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Gene Dmel\CG10171

General Information
Symbol	Dmel\CG10171	Species	D. melanogaster
Name		Annotation symbol	CG10171
Feature type	protein_coding_gene	FlyBase ID	FBgn0036353
Gene Model Status	Current	Stock availability	3 publicly available
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	70A7-70A8	Sequence location	3L:13,379,046..13,380,969 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG10171 (FBgn0036353). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Protein of unknown function DUF92, TMEM19. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-06 and 12-18 hour embryonic stages, during late larval stages, at stages throughout the pupal period, in adult male stages. Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval fat body, adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval hindgut, larval Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1631006_a_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of CG10171. Gene sequence location is 3L:13379046..13380969.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10	References FlyBase Curators, 2010-, Gene Ontology (GO) annotation review.
FB2012_01	Sequence features HFA09711 BKN28190
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 70A7-70A8   Limits computationally determined from genome sequence between P{PZ}l(3)0422004220&P{lacW}l(3)j10B6j10B6 and P{PZ}stv00543
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG10171 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.43
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG10171-RA FBtr0075864  NM_140382   1647   330 CG10171-RB FBtr0075865  NM_168542   1807   334
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG10171-PA   FBpp0075598   36.1   330   10.31     NP_648639   AAF49826 CG10171-PB   FBpp0075599   36.5   334   10.20     NP_729888   AAN11833
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Protein of unknown function DUF92, TMEM19 (IPR002794)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA141738   AA141739   AA141963   AA391899   AA941704   AE014296 AAF49826   AE014296 AAN11833   AI259258   AI295793   AI387155   AI389715   AW942869   AY061341 AAL28889   BF490382   BF498632   BG637976   BI163958   BI214585   BI215379   BI230430   BP556988   BT015229   BT046137   CO183060   CO265501   CO271415   EC056503   EC061386   EC243464   EV581540   GH941284   GH941350   GH941455   GH941484   GH942234   GH943102   GH943247   GH943690   GH943722   GH943734   GH944137   GH945506   GH945868   GH946629   GH947968   GH948193   GH948665   GH949010   GH949908   GH949979   GH951196   GH951298   GH951437   GH952047   GH952443   GH954468   GH955225   GH955655   GH956235   GH956532   GH957346   GH957664   GH957807   GH958193   GH959023   GH959209   GH961042   GH961123   GH961529   GH962712   GH962849   GH962987   GH963534   GH963611   GH963711   GH963745   GH964588   GH964589   GH964874   GH965524   GH966017   GH966301   GH967188   GH967703   GH968098   GH968471   GH970297   GH970385   GH970568   GH971053   GH971877   GH972260   GH973594   GH973612   GH974529   GH974850   GH976840   GH976919   GH977059   GH977608   GH977743   GH978187   GH979948   GH981029   GH981717   GH982024   GH982689   GH983249   GH983294   GH983548   GH983838   GH984661
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8IQJ7 Q9VU64
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0036353    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0036353 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-06 and 12-18 hour embryonic stages, during late larval stages, at stages throughout the pupal period, in adult male stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0036353 expression level Developmental Stage   Expression Level embryo 00-02hr    1828 embryo 02-04hr    1575 embryo 04-06hr    1361 embryo 06-08hr    1151 embryo 08-10hr    946 embryo 10-12hr    1035 embryo 12-14hr    1357 embryo 14-16hr    1872 embryo 16-18hr    892 embryo 18-20hr    647 embryo 20-22hr    248 embryo 22-24hr    298 larva L1    409 larva L2    975 larva L3 12hr old    501 larva L3 puffstage 1-2    944 larva L3 puffstage 3-6    1292 larva L3 puffstage 7-9    1411 white prepupae new    1321 white prepupae 12hr    1717 white prepupae 24hr    2542 pupae 2d postWPP    3302 pupae 3d postWPP    1991 pupae 4d postWPP    1635 adult male 01day    2281 adult male 05day    3458 adult male 30day    3244 adult female 01day    825 adult female 05day    1248 adult female 30day    1235 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1828) embryo 02-04hr  (1575) embryo 04-06hr  (1361) embryo 06-08hr  (1151) embryo 08-10hr  (946) embryo 10-12hr  (1035) embryo 12-14hr  (1357) embryo 14-16hr  (1872) embryo 16-18hr  (892) embryo 18-20hr  (647) embryo 20-22hr  (248) embryo 22-24hr  (298) larva L1  (409) larva L2  (975) larva L3 12hr old  (501) larva L3 puffstage 1-2  (944) larva L3 puffstage 3-6  (1292) larva L3 puffstage 7-9  (1411) white prepupae new  (1321) white prepupae 12hr  (1717) white prepupae 24hr  (2542) pupae 2d postWPP  (3302) pupae 3d postWPP  (1991) pupae 4d postWPP  (1635) adult male 01day  (2281) adult male 05day  (3458) adult male 30day  (3244) adult female 01day  (825) adult female 05day  (1248) adult female 30day  (1235) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (1828) embryo 02-04hr  (1575) embryo 04-06hr    1361 embryo 06-08hr    1151 embryo 08-10hr    946 embryo 10-12hr    1035 embryo 12-14hr    1357 embryo 14-16hr  (1872) embryo 16-18hr    892 embryo 18-20hr    647 embryo 20-22hr    248 embryo 22-24hr    298 larva L1    409 larva L2    975 larva L3 12hr old    501 larva L3 puffstage 1-2    944 larva L3 puffstage 3-6    1292 larva L3 puffstage 7-9  1411 white prepupae new    1321 white prepupae 12hr  (1717) white prepupae 24hr  (2542) pupae 2d postWPP  (3302) pupae 3d postWPP  (1991) pupae 4d postWPP  (1635) adult male 01day  (2281) adult male 05day  (3458) adult male 30day  (3244) adult female 01day    825 adult female 05day    1248 adult female 30day    1235 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1828 embryo 02-04hr    1575 embryo 04-06hr    1361 embryo 06-08hr    1151 embryo 08-10hr    946 embryo 10-12hr    1035 embryo 12-14hr    1357 embryo 14-16hr    1872 embryo 16-18hr    892 embryo 18-20hr    647 embryo 20-22hr    248 embryo 22-24hr    298 larva L1    409 larva L2    975 larva L3 12hr old    501 larva L3 puffstage 1-2    944 larva L3 puffstage 3-6    1292 larva L3 puffstage 7-9    1411 white prepupae new    1321 white prepupae 12hr    1717 white prepupae 24hr    2542 pupae 2d postWPP    3302 pupae 3d postWPP    1991 pupae 4d postWPP    1635 adult male 01day    2281 adult male 05day    3458 adult male 30day    3244 adult female 01day    825 adult female 05day    1248 adult female 30day    1235 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1828 embryo 02-04hr    1575 embryo 04-06hr    1361 embryo 06-08hr    1151 embryo 08-10hr    946 embryo 10-12hr    1035 embryo 12-14hr    1357 embryo 14-16hr    1872 embryo 16-18hr    892 embryo 18-20hr    647 embryo 20-22hr    248 embryo 22-24hr    298 larva L1    409 larva L2    975 larva L3 12hr old    501 larva L3 puffstage 1-2    944 larva L3 puffstage 3-6    1292 larva L3 puffstage 7-9    1411 white prepupae new    1321 white prepupae 12hr    1717 white prepupae 24hr    2542 pupae 2d postWPP    3302 pupae 3d postWPP    1991 pupae 4d postWPP    1635 adult male 01day    2281 adult male 05day    3458 adult male 30day    3244 adult female 01day    825 adult female 05day    1248 adult female 30day    1235 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0036353 expression level Developmental Stage   Expression Level embryo 00-02hr    1828 embryo 02-04hr    1575 embryo 04-06hr    1361 embryo 06-08hr    1151 embryo 08-10hr    946 embryo 10-12hr    1035 embryo 12-14hr    1357 embryo 14-16hr    1872 embryo 16-18hr    892 embryo 18-20hr    647 embryo 20-22hr    248 embryo 22-24hr    298 larva L1    409 larva L2    975 larva L3 12hr old    501 larva L3 puffstage 1-2    944 larva L3 puffstage 3-6    1292 larva L3 puffstage 7-9    1411 white prepupae new    1321 white prepupae 12hr    1717 white prepupae 24hr    2542 pupae 2d postWPP    3302 pupae 3d postWPP    1991 pupae 4d postWPP    1635 adult male 01day    2281 adult male 05day    3458 adult male 30day    3244 adult female 01day    825 adult female 05day    1248 adult female 30day    1235 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1828) embryo 02-04hr  (1575) embryo 04-06hr  (1361) embryo 06-08hr  (1151) embryo 08-10hr  (946) embryo 10-12hr  (1035) embryo 12-14hr  (1357) embryo 14-16hr  (1872) embryo 16-18hr  (892) embryo 18-20hr  (647) embryo 20-22hr  (248) embryo 22-24hr  (298) larva L1  (409) larva L2  (975) larva L3 12hr old  (501) larva L3 puffstage 1-2  (944) larva L3 puffstage 3-6  (1292) larva L3 puffstage 7-9  (1411) white prepupae new  (1321) white prepupae 12hr  (1717) white prepupae 24hr  (2542) pupae 2d postWPP  (3302) pupae 3d postWPP  (1991) pupae 4d postWPP  (1635) adult male 01day  (2281) adult male 05day  (3458) adult male 30day  (3244) adult female 01day  (825) adult female 05day  (1248) adult female 30day  (1235) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  1828 embryo 02-04hr  1575 embryo 04-06hr    1361 embryo 06-08hr    1151 embryo 08-10hr    946 embryo 10-12hr    1035 embryo 12-14hr    1357 embryo 14-16hr  1872 embryo 16-18hr    892 embryo 18-20hr    647 embryo 20-22hr    248 embryo 22-24hr    298 larva L1    409 larva L2    975 larva L3 12hr old    501 larva L3 puffstage 1-2    944 larva L3 puffstage 3-6    1292 larva L3 puffstage 7-9  1411 white prepupae new    1321 white prepupae 12hr  1717 white prepupae 24hr  (2542) pupae 2d postWPP  (3302) pupae 3d postWPP  1991 pupae 4d postWPP  1635 adult male 01day  2281 adult male 05day  (3458) adult male 30day  (3244) adult female 01day    825 adult female 05day    1248 adult female 30day    1235 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1828 embryo 02-04hr    1575 embryo 04-06hr    1361 embryo 06-08hr    1151 embryo 08-10hr    946 embryo 10-12hr    1035 embryo 12-14hr    1357 embryo 14-16hr    1872 embryo 16-18hr    892 embryo 18-20hr    647 embryo 20-22hr    248 embryo 22-24hr    298 larva L1    409 larva L2    975 larva L3 12hr old    501 larva L3 puffstage 1-2    944 larva L3 puffstage 3-6    1292 larva L3 puffstage 7-9    1411 white prepupae new    1321 white prepupae 12hr    1717 white prepupae 24hr    2542 pupae 2d postWPP    3302 pupae 3d postWPP    1991 pupae 4d postWPP    1635 adult male 01day    2281 adult male 05day    3458 adult male 30day    3244 adult female 01day    825 adult female 05day    1248 adult female 30day    1235 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1828 embryo 02-04hr    1575 embryo 04-06hr    1361 embryo 06-08hr    1151 embryo 08-10hr    946 embryo 10-12hr    1035 embryo 12-14hr    1357 embryo 14-16hr    1872 embryo 16-18hr    892 embryo 18-20hr    647 embryo 20-22hr    248 embryo 22-24hr    298 larva L1    409 larva L2    975 larva L3 12hr old    501 larva L3 puffstage 1-2    944 larva L3 puffstage 3-6    1292 larva L3 puffstage 7-9    1411 white prepupae new    1321 white prepupae 12hr    1717 white prepupae 24hr    2542 pupae 2d postWPP    3302 pupae 3d postWPP    1991 pupae 4d postWPP    1635 adult male 01day    2281 adult male 05day    3458 adult male 30day    3244 adult female 01day    825 adult female 05day    1248 adult female 30day    1235 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0036353    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0036353 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval fat body, adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval hindgut, larval Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0036353 expression level Tissue   Expression Level Larval Central Nervous System    165.05 Larval Midgut    75.1 Larval Hindgut    182.7 Larval Malpighian Tubules    110.6 Larval Fat Body    536.6 Larval Salivary Gland    315.5 Larval Trachea    327.425 Larval Carcass    119.05 Adult Head    139.3 Adult Eye    219.375 Adult Brain    143.7 Adult Thoracic-Abdominal Ganglion    163.8 Adult Crop    151.7 Adult Midgut    43.7 Adult Hindgut    91 Adult Malpighian Tubules    70.4 Adult Fat Body    224.8 Adult Salivary Gland    171.8 Adult Heart    137.45 Adult VirginFemale Spermatheca    297.4 Adult InseminatedFemale Spermatheca    288 Adult Ovary    210.6 Adult Testis    754.7 Adult Male Accessory Gland    209.2 Adult Carcass    141.4 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    165.05 Larval Midgut    75.1 Larval Hindgut    182.7 Larval Malpighian Tubules    110.6 Larval Fat Body  536.6 Larval Salivary Gland    315.5 Larval Trachea    327.425 Larval Carcass    119.05 Adult Head    139.3 Adult Eye    219.375 Adult Brain    143.7 Adult Thoracic-Abdominal Ganglion    163.8 Adult Crop    151.7 Adult Midgut    43.7 Adult Hindgut    91 Adult Malpighian Tubules    70.4 Adult Fat Body    224.8 Adult Salivary Gland    171.8 Adult Heart    137.45 Adult VirginFemale Spermatheca    297.4 Adult InseminatedFemale Spermatheca    288 Adult Ovary    210.6 Adult Testis  (754.7) Adult Male Accessory Gland    209.2 Adult Carcass    141.4 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    165.05 Larval Midgut    75.1 Larval Hindgut    182.7 Larval Malpighian Tubules    110.6 Larval Fat Body    536.6 Larval Salivary Gland    315.5 Larval Trachea    327.425 Larval Carcass    119.05 Adult Head    139.3 Adult Eye    219.375 Adult Brain    143.7 Adult Thoracic-Abdominal Ganglion    163.8 Adult Crop    151.7 Adult Midgut    43.7 Adult Hindgut    91 Adult Malpighian Tubules    70.4 Adult Fat Body    224.8 Adult Salivary Gland    171.8 Adult Heart    137.45 Adult VirginFemale Spermatheca    297.4 Adult InseminatedFemale Spermatheca    288 Adult Ovary    210.6 Adult Testis    754.7 Adult Male Accessory Gland    209.2 Adult Carcass    141.4 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    165.05 Larval Midgut    75.1 Larval Hindgut    182.7 Larval Malpighian Tubules    110.6 Larval Fat Body    536.6 Larval Salivary Gland    315.5 Larval Trachea    327.425 Larval Carcass    119.05 Adult Head    139.3 Adult Eye    219.375 Adult Brain    143.7 Adult Thoracic-Abdominal Ganglion    163.8 Adult Crop    151.7 Adult Midgut    43.7 Adult Hindgut    91 Adult Malpighian Tubules    70.4 Adult Fat Body    224.8 Adult Salivary Gland    171.8 Adult Heart    137.45 Adult VirginFemale Spermatheca    297.4 Adult InseminatedFemale Spermatheca    288 Adult Ovary    210.6 Adult Testis    754.7 Adult Male Accessory Gland    209.2 Adult Carcass    141.4 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0036353 expression level Tissue   Expression Level Larval Central Nervous System    165.05 Larval Midgut    75.1 Larval Hindgut    182.7 Larval Malpighian Tubules    110.6 Larval Fat Body    536.6 Larval Salivary Gland    315.5 Larval Trachea    327.425 Larval Carcass    119.05 Adult Head    139.3 Adult Eye    219.375 Adult Brain    143.7 Adult Thoracic-Abdominal Ganglion    163.8 Adult Crop    151.7 Adult Midgut    43.7 Adult Hindgut    91 Adult Malpighian Tubules    70.4 Adult Fat Body    224.8 Adult Salivary Gland    171.8 Adult Heart    137.45 Adult VirginFemale Spermatheca    297.4 Adult InseminatedFemale Spermatheca    288 Adult Ovary    210.6 Adult Testis    754.7 Adult Male Accessory Gland    209.2 Adult Carcass    141.4 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    165.05 Larval Midgut    75.1 Larval Hindgut    182.7 Larval Malpighian Tubules    110.6 Larval Fat Body  536.6 Larval Salivary Gland    315.5 Larval Trachea    327.425 Larval Carcass    119.05 Adult Head    139.3 Adult Eye    219.375 Adult Brain    143.7 Adult Thoracic-Abdominal Ganglion    163.8 Adult Crop    151.7 Adult Midgut    43.7 Adult Hindgut    91 Adult Malpighian Tubules    70.4 Adult Fat Body    224.8 Adult Salivary Gland    171.8 Adult Heart    137.45 Adult VirginFemale Spermatheca    297.4 Adult InseminatedFemale Spermatheca    288 Adult Ovary    210.6 Adult Testis  754.7 Adult Male Accessory Gland    209.2 Adult Carcass    141.4 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    165.05 Larval Midgut    75.1 Larval Hindgut    182.7 Larval Malpighian Tubules    110.6 Larval Fat Body    536.6 Larval Salivary Gland    315.5 Larval Trachea    327.425 Larval Carcass    119.05 Adult Head    139.3 Adult Eye    219.375 Adult Brain    143.7 Adult Thoracic-Abdominal Ganglion    163.8 Adult Crop    151.7 Adult Midgut    43.7 Adult Hindgut    91 Adult Malpighian Tubules    70.4 Adult Fat Body    224.8 Adult Salivary Gland    171.8 Adult Heart    137.45 Adult VirginFemale Spermatheca    297.4 Adult InseminatedFemale Spermatheca    288 Adult Ovary    210.6 Adult Testis    754.7 Adult Male Accessory Gland    209.2 Adult Carcass    141.4 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    165.05 Larval Midgut    75.1 Larval Hindgut    182.7 Larval Malpighian Tubules    110.6 Larval Fat Body    536.6 Larval Salivary Gland    315.5 Larval Trachea    327.425 Larval Carcass    119.05 Adult Head    139.3 Adult Eye    219.375 Adult Brain    143.7 Adult Thoracic-Abdominal Ganglion    163.8 Adult Crop    151.7 Adult Midgut    43.7 Adult Hindgut    91 Adult Malpighian Tubules    70.4 Adult Fat Body    224.8 Adult Salivary Gland    171.8 Adult Heart    137.45 Adult VirginFemale Spermatheca    297.4 Adult InseminatedFemale Spermatheca    288 Adult Ovary    210.6 Adult Testis    754.7 Adult Male Accessory Gland    209.2 Adult Carcass    141.4 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    139.3   NA  Eye    219.375   NA  Brain    143.7   165.05  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    163.8   NA  Crop    151.7   75.1  Midgut    43.7   182.7  Hindgut    91   110.6  Malpighian Tubules    70.4   536.6  Fat Body    224.8   315.5  Salivary Gland    171.8   NA  Heart    137.45   327.425  Trachea    NA   NA  VirginFemale Spermatheca    297.4   NA  InseminatedFemale Spermatheca    288   NA  Ovary    210.6   NA  Testis    754.7   NA  Male Accessory Gland    209.2   119.05  Carcass    141.4 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_21
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0036353 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG10171-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG10171 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG10171GD3590 Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CG10171 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG10171 Class Mutagen Stocks Known lesion CG10171GD3590 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG10171KK108190 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD3590} NA P{KK108190} NA
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 1 unique term )
	There is no information supporting a biological process or molecular function term for this gene. (Based on a review of available data on: 2010-10-21)
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
integral to membrane inferred from electronic annotation with InterPro:IPR002794 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG10171 allele Gene References
External Data
Linkouts	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0036353 DroID - A comprehensive database of gene and protein interactions. • FBgn0036353 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 39501
Orthologs
Genome-wide drosophilid orthologs	Dana\GF10413 Dere\GG13778 Dgri\GH14423 Dmoj\GI13550 Dper\GL15697 Dpse\GA10130 Dsec\GM24600 Dvir\GJ11909 Dwil\GK16775 Dyak\GE20072
Curated drosophilid orthologs	Dpse\GA10130
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL007259-PA Aedes aegypti (mosquito) AGAP012271-PA Anopheles gambiae (mosquito) XP_623724.2 Apis mellifera (honey bee) XP_001947991.1 Acyrthosiphon pisum (pea aphid) At5g19930.1 Arabidopsis thaliana (wall cress) 5033 Batrachochytrium dendrobatidis (chytrid fungus) 277121 Branchiostoma floridae (lancelet) ENSBTAP00000016277 Bos taurus (bovine) ENSCAFP00000000674 Canis familiaris (dog) cn04509 Cryptococcus neoformans (yeast-like fungus) CPIJ010473 Culex pipens (mosquito) ENSCPOP00000015458 Cavia porcellus (guinea pig) 176026 Chlamidomonas reinhardtii (green alga) 219280 Capitella spl (polychaete worm) DDB0219223 Dictyostelium discoideum (amoeba) ENSDARP00000051029 Danio rerio (zebra fish) ENSECAP00000009090 Equus caballus (horse) XP_653164 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000000943 Gymnopilus aculeatus (mushroom) ENSGALP00000016531 Gallus gallus (chicken) 106099 Hypsipyla robusta (cedar shoot borer) ENSP00000266673 Homo sapiens (human) ISCW002556-PA Ixodes scapularis (deer tick) 134535 Lottia gigantea (owl limpet) ENSMODP00000025535 Monodelphis domestica (gray opossum) ENSMMUP00000027564 Macaca mulatta (rhesus monkey) ENSMUSP00000089808 Mus musculus (house mouse) 177046 Nematostella vectensis (starlet anemone) XP_001601604.1 Nasonia vitripennis (wasp) ENSOANP00000012203 Ornithorynchus anatinus (platypus) ENSORLP00000021539 Oryzias latipes (japanese killifish) LOC_Os01g32280.1 Oryza sativa (asian rice) 5344 Ostreococcus tauri (green alga) PHUM002503-PA Pediculus humanus (human body louse) ENSPPYP00000005440 Pongo pygmaeus (orangutan) 737545 Populus trichocarpa (black cottonwood) ENSPTRP00000008880 Pan troglodytes (chimpanzee) ENSRNOP00000005310 Rattus norvegicus (norway rat) 4749349 Sorghum bicolor (sorghum) XP_787408.2 Strongylocentrotus purpuratus (purple sea urchin) ENSTNIP00000021906 Tetraodon nigroviridis (green spotted pufferfish) 23471 Thalassiosira pseudonana (marine diatom) ENSTRUP00000016929 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000025338 Xenopus tropicalis (frog) YALI0F22627g Yarrowia lipolytica (nonconventional yeast) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV14696 LH22653 ISCW002556 FBgn0237396 FBgn0218775 FBgn0199162 FBgn0179463 FBgn0070189 FBgn0153301 FBgn0136305 FBgn0121899 FBgn0106041 FBgn0087454 CPIJ010473 BGIBMGA005388 ACYPI002429 GB12850 AGAP012271 AAEL007259 PB21794 PHUM579680
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
VDRC	v107908 P{KK108190}VIE-260B v43837 w1118; P{GD3590}v43837/CyO v43839 w1118; P{GD3590}v43839/TM3
Genomic Clones ( 1 )
	BACR17E13 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 106 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD27069 RE14111
Other clones	DPiM_LD27069 FI04569
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT13074 AT26848 GH17603 GH20953 LP02634 LP09532 RE03503 RE20539 RE21764
Other clones	32963 CK01.168C.F6 CK00055 CK02328 Dmel_dig_017061_0706_0652 EC24491 EC056503 EK103355 EK142821 FGM306F10 LD10991 RP004008797 RP004015578 RP004040129 RP004049866 RP004054050 RP004060803 RP004076304 RP004082988 RP004092808 RP004100590 RP004114100 RP004144242 RP004149622 RP004161103 RP004165427 RP004166753 RP004178072 RP004180211 RP004192014 RP004195931 RP004196547 RP004200241 RP004202964 RP004203925 RP004209473 RP004211211 RP004212058 RP004218037 RP004218921 RP004225515 RP004226042 RP004228700 RP004230279 RP004235547 RP004245319 RP004245689 RP004247678 RP004248133 RP004248347 RP004253171 RP004253624 RP004258527 RP004263074 RP004266770 RP004267523 RP004268217 RP004268250 RP004280326 RP004285783 RP004303530 RP004307384 RP004309389 RP004355322 RP004361909 RP004378772 RP004378888 RP004400462 RP004406023 RP004418138 RP004425034 RP004427500 RP004428574 RP004454419 RP004459651 RP004464215 RP004471252 RP004481395 RP004485224 RP004491626 RP004498158 RP004501171 RP004501181 RP004510698 RP004511660 RP004512519 RP004512610 RP004519567 RP004520507 RP004522053 RP004534993 RP004538329 RP004538830
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0036353 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 39501
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_140382 NM_168542 RefSeq (Proteins) • NP_648639 NP_729888 DDBJ / EMBL / GenBank • AA941704 AAF49826 AAL28889 AAN11833 AW942869 AY061341 BI230430 Entrez Gene - A searchable database of RefSeq genes. • 39501 UniProtKB/TrEMBL • Q8IQJ7 Q9VU64
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Protein of unknown function DUF92, TMEM19 (IPR002794)
Linkouts
	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0036353 DroID - A comprehensive database of gene and protein interactions. • FBgn0036353 DRSC - Results from RNAi screens. • FBgn0036353 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0036353 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG10171-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0036353 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 39501 InParanoid A subset of ortholog calls from InParanoid. • AAEL007259-PA Aedes aegypti (mosquito) AGAP012271-PA Anopheles gambiae (mosquito) XP_623724.2 Apis mellifera (honey bee) XP_001947991.1 Acyrthosiphon pisum (pea aphid) At5g19930.1 Arabidopsis thaliana (wall cress) 5033 Batrachochytrium dendrobatidis (chytrid fungus) 277121 Branchiostoma floridae (lancelet) ENSBTAP00000016277 Bos taurus (bovine) ENSCAFP00000000674 Canis familiaris (dog) cn04509 Cryptococcus neoformans (yeast-like fungus) CPIJ010473 Culex pipens (mosquito) ENSCPOP00000015458 Cavia porcellus (guinea pig) 176026 Chlamidomonas reinhardtii (green alga) 219280 Capitella spl (polychaete worm) DDB0219223 Dictyostelium discoideum (amoeba) ENSDARP00000051029 Danio rerio (zebra fish) ENSECAP00000009090 Equus caballus (horse) XP_653164 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000000943 Gymnopilus aculeatus (mushroom) ENSGALP00000016531 Gallus gallus (chicken) 106099 Hypsipyla robusta (cedar shoot borer) ENSP00000266673 Homo sapiens (human) ISCW002556-PA Ixodes scapularis (deer tick) 134535 Lottia gigantea (owl limpet) ENSMODP00000025535 Monodelphis domestica (gray opossum) ENSMMUP00000027564 Macaca mulatta (rhesus monkey) ENSMUSP00000089808 Mus musculus (house mouse) 177046 Nematostella vectensis (starlet anemone) XP_001601604.1 Nasonia vitripennis (wasp) ENSOANP00000012203 Ornithorynchus anatinus (platypus) ENSORLP00000021539 Oryzias latipes (japanese killifish) LOC_Os01g32280.1 Oryza sativa (asian rice) 5344 Ostreococcus tauri (green alga) PHUM002503-PA Pediculus humanus (human body louse) ENSPPYP00000005440 Pongo pygmaeus (orangutan) 737545 Populus trichocarpa (black cottonwood) ENSPTRP00000008880 Pan troglodytes (chimpanzee) ENSRNOP00000005310 Rattus norvegicus (norway rat) 4749349 Sorghum bicolor (sorghum) XP_787408.2 Strongylocentrotus purpuratus (purple sea urchin) ENSTNIP00000021906 Tetraodon nigroviridis (green spotted pufferfish) 23471 Thalassiosira pseudonana (marine diatom) ENSTRUP00000016929 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000025338 Xenopus tropicalis (frog) YALI0F22627g Yarrowia lipolytica (nonconventional yeast) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 39501 modMine - Data generated by the modENCODE project. • FBgn0036353 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV14696 LH22653 ISCW002556 FBgn0237396 FBgn0218775 FBgn0199162 FBgn0179463 FBgn0070189 FBgn0153301 FBgn0136305 FBgn0121899 FBgn0106041 FBgn0087454 CPIJ010473 BGIBMGA005388 ACYPI002429 GB12850 AGAP012271 AAEL007259 PB21794 PHUM579680
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG10171 (Keleman et al., 2009.8.5)
Name Synonym
Secondary FlyBase IDs
References ( 9 )
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
FlyBase analysis	FlyBase Curators, 2010-, Gene Ontology (GO) annotation review. Gene Ontology (GO) annotation review. [FBrf0216433] FlyBase Curators, 2002-, Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. [FBrf0159398]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]