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Gene Dmel\Aut1

General Information
Symbol	Dmel\Aut1	Species	D. melanogaster
Name	Aut1	Annotation symbol	CG6877
Feature type	protein_coding_gene	FlyBase ID	FBgn0036813
Gene Model Status	Current	Stock availability	5 publicly available
Also Known As	Atg3, Draut1
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	75D8-75D8	Sequence location	3L:18,741,808..18,743,583 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Aut1 is referred to in FlyBase by the symbol Dmel\Aut1 (CG6877, FBgn0036813). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process: autophagy. 8 alleles are reported. The phenotypes of these alleles are annotated with: embryonic/larval fat body; autophagic vacuole. It has one annotated transcript and one annotated polypeptide. Protein features are: Autophagy-related protein 3; Autophagy-related protein 3, C-terminal; Autophagy-related protein 3, N-terminal. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages, during late larval stages, at stages throughout the pupal period. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult organs/tissues expressed at moderate or high levels. Expression at high levels in the following post-embryonic organs or tissues: larval/adult midgut, larval Malpighian tubules, adult heart, larval fat body, virgin spermatheca. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult hindgut, adult Malpighian tubules, adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1635143_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of Aut1. Gene sequence location is 3L:18741808..18743583.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2012_01	Sequence features BKN46001 BKN28666 HFA10736
FB2011_10
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 75D8-75D8   Limits computationally determined from genome sequence between P{PZ}W05014 and P{lacW}l(3)j14E7j14E7
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Aut1 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Aut1-RA FBtr0075055  NM_140802   1200   330
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Aut1-PA   FBpp0074822   37.0   330   4.37     NP_649059   AAF49233
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Autophagy-related protein 3, N-terminal (IPR007134) Autophagy-related protein 3 (IPR007135) Autophagy-related protein 3, C-terminal (IPR019461)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA263529   AE014296 AAF49233   AI062391   AI113960   AI257660   AI293728   AI297137   AI388932   AI517797   AI531139   AW941109   AY119557 AAM50211   AY231658   BG640486   BI212803   BP549709   BP555493   CA804980   CK658406   CL528106   CO156789   CO336763   CZ468476   EC205170   EC261256   EL884668   GH747667   GH748715   GH752049   GH752829   GH755108   GH756260   GH756547   GH760373   GH760806   GH770183   GH771605   GH771652   GH776672   GH776773   GH778022   GH779022   GH779934   GH780216   GH781090   GH783175   GH786070   GH786105   GH787093   GH787567   GH789051   GH789857   GH791831   GH792180   GH795312   GH796373   GH801836   GH802147   GH802534   GH804317   GH809280   GH813001   GH817163   GH818845   GH820701   GH820970   GH826138   GH826236   GH829654   GH832925   GH833130   GH834732   GH835297   GH835861   GH837062   GH841687   GH842114   GH842557   GH843898   GH844389   GH845349   GH846207   GH846287   GH848053   GH848499   GH850529   GH851382   GH852043   GH855690   GH856308   GH859331   GH860017   GH860312   GH863296   GH864663   GH865470   GH865938   GH866024   GH866081   GH866544   GH869797   GH873292   GH873801   GH874963   GH877975   GH878116   GH879147   GH880239   GH881088   GH881592   GH882081   GH882391   GH883428   GH883617   GH883912   GH884033   GH884882   GH892058   GH893237   GH893511   GH893546   GH894472   GH895663   GH897560   GH898467   GH900213   GH902944   GH906160   GH906702   GH907552   GH908351   GH909252   GH909321   GH910864   GH911474   GH912474   GH912523   GH913132   GH913150   GH913937   GH914363   GH914865   GH920110   GH920387   GH921390   GH922305   GH923821   GH926023   GH926861   GH927488   GH927584   GH928405   GH929192   GH929345   GH929821   GH930373   GH936010   GH937352   GH938067   GH938071   GH938497   GH938555   GH938821
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VVS6
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0036813    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0036813 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages, during late larval stages, at stages throughout the pupal period. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0036813 expression level Developmental Stage   Expression Level embryo 00-02hr    4950 embryo 02-04hr    7330 embryo 04-06hr    6088 embryo 06-08hr    5206 embryo 08-10hr    4446 embryo 10-12hr    4108 embryo 12-14hr    3374 embryo 14-16hr    3828 embryo 16-18hr    2915 embryo 18-20hr    1743 embryo 20-22hr    1375 embryo 22-24hr    1382 larva L1    1914 larva L2    1773 larva L3 12hr old    1706 larva L3 puffstage 1-2    3294 larva L3 puffstage 3-6    4344 larva L3 puffstage 7-9    4813 white prepupae new    6434 white prepupae 12hr    6487 white prepupae 24hr    6141 pupae 2d postWPP    4738 pupae 3d postWPP    2489 pupae 4d postWPP    1502 adult male 01day    2434 adult male 05day    2253 adult male 30day    2447 adult female 01day    3103 adult female 05day    2864 adult female 30day    3040 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (4950) embryo 02-04hr  (7330) embryo 04-06hr  (6088) embryo 06-08hr  (5206) embryo 08-10hr  (4446) embryo 10-12hr  (4108) embryo 12-14hr  (3374) embryo 14-16hr  (3828) embryo 16-18hr  (2915) embryo 18-20hr  (1743) embryo 20-22hr  (1375) embryo 22-24hr  (1382) larva L1  (1914) larva L2  (1773) larva L3 12hr old  (1706) larva L3 puffstage 1-2  (3294) larva L3 puffstage 3-6  (4344) larva L3 puffstage 7-9  (4813) white prepupae new  (6434) white prepupae 12hr  (6487) white prepupae 24hr  (6141) pupae 2d postWPP  (4738) pupae 3d postWPP  (2489) pupae 4d postWPP  (1502) adult male 01day  (2434) adult male 05day  (2253) adult male 30day  (2447) adult female 01day  (3103) adult female 05day  (2864) adult female 30day  (3040) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (4950) embryo 02-04hr  (7330) embryo 04-06hr  (6088) embryo 06-08hr  (5206) embryo 08-10hr  (4446) embryo 10-12hr  (4108) embryo 12-14hr  (3374) embryo 14-16hr  (3828) embryo 16-18hr  (2915) embryo 18-20hr  (1743) embryo 20-22hr    1375 embryo 22-24hr    1382 larva L1  (1914) larva L2  (1773) larva L3 12hr old  (1706) larva L3 puffstage 1-2  (3294) larva L3 puffstage 3-6  (4344) larva L3 puffstage 7-9  (4813) white prepupae new  (6434) white prepupae 12hr  (6487) white prepupae 24hr  (6141) pupae 2d postWPP  (4738) pupae 3d postWPP  (2489) pupae 4d postWPP  1502 adult male 01day  (2434) adult male 05day  (2253) adult male 30day  (2447) adult female 01day  (3103) adult female 05day  (2864) adult female 30day  (3040) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    4950 embryo 02-04hr    7330 embryo 04-06hr    6088 embryo 06-08hr    5206 embryo 08-10hr    4446 embryo 10-12hr    4108 embryo 12-14hr    3374 embryo 14-16hr    3828 embryo 16-18hr    2915 embryo 18-20hr    1743 embryo 20-22hr    1375 embryo 22-24hr    1382 larva L1    1914 larva L2    1773 larva L3 12hr old    1706 larva L3 puffstage 1-2    3294 larva L3 puffstage 3-6    4344 larva L3 puffstage 7-9    4813 white prepupae new    6434 white prepupae 12hr    6487 white prepupae 24hr    6141 pupae 2d postWPP    4738 pupae 3d postWPP    2489 pupae 4d postWPP    1502 adult male 01day    2434 adult male 05day    2253 adult male 30day    2447 adult female 01day    3103 adult female 05day    2864 adult female 30day    3040 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    4950 embryo 02-04hr    7330 embryo 04-06hr    6088 embryo 06-08hr    5206 embryo 08-10hr    4446 embryo 10-12hr    4108 embryo 12-14hr    3374 embryo 14-16hr    3828 embryo 16-18hr    2915 embryo 18-20hr    1743 embryo 20-22hr    1375 embryo 22-24hr    1382 larva L1    1914 larva L2    1773 larva L3 12hr old    1706 larva L3 puffstage 1-2    3294 larva L3 puffstage 3-6    4344 larva L3 puffstage 7-9    4813 white prepupae new    6434 white prepupae 12hr    6487 white prepupae 24hr    6141 pupae 2d postWPP    4738 pupae 3d postWPP    2489 pupae 4d postWPP    1502 adult male 01day    2434 adult male 05day    2253 adult male 30day    2447 adult female 01day    3103 adult female 05day    2864 adult female 30day    3040 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0036813 expression level Developmental Stage   Expression Level embryo 00-02hr    4950 embryo 02-04hr    7330 embryo 04-06hr    6088 embryo 06-08hr    5206 embryo 08-10hr    4446 embryo 10-12hr    4108 embryo 12-14hr    3374 embryo 14-16hr    3828 embryo 16-18hr    2915 embryo 18-20hr    1743 embryo 20-22hr    1375 embryo 22-24hr    1382 larva L1    1914 larva L2    1773 larva L3 12hr old    1706 larva L3 puffstage 1-2    3294 larva L3 puffstage 3-6    4344 larva L3 puffstage 7-9    4813 white prepupae new    6434 white prepupae 12hr    6487 white prepupae 24hr    6141 pupae 2d postWPP    4738 pupae 3d postWPP    2489 pupae 4d postWPP    1502 adult male 01day    2434 adult male 05day    2253 adult male 30day    2447 adult female 01day    3103 adult female 05day    2864 adult female 30day    3040 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (4950) embryo 02-04hr  (7330) embryo 04-06hr  (6088) embryo 06-08hr  (5206) embryo 08-10hr  (4446) embryo 10-12hr  (4108) embryo 12-14hr  (3374) embryo 14-16hr  (3828) embryo 16-18hr  (2915) embryo 18-20hr  (1743) embryo 20-22hr  (1375) embryo 22-24hr  (1382) larva L1  (1914) larva L2  (1773) larva L3 12hr old  (1706) larva L3 puffstage 1-2  (3294) larva L3 puffstage 3-6  (4344) larva L3 puffstage 7-9  (4813) white prepupae new  (6434) white prepupae 12hr  (6487) white prepupae 24hr  (6141) pupae 2d postWPP  (4738) pupae 3d postWPP  (2489) pupae 4d postWPP  (1502) adult male 01day  (2434) adult male 05day  (2253) adult male 30day  (2447) adult female 01day  (3103) adult female 05day  (2864) adult female 30day  (3040) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (4950) embryo 02-04hr  (7330) embryo 04-06hr  (6088) embryo 06-08hr  (5206) embryo 08-10hr  (4446) embryo 10-12hr  (4108) embryo 12-14hr  (3374) embryo 14-16hr  (3828) embryo 16-18hr  (2915) embryo 18-20hr  1743 embryo 20-22hr    1375 embryo 22-24hr    1382 larva L1  1914 larva L2  1773 larva L3 12hr old  1706 larva L3 puffstage 1-2  (3294) larva L3 puffstage 3-6  (4344) larva L3 puffstage 7-9  (4813) white prepupae new  (6434) white prepupae 12hr  (6487) white prepupae 24hr  (6141) pupae 2d postWPP  (4738) pupae 3d postWPP  (2489) pupae 4d postWPP  1502 adult male 01day  2434 adult male 05day  2253 adult male 30day  2447 adult female 01day  (3103) adult female 05day  (2864) adult female 30day  (3040) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    4950 embryo 02-04hr    7330 embryo 04-06hr    6088 embryo 06-08hr    5206 embryo 08-10hr    4446 embryo 10-12hr    4108 embryo 12-14hr    3374 embryo 14-16hr    3828 embryo 16-18hr    2915 embryo 18-20hr    1743 embryo 20-22hr    1375 embryo 22-24hr    1382 larva L1    1914 larva L2    1773 larva L3 12hr old    1706 larva L3 puffstage 1-2    3294 larva L3 puffstage 3-6    4344 larva L3 puffstage 7-9    4813 white prepupae new    6434 white prepupae 12hr    6487 white prepupae 24hr    6141 pupae 2d postWPP    4738 pupae 3d postWPP    2489 pupae 4d postWPP    1502 adult male 01day    2434 adult male 05day    2253 adult male 30day    2447 adult female 01day    3103 adult female 05day    2864 adult female 30day    3040 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    4950 embryo 02-04hr    7330 embryo 04-06hr    6088 embryo 06-08hr    5206 embryo 08-10hr    4446 embryo 10-12hr    4108 embryo 12-14hr    3374 embryo 14-16hr    3828 embryo 16-18hr    2915 embryo 18-20hr    1743 embryo 20-22hr    1375 embryo 22-24hr    1382 larva L1    1914 larva L2    1773 larva L3 12hr old    1706 larva L3 puffstage 1-2    3294 larva L3 puffstage 3-6    4344 larva L3 puffstage 7-9    4813 white prepupae new    6434 white prepupae 12hr    6487 white prepupae 24hr    6141 pupae 2d postWPP    4738 pupae 3d postWPP    2489 pupae 4d postWPP    1502 adult male 01day    2434 adult male 05day    2253 adult male 30day    2447 adult female 01day    3103 adult female 05day    2864 adult female 30day    3040 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0036813    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0036813 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult organs/tissues expressed at moderate or high levels. Expression at high levels in the following post-embryonic organs or tissues: larval/adult midgut, larval Malpighian tubules, adult heart, larval fat body, virgin spermatheca. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult hindgut, adult Malpighian tubules, adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0036813 expression level Tissue   Expression Level Larval Central Nervous System    366.65 Larval Midgut    739.7 Larval Hindgut    246.9 Larval Malpighian Tubules    592.3 Larval Fat Body    607.4 Larval Salivary Gland    278.1 Larval Trachea    247.825 Larval Carcass    229.825 Adult Head    387 Adult Eye    453.85 Adult Brain    411.1 Adult Thoracic-Abdominal Ganglion    384.1 Adult Crop    247.1 Adult Midgut    1020 Adult Hindgut    338.2 Adult Malpighian Tubules    460.2 Adult Fat Body    360.8 Adult Salivary Gland    266.6 Adult Heart    528.025 Adult VirginFemale Spermatheca    547.3 Adult InseminatedFemale Spermatheca    493.5 Adult Ovary    311.1 Adult Testis    88.3 Adult Male Accessory Gland    300.2 Adult Carcass    340.7 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    366.65 Larval Midgut  (739.7) Larval Hindgut    246.9 Larval Malpighian Tubules  (592.3) Larval Fat Body  (607.4) Larval Salivary Gland    278.1 Larval Trachea    247.825 Larval Carcass    229.825 Adult Head    387 Adult Eye    453.85 Adult Brain    411.1 Adult Thoracic-Abdominal Ganglion    384.1 Adult Crop    247.1 Adult Midgut  (1020) Adult Hindgut    338.2 Adult Malpighian Tubules    460.2 Adult Fat Body    360.8 Adult Salivary Gland    266.6 Adult Heart  528.025 Adult VirginFemale Spermatheca  (547.3) Adult InseminatedFemale Spermatheca    493.5 Adult Ovary    311.1 Adult Testis    88.3 Adult Male Accessory Gland    300.2 Adult Carcass    340.7 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    366.65 Larval Midgut    739.7 Larval Hindgut    246.9 Larval Malpighian Tubules    592.3 Larval Fat Body    607.4 Larval Salivary Gland    278.1 Larval Trachea    247.825 Larval Carcass    229.825 Adult Head    387 Adult Eye    453.85 Adult Brain    411.1 Adult Thoracic-Abdominal Ganglion    384.1 Adult Crop    247.1 Adult Midgut  1020 Adult Hindgut    338.2 Adult Malpighian Tubules    460.2 Adult Fat Body    360.8 Adult Salivary Gland    266.6 Adult Heart    528.025 Adult VirginFemale Spermatheca    547.3 Adult InseminatedFemale Spermatheca    493.5 Adult Ovary    311.1 Adult Testis    88.3 Adult Male Accessory Gland    300.2 Adult Carcass    340.7 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    366.65 Larval Midgut    739.7 Larval Hindgut    246.9 Larval Malpighian Tubules    592.3 Larval Fat Body    607.4 Larval Salivary Gland    278.1 Larval Trachea    247.825 Larval Carcass    229.825 Adult Head    387 Adult Eye    453.85 Adult Brain    411.1 Adult Thoracic-Abdominal Ganglion    384.1 Adult Crop    247.1 Adult Midgut    1020 Adult Hindgut    338.2 Adult Malpighian Tubules    460.2 Adult Fat Body    360.8 Adult Salivary Gland    266.6 Adult Heart    528.025 Adult VirginFemale Spermatheca    547.3 Adult InseminatedFemale Spermatheca    493.5 Adult Ovary    311.1 Adult Testis    88.3 Adult Male Accessory Gland    300.2 Adult Carcass    340.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0036813 expression level Tissue   Expression Level Larval Central Nervous System    366.65 Larval Midgut    739.7 Larval Hindgut    246.9 Larval Malpighian Tubules    592.3 Larval Fat Body    607.4 Larval Salivary Gland    278.1 Larval Trachea    247.825 Larval Carcass    229.825 Adult Head    387 Adult Eye    453.85 Adult Brain    411.1 Adult Thoracic-Abdominal Ganglion    384.1 Adult Crop    247.1 Adult Midgut    1020 Adult Hindgut    338.2 Adult Malpighian Tubules    460.2 Adult Fat Body    360.8 Adult Salivary Gland    266.6 Adult Heart    528.025 Adult VirginFemale Spermatheca    547.3 Adult InseminatedFemale Spermatheca    493.5 Adult Ovary    311.1 Adult Testis    88.3 Adult Male Accessory Gland    300.2 Adult Carcass    340.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    366.65 Larval Midgut  739.7 Larval Hindgut    246.9 Larval Malpighian Tubules  592.3 Larval Fat Body  607.4 Larval Salivary Gland    278.1 Larval Trachea    247.825 Larval Carcass    229.825 Adult Head    387 Adult Eye    453.85 Adult Brain    411.1 Adult Thoracic-Abdominal Ganglion    384.1 Adult Crop    247.1 Adult Midgut  (1020) Adult Hindgut    338.2 Adult Malpighian Tubules    460.2 Adult Fat Body    360.8 Adult Salivary Gland    266.6 Adult Heart  528.025 Adult VirginFemale Spermatheca  547.3 Adult InseminatedFemale Spermatheca    493.5 Adult Ovary    311.1 Adult Testis    88.3 Adult Male Accessory Gland    300.2 Adult Carcass    340.7 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    366.65 Larval Midgut    739.7 Larval Hindgut    246.9 Larval Malpighian Tubules    592.3 Larval Fat Body    607.4 Larval Salivary Gland    278.1 Larval Trachea    247.825 Larval Carcass    229.825 Adult Head    387 Adult Eye    453.85 Adult Brain    411.1 Adult Thoracic-Abdominal Ganglion    384.1 Adult Crop    247.1 Adult Midgut  1020 Adult Hindgut    338.2 Adult Malpighian Tubules    460.2 Adult Fat Body    360.8 Adult Salivary Gland    266.6 Adult Heart    528.025 Adult VirginFemale Spermatheca    547.3 Adult InseminatedFemale Spermatheca    493.5 Adult Ovary    311.1 Adult Testis    88.3 Adult Male Accessory Gland    300.2 Adult Carcass    340.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    366.65 Larval Midgut    739.7 Larval Hindgut    246.9 Larval Malpighian Tubules    592.3 Larval Fat Body    607.4 Larval Salivary Gland    278.1 Larval Trachea    247.825 Larval Carcass    229.825 Adult Head    387 Adult Eye    453.85 Adult Brain    411.1 Adult Thoracic-Abdominal Ganglion    384.1 Adult Crop    247.1 Adult Midgut    1020 Adult Hindgut    338.2 Adult Malpighian Tubules    460.2 Adult Fat Body    360.8 Adult Salivary Gland    266.6 Adult Heart    528.025 Adult VirginFemale Spermatheca    547.3 Adult InseminatedFemale Spermatheca    493.5 Adult Ovary    311.1 Adult Testis    88.3 Adult Male Accessory Gland    300.2 Adult Carcass    340.7 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    387   NA  Eye    453.85   NA  Brain    411.1   366.65  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    384.1   NA  Crop    247.1   739.7  Midgut    1020   246.9  Hindgut    338.2   592.3  Malpighian Tubules    460.2   607.4  Fat Body    360.8   278.1  Salivary Gland    266.6   NA  Heart    528.025   247.825  Trachea    NA   NA  VirginFemale Spermatheca    547.3   NA  InseminatedFemale Spermatheca    493.5   NA  Ovary    311.1   NA  Testis    88.3   NA  Male Accessory Gland    300.2   229.825  Carcass    340.7 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0036813 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6877-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for Aut1 Stages(s) 4-6 Stages(s) 9-10 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal | larval stage | heat sensitive, with Df(3L)Cat, Scer\GAL4Act5C.PP Aut1dsRNA.Scer\UAS lethal | prepupal stage | heat sensitive, with Df(3L)Cat, Scer\GAL4Act5C.PP Aut1dsRNA.Scer\UAS lethal | pupal stage | heat sensitive, with Df(3L)Cat, Scer\GAL4Act5C.PP Aut1dsRNA.Scer\UAS semi-lethal | heat sensitive, with Scer\GAL4Act5C.PP Aut1dsRNA.Scer\UAS viable Aut1EY08396 viable, with Scer\GAL4pnr-MD237 Aut1GD12064 Sterility Allele fertile Aut1EY08396 Phenotype manifest in Allele autophagic vacuole, with Scer\GAL4Act5C.PP Aut1dsRNA.Scer\UAS embryonic/larval fat body, with Scer\GAL4Act5C.PP Aut1dsRNA.Scer\UAS
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of Aut1 Class Mutagen Stocks Known lesion Aut1c03180 piggyBac transposase 1 -- Aut1EY08396 P-element activity 1 Yes Aut110 P-element activity 0 Yes
Alleles Carried on Transgenic Constructs ( 5 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Aut1 Class Mutagen Stocks Known lesion Aut1GD12064 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Aut1HMS01348 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Aut1KK108666 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Aut1dsRNA.Scer\UAS in vitro construct - regulatory fusion in vitro construct - RNAi 0 Yes Aut1Scer\UAS.cJa in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Partially disrupted in	Df(3L)Aut110 (Scott et al., 2007)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD12064} NA P{KK108666} NA P{TRiP.HMS01348} NA P{UAS-Aut1.IR} NA P{UAS-Aut1.J} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EPgy2}Aut1EY08396 NA miscellaneous insertions PBac{PB}Aut1c03180 NA
Gene Ontology: Function, Process & Cellular Component ( 1 unique term )
Terms Based on Experimental Evidence ( 1 term )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
autophagy inferred from mutant phenotype (Juhasz et al., 2003)
Cellular Component ( 0 terms)
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Aut1 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0036813 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 40044
Orthologs
Genome-wide drosophilid orthologs	Dana\GF23640 Dere\GG13677 Dgri\GH14373 Dmoj\GI11317 Dper\GL24881 Dpse\GA19925 Dsec\GM14991 Dsim\GD14768 Dvir\GJ11573 Dwil\GK12099 Dyak\Aut1
Curated drosophilid orthologs	Dpse\GA19925   Dyak\Aut1
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL000955-PA Aedes aegypti (mosquito) AGAP011582-PA Anopheles gambiae (mosquito) XP_624693.1 Apis mellifera (honey bee) XP_001949218.1 Acyrthosiphon pisum (pea aphid) At5g61500.1 Arabidopsis thaliana (wall cress) 14494 Batrachochytrium dendrobatidis (chytrid fungus) 124834 Branchiostoma floridae (lancelet) XP_001900840.1 Brugia malayi (roundworm nematode) BGIBMGA003767-PA Bombyx mori (silk worm) ENSBTAP00000011976 Bos taurus (bovine) CAL0005067 Candida albicans (a form of yeast) CN25275 Caenorhabditis brenneri (small nematode) CBP03379 Caenorhabditis briggsae (nematode) CE25486 Caenorhabditis elegans (worm) ENSCAFP00000015447 Canis familiaris (dog) CAGL0I05808g Candida glabrata (haploid yeast) Chro.80308 Cryptosporidium hominis (obligate parasite) ENSCINP00000009341 Ciona intestinalis (sea squirt) JA07402 Caenorhabditis japonica (nematode) cn11311 Cryptococcus neoformans (yeast-like fungus) cgd8_2630 Cryptosporidium parvum (protozoan parasite) CPIJ001235 Culex pipens (mosquito) ENSCPOP00000005874 Cavia porcellus (guinea pig) 186904 Chlamidomonas reinhardtii (green alga) RP11757 Caenorhabditis remanei (nematode) ENSCSAVP00000016636 Ciona savignyi (sedentary tunicate) 160445 Capitella spl (polychaete worm) DDB0252605 Dictyostelium discoideum (amoeba) DEHA2D09900g Debaryomyces Hansenii (yeast) 306423 Daphnia pulex (daphnia) ENSDARP00000041303 Danio rerio (zebra fish) ENSECAP00000009961 Equus caballus (horse) XP_654705 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000020167 Gymnopilus aculeatus (mushroom) ENSGALP00000024484 Gallus gallus (chicken) 185193 Hypsipyla robusta (cedar shoot borer) ENSP00000283290 Homo sapiens (human) ISCW007083-PA Ixodes scapularis (deer tick) KLLA0F06402g Kluyveromyces lactis (yeast) 116221 Lottia gigantea (owl limpet) LmjF33.0295 Leishmania major (virus) 28372 Monocosta brevicollis (choanoflagellate) ENSMODP00000022578 Monodelphis domestica (gray opossum) ENSMMUP00000018693 Macaca mulatta (rhesus monkey) ENSMUSP00000023343 Mus musculus (house mouse) 92892 Nematostella vectensis (starlet anemone) XP_001601099.1 Nasonia vitripennis (wasp) ENSOANP00000001709 Ornithorynchus anatinus (platypus) ENSORLP00000024086 Oryzias latipes (japanese killifish) LOC_Os01g10290.1 Oryza sativa (asian rice) PFI0280c Plasmodium falciparum (protozoal parasite) PHUM003270-PA Pediculus humanus (human body louse) PP12135 Pristionchus pacificus (nematode) 183062 Physcomitrella patens (moss) ENSPPYP00000015148 Pongo pygmaeus (orangutan) 78541 Phytophthora ramorum (sudden oak death pathogen) 110627 Phytophthora sojae (root rot pathogen) 836380 Populus trichocarpa (black cottonwood) ENSPTRP00000026253 Pan troglodytes (chimpanzee) PVX_098725 Plasmodium vivax (protozoal parasite) ENSRNOP00000002906 Rattus norvegicus (norway rat) 4775328 Sorghum bicolor (sorghum) YNR007C Saccharomyces cerevisiae (budding yeast) Smp_077400 Schistosoma mansoni (trematode parasite) SPBC3B9.06c Schizosaccharomyces pombe (fission yeast) XP_001175772.1 Strongylocentrotus purpuratus (purple sea urchin) 32195 Trichoplax adhaerens (metazoa) TA03605 Theileria annulata (apicomplexan parasite) XP_967286.2 Tribolium castaneum (red flour beetle) Tc00.1047053509213.130 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053510257.90 Trypanosoma cruzi (parasitic trypanosome) ENSTNIP00000017502 Tetraodon nigroviridis (green spotted pufferfish) TP03_0261 Theileria parva (parasitic protozoan) 35360 Thalassiosira pseudonana (marine diatom) ENSTRUP00000012606 Takifugu rubripes (pufferfish Takifugu) 212.m00063 Tetrahymena thermophila (ciliate protozoa) 95725.m00242 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000005166 Xenopus tropicalis (frog) YALI0E24453g Yarrowia lipolytica (nonconventional yeast) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV13747 LH24135 ISCW007083 FBgn0068528 FBgn0214110 FBgn0198831 FBgn0186442 FBgn0169912 JGI_V11_306423 FBgn0079921 FBgn0162469 FBgn0134078 FBgn0121849 FBgn0105941 FBgn0100634 CPIJ001235 BGIBMGA003767 ACYPI001070 GB12186 AGAP011582 AAEL000955 PB26120 PHUM509570 GLEAN_10917
Stocks & Reagents
Stocks Listed in FlyBase ( 5 )
Bloomington	16429 y1 w67c23; P{EPgy2}Aut1EY08396 34359 y1 sc* v1; P{TRiP.HMS01348}attP2
Harvard	- PBac{PB}Aut1c03180
VDRC	v101364 P{KK108666}VIE-260B v22455 w1118; P{GD12064}v22455
Genomic Clones ( 2 )
	BACR17L05 BACR48N04 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 159 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GH28859
Other clones	DPiM_GH28859 yak-em_CG6877
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH01573 GH10506 GH19984 LD06678 LP06083 LP06930 LP11372 LP15309 RE18042 SD02057 SD11514
Other clones	273583 528241 EN09317 EN13203 ESG0116a.B21_B04 FGM103A07 FGM235E11 IP15930 RP003018116 RP003032101 RP003036036 RP003044487 RP003050892 RP003062353 RP003063306 RP003070911 RP003077489 RP003090836 RP003107500 RP003117398 RP003127377 RP003128054 RP003133447 RP003134983 RP003138778 RP003143088 RP003146054 RP003150701 RP003151407 RP003154974 RP003172093 RP003184876 RP003186252 RP003187089 RP003188687 RP003190792 RP003195850 RP003195960 RP003199938 RP003201290 RP003203189 RP003203722 RP003205317 RP003205350 RP003207243 RP003210129 RP003211224 RP003211724 RP003211909 RP003216915 RP003216978 RP003223264 RP003224253 RP003224933 RP003229555 RP003233896 RP003236507 RP003251329 RP003254113 RP003254544 RP003256677 RP003257158 RP003282617 RP003288960 RP003293321 RP003300610 RP003302740 RP003304623 RP003304758 RP003315061 RP003318448 RP003327361 RP003328315 RP003335209 RP003342912 RP003345434 RP003347891 RP003353905 RP003356328 RP003369950 RP003379988 RP003387221 RP003390187 RP003399094 RP003403591 RP003408138 RP003414254 RP003416844 RP003417461 RP003419024 RP003423222 RP003423429 RP003423733 RP003427989 RP003434871 RP003437542 RP003438037 RP003440479 RP003440550 RP003441133 RP003442059 RP003449183 RP003451209 RP003451242 RP003455337 RP003457900 RP003463776 RP003469098 RP003469293 RP003473179 RP003477756 RP003486897 RP003489455 RP003494684 RP003506615 RP003551531 RP003552184 RP003557525 RP003558999 RP003562931 RP003564330 RP003571367 RP003573667 RP003573699 RP003580643 RP003580739 RP003583180 RP003583350 RP003597930 RP003599187 RP003611670 RP003614927 RP003615955 RP003617556 RP003620869 RP003624713 RP003635464 RP003641967 RP003649911 RP003650132 RP003655632 RP003658798 RP003663669 RP003673533 RP003680780
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0036813 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 40044
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: Aut1 CG6877 (Juhasz et al., 2001)
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_140802 RefSeq (Proteins) • NP_649059 DDBJ / EMBL / GenBank • AAF49233 AAM50211 AI517797 AW941109 AY119557 CL528106 CZ468476 Entrez Gene - A searchable database of RefSeq genes. • 40044 UniProtKB/TrEMBL • Q9VVS6
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Autophagy-related protein 3, N-terminal (IPR007134) Autophagy-related protein 3 (IPR007135) Autophagy-related protein 3, C-terminal (IPR019461)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0036813 DRSC - Results from RNAi screens. • FBgn0036813 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0036813 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6877-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0036813 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 40044 InParanoid A subset of ortholog calls from InParanoid. • AAEL000955-PA Aedes aegypti (mosquito) AGAP011582-PA Anopheles gambiae (mosquito) XP_624693.1 Apis mellifera (honey bee) XP_001949218.1 Acyrthosiphon pisum (pea aphid) At5g61500.1 Arabidopsis thaliana (wall cress) 14494 Batrachochytrium dendrobatidis (chytrid fungus) 124834 Branchiostoma floridae (lancelet) XP_001900840.1 Brugia malayi (roundworm nematode) BGIBMGA003767-PA Bombyx mori (silk worm) ENSBTAP00000011976 Bos taurus (bovine) CAL0005067 Candida albicans (a form of yeast) CN25275 Caenorhabditis brenneri (small nematode) CBP03379 Caenorhabditis briggsae (nematode) CE25486 Caenorhabditis elegans (worm) ENSCAFP00000015447 Canis familiaris (dog) CAGL0I05808g Candida glabrata (haploid yeast) Chro.80308 Cryptosporidium hominis (obligate parasite) ENSCINP00000009341 Ciona intestinalis (sea squirt) JA07402 Caenorhabditis japonica (nematode) cn11311 Cryptococcus neoformans (yeast-like fungus) cgd8_2630 Cryptosporidium parvum (protozoan parasite) CPIJ001235 Culex pipens (mosquito) ENSCPOP00000005874 Cavia porcellus (guinea pig) 186904 Chlamidomonas reinhardtii (green alga) RP11757 Caenorhabditis remanei (nematode) ENSCSAVP00000016636 Ciona savignyi (sedentary tunicate) 160445 Capitella spl (polychaete worm) DDB0252605 Dictyostelium discoideum (amoeba) DEHA2D09900g Debaryomyces Hansenii (yeast) 306423 Daphnia pulex (daphnia) ENSDARP00000041303 Danio rerio (zebra fish) ENSECAP00000009961 Equus caballus (horse) XP_654705 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000020167 Gymnopilus aculeatus (mushroom) ENSGALP00000024484 Gallus gallus (chicken) 185193 Hypsipyla robusta (cedar shoot borer) ENSP00000283290 Homo sapiens (human) ISCW007083-PA Ixodes scapularis (deer tick) KLLA0F06402g Kluyveromyces lactis (yeast) 116221 Lottia gigantea (owl limpet) LmjF33.0295 Leishmania major (virus) 28372 Monocosta brevicollis (choanoflagellate) ENSMODP00000022578 Monodelphis domestica (gray opossum) ENSMMUP00000018693 Macaca mulatta (rhesus monkey) ENSMUSP00000023343 Mus musculus (house mouse) 92892 Nematostella vectensis (starlet anemone) XP_001601099.1 Nasonia vitripennis (wasp) ENSOANP00000001709 Ornithorynchus anatinus (platypus) ENSORLP00000024086 Oryzias latipes (japanese killifish) LOC_Os01g10290.1 Oryza sativa (asian rice) PFI0280c Plasmodium falciparum (protozoal parasite) PHUM003270-PA Pediculus humanus (human body louse) PP12135 Pristionchus pacificus (nematode) 183062 Physcomitrella patens (moss) ENSPPYP00000015148 Pongo pygmaeus (orangutan) 78541 Phytophthora ramorum (sudden oak death pathogen) 110627 Phytophthora sojae (root rot pathogen) 836380 Populus trichocarpa (black cottonwood) ENSPTRP00000026253 Pan troglodytes (chimpanzee) PVX_098725 Plasmodium vivax (protozoal parasite) ENSRNOP00000002906 Rattus norvegicus (norway rat) 4775328 Sorghum bicolor (sorghum) YNR007C Saccharomyces cerevisiae (budding yeast) Smp_077400 Schistosoma mansoni (trematode parasite) SPBC3B9.06c Schizosaccharomyces pombe (fission yeast) XP_001175772.1 Strongylocentrotus purpuratus (purple sea urchin) 32195 Trichoplax adhaerens (metazoa) TA03605 Theileria annulata (apicomplexan parasite) XP_967286.2 Tribolium castaneum (red flour beetle) Tc00.1047053509213.130 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053510257.90 Trypanosoma cruzi (parasitic trypanosome) ENSTNIP00000017502 Tetraodon nigroviridis (green spotted pufferfish) TP03_0261 Theileria parva (parasitic protozoan) 35360 Thalassiosira pseudonana (marine diatom) ENSTRUP00000012606 Takifugu rubripes (pufferfish Takifugu) 212.m00063 Tetrahymena thermophila (ciliate protozoa) 95725.m00242 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000005166 Xenopus tropicalis (frog) YALI0E24453g Yarrowia lipolytica (nonconventional yeast) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 40044 modMine - Data generated by the modENCODE project. • FBgn0036813 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV13747 LH24135 ISCW007083 FBgn0068528 FBgn0214110 FBgn0198831 FBgn0186442 FBgn0169912 JGI_V11_306423 FBgn0079921 FBgn0162469 FBgn0134078 FBgn0121849 FBgn0105941 FBgn0100634 CPIJ001235 BGIBMGA003767 ACYPI001070 GB12186 AGAP011582 AAEL000955 PB26120 PHUM509570 GLEAN_10917
Synonyms & Secondary IDs ( 6 )
Reported As
Symbol Synonym	Atg3 (Scott et al., 2004, Scott et al., 2007) atg3 (Kadandale and Kiger, 2008) Aut1 (Scott et al., 2007, Kim et al., 2010) CG6877 (Juhasz et al., 2003, Juhasz et al., 2001, Keleman et al., 2009.8.5, Ni et al., 2010.12.1) Draut1 (Juhasz et al., 2003, Juhasz et al., 2001)
Name Synonym	Aut1   Autophagy-specific gene 3 (Scott et al., 2004)
Secondary FlyBase IDs
References ( 14 )
Research paper	Kim et al., 2010, BMC Cell Biol. 11: 9 A genetic screen for modifiers of Drosophila caspase Dcp-1 reveals caspase involvement in autophagy and novel caspase-related genes. [FBrf0209948] Juhasz et al., 2003, FEBS Lett. 543(1-3): 154--158 The Drosophila homolog of Aut1 is essential for autophagy and development. [FBrf0159857]
Supplementary material	Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Scott et al., 2007, Curr. Biol. 17(1): Supplemental Data. [FBrf0208086] Scott et al., 2004, Dev. Cell 7(2): Supplementary material. [FBrf0183440]
Personal communication to FlyBase	Ni et al., 2010.12.1, A genome-scale shRNA resource for transgenic RNAi in Drosophila. A genome-scale shRNA resource for transgenic RNAi in Drosophila. [FBrf0212437] Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327]
Abstract	Kadandale and Kiger, 2008, A. Dros. Res. Conf. 49: 61 Eating yourcellf into shape: Atg1 and autophagy in cell shape changes. [FBrf0203489] Juhasz et al., 2001, Europ. Dros. Res. Conf. 17: H10 Draut1 is essential for macroautophagy and for postembryonal development in Drosophila melanogaster. [FBrf0138034]
Computer file	Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. Genomic mapping of Exelixis insertion collection. [FBrf0184340] Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]