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Gene Dmel\CG13484

General Information
Symbol	Dmel\CG13484	Species	D. melanogaster
Name		Annotation symbol	CG13484
Feature type	protein_coding_gene	FlyBase ID	FBgn0036406
Gene Model Status	Current	Stock availability	4 publicly available
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	70D1-70D1	Sequence location	3L:14,045,528..14,046,179 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG13484 (FBgn0036406). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-12 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult ovary. Comments on Affy2 ProbeSet: ProbeSet 1632847_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG13484. Gene sequence location is 3L:14045528..14046179.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features HFA10026 BKN26211
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 70D1-70D1   Limits computationally determined from genome sequence between P{EP}EP3561EP3561 and P{PZ}l(3)70Da02402&P{PZ}btl00208
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG13484 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG13484-RA FBtr0075780  NM_140433   652   151
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG13484-PA   FBpp0075522   17.5   151   9.97     NP_648690   AAF49763
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014296 AAF49763   BP551339   BT032816   CO192891   EV576328
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VUC4
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0036406    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0036406 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-12 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0036406 expression level Developmental Stage   Expression Level embryo 00-02hr    2212 embryo 02-04hr    2435 embryo 04-06hr    1842 embryo 06-08hr    1764 embryo 08-10hr    1909 embryo 10-12hr    1718 embryo 12-14hr    1115 embryo 14-16hr    876 embryo 16-18hr    724 embryo 18-20hr    615 embryo 20-22hr    913 embryo 22-24hr    812 larva L1    468 larva L2    436 larva L3 12hr old    307 larva L3 puffstage 1-2    367 larva L3 puffstage 3-6    547 larva L3 puffstage 7-9    661 white prepupae new    658 white prepupae 12hr    533 white prepupae 24hr    682 pupae 2d postWPP    645 pupae 3d postWPP    440 pupae 4d postWPP    297 adult male 01day    447 adult male 05day    560 adult male 30day    401 adult female 01day    489 adult female 05day    1276 adult female 30day    1276 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (2212) embryo 02-04hr  (2435) embryo 04-06hr  (1842) embryo 06-08hr  (1764) embryo 08-10hr  (1909) embryo 10-12hr  (1718) embryo 12-14hr  (1115) embryo 14-16hr  (876) embryo 16-18hr  (724) embryo 18-20hr  (615) embryo 20-22hr  (913) embryo 22-24hr  (812) larva L1  (468) larva L2  (436) larva L3 12hr old  (307) larva L3 puffstage 1-2  (367) larva L3 puffstage 3-6  (547) larva L3 puffstage 7-9  (661) white prepupae new  (658) white prepupae 12hr  (533) white prepupae 24hr  (682) pupae 2d postWPP  (645) pupae 3d postWPP  (440) pupae 4d postWPP  (297) adult male 01day  (447) adult male 05day  (560) adult male 30day  (401) adult female 01day  (489) adult female 05day  (1276) adult female 30day  (1276) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (2212) embryo 02-04hr  (2435) embryo 04-06hr  (1842) embryo 06-08hr  (1764) embryo 08-10hr  (1909) embryo 10-12hr  (1718) embryo 12-14hr    1115 embryo 14-16hr    876 embryo 16-18hr    724 embryo 18-20hr    615 embryo 20-22hr    913 embryo 22-24hr    812 larva L1    468 larva L2    436 larva L3 12hr old    307 larva L3 puffstage 1-2    367 larva L3 puffstage 3-6    547 larva L3 puffstage 7-9    661 white prepupae new    658 white prepupae 12hr    533 white prepupae 24hr    682 pupae 2d postWPP    645 pupae 3d postWPP    440 pupae 4d postWPP    297 adult male 01day    447 adult male 05day    560 adult male 30day    401 adult female 01day    489 adult female 05day    1276 adult female 30day    1276 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    2212 embryo 02-04hr    2435 embryo 04-06hr    1842 embryo 06-08hr    1764 embryo 08-10hr    1909 embryo 10-12hr    1718 embryo 12-14hr    1115 embryo 14-16hr    876 embryo 16-18hr    724 embryo 18-20hr    615 embryo 20-22hr    913 embryo 22-24hr    812 larva L1    468 larva L2    436 larva L3 12hr old    307 larva L3 puffstage 1-2    367 larva L3 puffstage 3-6    547 larva L3 puffstage 7-9    661 white prepupae new    658 white prepupae 12hr    533 white prepupae 24hr    682 pupae 2d postWPP    645 pupae 3d postWPP    440 pupae 4d postWPP    297 adult male 01day    447 adult male 05day    560 adult male 30day    401 adult female 01day    489 adult female 05day    1276 adult female 30day    1276 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    2212 embryo 02-04hr    2435 embryo 04-06hr    1842 embryo 06-08hr    1764 embryo 08-10hr    1909 embryo 10-12hr    1718 embryo 12-14hr    1115 embryo 14-16hr    876 embryo 16-18hr    724 embryo 18-20hr    615 embryo 20-22hr    913 embryo 22-24hr    812 larva L1    468 larva L2    436 larva L3 12hr old    307 larva L3 puffstage 1-2    367 larva L3 puffstage 3-6    547 larva L3 puffstage 7-9    661 white prepupae new    658 white prepupae 12hr    533 white prepupae 24hr    682 pupae 2d postWPP    645 pupae 3d postWPP    440 pupae 4d postWPP    297 adult male 01day    447 adult male 05day    560 adult male 30day    401 adult female 01day    489 adult female 05day    1276 adult female 30day    1276 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0036406 expression level Developmental Stage   Expression Level embryo 00-02hr    2212 embryo 02-04hr    2435 embryo 04-06hr    1842 embryo 06-08hr    1764 embryo 08-10hr    1909 embryo 10-12hr    1718 embryo 12-14hr    1115 embryo 14-16hr    876 embryo 16-18hr    724 embryo 18-20hr    615 embryo 20-22hr    913 embryo 22-24hr    812 larva L1    468 larva L2    436 larva L3 12hr old    307 larva L3 puffstage 1-2    367 larva L3 puffstage 3-6    547 larva L3 puffstage 7-9    661 white prepupae new    658 white prepupae 12hr    533 white prepupae 24hr    682 pupae 2d postWPP    645 pupae 3d postWPP    440 pupae 4d postWPP    297 adult male 01day    447 adult male 05day    560 adult male 30day    401 adult female 01day    489 adult female 05day    1276 adult female 30day    1276 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (2212) embryo 02-04hr  (2435) embryo 04-06hr  (1842) embryo 06-08hr  (1764) embryo 08-10hr  (1909) embryo 10-12hr  (1718) embryo 12-14hr  (1115) embryo 14-16hr  (876) embryo 16-18hr  (724) embryo 18-20hr  (615) embryo 20-22hr  (913) embryo 22-24hr  (812) larva L1  (468) larva L2  (436) larva L3 12hr old  (307) larva L3 puffstage 1-2  (367) larva L3 puffstage 3-6  (547) larva L3 puffstage 7-9  (661) white prepupae new  (658) white prepupae 12hr  (533) white prepupae 24hr  (682) pupae 2d postWPP  (645) pupae 3d postWPP  (440) pupae 4d postWPP  (297) adult male 01day  (447) adult male 05day  (560) adult male 30day  (401) adult female 01day  (489) adult female 05day  (1276) adult female 30day  (1276) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  2212 embryo 02-04hr  2435 embryo 04-06hr  1842 embryo 06-08hr  1764 embryo 08-10hr  1909 embryo 10-12hr  1718 embryo 12-14hr    1115 embryo 14-16hr    876 embryo 16-18hr    724 embryo 18-20hr    615 embryo 20-22hr    913 embryo 22-24hr    812 larva L1    468 larva L2    436 larva L3 12hr old    307 larva L3 puffstage 1-2    367 larva L3 puffstage 3-6    547 larva L3 puffstage 7-9    661 white prepupae new    658 white prepupae 12hr    533 white prepupae 24hr    682 pupae 2d postWPP    645 pupae 3d postWPP    440 pupae 4d postWPP    297 adult male 01day    447 adult male 05day    560 adult male 30day    401 adult female 01day    489 adult female 05day    1276 adult female 30day    1276 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    2212 embryo 02-04hr    2435 embryo 04-06hr    1842 embryo 06-08hr    1764 embryo 08-10hr    1909 embryo 10-12hr    1718 embryo 12-14hr    1115 embryo 14-16hr    876 embryo 16-18hr    724 embryo 18-20hr    615 embryo 20-22hr    913 embryo 22-24hr    812 larva L1    468 larva L2    436 larva L3 12hr old    307 larva L3 puffstage 1-2    367 larva L3 puffstage 3-6    547 larva L3 puffstage 7-9    661 white prepupae new    658 white prepupae 12hr    533 white prepupae 24hr    682 pupae 2d postWPP    645 pupae 3d postWPP    440 pupae 4d postWPP    297 adult male 01day    447 adult male 05day    560 adult male 30day    401 adult female 01day    489 adult female 05day    1276 adult female 30day    1276 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    2212 embryo 02-04hr    2435 embryo 04-06hr    1842 embryo 06-08hr    1764 embryo 08-10hr    1909 embryo 10-12hr    1718 embryo 12-14hr    1115 embryo 14-16hr    876 embryo 16-18hr    724 embryo 18-20hr    615 embryo 20-22hr    913 embryo 22-24hr    812 larva L1    468 larva L2    436 larva L3 12hr old    307 larva L3 puffstage 1-2    367 larva L3 puffstage 3-6    547 larva L3 puffstage 7-9    661 white prepupae new    658 white prepupae 12hr    533 white prepupae 24hr    682 pupae 2d postWPP    645 pupae 3d postWPP    440 pupae 4d postWPP    297 adult male 01day    447 adult male 05day    560 adult male 30day    401 adult female 01day    489 adult female 05day    1276 adult female 30day    1276 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0036406    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0036406 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult ovary. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0036406 expression level Tissue   Expression Level Larval Central Nervous System    84.3 Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules    38.2 Larval Fat Body no informative data Larval Salivary Gland    56.8 Larval Trachea    50.425 Larval Carcass no informative data Adult Head    48.5 Adult Eye    80.2 Adult Brain    62.4 Adult Thoracic-Abdominal Ganglion    69 Adult Crop no informative data Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    27 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    108.7 Adult Testis no informative data Adult Male Accessory Gland    40.5 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    84.3 Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules    38.2 Larval Fat Body no informative data Larval Salivary Gland    56.8 Larval Trachea    50.425 Larval Carcass no informative data Adult Head    48.5 Adult Eye    80.2 Adult Brain    62.4 Adult Thoracic-Abdominal Ganglion    69 Adult Crop no informative data Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    27 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    108.7 Adult Testis no informative data Adult Male Accessory Gland    40.5 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    84.3 Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules    38.2 Larval Fat Body no informative data Larval Salivary Gland    56.8 Larval Trachea    50.425 Larval Carcass no informative data Adult Head    48.5 Adult Eye    80.2 Adult Brain    62.4 Adult Thoracic-Abdominal Ganglion    69 Adult Crop no informative data Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    27 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    108.7 Adult Testis no informative data Adult Male Accessory Gland    40.5 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    84.3 Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules    38.2 Larval Fat Body no informative data Larval Salivary Gland    56.8 Larval Trachea    50.425 Larval Carcass no informative data Adult Head    48.5 Adult Eye    80.2 Adult Brain    62.4 Adult Thoracic-Abdominal Ganglion    69 Adult Crop no informative data Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    27 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    108.7 Adult Testis no informative data Adult Male Accessory Gland    40.5 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0036406 expression level Tissue   Expression Level Larval Central Nervous System    84.3 Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules    38.2 Larval Fat Body no informative data Larval Salivary Gland    56.8 Larval Trachea    50.425 Larval Carcass no informative data Adult Head    48.5 Adult Eye    80.2 Adult Brain    62.4 Adult Thoracic-Abdominal Ganglion    69 Adult Crop no informative data Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    27 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    108.7 Adult Testis no informative data Adult Male Accessory Gland    40.5 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    84.3 Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules    38.2 Larval Fat Body no informative data Larval Salivary Gland    56.8 Larval Trachea    50.425 Larval Carcass no informative data Adult Head    48.5 Adult Eye    80.2 Adult Brain    62.4 Adult Thoracic-Abdominal Ganglion    69 Adult Crop no informative data Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    27 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    108.7 Adult Testis no informative data Adult Male Accessory Gland    40.5 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    84.3 Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules    38.2 Larval Fat Body no informative data Larval Salivary Gland    56.8 Larval Trachea    50.425 Larval Carcass no informative data Adult Head    48.5 Adult Eye    80.2 Adult Brain    62.4 Adult Thoracic-Abdominal Ganglion    69 Adult Crop no informative data Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    27 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    108.7 Adult Testis no informative data Adult Male Accessory Gland    40.5 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    84.3 Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules    38.2 Larval Fat Body no informative data Larval Salivary Gland    56.8 Larval Trachea    50.425 Larval Carcass no informative data Adult Head    48.5 Adult Eye    80.2 Adult Brain    62.4 Adult Thoracic-Abdominal Ganglion    69 Adult Crop no informative data Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    27 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    108.7 Adult Testis no informative data Adult Male Accessory Gland    40.5 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules     Larval Fat Body no informative data Larval Salivary Gland     Larval Trachea     Larval Carcass no informative data Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop no informative data Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart     Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary     Adult Testis no informative data Adult Male Accessory Gland     Adult Carcass no informative data FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    48.5   NA  Eye    80.2   NA  Brain    62.4   84.3  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    69   NA  Crop    no informative data   no informative data  Midgut    no informative data   no informative data  Hindgut    no informative data   38.2  Malpighian Tubules    no informative data   no informative data  Fat Body    no informative data   56.8  Salivary Gland    no informative data   NA  Heart    27   50.425  Trachea    NA   NA  VirginFemale Spermatheca    no informative data   NA  InseminatedFemale Spermatheca    no informative data   NA  Ovary    108.7   NA  Testis    no informative data   NA  Male Accessory Gland    40.5   no informative data  Carcass    no informative data modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_17
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0036406 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG13484-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele semi-lethal | pupal stage, with Scer\GAL4pnr-MD237 CG13484GD16989 viable, with Scer\GAL4pnr-MD237 CG13484GD8036 Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CG13484 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG13484 Class Mutagen Stocks Known lesion CG13484GD16989 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG13484GD8036 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG13484KK106211 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD8036} NA P{GD16989} NA P{KK106211} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EPg}HP36775 NA P{EPgy2}CG32138EY03931 NA
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG13484 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0036406
Orthologs
Genome-wide drosophilid orthologs	Dana\GF25208 Dere\GG13737 Dgri\GH16349 Dmoj\GI11541 Dper\GL24836 Dpse\GA12318 Dsec\GM24559 Dsim\GD12632 Dvir\GJ11561 Dyak\GE20031
Curated drosophilid orthologs	Dpse\GA12318
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • CPIJ004256 Culex pipens (mosquito) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0237356 FBgn0219147 FBgn0198819 FBgn0184359 FBgn0179422 FBgn0072364 FBgn0162424 FBgn0134301 FBgn0123820 FBgn0106000 FBgn0102200 CPIJ004256 ACYPI48471 AGAP004804 AAEL012993 PHUM476180
Stocks & Reagents
Stocks Listed in FlyBase ( 4 )
VDRC	v100913 P{KK106211}VIE-260B v47235 w1118 P{GD16989}v47235 v47236 w1118; P{GD16989}v47236 v17207 w1118; P{GD8036}v17207/TM3
Genomic Clones ( 1 )
	BACR35M01 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 4 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones	IP21604
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones	Dmel_dig_017214_0710_1776 EC34722 FGM212C11
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0036406 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 39560
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_140433 RefSeq (Proteins) • NP_648690 DDBJ / EMBL / GenBank • AAF49763 Entrez Gene - A searchable database of RefSeq genes. • 39560 UniProtKB/TrEMBL • Q9VUC4
Other Crossreferences
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0036406 DRSC - Results from RNAi screens. • FBgn0036406 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0036406 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG13484-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0036406 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 39560 InParanoid A subset of ortholog calls from InParanoid. • CPIJ004256 Culex pipens (mosquito) modMine - Data generated by the modENCODE project. • FBgn0036406 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0237356 FBgn0219147 FBgn0198819 FBgn0184359 FBgn0179422 FBgn0072364 FBgn0162424 FBgn0134301 FBgn0123820 FBgn0106000 FBgn0102200 CPIJ004256 ACYPI48471 AGAP004804 AAEL012993 PHUM476180
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG13484 (Keleman et al., 2009.8.5)
Name Synonym
Secondary FlyBase IDs
References ( 9 )
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Levis, 2009.8.13, Release 5 sequence localizations for HP and DP lines. Release 5 sequence localizations for HP and DP lines. [FBrf0208533] Matthews, 2008.4.15, DP and HP P-element insertions submitted to the Bloomington Drosophila Stock Center. DP and HP P-element insertions submitted to the Bloomington Drosophila Stock Center. [FBrf0204789] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327]
FlyBase analysis	FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177]