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Gene Dmel\CG5567

General Information
Symbol	Dmel\CG5567	Species	D. melanogaster
Name		Annotation symbol	CG5567
Feature type	protein_coding_gene	FlyBase ID	FBgn0036760
Gene Model Status	Current	Stock availability	8 publicly available
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	75A4-75A4	Sequence location	3L:17,834,640..17,836,644 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG5567 (FBgn0036760). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: 4-nitrophenylphosphatase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: metabolic process. 7 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: 2-phosphoglycolate phosphatase, eukaryotic; HAD-like domain; HAD-superfamily hydrolase, subfamily IIA; Nitrophenylphosphatase-like domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 18-24 hour embryonic stages, during early larval stages. Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: adult crop, adult midgut, adult Malpighian tubules, adult heart, virgin spermatheca. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, larval midgut, larval/adult hindgut, larval Malpighian tubules, larval/adult fat body, adult salivary gland, larval trachea, adult female reproductive system, adult testis, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1637298_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG5567. Gene sequence location is 3L:17834640..17836644.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 75A4-75A4   Limits computationally determined from genome sequence between P{lacW}l(3)j11B2j11B2 and P{PZ}W05014
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG5567 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.45
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG5567-RA FBtr0075161  NM_140758   1288   330
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG5567-PA   FBpp0074927   36.4   330   6.51     NP_649015   AAF49296
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • 2-phosphoglycolate phosphatase, eukaryotic (IPR006349) HAD-superfamily hydrolase, subfamily IIA (IPR006357) HAD-like domain (IPR023214) Nitrophenylphosphatase-like domain (IPR023215)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014296 AAF49296   AI106671   AI134460   AI260721   AI260723   AI296710   AI402053   AY069056 AAL39201   BI485497   BI614248   BI630350   BP543260   BP558578   BT088927   CO177841   CO182559   CO270643   CO342478   CZ469388   CZ469389   CZ478174   CZ488550   EC074659   EC220153   EC258373   EV575917   EV581869   GH749209   GH751452   GH752135   GH752874   GH755205   GH755655   GH756912   GH756915   GH757854   GH772126   GH773882   GH776008   GH776137   GH781707   GH782450   GH782882   GH783171   GH783469   GH783846   GH786198   GH791811   GH794003   GH795839   GH796542   GH798218   GH799438   GH800294   GH803725   GH804884   GH804914   GH806534   GH809653   GH811342   GH811583   GH815153   GH816587   GH816669   GH817055   GH817407   GH823211   GH823722   GH825381   GH826545   GH828287   GH829298   GH829655   GH830591   GH832616   GH835076   GH836518   GH837034   GH840760   GH841063   GH841688   GH845718   GH846330   GH851934   GH853620   GH853663   GH857101   GH858109   GH859663   GH862523   GH865422   GH866844   GH867818   GH871989   GH873405   GH873624   GH874646   GH874982   GH876529   GH876583   GH878899   GH880110   GH881258   GH881323   GH884880   GH886861   GH889716   GH889988   GH891637   GH895907   GH897299   GH904292   GH907716   GH908290   GH909353   GH909803   GH910032   GH910821   GH912270   GH912581   GH912954   GH916386   GH918990   GH921990   GH922788   GH924284   GH924501   GH925316   GH928060   GH930924   GH931070   GH933160   GH933179   GH933657   GH936117   GH940754
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VVL5 Q8T0U0
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 4 -- 6   organism   (Fisher et al., 2012) Comment:rapidly degraded organism | faint & ubiquitous   (Fisher et al., 2012) embryonic stage 11 -- 12   anterior midgut primordium   (Fisher et al., 2012) posterior midgut primordium   (Fisher et al., 2012) embryonic stage 13 -- 16   dorsal pharyngeal muscle   (Fisher et al., 2012) embryonic/larval midgut   (Fisher et al., 2012) embryonic/larval visceral muscle   (Fisher et al., 2012) organism | faint & ubiquitous   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: adult crop, adult midgut, adult Malpighian tubules, adult heart, virgin spermatheca. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, larval midgut, larval/adult hindgut, larval Malpighian tubules, larval/adult fat body, adult salivary gland, larval trachea, adult female reproductive system, adult testis, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    198.9 Larval Midgut    138.1 Larval Hindgut    171.4 Larval Malpighian Tubules    243.1 Larval Fat Body    106.5 Larval Salivary Gland    76.2 Larval Trachea    153.375 Larval Carcass    247.7 Adult Head    260.7 Adult Eye    223.55 Adult Brain    217.6 Adult Thoracic-Abdominal Ganglion    209.7 Adult Crop    609.4 Adult Midgut    528.1 Adult Hindgut    419.7 Adult Malpighian Tubules    993.3 Adult Fat Body    404.6 Adult Salivary Gland    306.3 Adult Heart    588.625 Adult VirginFemale Spermatheca    549.4 Adult InseminatedFemale Spermatheca    447.5 Adult Ovary    335.2 Adult Testis    167.8 Adult Male Accessory Gland    94.7 Adult Carcass    381.9 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    198.9 Larval Midgut    138.1 Larval Hindgut    171.4 Larval Malpighian Tubules    243.1 Larval Fat Body    106.5 Larval Salivary Gland    76.2 Larval Trachea    153.375 Larval Carcass    247.7 Adult Head    260.7 Adult Eye    223.55 Adult Brain    217.6 Adult Thoracic-Abdominal Ganglion    209.7 Adult Crop  (609.4) Adult Midgut  528.1 Adult Hindgut    419.7 Adult Malpighian Tubules  (993.3) Adult Fat Body    404.6 Adult Salivary Gland    306.3 Adult Heart  (588.625) Adult VirginFemale Spermatheca  (549.4) Adult InseminatedFemale Spermatheca    447.5 Adult Ovary    335.2 Adult Testis    167.8 Adult Male Accessory Gland    94.7 Adult Carcass    381.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    198.9 Larval Midgut    138.1 Larval Hindgut    171.4 Larval Malpighian Tubules    243.1 Larval Fat Body    106.5 Larval Salivary Gland    76.2 Larval Trachea    153.375 Larval Carcass    247.7 Adult Head    260.7 Adult Eye    223.55 Adult Brain    217.6 Adult Thoracic-Abdominal Ganglion    209.7 Adult Crop    609.4 Adult Midgut    528.1 Adult Hindgut    419.7 Adult Malpighian Tubules    993.3 Adult Fat Body    404.6 Adult Salivary Gland    306.3 Adult Heart    588.625 Adult VirginFemale Spermatheca    549.4 Adult InseminatedFemale Spermatheca    447.5 Adult Ovary    335.2 Adult Testis    167.8 Adult Male Accessory Gland    94.7 Adult Carcass    381.9 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    198.9 Larval Midgut    138.1 Larval Hindgut    171.4 Larval Malpighian Tubules    243.1 Larval Fat Body    106.5 Larval Salivary Gland    76.2 Larval Trachea    153.375 Larval Carcass    247.7 Adult Head    260.7 Adult Eye    223.55 Adult Brain    217.6 Adult Thoracic-Abdominal Ganglion    209.7 Adult Crop    609.4 Adult Midgut    528.1 Adult Hindgut    419.7 Adult Malpighian Tubules    993.3 Adult Fat Body    404.6 Adult Salivary Gland    306.3 Adult Heart    588.625 Adult VirginFemale Spermatheca    549.4 Adult InseminatedFemale Spermatheca    447.5 Adult Ovary    335.2 Adult Testis    167.8 Adult Male Accessory Gland    94.7 Adult Carcass    381.9 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    198.9 Larval Midgut    138.1 Larval Hindgut    171.4 Larval Malpighian Tubules    243.1 Larval Fat Body    106.5 Larval Salivary Gland    76.2 Larval Trachea    153.375 Larval Carcass    247.7 Adult Head    260.7 Adult Eye    223.55 Adult Brain    217.6 Adult Thoracic-Abdominal Ganglion    209.7 Adult Crop    609.4 Adult Midgut    528.1 Adult Hindgut    419.7 Adult Malpighian Tubules    993.3 Adult Fat Body    404.6 Adult Salivary Gland    306.3 Adult Heart    588.625 Adult VirginFemale Spermatheca    549.4 Adult InseminatedFemale Spermatheca    447.5 Adult Ovary    335.2 Adult Testis    167.8 Adult Male Accessory Gland    94.7 Adult Carcass    381.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    198.9 Larval Midgut    138.1 Larval Hindgut    171.4 Larval Malpighian Tubules    243.1 Larval Fat Body    106.5 Larval Salivary Gland    76.2 Larval Trachea    153.375 Larval Carcass    247.7 Adult Head    260.7 Adult Eye    223.55 Adult Brain    217.6 Adult Thoracic-Abdominal Ganglion    209.7 Adult Crop  609.4 Adult Midgut  528.1 Adult Hindgut    419.7 Adult Malpighian Tubules  (993.3) Adult Fat Body    404.6 Adult Salivary Gland    306.3 Adult Heart  588.625 Adult VirginFemale Spermatheca  549.4 Adult InseminatedFemale Spermatheca    447.5 Adult Ovary    335.2 Adult Testis    167.8 Adult Male Accessory Gland    94.7 Adult Carcass    381.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    198.9 Larval Midgut    138.1 Larval Hindgut    171.4 Larval Malpighian Tubules    243.1 Larval Fat Body    106.5 Larval Salivary Gland    76.2 Larval Trachea    153.375 Larval Carcass    247.7 Adult Head    260.7 Adult Eye    223.55 Adult Brain    217.6 Adult Thoracic-Abdominal Ganglion    209.7 Adult Crop    609.4 Adult Midgut    528.1 Adult Hindgut    419.7 Adult Malpighian Tubules    993.3 Adult Fat Body    404.6 Adult Salivary Gland    306.3 Adult Heart    588.625 Adult VirginFemale Spermatheca    549.4 Adult InseminatedFemale Spermatheca    447.5 Adult Ovary    335.2 Adult Testis    167.8 Adult Male Accessory Gland    94.7 Adult Carcass    381.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    198.9 Larval Midgut    138.1 Larval Hindgut    171.4 Larval Malpighian Tubules    243.1 Larval Fat Body    106.5 Larval Salivary Gland    76.2 Larval Trachea    153.375 Larval Carcass    247.7 Adult Head    260.7 Adult Eye    223.55 Adult Brain    217.6 Adult Thoracic-Abdominal Ganglion    209.7 Adult Crop    609.4 Adult Midgut    528.1 Adult Hindgut    419.7 Adult Malpighian Tubules    993.3 Adult Fat Body    404.6 Adult Salivary Gland    306.3 Adult Heart    588.625 Adult VirginFemale Spermatheca    549.4 Adult InseminatedFemale Spermatheca    447.5 Adult Ovary    335.2 Adult Testis    167.8 Adult Male Accessory Gland    94.7 Adult Carcass    381.9 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    260.7   NA  Eye    223.55   NA  Brain    217.6   198.9  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    209.7   NA  Crop    609.4   138.1  Midgut    528.1   171.4  Hindgut    419.7   243.1  Malpighian Tubules    993.3   106.5  Fat Body    404.6   76.2  Salivary Gland    306.3   NA  Heart    588.625   153.375  Trachea    NA   NA  VirginFemale Spermatheca    549.4   NA  InseminatedFemale Spermatheca    447.5   NA  Ovary    335.2   NA  Testis    167.8   NA  Male Accessory Gland    94.7   247.7  Carcass    381.9 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    12 central nervous system, larvae L3    5 central nervous system, pupae P8    5 head, virgin 1-day female    20 head, virgin 4-day female    19 head, virgin 20-day female    22 head, mated 1-day female    13 head, mated 4-day female    16 head, mated 20-day female    17 head, mated 1-day male    17 head, mated 4-day male    21 head, mated 20-day male    33 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    9 digestive system, 1-day adult    31 digestive system, 4-day adult    20 digestive system, 20-day adult    24 fat body, larvae L3 wandering    2 fat body, white prepupae    6 fat body, pupae P8    10 carcass, larvae L3 wandering    7 carcass, 1-day adult    15 carcass, 4-day adult    18 carcass, 20-day adult    22 ovary, virgin 4-day female    39 ovary, mated 4-day female    27 testis, mated 4-day male    39 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    12 central nervous system, larvae L3    5 central nervous system, pupae P8    5 head, virgin 1-day female    20 head, virgin 4-day female    19 head, virgin 20-day female    22 head, mated 1-day female    13 head, mated 4-day female    16 head, mated 20-day female    17 head, mated 1-day male    17 head, mated 4-day male    21 head, mated 20-day male  (33) salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    9 digestive system, 1-day adult  (31) digestive system, 4-day adult    20 digestive system, 20-day adult    24 fat body, larvae L3 wandering    2 fat body, white prepupae    6 fat body, pupae P8    10 carcass, larvae L3 wandering    7 carcass, 1-day adult    15 carcass, 4-day adult    18 carcass, 20-day adult    22 ovary, virgin 4-day female  (39) ovary, mated 4-day female  (27) testis, mated 4-day male  (39) accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    12 central nervous system, larvae L3    5 central nervous system, pupae P8    5 head, virgin 1-day female    20 head, virgin 4-day female    19 head, virgin 20-day female    22 head, mated 1-day female    13 head, mated 4-day female    16 head, mated 20-day female    17 head, mated 1-day male    17 head, mated 4-day male    21 head, mated 20-day male    33 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    9 digestive system, 1-day adult    31 digestive system, 4-day adult    20 digestive system, 20-day adult    24 fat body, larvae L3 wandering    2 fat body, white prepupae    6 fat body, pupae P8    10 carcass, larvae L3 wandering    7 carcass, 1-day adult    15 carcass, 4-day adult    18 carcass, 20-day adult    22 ovary, virgin 4-day female    39 ovary, mated 4-day female    27 testis, mated 4-day male    39 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    12 central nervous system, larvae L3    5 central nervous system, pupae P8    5 head, virgin 1-day female    20 head, virgin 4-day female    19 head, virgin 20-day female    22 head, mated 1-day female    13 head, mated 4-day female    16 head, mated 20-day female    17 head, mated 1-day male    17 head, mated 4-day male    21 head, mated 20-day male    33 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    9 digestive system, 1-day adult    31 digestive system, 4-day adult    20 digestive system, 20-day adult    24 fat body, larvae L3 wandering    2 fat body, white prepupae    6 fat body, pupae P8    10 carcass, larvae L3 wandering    7 carcass, 1-day adult    15 carcass, 4-day adult    18 carcass, 20-day adult    22 ovary, virgin 4-day female    39 ovary, mated 4-day female    27 testis, mated 4-day male    39 accessory gland, mated 4-day male    7 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    12 central nervous system, larvae L3    5 central nervous system, pupae P8    5 head, virgin 1-day female    20 head, virgin 4-day female    19 head, virgin 20-day female    22 head, mated 1-day female    13 head, mated 4-day female    16 head, mated 20-day female    17 head, mated 1-day male    17 head, mated 4-day male    21 head, mated 20-day male    33 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    9 digestive system, 1-day adult    31 digestive system, 4-day adult    20 digestive system, 20-day adult    24 fat body, larvae L3 wandering    2 fat body, white prepupae    6 fat body, pupae P8    10 carcass, larvae L3 wandering    7 carcass, 1-day adult    15 carcass, 4-day adult    18 carcass, 20-day adult    22 ovary, virgin 4-day female    39 ovary, mated 4-day female    27 testis, mated 4-day male    39 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    12 central nervous system, larvae L3    5 central nervous system, pupae P8    5 head, virgin 1-day female    20 head, virgin 4-day female    19 head, virgin 20-day female    22 head, mated 1-day female    13 head, mated 4-day female    16 head, mated 20-day female    17 head, mated 1-day male    17 head, mated 4-day male    21 head, mated 20-day male  (33) salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    9 digestive system, 1-day adult  31 digestive system, 4-day adult    20 digestive system, 20-day adult    24 fat body, larvae L3 wandering    2 fat body, white prepupae    6 fat body, pupae P8    10 carcass, larvae L3 wandering    7 carcass, 1-day adult    15 carcass, 4-day adult    18 carcass, 20-day adult    22 ovary, virgin 4-day female  (39) ovary, mated 4-day female  27 testis, mated 4-day male  (39) accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    12 central nervous system, larvae L3    5 central nervous system, pupae P8    5 head, virgin 1-day female    20 head, virgin 4-day female    19 head, virgin 20-day female    22 head, mated 1-day female    13 head, mated 4-day female    16 head, mated 20-day female    17 head, mated 1-day male    17 head, mated 4-day male    21 head, mated 20-day male    33 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    9 digestive system, 1-day adult    31 digestive system, 4-day adult    20 digestive system, 20-day adult    24 fat body, larvae L3 wandering    2 fat body, white prepupae    6 fat body, pupae P8    10 carcass, larvae L3 wandering    7 carcass, 1-day adult    15 carcass, 4-day adult    18 carcass, 20-day adult    22 ovary, virgin 4-day female    39 ovary, mated 4-day female    27 testis, mated 4-day male    39 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    12 central nervous system, larvae L3    5 central nervous system, pupae P8    5 head, virgin 1-day female    20 head, virgin 4-day female    19 head, virgin 20-day female    22 head, mated 1-day female    13 head, mated 4-day female    16 head, mated 20-day female    17 head, mated 1-day male    17 head, mated 4-day male    21 head, mated 20-day male    33 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    9 digestive system, 1-day adult    31 digestive system, 4-day adult    20 digestive system, 20-day adult    24 fat body, larvae L3 wandering    2 fat body, white prepupae    6 fat body, pupae P8    10 carcass, larvae L3 wandering    7 carcass, 1-day adult    15 carcass, 4-day adult    18 carcass, 20-day adult    22 ovary, virgin 4-day female    39 ovary, mated 4-day female    27 testis, mated 4-day male    39 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 18-24 hour embryonic stages, during early larval stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    41 embryo 02-04hr    10 embryo 04-06hr    2 embryo 06-08hr    2 embryo 08-10hr    4 embryo 10-12hr    11 embryo 12-14hr    14 embryo 14-16hr    13 embryo 16-18hr    30 embryo 18-20hr    62 embryo 20-22hr    93 embryo 22-24hr    102 larva L1    56 larva L2    59 larva L3 12hr old    43 larva L3 puffstage 1-2    21 larva L3 puffstage 3-6    15 larva L3 puffstage 7-9    15 white prepupae new    13 white prepupae 12hr    14 white prepupae 24hr    13 pupae 2d postWPP    14 pupae 3d postWPP    22 pupae 4d postWPP    23 adult male 01day    41 adult male 05day    36 adult male 30day    29 adult female 01day    28 adult female 05day    36 adult female 30day    37 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (41) embryo 02-04hr    10 embryo 04-06hr    2 embryo 06-08hr    2 embryo 08-10hr    4 embryo 10-12hr    11 embryo 12-14hr    14 embryo 14-16hr    13 embryo 16-18hr  (30) embryo 18-20hr  (62) embryo 20-22hr  (93) embryo 22-24hr  (102) larva L1  (56) larva L2  (59) larva L3 12hr old  (43) larva L3 puffstage 1-2    21 larva L3 puffstage 3-6    15 larva L3 puffstage 7-9    15 white prepupae new    13 white prepupae 12hr    14 white prepupae 24hr    13 pupae 2d postWPP    14 pupae 3d postWPP    22 pupae 4d postWPP    23 adult male 01day  (41) adult male 05day  (36) adult male 30day  (29) adult female 01day  (28) adult female 05day  (36) adult female 30day  (37) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    41 embryo 02-04hr    10 embryo 04-06hr    2 embryo 06-08hr    2 embryo 08-10hr    4 embryo 10-12hr    11 embryo 12-14hr    14 embryo 14-16hr    13 embryo 16-18hr    30 embryo 18-20hr    62 embryo 20-22hr    93 embryo 22-24hr  102 larva L1    56 larva L2    59 larva L3 12hr old    43 larva L3 puffstage 1-2    21 larva L3 puffstage 3-6    15 larva L3 puffstage 7-9    15 white prepupae new    13 white prepupae 12hr    14 white prepupae 24hr    13 pupae 2d postWPP    14 pupae 3d postWPP    22 pupae 4d postWPP    23 adult male 01day    41 adult male 05day    36 adult male 30day    29 adult female 01day    28 adult female 05day    36 adult female 30day    37 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    41 embryo 02-04hr    10 embryo 04-06hr    2 embryo 06-08hr    2 embryo 08-10hr    4 embryo 10-12hr    11 embryo 12-14hr    14 embryo 14-16hr    13 embryo 16-18hr    30 embryo 18-20hr    62 embryo 20-22hr    93 embryo 22-24hr    102 larva L1    56 larva L2    59 larva L3 12hr old    43 larva L3 puffstage 1-2    21 larva L3 puffstage 3-6    15 larva L3 puffstage 7-9    15 white prepupae new    13 white prepupae 12hr    14 white prepupae 24hr    13 pupae 2d postWPP    14 pupae 3d postWPP    22 pupae 4d postWPP    23 adult male 01day    41 adult male 05day    36 adult male 30day    29 adult female 01day    28 adult female 05day    36 adult female 30day    37 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    41 embryo 02-04hr    10 embryo 04-06hr    2 embryo 06-08hr    2 embryo 08-10hr    4 embryo 10-12hr    11 embryo 12-14hr    14 embryo 14-16hr    13 embryo 16-18hr    30 embryo 18-20hr    62 embryo 20-22hr    93 embryo 22-24hr    102 larva L1    56 larva L2    59 larva L3 12hr old    43 larva L3 puffstage 1-2    21 larva L3 puffstage 3-6    15 larva L3 puffstage 7-9    15 white prepupae new    13 white prepupae 12hr    14 white prepupae 24hr    13 pupae 2d postWPP    14 pupae 3d postWPP    22 pupae 4d postWPP    23 adult male 01day    41 adult male 05day    36 adult male 30day    29 adult female 01day    28 adult female 05day    36 adult female 30day    37 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (41) embryo 02-04hr    10 embryo 04-06hr    2 embryo 06-08hr    2 embryo 08-10hr    4 embryo 10-12hr    11 embryo 12-14hr    14 embryo 14-16hr    13 embryo 16-18hr  30 embryo 18-20hr  (62) embryo 20-22hr  (93) embryo 22-24hr  (102) larva L1  (56) larva L2  (59) larva L3 12hr old  (43) larva L3 puffstage 1-2    21 larva L3 puffstage 3-6    15 larva L3 puffstage 7-9    15 white prepupae new    13 white prepupae 12hr    14 white prepupae 24hr    13 pupae 2d postWPP    14 pupae 3d postWPP    22 pupae 4d postWPP    23 adult male 01day  (41) adult male 05day  (36) adult male 30day  29 adult female 01day  28 adult female 05day  (36) adult female 30day  (37) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    41 embryo 02-04hr    10 embryo 04-06hr    2 embryo 06-08hr    2 embryo 08-10hr    4 embryo 10-12hr    11 embryo 12-14hr    14 embryo 14-16hr    13 embryo 16-18hr    30 embryo 18-20hr    62 embryo 20-22hr    93 embryo 22-24hr  102 larva L1    56 larva L2    59 larva L3 12hr old    43 larva L3 puffstage 1-2    21 larva L3 puffstage 3-6    15 larva L3 puffstage 7-9    15 white prepupae new    13 white prepupae 12hr    14 white prepupae 24hr    13 pupae 2d postWPP    14 pupae 3d postWPP    22 pupae 4d postWPP    23 adult male 01day    41 adult male 05day    36 adult male 30day    29 adult female 01day    28 adult female 05day    36 adult female 30day    37 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    41 embryo 02-04hr    10 embryo 04-06hr    2 embryo 06-08hr    2 embryo 08-10hr    4 embryo 10-12hr    11 embryo 12-14hr    14 embryo 14-16hr    13 embryo 16-18hr    30 embryo 18-20hr    62 embryo 20-22hr    93 embryo 22-24hr    102 larva L1    56 larva L2    59 larva L3 12hr old    43 larva L3 puffstage 1-2    21 larva L3 puffstage 3-6    15 larva L3 puffstage 7-9    15 white prepupae new    13 white prepupae 12hr    14 white prepupae 24hr    13 pupae 2d postWPP    14 pupae 3d postWPP    22 pupae 4d postWPP    23 adult male 01day    41 adult male 05day    36 adult male 30day    29 adult female 01day    28 adult female 05day    36 adult female 30day    37 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    19 Schneider line 2 Sg4    20 embryonic 1182-4H    15 embryonic GM2    37 embryonic Kc167    22 embryonic S1    15 embryonic S3    13 leg disc CME L1    21 wing disc CME-W2    12 wing disc ML-DmD8    11 wing disc ML-DmD9    12 wing disc ML-DmD16-c3    8 wing disc ML-DmD21    15 wing disc ML-DmD32    8 haltere disc ML-DmD17-c3    12 eye-antennal disc ML-DmD11    20 antennal disc ML-DmD20-c5    8 mixed discs ML-DmD4-c1    11 CNS ML-DmBG1-c1    12 CNS ML-DmBG2-c2    14 tumorous blood cells mbn2    13 ovary fGS/OSS    5 ovary OSC    9 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    19 Schneider line 2 Sg4    20 embryonic 1182-4H    15 embryonic GM2  (37) embryonic Kc167    22 embryonic S1    15 embryonic S3    13 leg disc CME L1    21 wing disc CME-W2    12 wing disc ML-DmD8    11 wing disc ML-DmD9    12 wing disc ML-DmD16-c3    8 wing disc ML-DmD21    15 wing disc ML-DmD32    8 haltere disc ML-DmD17-c3    12 eye-antennal disc ML-DmD11    20 antennal disc ML-DmD20-c5    8 mixed discs ML-DmD4-c1    11 CNS ML-DmBG1-c1    12 CNS ML-DmBG2-c2    14 tumorous blood cells mbn2    13 ovary fGS/OSS    5 ovary OSC    9 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    19 Schneider line 2 Sg4    20 embryonic 1182-4H    15 embryonic GM2    37 embryonic Kc167    22 embryonic S1    15 embryonic S3    13 leg disc CME L1    21 wing disc CME-W2    12 wing disc ML-DmD8    11 wing disc ML-DmD9    12 wing disc ML-DmD16-c3    8 wing disc ML-DmD21    15 wing disc ML-DmD32    8 haltere disc ML-DmD17-c3    12 eye-antennal disc ML-DmD11    20 antennal disc ML-DmD20-c5    8 mixed discs ML-DmD4-c1    11 CNS ML-DmBG1-c1    12 CNS ML-DmBG2-c2    14 tumorous blood cells mbn2    13 ovary fGS/OSS    5 ovary OSC    9 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    19 Schneider line 2 Sg4    20 embryonic 1182-4H    15 embryonic GM2    37 embryonic Kc167    22 embryonic S1    15 embryonic S3    13 leg disc CME L1    21 wing disc CME-W2    12 wing disc ML-DmD8    11 wing disc ML-DmD9    12 wing disc ML-DmD16-c3    8 wing disc ML-DmD21    15 wing disc ML-DmD32    8 haltere disc ML-DmD17-c3    12 eye-antennal disc ML-DmD11    20 antennal disc ML-DmD20-c5    8 mixed discs ML-DmD4-c1    11 CNS ML-DmBG1-c1    12 CNS ML-DmBG2-c2    14 tumorous blood cells mbn2    13 ovary fGS/OSS    5 ovary OSC    9 ovary OSS    4 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    19 Schneider line 2 Sg4    20 embryonic 1182-4H    15 embryonic GM2    37 embryonic Kc167    22 embryonic S1    15 embryonic S3    13 leg disc CME L1    21 wing disc CME-W2    12 wing disc ML-DmD8    11 wing disc ML-DmD9    12 wing disc ML-DmD16-c3    8 wing disc ML-DmD21    15 wing disc ML-DmD32    8 haltere disc ML-DmD17-c3    12 eye-antennal disc ML-DmD11    20 antennal disc ML-DmD20-c5    8 mixed discs ML-DmD4-c1    11 CNS ML-DmBG1-c1    12 CNS ML-DmBG2-c2    14 tumorous blood cells mbn2    13 ovary fGS/OSS    5 ovary OSC    9 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    19 Schneider line 2 Sg4    20 embryonic 1182-4H    15 embryonic GM2  (37) embryonic Kc167    22 embryonic S1    15 embryonic S3    13 leg disc CME L1    21 wing disc CME-W2    12 wing disc ML-DmD8    11 wing disc ML-DmD9    12 wing disc ML-DmD16-c3    8 wing disc ML-DmD21    15 wing disc ML-DmD32    8 haltere disc ML-DmD17-c3    12 eye-antennal disc ML-DmD11    20 antennal disc ML-DmD20-c5    8 mixed discs ML-DmD4-c1    11 CNS ML-DmBG1-c1    12 CNS ML-DmBG2-c2    14 tumorous blood cells mbn2    13 ovary fGS/OSS    5 ovary OSC    9 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    19 Schneider line 2 Sg4    20 embryonic 1182-4H    15 embryonic GM2    37 embryonic Kc167    22 embryonic S1    15 embryonic S3    13 leg disc CME L1    21 wing disc CME-W2    12 wing disc ML-DmD8    11 wing disc ML-DmD9    12 wing disc ML-DmD16-c3    8 wing disc ML-DmD21    15 wing disc ML-DmD32    8 haltere disc ML-DmD17-c3    12 eye-antennal disc ML-DmD11    20 antennal disc ML-DmD20-c5    8 mixed discs ML-DmD4-c1    11 CNS ML-DmBG1-c1    12 CNS ML-DmBG2-c2    14 tumorous blood cells mbn2    13 ovary fGS/OSS    5 ovary OSC    9 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    19 Schneider line 2 Sg4    20 embryonic 1182-4H    15 embryonic GM2    37 embryonic Kc167    22 embryonic S1    15 embryonic S3    13 leg disc CME L1    21 wing disc CME-W2    12 wing disc ML-DmD8    11 wing disc ML-DmD9    12 wing disc ML-DmD16-c3    8 wing disc ML-DmD21    15 wing disc ML-DmD32    8 haltere disc ML-DmD17-c3    12 eye-antennal disc ML-DmD11    20 antennal disc ML-DmD20-c5    8 mixed discs ML-DmD4-c1    11 CNS ML-DmBG1-c1    12 CNS ML-DmBG2-c2    14 tumorous blood cells mbn2    13 ovary fGS/OSS    5 ovary OSC    9 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    3 heat shock, 4-day adult    19 Cadmium 50 mM 6 hrs, larvae L3    20 Cadmium 50 mM 12 hrs, larvae L3    17 Cadmium 50 mM 48 hrs, 4-day adult    22 Cadmium 100 mM 48 hrs, 4-day adult    25 Copper 0.5 mM 12 hrs, larvae L3    2 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    8 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    30 Ethanol 5% 3 hrs, larvae L3    33 Ethanol 10% 3 hrs, larvae L3    22 Caffeine 1.5 mg/ml 4 hrs, larvae L3    23 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    23 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    29 Rotenone 8 μg 12 hrs, larvae L3    30 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    3 heat shock, 4-day adult    19 Cadmium 50 mM 6 hrs, larvae L3    20 Cadmium 50 mM 12 hrs, larvae L3    17 Cadmium 50 mM 48 hrs, 4-day adult    22 Cadmium 100 mM 48 hrs, 4-day adult    25 Copper 0.5 mM 12 hrs, larvae L3    2 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    8 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3  (30) Ethanol 5% 3 hrs, larvae L3  (33) Ethanol 10% 3 hrs, larvae L3    22 Caffeine 1.5 mg/ml 4 hrs, larvae L3    23 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (29) Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    23 Paraquat 10 mM 48 hrs, 4-day adult  (33) Rotenone 2 μg 12 hrs, larvae L3  (29) Rotenone 8 μg 12 hrs, larvae L3  (30) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    3 heat shock, 4-day adult    19 Cadmium 50 mM 6 hrs, larvae L3    20 Cadmium 50 mM 12 hrs, larvae L3    17 Cadmium 50 mM 48 hrs, 4-day adult    22 Cadmium 100 mM 48 hrs, 4-day adult    25 Copper 0.5 mM 12 hrs, larvae L3    2 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    8 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    30 Ethanol 5% 3 hrs, larvae L3    33 Ethanol 10% 3 hrs, larvae L3    22 Caffeine 1.5 mg/ml 4 hrs, larvae L3    23 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    23 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    29 Rotenone 8 μg 12 hrs, larvae L3    30 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    3 heat shock, 4-day adult    19 Cadmium 50 mM 6 hrs, larvae L3    20 Cadmium 50 mM 12 hrs, larvae L3    17 Cadmium 50 mM 48 hrs, 4-day adult    22 Cadmium 100 mM 48 hrs, 4-day adult    25 Copper 0.5 mM 12 hrs, larvae L3    2 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    8 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    30 Ethanol 5% 3 hrs, larvae L3    33 Ethanol 10% 3 hrs, larvae L3    22 Caffeine 1.5 mg/ml 4 hrs, larvae L3    23 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    23 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    29 Rotenone 8 μg 12 hrs, larvae L3    30 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    3 heat shock, 4-day adult    19 Cadmium 50 mM 6 hrs, larvae L3    20 Cadmium 50 mM 12 hrs, larvae L3    17 Cadmium 50 mM 48 hrs, 4-day adult    22 Cadmium 100 mM 48 hrs, 4-day adult    25 Copper 0.5 mM 12 hrs, larvae L3    2 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    8 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    30 Ethanol 5% 3 hrs, larvae L3    33 Ethanol 10% 3 hrs, larvae L3    22 Caffeine 1.5 mg/ml 4 hrs, larvae L3    23 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    23 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    29 Rotenone 8 μg 12 hrs, larvae L3    30 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    3 heat shock, 4-day adult    19 Cadmium 50 mM 6 hrs, larvae L3    20 Cadmium 50 mM 12 hrs, larvae L3    17 Cadmium 50 mM 48 hrs, 4-day adult    22 Cadmium 100 mM 48 hrs, 4-day adult    25 Copper 0.5 mM 12 hrs, larvae L3    2 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    8 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3  30 Ethanol 5% 3 hrs, larvae L3  (33) Ethanol 10% 3 hrs, larvae L3    22 Caffeine 1.5 mg/ml 4 hrs, larvae L3    23 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  29 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    23 Paraquat 10 mM 48 hrs, 4-day adult  (33) Rotenone 2 μg 12 hrs, larvae L3  29 Rotenone 8 μg 12 hrs, larvae L3  30 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    3 heat shock, 4-day adult    19 Cadmium 50 mM 6 hrs, larvae L3    20 Cadmium 50 mM 12 hrs, larvae L3    17 Cadmium 50 mM 48 hrs, 4-day adult    22 Cadmium 100 mM 48 hrs, 4-day adult    25 Copper 0.5 mM 12 hrs, larvae L3    2 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    8 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    30 Ethanol 5% 3 hrs, larvae L3    33 Ethanol 10% 3 hrs, larvae L3    22 Caffeine 1.5 mg/ml 4 hrs, larvae L3    23 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    23 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    29 Rotenone 8 μg 12 hrs, larvae L3    30 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    3 heat shock, 4-day adult    19 Cadmium 50 mM 6 hrs, larvae L3    20 Cadmium 50 mM 12 hrs, larvae L3    17 Cadmium 50 mM 48 hrs, 4-day adult    22 Cadmium 100 mM 48 hrs, 4-day adult    25 Copper 0.5 mM 12 hrs, larvae L3    2 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    8 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    30 Ethanol 5% 3 hrs, larvae L3    33 Ethanol 10% 3 hrs, larvae L3    22 Caffeine 1.5 mg/ml 4 hrs, larvae L3    23 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    23 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    29 Rotenone 8 μg 12 hrs, larvae L3    30 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_20
External Data & Images
Linkouts	BDGP expression data • FI11325 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0036760 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG5567-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG5567GD11694 Phenotype manifest in Allele
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of CG5567 Class Mutagen Stocks Known lesion CG5567f05921 piggyBac transposase 2 -- CG5567c04637 piggyBac transposase 1 -- CG5567e00280 piggyBac transposase 1 --
Alleles Carried on Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG5567 Class Mutagen Stocks Known lesion CG5567GD11694 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG5567HM05173 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG5567KK100541 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG5567NIG.5567R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(3)07084 (Buffin et al., 2007)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD11694} NA P{KK100541} NA P{NIG.5567R} NA P{TRiP.HM05173} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions PBac{PB}CG5567c04637 NA PBac{RB}CG5567e00280 NA PBac{WH}CG5567f05921 NA
Gene Ontology: Function, Process & Cellular Component ( 2 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 2 terms )
Molecular Function
CV term Evidence References
4-nitrophenylphosphatase activity inferred from sequence or structural similarity with UniProtKB:Q07689 (FlyBase, 1992-)
Biological Process
CV term Evidence References
metabolic process inferred from electronic annotation with InterPro:IPR005834, InterPro:IPR006349, InterPro:IPR006357 (FlyBase Curators et al., 2004-)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
CG5567 - CG10912 anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based (Mintseris et al., 2009.11.23, Guruharsha et al., 2011) CG5567 - CG30281 experimental knowledge based (Guruharsha et al., 2011) CG5567 - CG5577 anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based (Mintseris et al., 2009.11.23, Guruharsha et al., 2011)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG5567 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0036760 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 39986
Orthologs
OrthoDB Orthologs (51) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6CC4MH Dipteran inclusive ortholog search EOG6J6S0R Insect inclusive ortholog search EOG6FJ75K Arthropod inclusive ortholog search EOG66M91D Metazoa inclusive ortholog search EOG6Z99QG
Orthologs in Drosophila Species (EOG6CC4MH)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG5567     Drosophila simulans   Dsim\GD12368 Y   Drosophila sechellia   Dsec\GM24299 Y   Drosophila erecta   Dere\GG15774 Y   Drosophila yakuba   Dyak\GE22109 Y   Drosophila ananassae   Dana\GF25232 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA18976 Y   Drosophila persimilis   Dper\GL22743 Y   Drosophila willistoni   Dwil\GK21181 Y   Drosophila virilis   Dvir\GJ13944 Y   Drosophila mojavensis   Dmoj\GI13608 Y   Drosophila grimshawi   Dgri\GH14463 Y
Orthologs in non-Drosophila Dipterans (EOG6J6S0R)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL009503   Anopheles gambiae Malaria mosquito  Agam\AGAP011350   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ006772
Orthologs in non-Dipteran Insects (EOG6FJ75K)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB40767   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG012065   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG012066   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG010829   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH16497   Atta cephalotes Leafcutter ant  Acep\ACEP25349   Camponotus floridanus Florida carpenter ant  Cflo\CFLO12675   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL14856   Linepithema humile Argentine ant  Lhum\LH24544   Pogonomyrmex barbatus Red harvester ant  Pbar\PB13671   Solenopsis invicta Red fire ant  Sinv\SINV10435   Acyrthosiphon pisum Pea aphid  Apim\ACYPI005939   Bombyx mori Silkmoth  Bmor\BGIBMGA011791   Pediculus humanus Human body louse  Phum\PHUM085690   Tribolium castaneum Red flour beetle  Tcas\GLEAN_07560
Orthologs in non-Insect Arthropods (EOG66M91D)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\JGI_V11_188403 Y Ixodes scapularis Deer tick  Isca\ISCW005015 Y
Orthologs in non-Arthropod Metazoa (EOG6Z99QG)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\C45E5.1 Y Caenorhabditis elegans Nematode  Cele\F44E7.2 Y Caenorhabditis elegans Nematode  Cele\C53A3.2 Y Caenorhabditis elegans Nematode  Cele\K09H11.7 Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_001441gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_003815gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_010730gn Y Danio rerio Zebrafish  Drer\pgp Y Danio rerio Zebrafish  Drer\ENSDARG00000038315 Y Xenopus tropicalis Western clawed frog  Xtro\pgp Y Gallus gallus Domestic chicken  Ggal\PGP Y Gallus gallus Domestic chicken  Ggal\PDXP Y Gallus gallus Domestic chicken  Ggal\LOC771207 Y Mus musculus House mouse  Mmus\Pgp Y Mus musculus House mouse  Mmus\Pdxp Y Rattus norvegicus Norway rat  Rnor\Pdxp Y Rattus norvegicus Norway rat  Rnor\Pgp Y Homo sapiens Human  Hsap\PGP Y Homo sapiens Human  Hsap\PDXP Y
Human Orthologs (2)
Gene OMIM HGNC Hsap\PGP     Hsap\PDXP
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD12368 Drosophila sechellia Dsec\GM24299 Drosophila erecta Dere\GG15774 Drosophila yakuba Dyak\GE22109 Drosophila ananassae Dana\GF25232 Drosophila pseudoobscura pseudoobscura Dpse\GA18976 Drosophila persimilis Dper\GL22743 Drosophila willistoni Dwil\GK21181 Drosophila virilis Dvir\GJ13944 Drosophila mojavensis Dmoj\GI13608 Drosophila grimshawi Dgri\GH14463
Stocks & Reagents
Stocks Listed in FlyBase ( 8 )
Bloomington	28962 y1 v1; P{TRiP.HM05173}attP2/TM3, Sb1 18918 w1118; PBac{WH}CG5567f05921/TM6B, Tb1
Harvard	- PBac{PB}CG5567c04637 - PBac{RB}CG5567e00280 - PBac{WH}CG5567f05921
VDRC	v106981 P{KK100541}VIE-260B v44318 w1118; P{GD11694}v44318 v44319 w1118; P{GD11694}v44319
Genomic Clones ( 1 )
	BACR17C17 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 129 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GH06744
Other clones	FI11325
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH11934 LP04682 LP04684 LP10716 RE68832 RH43578 RH59372
Other clones	64356 214279.59 CK01.128C.F1 Dmel_dig_009555_0676_0961 Dmel_dig_016768_0653_2791 EC22968 EK054447 EK099621 EP14964 FGC019E06 FGM315G09 RP003007269 RP003007493 RP003015666 RP003025011 RP003035674 RP003045466 RP003048736 RP003071223 RP003077049 RP003086185 RP003097480 RP003104011 RP003106521 RP003113208 RP003120707 RP003121376 RP003132845 RP003133532 RP003140211 RP003159148 RP003159156 RP003161513 RP003162644 RP003163488 RP003170247 RP003176068 RP003176339 RP003178826 RP003181607 RP003181682 RP003184496 RP003187650 RP003195561 RP003198005 RP003198648 RP003203267 RP003210842 RP003213210 RP003217077 RP003220269 RP003220838 RP003231608 RP003253340 RP003262124 RP003262133 RP003277827 RP003278668 RP003284412 RP003285084 RP003287222 RP003287961 RP003310210 RP003319972 RP003320453 RP003320927 RP003322008 RP003327428 RP003329053 RP003329489 RP003332337 RP003332835 RP003339557 RP003343579 RP003345307 RP003346015 RP003347895 RP003351749 RP003353489 RP003353727 RP003368974 RP003369935 RP003371721 RP003377004 RP003396910 RP003406560 RP003421354 RP003423331 RP003423911 RP003430922 RP003445413 RP003463949 RP003469461 RP003471903 RP003486880 RP003495659 RP003499621 RP003501106 RP003506584 RP003516789 RP003518314 RP003530316 RP003533122 RP003542672 RP003544623 RP003557300 RP003564335 RP003564893 RP003569905 RP003581205 RP003590280 RP003605409 RP003621177 RP003623336 RP003623387 RP003639622 RP003652714 RP003663684 RP003666973 RP003682208
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0036760 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 39986
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments	FlyBase curator comment: the insertion in the "f07123" Exelixis line (PBac{WH}MED19f07123) was originally assigned to the CG5567 gene in FBrf0179797, resulting in the "CG5567f07123" (FBal0161267) allele. However, FBrf0184340 shows that the insertion is actually within MED19. (Bloomington Drosophila Stock Center, 2004.11.6)
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_140758 RefSeq (Proteins) • NP_649015 DDBJ / EMBL / GenBank • AAF49296 AAL39201 AI106671 AI402053 AY069056 CZ469388 CZ469389 CZ478174 CZ488550 Entrez Gene - A searchable database of RefSeq genes. • 39986 UniProtKB/TrEMBL • Q8T0U0 Q9VVL5
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • 2-phosphoglycolate phosphatase, eukaryotic (IPR006349) HAD-superfamily hydrolase, subfamily IIA (IPR006357) HAD-like domain (IPR023214) Nitrophenylphosphatase-like domain (IPR023215) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • FI11325
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0036760 DRSC - Results from RNAi screens. • FBgn0036760 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0036760 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG5567-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0036760 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 39986 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 39986 modMine - Data generated by the modENCODE project. • FBgn0036760
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	CG5567 (Cao et al., 2009, Keleman et al., 2009.8.5, Perkins et al., 2009, Japanese National Institute of Genetics, 2012.5.21) Phos5567 (Cao et al., 2009)
Name Synonym
Secondary FlyBase IDs
References ( 20 )
Research paper	Cao et al., 2009, Biochem. Biophys. Res. Commun. 380(1): 188--192 An insect farnesyl phosphatase homologous to the N-terminal domain of soluble epoxide hydrolase. [FBrf0206788] Buffin et al., 2007, Nat. Cell Biol. 9(5): 565--572 Flies without a spindle checkpoint. [FBrf0200956] Pile et al., 2003, J. Biol. Chem. 278(39): 37840--37848 The SIN3 deacetylase complex represses genes encoding mitochondrial proteins: Implications for the regulation of energy metabolism. [FBrf0162185]
Supplementary material	Guruharsha et al., 2011, Cell 147(3): Table S3. [FBrf0218395] The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Mintseris et al., 2009.11.23, DPiM: the Drosophila Protein Interaction Mapping project DPiM: the Drosophila Protein Interaction Mapping project [FBrf0209452] Perkins et al., 2009, Update to TRiP stock collection. Update to TRiP stock collection. [FBrf0208864] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. (Computer file) Genomic mapping of Exelixis insertion collection. (Computer file) [FBrf0184340] Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase. Exelixis insertion alleles that are not in FlyBase. [FBrf0179797] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Gene Disruption Project members, 2001-, (Computer file) (Computer file) [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. (Computer file) Berkeley Drosophila Genome Project. (Computer file) [FBrf0125078]
FlyBase analysis	FlyBase, 1992-, FlyBase curation. FlyBase curation. [FBrf0105495]
Stock list	Japanese National Institute of Genetics, 2012.5.21, RNAi stocks available from NIG-FLY. RNAi stocks available from NIG-FLY. [FBrf0218457]
Website	Fisher et al., 2012, BDGP insitu homepage BDGP insitu homepage [FBrf0219073]
Curated genome annotation	Zhu, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126704]