hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
69C4-69C4  
Limits computationally determined from genome sequence between P{PZ}l(3)0508805088 and P{PZ}l(3)0692406924  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\CG10627 for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0075968 FBtr0075967 FBtr0075966 FBpp0075700 FBpp0075699 FBpp0075698 FBti0045600 FBti0099891 FBti0016473 FBti0038792 FBti0126620 FBti0074943 FBti0125662 FBti0041194 FBti0046613
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0075967
  2236
  549
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0075699  
60.6  
549  
6.21  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view eIF-2beta-RA CG10627-RA Tsf2-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0036298


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0036298
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 12-18 embryonic stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0036298 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 5962
embryo 02-04hr
 
 7079
embryo 04-06hr
 
 6565
embryo 06-08hr
 
 6328
embryo 08-10hr
 
 5950
embryo 10-12hr
 
 8749
embryo 12-14hr
 
 5686
embryo 14-16hr
 
 12084
embryo 16-18hr
 
 7351
embryo 18-20hr
 
 3505
embryo 20-22hr
 
 2073
embryo 22-24hr
 
 2151
larva L1
 
 3543
larva L2
 
 5611
larva L3 12hr old
 
 5629
larva L3 puffstage 1-2
 
 3283
larva L3 puffstage 3-6
 
 3244
larva L3 puffstage 7-9
 
 2699
white prepupae new
 
 3038
white prepupae 12hr
 
 2524
white prepupae 24hr
 
 2396
pupae 2d postWPP
 
 4876
pupae 3d postWPP
 
 1950
pupae 4d postWPP
 
 1901
adult male 01day
 
 1576
adult male 05day
 
 1344
adult male 30day
 
 1593
adult female 01day
 
 4661
adult female 05day
 
 4081
adult female 30day
 
 4225
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (5962)
embryo 02-04hr
 (7079)
embryo 04-06hr
 (6565)
embryo 06-08hr
 (6328)
embryo 08-10hr
 (5950)
embryo 10-12hr
 (8749)
embryo 12-14hr
 (5686)
embryo 14-16hr
 (12084)
embryo 16-18hr
 (7351)
embryo 18-20hr
 (3505)
embryo 20-22hr
 (2073)
embryo 22-24hr
 (2151)
larva L1
 (3543)
larva L2
 (5611)
larva L3 12hr old
 (5629)
larva L3 puffstage 1-2
 (3283)
larva L3 puffstage 3-6
 (3244)
larva L3 puffstage 7-9
 (2699)
white prepupae new
 (3038)
white prepupae 12hr
 (2524)
white prepupae 24hr
 (2396)
pupae 2d postWPP
 (4876)
pupae 3d postWPP
 (1950)
pupae 4d postWPP
 (1901)
adult male 01day
 (1576)
adult male 05day
 (1344)
adult male 30day
 (1593)
adult female 01day
 (4661)
adult female 05day
 (4081)
adult female 30day
 (4225)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (5962)
embryo 02-04hr
 (7079)
embryo 04-06hr
 (6565)
embryo 06-08hr
 (6328)
embryo 08-10hr
 (5950)
embryo 10-12hr
 (8749)
embryo 12-14hr
 (5686)
embryo 14-16hr
 (12084)
embryo 16-18hr
 (7351)
embryo 18-20hr
 (3505)
embryo 20-22hr
 (2073)
embryo 22-24hr
 (2151)
larva L1
 (3543)
larva L2
 (5611)
larva L3 12hr old
 (5629)
larva L3 puffstage 1-2
 (3283)
larva L3 puffstage 3-6
 (3244)
larva L3 puffstage 7-9
 (2699)
white prepupae new
 (3038)
white prepupae 12hr
 (2524)
white prepupae 24hr
 (2396)
pupae 2d postWPP
 (4876)
pupae 3d postWPP
 (1950)
pupae 4d postWPP
 (1901)
adult male 01day
 (1576)
adult male 05day
 
 1344
adult male 30day
 (1593)
adult female 01day
 (4661)
adult female 05day
 (4081)
adult female 30day
 (4225)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 5962
embryo 02-04hr
 
 7079
embryo 04-06hr
 
 6565
embryo 06-08hr
 
 6328
embryo 08-10hr
 
 5950
embryo 10-12hr
 
 8749
embryo 12-14hr
 
 5686
embryo 14-16hr
 (12084)
embryo 16-18hr
 
 7351
embryo 18-20hr
 
 3505
embryo 20-22hr
 
 2073
embryo 22-24hr
 
 2151
larva L1
 
 3543
larva L2
 
 5611
larva L3 12hr old
 
 5629
larva L3 puffstage 1-2
 
 3283
larva L3 puffstage 3-6
 
 3244
larva L3 puffstage 7-9
 
 2699
white prepupae new
 
 3038
white prepupae 12hr
 
 2524
white prepupae 24hr
 
 2396
pupae 2d postWPP
 
 4876
pupae 3d postWPP
 
 1950
pupae 4d postWPP
 
 1901
adult male 01day
 
 1576
adult male 05day
 
 1344
adult male 30day
 
 1593
adult female 01day
 
 4661
adult female 05day
 
 4081
adult female 30day
 
 4225
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 5962
embryo 02-04hr
 
 7079
embryo 04-06hr
 
 6565
embryo 06-08hr
 
 6328
embryo 08-10hr
 
 5950
embryo 10-12hr
 
 8749
embryo 12-14hr
 
 5686
embryo 14-16hr
 
 12084
embryo 16-18hr
 
 7351
embryo 18-20hr
 
 3505
embryo 20-22hr
 
 2073
embryo 22-24hr
 
 2151
larva L1
 
 3543
larva L2
 
 5611
larva L3 12hr old
 
 5629
larva L3 puffstage 1-2
 
 3283
larva L3 puffstage 3-6
 
 3244
larva L3 puffstage 7-9
 
 2699
white prepupae new
 
 3038
white prepupae 12hr
 
 2524
white prepupae 24hr
 
 2396
pupae 2d postWPP
 
 4876
pupae 3d postWPP
 
 1950
pupae 4d postWPP
 
 1901
adult male 01day
 
 1576
adult male 05day
 
 1344
adult male 30day
 
 1593
adult female 01day
 
 4661
adult female 05day
 
 4081
adult female 30day
 
 4225
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0036298 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 5962
embryo 02-04hr
 
 7079
embryo 04-06hr
 
 6565
embryo 06-08hr
 
 6328
embryo 08-10hr
 
 5950
embryo 10-12hr
 
 8749
embryo 12-14hr
 
 5686
embryo 14-16hr
 
 12084
embryo 16-18hr
 
 7351
embryo 18-20hr
 
 3505
embryo 20-22hr
 
 2073
embryo 22-24hr
 
 2151
larva L1
 
 3543
larva L2
 
 5611
larva L3 12hr old
 
 5629
larva L3 puffstage 1-2
 
 3283
larva L3 puffstage 3-6
 
 3244
larva L3 puffstage 7-9
 
 2699
white prepupae new
 
 3038
white prepupae 12hr
 
 2524
white prepupae 24hr
 
 2396
pupae 2d postWPP
 
 4876
pupae 3d postWPP
 
 1950
pupae 4d postWPP
 
 1901
adult male 01day
 
 1576
adult male 05day
 
 1344
adult male 30day
 
 1593
adult female 01day
 
 4661
adult female 05day
 
 4081
adult female 30day
 
 4225
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (5962)
embryo 02-04hr
 (7079)
embryo 04-06hr
 (6565)
embryo 06-08hr
 (6328)
embryo 08-10hr
 (5950)
embryo 10-12hr
 (8749)
embryo 12-14hr
 (5686)
embryo 14-16hr
 (12084)
embryo 16-18hr
 (7351)
embryo 18-20hr
 (3505)
embryo 20-22hr
 (2073)
embryo 22-24hr
 (2151)
larva L1
 (3543)
larva L2
 (5611)
larva L3 12hr old
 (5629)
larva L3 puffstage 1-2
 (3283)
larva L3 puffstage 3-6
 (3244)
larva L3 puffstage 7-9
 (2699)
white prepupae new
 (3038)
white prepupae 12hr
 (2524)
white prepupae 24hr
 (2396)
pupae 2d postWPP
 (4876)
pupae 3d postWPP
 (1950)
pupae 4d postWPP
 (1901)
adult male 01day
 (1576)
adult male 05day
 (1344)
adult male 30day
 (1593)
adult female 01day
 (4661)
adult female 05day
 (4081)
adult female 30day
 (4225)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (5962)
embryo 02-04hr
 (7079)
embryo 04-06hr
 (6565)
embryo 06-08hr
 (6328)
embryo 08-10hr
 (5950)
embryo 10-12hr
 (8749)
embryo 12-14hr
 (5686)
embryo 14-16hr
 (12084)
embryo 16-18hr
 (7351)
embryo 18-20hr
 (3505)
embryo 20-22hr
 2073
embryo 22-24hr
 2151
larva L1
 (3543)
larva L2
 (5611)
larva L3 12hr old
 (5629)
larva L3 puffstage 1-2
 (3283)
larva L3 puffstage 3-6
 (3244)
larva L3 puffstage 7-9
 (2699)
white prepupae new
 (3038)
white prepupae 12hr
 (2524)
white prepupae 24hr
 2396
pupae 2d postWPP
 (4876)
pupae 3d postWPP
 1950
pupae 4d postWPP
 1901
adult male 01day
 1576
adult male 05day
 
 1344
adult male 30day
 1593
adult female 01day
 (4661)
adult female 05day
 (4081)
adult female 30day
 (4225)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 5962
embryo 02-04hr
 
 7079
embryo 04-06hr
 
 6565
embryo 06-08hr
 
 6328
embryo 08-10hr
 
 5950
embryo 10-12hr
 
 8749
embryo 12-14hr
 
 5686
embryo 14-16hr
 12084
embryo 16-18hr
 
 7351
embryo 18-20hr
 
 3505
embryo 20-22hr
 
 2073
embryo 22-24hr
 
 2151
larva L1
 
 3543
larva L2
 
 5611
larva L3 12hr old
 
 5629
larva L3 puffstage 1-2
 
 3283
larva L3 puffstage 3-6
 
 3244
larva L3 puffstage 7-9
 
 2699
white prepupae new
 
 3038
white prepupae 12hr
 
 2524
white prepupae 24hr
 
 2396
pupae 2d postWPP
 
 4876
pupae 3d postWPP
 
 1950
pupae 4d postWPP
 
 1901
adult male 01day
 
 1576
adult male 05day
 
 1344
adult male 30day
 
 1593
adult female 01day
 
 4661
adult female 05day
 
 4081
adult female 30day
 
 4225
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 5962
embryo 02-04hr
 
 7079
embryo 04-06hr
 
 6565
embryo 06-08hr
 
 6328
embryo 08-10hr
 
 5950
embryo 10-12hr
 
 8749
embryo 12-14hr
 
 5686
embryo 14-16hr
 
 12084
embryo 16-18hr
 
 7351
embryo 18-20hr
 
 3505
embryo 20-22hr
 
 2073
embryo 22-24hr
 
 2151
larva L1
 
 3543
larva L2
 
 5611
larva L3 12hr old
 
 5629
larva L3 puffstage 1-2
 
 3283
larva L3 puffstage 3-6
 
 3244
larva L3 puffstage 7-9
 
 2699
white prepupae new
 
 3038
white prepupae 12hr
 
 2524
white prepupae 24hr
 
 2396
pupae 2d postWPP
 
 4876
pupae 3d postWPP
 
 1950
pupae 4d postWPP
 
 1901
adult male 01day
 
 1576
adult male 05day
 
 1344
adult male 30day
 
 1593
adult female 01day
 
 4661
adult female 05day
 
 4081
adult female 30day
 
 4225
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0036298


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0036298
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult organs/tissues expressed at moderate or high levels. Expression at high levels in the following post-embryonic organs or tissues: larval/adult midgut, larval/adult Malpighian tubules, larval salivary gland, larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, larval/adult hindgut, adult heart, larval/adult fat body, adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0036298 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 250.775
Larval Midgut
 
 612.9
Larval Hindgut
 
 479.8
Larval Malpighian Tubules
 
 758.9
Larval Fat Body
 
 198.8
Larval Salivary Gland
 
 950.4
Larval Trachea
 
 410.45
Larval Carcass
 
 550.125
Adult Head
 
 141
Adult Eye
 
 82.65
Adult Brain
 
 140.9
Adult Thoracic-Abdominal Ganglion
 
 168.8
Adult Crop
 
 280.1
Adult Midgut
 
 741.1
Adult Hindgut
 
 253.5
Adult Malpighian Tubules
 
 1008.2
Adult Fat Body
 
 223.4
Adult Salivary Gland
 
 229.6
Adult Heart
 
 188.475
Adult VirginFemale Spermatheca
 
 159.6
Adult InseminatedFemale Spermatheca
 
 242.7
Adult Ovary
 
 331
Adult Testis
 
 22.3
Adult Male Accessory Gland
 
 143
Adult Carcass
 
 145
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 250.775
Larval Midgut
 (612.9)
Larval Hindgut
 
 479.8
Larval Malpighian Tubules
 (758.9)
Larval Fat Body
 
 198.8
Larval Salivary Gland
 (950.4)
Larval Trachea
 
 410.45
Larval Carcass
 (550.125)
Adult Head
 
 141
Adult Eye
 
 82.65
Adult Brain
 
 140.9
Adult Thoracic-Abdominal Ganglion
 
 168.8
Adult Crop
 
 280.1
Adult Midgut
 (741.1)
Adult Hindgut
 
 253.5
Adult Malpighian Tubules
 (1008.2)
Adult Fat Body
 
 223.4
Adult Salivary Gland
 
 229.6
Adult Heart
 
 188.475
Adult VirginFemale Spermatheca
 
 159.6
Adult InseminatedFemale Spermatheca
 
 242.7
Adult Ovary
 
 331
Adult Testis
 
 22.3
Adult Male Accessory Gland
 
 143
Adult Carcass
 
 145
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 250.775
Larval Midgut
 
 612.9
Larval Hindgut
 
 479.8
Larval Malpighian Tubules
 
 758.9
Larval Fat Body
 
 198.8
Larval Salivary Gland
 
 950.4
Larval Trachea
 
 410.45
Larval Carcass
 
 550.125
Adult Head
 
 141
Adult Eye
 
 82.65
Adult Brain
 
 140.9
Adult Thoracic-Abdominal Ganglion
 
 168.8
Adult Crop
 
 280.1
Adult Midgut
 
 741.1
Adult Hindgut
 
 253.5
Adult Malpighian Tubules
 1008.2
Adult Fat Body
 
 223.4
Adult Salivary Gland
 
 229.6
Adult Heart
 
 188.475
Adult VirginFemale Spermatheca
 
 159.6
Adult InseminatedFemale Spermatheca
 
 242.7
Adult Ovary
 
 331
Adult Testis
 
 22.3
Adult Male Accessory Gland
 
 143
Adult Carcass
 
 145
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 250.775
Larval Midgut
 
 612.9
Larval Hindgut
 
 479.8
Larval Malpighian Tubules
 
 758.9
Larval Fat Body
 
 198.8
Larval Salivary Gland
 
 950.4
Larval Trachea
 
 410.45
Larval Carcass
 
 550.125
Adult Head
 
 141
Adult Eye
 
 82.65
Adult Brain
 
 140.9
Adult Thoracic-Abdominal Ganglion
 
 168.8
Adult Crop
 
 280.1
Adult Midgut
 
 741.1
Adult Hindgut
 
 253.5
Adult Malpighian Tubules
 
 1008.2
Adult Fat Body
 
 223.4
Adult Salivary Gland
 
 229.6
Adult Heart
 
 188.475
Adult VirginFemale Spermatheca
 
 159.6
Adult InseminatedFemale Spermatheca
 
 242.7
Adult Ovary
 
 331
Adult Testis
 
 22.3
Adult Male Accessory Gland
 
 143
Adult Carcass
 
 145
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0036298 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 250.775
Larval Midgut
 
 612.9
Larval Hindgut
 
 479.8
Larval Malpighian Tubules
 
 758.9
Larval Fat Body
 
 198.8
Larval Salivary Gland
 
 950.4
Larval Trachea
 
 410.45
Larval Carcass
 
 550.125
Adult Head
 
 141
Adult Eye
 
 82.65
Adult Brain
 
 140.9
Adult Thoracic-Abdominal Ganglion
 
 168.8
Adult Crop
 
 280.1
Adult Midgut
 
 741.1
Adult Hindgut
 
 253.5
Adult Malpighian Tubules
 
 1008.2
Adult Fat Body
 
 223.4
Adult Salivary Gland
 
 229.6
Adult Heart
 
 188.475
Adult VirginFemale Spermatheca
 
 159.6
Adult InseminatedFemale Spermatheca
 
 242.7
Adult Ovary
 
 331
Adult Testis
 
 22.3
Adult Male Accessory Gland
 
 143
Adult Carcass
 
 145
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 250.775
Larval Midgut
 612.9
Larval Hindgut
 
 479.8
Larval Malpighian Tubules
 758.9
Larval Fat Body
 
 198.8
Larval Salivary Gland
 (950.4)
Larval Trachea
 
 410.45
Larval Carcass
 550.125
Adult Head
 
 141
Adult Eye
 
 82.65
Adult Brain
 
 140.9
Adult Thoracic-Abdominal Ganglion
 
 168.8
Adult Crop
 
 280.1
Adult Midgut
 741.1
Adult Hindgut
 
 253.5
Adult Malpighian Tubules
 (1008.2)
Adult Fat Body
 
 223.4
Adult Salivary Gland
 
 229.6
Adult Heart
 
 188.475
Adult VirginFemale Spermatheca
 
 159.6
Adult InseminatedFemale Spermatheca
 
 242.7
Adult Ovary
 
 331
Adult Testis
 
 22.3
Adult Male Accessory Gland
 
 143
Adult Carcass
 
 145
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 250.775
Larval Midgut
 
 612.9
Larval Hindgut
 
 479.8
Larval Malpighian Tubules
 
 758.9
Larval Fat Body
 
 198.8
Larval Salivary Gland
 
 950.4
Larval Trachea
 
 410.45
Larval Carcass
 
 550.125
Adult Head
 
 141
Adult Eye
 
 82.65
Adult Brain
 
 140.9
Adult Thoracic-Abdominal Ganglion
 
 168.8
Adult Crop
 
 280.1
Adult Midgut
 
 741.1
Adult Hindgut
 
 253.5
Adult Malpighian Tubules
 1008.2
Adult Fat Body
 
 223.4
Adult Salivary Gland
 
 229.6
Adult Heart
 
 188.475
Adult VirginFemale Spermatheca
 
 159.6
Adult InseminatedFemale Spermatheca
 
 242.7
Adult Ovary
 
 331
Adult Testis
 
 22.3
Adult Male Accessory Gland
 
 143
Adult Carcass
 
 145
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 250.775
Larval Midgut
 
 612.9
Larval Hindgut
 
 479.8
Larval Malpighian Tubules
 
 758.9
Larval Fat Body
 
 198.8
Larval Salivary Gland
 
 950.4
Larval Trachea
 
 410.45
Larval Carcass
 
 550.125
Adult Head
 
 141
Adult Eye
 
 82.65
Adult Brain
 
 140.9
Adult Thoracic-Abdominal Ganglion
 
 168.8
Adult Crop
 
 280.1
Adult Midgut
 
 741.1
Adult Hindgut
 
 253.5
Adult Malpighian Tubules
 
 1008.2
Adult Fat Body
 
 223.4
Adult Salivary Gland
 
 229.6
Adult Heart
 
 188.475
Adult VirginFemale Spermatheca
 
 159.6
Adult InseminatedFemale Spermatheca
 
 242.7
Adult Ovary
 
 331
Adult Testis
 
 22.3
Adult Male Accessory Gland
 
 143
Adult Carcass
 
 145
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 141
 
NA 
Eye
 
 82.65
 
NA 
Brain
 
 140.9
 
250.775 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 168.8
 
NA 
Crop
 
 280.1
 
612.9 
Midgut
 
 741.1
 
479.8 
Hindgut
 
 253.5
 
758.9 
Malpighian Tubules
 
 1008.2
 
198.8 
Fat Body
 
 223.4
 
950.4 
Salivary Gland
 
 229.6
 
NA 
Heart
 
 188.475
 
410.45 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 159.6
 
NA 
InseminatedFemale Spermatheca
 
 242.7
 
NA 
Ovary
 
 331
 
NA 
Testis
 
 22.3
 
NA 
Male Accessory Gland
 
 143
 
550.125 
Carcass
 
 145

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 3 )
For All Classical Alleles Show

Allele of CG10627ClassMutagenStocksKnown lesion
CG10627c049862 --
CG10627e007281 --
CG10627HP35063
1 --
hide Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show

Allele of CG10627ClassMutagenStocksKnown lesion
CG10627GD70391 Yes
CG10627KK1008931 Yes
hide Aneuploid Aberrations
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
UAS construct
Insertions
Type of insertions
Name
Expression data
miscellaneous insertions
insertion of mobile activating element
hide Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
hide Terms Based on Experimental Evidence ( 0 terms )
hide Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term
References
inferred from sequence or structural similarity with UniProtKB:P38628
Biological Process
CV term
References
Cellular Component ( 0 terms)
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
CG10627 allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 6 )
Bloomington
Harvard
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 103 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
hide Antibody Information
hide Other Information
hide Discoverer
hide Etymology
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
hide Other Comments
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
Name Synonym
Secondary FlyBase IDs
hide References ( 16 )
Research paper
Ayroles et al., 2009, Nature Genetics 41(3): 299--307
Systems genetics of complex traits in Drosophila melanogaster. [FBrf0206705]
Supplementary material
The modENCODE Consortium, 2010, Science 330(6012):
DataS14: Gene co-expression clusters. [FBrf0213979]
Mummery-Widmer et al., 2009, Nature 458(7241):
Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Quinones-Coello, 2007, Genetics 175(3):
Supplemental Table 1. List of genes associated with protein or enhancer traps. [FBrf0200393]
Giot et al., 2003, Science 302(5651):
Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase
Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center
RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510]
Matthews, 2008.4.15, DP and HP P-element insertions submitted to the Bloomington Drosophila Stock Center.
DP and HP P-element insertions submitted to the Bloomington Drosophila Stock Center. [FBrf0204789]
Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center
RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327]
Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase.
Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms.
Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
FlyBase analysis
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection.
Genomic mapping of Exelixis insertion collection. [FBrf0184340]
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation
Find Enzymes, 1999.11, [Annotations performed at the Celera Jamboreee.]
[Annotations performed at the Celera Jamboreee.] [FBrf0126664]