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Gene Dmel\sowah

General Information
Symbol	Dmel\sowah	Species	D. melanogaster
Name	sosondowah	Annotation symbol	CG10632
Feature type	protein_coding_gene	FlyBase ID	FBgn0036302
Gene Model Status	Current	Stock availability	10 publicly available
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	69C6-69C8	Sequence location	3L:12,530,613..12,565,622 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene sosondowah is referred to in FlyBase by the symbol Dmel\sowah (CG10632, FBgn0036302). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 9 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. Protein features are: Ankyrin repeat; Ankyrin repeat-containing domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression at moderate levels in the following post-embryonic organs or tissues: larval trachea, adult male accessory gland. Gene sequence location is 3L:12530613..12565622.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10	References FlyBase Curators, 2010-, Gene Ontology (GO) annotation review.
FB2012_01	Sequence features HFA09758 HFA09186 BKN26792
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 69C6-69C8   Limits computationally determined from genome sequence between P{PZ}l(3)0508805088 and P{PZ}l(3)0692406924
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\sowah for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	GB:AY051801, GB:CO152972, and GB:AI404375, are aligned incorrectly to genome. Several microexons do not appear in the alignments. Gene model reviewed during 5.43 The gene contains micro-exons of 12, 3, 3, and 6 bases based on cDNA evidence that do not consistently appear in the alignments. DGC clone appears problematic: incomplete CDS (GM09162)
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) sowah-RG FBtr0300888  NM_001144471   2729   780 sowah-RH FBtr0300887  NM_001144469   2340   527 sowah-RI FBtr0300889  NM_168503   2294   635
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein sowah-PG   FBpp0290110   85.3   780   10.08     NP_001137943   ACL83298 sowah-PH   FBpp0290109   58.7   527   7.96     NP_001137941   ACL83296 sowah-PI   FBpp0290111   69.8   635   9.79     NP_729816   AAF49897
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Ankyrin repeat (IPR002110) Ankyrin repeat-containing domain (IPR020683)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA246368   AA247015   AA264015   AA392690   AA441583   AA540671   AA695839   AA696381   AA697134   AA941836   AA950788   AA951226   AA952284   AA979586   AE014296 AAF49897   AE014296 ACL83296   AE014296 ACL83298   AI520404   AI531534   AW941336   AW943093   AY051801 AAK93225   AY069268 AAL39413   BF503827   BI213515   BI216653   BI230938   BI238187   BI241557   BI242243   BI373324   BI634546   BT125944   CK604258   CO152972   CO184146   CO194631   CO299523   CO325862   CO337300   CO345449   CZ479094   CZ482825   CZ482826   CZ482827   CZ487600   EC073784   EC215528   EC219245   EC228827   EC245568   EC251774   EC258642   EC263364   EC266286   FE863495   FE863572   FE863626   FE863711   FE863760   FE863818   FE863880   GH291340   GH942959   GH946147   GH947717   GH949437   GH950314   GH950702   GH953796   GH953861   GH956014   GH956385   GH957880   GH959156   GH960149   GH964098   GH965387   GH965971   GH966518   GH966692   GH968285   GH979427   GH981931
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8T9J1 Q960W9 B7Z0B1 B7Z0A9 B7Z0B0
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0036302    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0036302 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0036302 expression level Developmental Stage   Expression Level embryo 00-02hr    1145 embryo 02-04hr    1079 embryo 04-06hr    991 embryo 06-08hr    895 embryo 08-10hr    803 embryo 10-12hr    1024 embryo 12-14hr    715 embryo 14-16hr    926 embryo 16-18hr    1005 embryo 18-20hr    1017 embryo 20-22hr    1153 embryo 22-24hr    901 larva L1    428 larva L2    329 larva L3 12hr old    311 larva L3 puffstage 1-2    492 larva L3 puffstage 3-6    790 larva L3 puffstage 7-9    847 white prepupae new    825 white prepupae 12hr    601 white prepupae 24hr    611 pupae 2d postWPP    580 pupae 3d postWPP    432 pupae 4d postWPP    370 adult male 01day    375 adult male 05day    474 adult male 30day    496 adult female 01day    612 adult female 05day    723 adult female 30day    778 Expression Level Scale  None   Extremely low   Very low   Low   Moderate  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1145) embryo 02-04hr  (1079) embryo 04-06hr  (991) embryo 06-08hr  (895) embryo 08-10hr  (803) embryo 10-12hr  (1024) embryo 12-14hr  (715) embryo 14-16hr  (926) embryo 16-18hr  (1005) embryo 18-20hr  (1017) embryo 20-22hr  (1153) embryo 22-24hr  (901) larva L1  (428) larva L2  (329) larva L3 12hr old  (311) larva L3 puffstage 1-2  (492) larva L3 puffstage 3-6  (790) larva L3 puffstage 7-9  (847) white prepupae new  (825) white prepupae 12hr  (601) white prepupae 24hr  (611) pupae 2d postWPP  (580) pupae 3d postWPP  (432) pupae 4d postWPP  (370) adult male 01day  (375) adult male 05day  (474) adult male 30day  (496) adult female 01day  (612) adult female 05day  (723) adult female 30day  (778) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1145 embryo 02-04hr    1079 embryo 04-06hr    991 embryo 06-08hr    895 embryo 08-10hr    803 embryo 10-12hr    1024 embryo 12-14hr    715 embryo 14-16hr    926 embryo 16-18hr    1005 embryo 18-20hr    1017 embryo 20-22hr    1153 embryo 22-24hr    901 larva L1    428 larva L2    329 larva L3 12hr old    311 larva L3 puffstage 1-2    492 larva L3 puffstage 3-6    790 larva L3 puffstage 7-9    847 white prepupae new    825 white prepupae 12hr    601 white prepupae 24hr    611 pupae 2d postWPP    580 pupae 3d postWPP    432 pupae 4d postWPP    370 adult male 01day    375 adult male 05day    474 adult male 30day    496 adult female 01day    612 adult female 05day    723 adult female 30day    778 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1145 embryo 02-04hr    1079 embryo 04-06hr    991 embryo 06-08hr    895 embryo 08-10hr    803 embryo 10-12hr    1024 embryo 12-14hr    715 embryo 14-16hr    926 embryo 16-18hr    1005 embryo 18-20hr    1017 embryo 20-22hr    1153 embryo 22-24hr    901 larva L1    428 larva L2    329 larva L3 12hr old    311 larva L3 puffstage 1-2    492 larva L3 puffstage 3-6    790 larva L3 puffstage 7-9    847 white prepupae new    825 white prepupae 12hr    601 white prepupae 24hr    611 pupae 2d postWPP    580 pupae 3d postWPP    432 pupae 4d postWPP    370 adult male 01day    375 adult male 05day    474 adult male 30day    496 adult female 01day    612 adult female 05day    723 adult female 30day    778 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1145 embryo 02-04hr    1079 embryo 04-06hr    991 embryo 06-08hr    895 embryo 08-10hr    803 embryo 10-12hr    1024 embryo 12-14hr    715 embryo 14-16hr    926 embryo 16-18hr    1005 embryo 18-20hr    1017 embryo 20-22hr    1153 embryo 22-24hr    901 larva L1    428 larva L2    329 larva L3 12hr old    311 larva L3 puffstage 1-2    492 larva L3 puffstage 3-6    790 larva L3 puffstage 7-9    847 white prepupae new    825 white prepupae 12hr    601 white prepupae 24hr    611 pupae 2d postWPP    580 pupae 3d postWPP    432 pupae 4d postWPP    370 adult male 01day    375 adult male 05day    474 adult male 30day    496 adult female 01day    612 adult female 05day    723 adult female 30day    778 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0036302 expression level Developmental Stage   Expression Level embryo 00-02hr    1145 embryo 02-04hr    1079 embryo 04-06hr    991 embryo 06-08hr    895 embryo 08-10hr    803 embryo 10-12hr    1024 embryo 12-14hr    715 embryo 14-16hr    926 embryo 16-18hr    1005 embryo 18-20hr    1017 embryo 20-22hr    1153 embryo 22-24hr    901 larva L1    428 larva L2    329 larva L3 12hr old    311 larva L3 puffstage 1-2    492 larva L3 puffstage 3-6    790 larva L3 puffstage 7-9    847 white prepupae new    825 white prepupae 12hr    601 white prepupae 24hr    611 pupae 2d postWPP    580 pupae 3d postWPP    432 pupae 4d postWPP    370 adult male 01day    375 adult male 05day    474 adult male 30day    496 adult female 01day    612 adult female 05day    723 adult female 30day    778 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1145) embryo 02-04hr  (1079) embryo 04-06hr  (991) embryo 06-08hr  (895) embryo 08-10hr  (803) embryo 10-12hr  (1024) embryo 12-14hr  (715) embryo 14-16hr  (926) embryo 16-18hr  (1005) embryo 18-20hr  (1017) embryo 20-22hr  (1153) embryo 22-24hr  (901) larva L1  (428) larva L2  (329) larva L3 12hr old  (311) larva L3 puffstage 1-2  (492) larva L3 puffstage 3-6  (790) larva L3 puffstage 7-9  (847) white prepupae new  (825) white prepupae 12hr  (601) white prepupae 24hr  (611) pupae 2d postWPP  (580) pupae 3d postWPP  (432) pupae 4d postWPP  (370) adult male 01day  (375) adult male 05day  (474) adult male 30day  (496) adult female 01day  (612) adult female 05day  (723) adult female 30day  (778) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1145 embryo 02-04hr    1079 embryo 04-06hr    991 embryo 06-08hr    895 embryo 08-10hr    803 embryo 10-12hr    1024 embryo 12-14hr    715 embryo 14-16hr    926 embryo 16-18hr    1005 embryo 18-20hr    1017 embryo 20-22hr    1153 embryo 22-24hr    901 larva L1    428 larva L2    329 larva L3 12hr old    311 larva L3 puffstage 1-2    492 larva L3 puffstage 3-6    790 larva L3 puffstage 7-9    847 white prepupae new    825 white prepupae 12hr    601 white prepupae 24hr    611 pupae 2d postWPP    580 pupae 3d postWPP    432 pupae 4d postWPP    370 adult male 01day    375 adult male 05day    474 adult male 30day    496 adult female 01day    612 adult female 05day    723 adult female 30day    778 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1145 embryo 02-04hr    1079 embryo 04-06hr    991 embryo 06-08hr    895 embryo 08-10hr    803 embryo 10-12hr    1024 embryo 12-14hr    715 embryo 14-16hr    926 embryo 16-18hr    1005 embryo 18-20hr    1017 embryo 20-22hr    1153 embryo 22-24hr    901 larva L1    428 larva L2    329 larva L3 12hr old    311 larva L3 puffstage 1-2    492 larva L3 puffstage 3-6    790 larva L3 puffstage 7-9    847 white prepupae new    825 white prepupae 12hr    601 white prepupae 24hr    611 pupae 2d postWPP    580 pupae 3d postWPP    432 pupae 4d postWPP    370 adult male 01day    375 adult male 05day    474 adult male 30day    496 adult female 01day    612 adult female 05day    723 adult female 30day    778 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1145 embryo 02-04hr    1079 embryo 04-06hr    991 embryo 06-08hr    895 embryo 08-10hr    803 embryo 10-12hr    1024 embryo 12-14hr    715 embryo 14-16hr    926 embryo 16-18hr    1005 embryo 18-20hr    1017 embryo 20-22hr    1153 embryo 22-24hr    901 larva L1    428 larva L2    329 larva L3 12hr old    311 larva L3 puffstage 1-2    492 larva L3 puffstage 3-6    790 larva L3 puffstage 7-9    847 white prepupae new    825 white prepupae 12hr    601 white prepupae 24hr    611 pupae 2d postWPP    580 pupae 3d postWPP    432 pupae 4d postWPP    370 adult male 01day    375 adult male 05day    474 adult male 30day    496 adult female 01day    612 adult female 05day    723 adult female 30day    778 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0036302    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0036302 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression at moderate levels in the following post-embryonic organs or tissues: larval trachea, adult male accessory gland. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Heatmap Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland no informative data Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain no informative data Adult Thoracic-Abdominal Ganglion no informative data Adult Crop no informative data Adult Midgut     Adult Hindgut no informative data Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart no informative data Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary no informative data Adult Testis no informative data Adult Male Accessory Gland no informative data Adult Carcass     modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_05
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0036302 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG10632-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable sowahf01127 viable, with Scer\GAL4pnr-MD237 sowahGD6711 Sterility Allele fertile sowahf01127 Phenotype manifest in Allele
Classical Alleles ( 8 )
For All Classical Alleles Show
Allele of sowah Class Mutagen Stocks Known lesion sowahf01127 piggyBac transposase 2 -- sowahe01289 piggyBac transposase 1 -- sowahf00359 piggyBac transposase 1 -- sowahf00360 piggyBac transposase 1 -- sowahf05010 piggyBac transposase 1 -- sowahMB00901 1 -- sowahMB01147 1 -- sowahMI02324 1 --
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of sowah Class Mutagen Stocks Known lesion sowahGD6711 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data
Insertions
	Type of insertions Name Expression data miscellaneous insertions Mi{MIC}sowahMI02324 NA PBac{RB}sowahe01289 NA PBac{WH}sowahf00359 NA PBac{WH}sowahf00360 NA PBac{WH}sowahf01127 NA PBac{WH}sowahf05010 NA insertion of enhancer trap binary system Mi{ET1}sowahMB00901 No Mi{ET1}sowahMB01147 No
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
	There is no information supporting a biological process, cellular component or molecular function term for this gene. (Based on a review of available data on: 2011-07-06)
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions sowah allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 64787 DroID - A comprehensive database of gene and protein interactions. • FBgn0036302 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 39438
Orthologs
Genome-wide drosophilid orthologs	Dana\GF25116 Dere\GG13812 Dper\GL24938 Dpse\GA10454 Dsec\GM24639 Dsim\GD12705 Dvir\GJ13806 Dwil\GK10564 Dyak\GE20106
Curated drosophilid orthologs	Dpse\GA10454
Linkouts	OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV13313 LH16541 FBgn0237429 FBgn0215559 FBgn0212579 FBgn0201025 FBgn0184432 FBgn0179502 JGI_V11_53087 FBgn0070511 FBgn0162525 FBgn0135816 FBgn0124309 FBgn0106075 FBgn0102108 CPIJ000121 BGIBMGA000574 ACYPI34901 GB13379 AGAP005008 AAEL010121 PB24747 PHUM562000 GLEAN_02800
Stocks & Reagents
Stocks Listed in FlyBase ( 10 )
Bloomington	18412 w1118; PBac{WH}sowahf01127 35109 y1 w*; Mi{MIC}sowahMI02324 22927 y1 w67c23; Mi{ET1}sowahMB00901 23001 y1 w67c23; Mi{ET1}sowahMB01147
Harvard	- PBac{RB}sowahe01289 - PBac{WH}sowahf00359 - PBac{WH}sowahf00360 - PBac{WH}sowahf01127 - PBac{WH}sowahf05010
VDRC	v39714 w1118; P{GD6711}v39714
Genomic Clones ( 2 )
	BACR01O14 BACR48G06 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 72 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GM09162 LD31582
Other clones	GH24050
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT05039 GM04573 GM07578 LD05239 LD06118 LD07382 LD11479 LD16563 LD20437 LD27141 LD29405 LD30915 LD34237 LD40555 RE16610 RE18931 RE23859 RE34581 RE38656 RE39529 RE60584 RH38726 SD02618 UT01043
Other clones	47580 51322 165078 214223.39 214437.50 521753 568947 CK01.4C.F3 CK01.96B.G2 DMG5-chr3L.22.005.pred.a EC27228 EC38928 EK175725 EN00952 EN14232 EP02814 EP22056 RM07417 RM07517 RM07617 RM07717 RM07817 RM07917 RM08017 RP004010752 RP004048100 RP004080033 RP004087232 RP004123594 RP004124539 RP004168752 RP004170126 RP004185221 RP004207575 RP004222040 RP004227474 RP004251258 RP004256672 RP004456833 RP004476928 RP004478346 RP004484682 RP004492579 RP004507157 RP004548493
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0036302 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 39438
Antibody Information
Other Information
Discoverer
Etymology
	Linkage between CG10632 and Iroquois genes has been maintained in members of all major metazoan groups, encompassing more than 600 million years of evolution. For this reason, CG10632 has been named 'sosondowah' after the mythological hunter tied to her doorpost by the Iroquois sky's goddess. (Irimia et al., 2008)
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: sowah CG10632 (Irimia et al., 2008)
Source for database merge of	Source for merge of: CG10632 BcDNA:GM09162 (BDGP Project Members, 2000-)
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_168503 NM_001144469 NM_001144471 RefSeq (Proteins) • NP_729816 NP_001137941 NP_001137943 DDBJ / EMBL / GenBank • AA697134 AA951226 AAF49897 AAK93225 AAL39413 ACL83296 ACL83297 ACL83298 AW941336 AW943093 AY051801 AY069268 CZ479094 CZ482825 CZ482826 CZ482827 CZ487600 Entrez Gene - A searchable database of RefSeq genes. • 39438 UniProtKB/TrEMBL • B7Z0A9 B7Z0B0 B7Z0B1 Q8T9J1 Q960W9
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Ankyrin repeat (IPR002110) Ankyrin repeat-containing domain (IPR020683)
Linkouts
	BioGRID - A database of protein and genetic interactions • 64787 DroID - A comprehensive database of gene and protein interactions. • FBgn0036302 DRSC - Results from RNAi screens. • FBgn0036302 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0036302 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG10632-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0036302 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 39438 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 39438 modMine - Data generated by the modENCODE project. • FBgn0036302 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV13313 LH16541 FBgn0237429 FBgn0215559 FBgn0212579 FBgn0201025 FBgn0184432 FBgn0179502 JGI_V11_53087 FBgn0070511 FBgn0162525 FBgn0135816 FBgn0124309 FBgn0106075 FBgn0102108 CPIJ000121 BGIBMGA000574 ACYPI34901 GB13379 AGAP005008 AAEL010121 PB24747 PHUM562000 GLEAN_02800
Synonyms & Secondary IDs ( 5 )
Reported As
Symbol Synonym	BcDNA:GM09162   CG10632 (Irimia et al., 2008, Kerner et al., 2009, Kim et al., 2005) sowah (Irimia et al., 2008)
Name Synonym	sosondowah   Sosondowah (Irimia et al., 2008)
Secondary FlyBase IDs
	FBgn0064944
References ( 19 )
Research paper	Kerner et al., 2009, BMC Evol. Biol. 9: 74 Evolutionary history of the iroquois/Irx genes in metazoans. [FBrf0207661] Irimia et al., 2008, Mol. Biol. Evol. 25(8): 1521--1525 Convergent evolution of clustering of Iroquois homeobox genes across metazoans. [FBrf0208760] Kim et al., 2005, Nature Immunology 6(2): 211--218 Downregulation of lipopolysaccharide response in Drosophila by negative crosstalk between the AP1 and NF-kappaB signaling modules. [FBrf0184193] Halfon et al., 2002, Genome Res. 12(7): 1019--1028 Computation-based discovery of related transcriptional regulatory modules and motifs using an experimentally validated combinatorial model. [FBrf0151337]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Bellen, 2011.3.29, set930.xml set930.xml [FBrf0213349] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Bellen, 2006.11.6, Batch702.xml Batch702.xml [FBrf0191798] Bellen, 2006.10.16, MBinsertSet693.xml MBinsertSet693.xml [FBrf0191807] Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase. Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase analysis	FlyBase Curators, 2010-, Gene Ontology (GO) annotation review. Gene Ontology (GO) annotation review. [FBrf0216433] FlyBase Curators, 2002-, Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. [FBrf0159398] FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. Genomic mapping of Exelixis insertion collection. [FBrf0184340] Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]