This gene is referred to in FlyBase by the symbol Dmel\CG6841 (FBgn0036828). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: binding. There is experimental evidence that it is involved in the biological process: regulation of alternative nuclear mRNA splicing, via spliceosome; neurogenesis. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: PRP1 splicing factor, N-terminal; RNA-processing protein, HAT helix; Tetratricopeptide repeat-containing; Tetratricopeptide-like helical. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-12 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, adult ovary. Comments on Affy2 ProbeSet: ProbeSet 1628665_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG6841. Gene sequence location is 3L:18898474..18902074.
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modENCODE Temporal Expression Data for FBgn0036828
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-12 hour embryonic stages.
[download data (TSV)]
Guide to modENCODE expression level colors
No expression (0 - 0)
Extremely low expression (1 - 10)
Very low expression (11 - 100)
Low expression (101 - 400)
Moderate expression (401 - 1400)
Moderately high expression (1401 - 4000)
High expression (4001 - 10000)
Very high expression (10001 - 100000)
Extremely high expression (100001 - 2000000)
Linear, scaled to maximum FBgn0036828 expression level
Developmental Stage
Expression Level
embryo 00-02hr
2244
embryo 02-04hr
1572
embryo 04-06hr
2131
embryo 06-08hr
1869
embryo 08-10hr
1429
embryo 10-12hr
1361
embryo 12-14hr
938
embryo 14-16hr
638
embryo 16-18hr
469
embryo 18-20hr
340
embryo 20-22hr
377
embryo 22-24hr
393
larva L1
541
larva L2
555
larva L3 12hr old
411
larva L3 puffstage 1-2
356
larva L3 puffstage 3-6
514
larva L3 puffstage 7-9
624
white prepupae new
637
white prepupae 12hr
706
white prepupae 24hr
856
pupae 2d postWPP
639
pupae 3d postWPP
364
pupae 4d postWPP
217
adult male 01day
399
adult male 05day
478
adult male 30day
435
adult female 01day
663
adult female 05day
1281
adult female 30day
1351
Expression Level Scale
None
Extremely low
Very low
Low
Moderate
Moderately high
Linear, scaled to Very low expression
Developmental Stage
Expression Level
embryo 00-02hr
(2244)
embryo 02-04hr
(1572)
embryo 04-06hr
(2131)
embryo 06-08hr
(1869)
embryo 08-10hr
(1429)
embryo 10-12hr
(1361)
embryo 12-14hr
(938)
embryo 14-16hr
(638)
embryo 16-18hr
(469)
embryo 18-20hr
(340)
embryo 20-22hr
(377)
embryo 22-24hr
(393)
larva L1
(541)
larva L2
(555)
larva L3 12hr old
(411)
larva L3 puffstage 1-2
(356)
larva L3 puffstage 3-6
(514)
larva L3 puffstage 7-9
(624)
white prepupae new
(637)
white prepupae 12hr
(706)
white prepupae 24hr
(856)
pupae 2d postWPP
(639)
pupae 3d postWPP
(364)
pupae 4d postWPP
(217)
adult male 01day
(399)
adult male 05day
(478)
adult male 30day
(435)
adult female 01day
(663)
adult female 05day
(1281)
adult female 30day
(1351)
Expression Level Scale
None
Extremely low
Very low
Low
Linear, scaled to Moderate expression
Developmental Stage
Expression Level
embryo 00-02hr
(2244)
embryo 02-04hr
(1572)
embryo 04-06hr
(2131)
embryo 06-08hr
(1869)
embryo 08-10hr
1429
embryo 10-12hr
1361
embryo 12-14hr
938
embryo 14-16hr
638
embryo 16-18hr
469
embryo 18-20hr
340
embryo 20-22hr
377
embryo 22-24hr
393
larva L1
541
larva L2
555
larva L3 12hr old
411
larva L3 puffstage 1-2
356
larva L3 puffstage 3-6
514
larva L3 puffstage 7-9
624
white prepupae new
637
white prepupae 12hr
706
white prepupae 24hr
856
pupae 2d postWPP
639
pupae 3d postWPP
364
pupae 4d postWPP
217
adult male 01day
399
adult male 05day
478
adult male 30day
435
adult female 01day
663
adult female 05day
1281
adult female 30day
1351
Expression Level Scale
None
Extremely low
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Developmental Stage
Expression Level
embryo 00-02hr
2244
embryo 02-04hr
1572
embryo 04-06hr
2131
embryo 06-08hr
1869
embryo 08-10hr
1429
embryo 10-12hr
1361
embryo 12-14hr
938
embryo 14-16hr
638
embryo 16-18hr
469
embryo 18-20hr
340
embryo 20-22hr
377
embryo 22-24hr
393
larva L1
541
larva L2
555
larva L3 12hr old
411
larva L3 puffstage 1-2
356
larva L3 puffstage 3-6
514
larva L3 puffstage 7-9
624
white prepupae new
637
white prepupae 12hr
706
white prepupae 24hr
856
pupae 2d postWPP
639
pupae 3d postWPP
364
pupae 4d postWPP
217
adult male 01day
399
adult male 05day
478
adult male 30day
435
adult female 01day
663
adult female 05day
1281
adult female 30day
1351
Expression Level Scale
None
Extremely low
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Developmental Stage
Expression Level
embryo 00-02hr
2244
embryo 02-04hr
1572
embryo 04-06hr
2131
embryo 06-08hr
1869
embryo 08-10hr
1429
embryo 10-12hr
1361
embryo 12-14hr
938
embryo 14-16hr
638
embryo 16-18hr
469
embryo 18-20hr
340
embryo 20-22hr
377
embryo 22-24hr
393
larva L1
541
larva L2
555
larva L3 12hr old
411
larva L3 puffstage 1-2
356
larva L3 puffstage 3-6
514
larva L3 puffstage 7-9
624
white prepupae new
637
white prepupae 12hr
706
white prepupae 24hr
856
pupae 2d postWPP
639
pupae 3d postWPP
364
pupae 4d postWPP
217
adult male 01day
399
adult male 05day
478
adult male 30day
435
adult female 01day
663
adult female 05day
1281
adult female 30day
1351
Expression Level Scale
None
Extremely low
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
log, scaled to maximum FBgn0036828 expression level
Developmental Stage
Expression Level
embryo 00-02hr
2244
embryo 02-04hr
1572
embryo 04-06hr
2131
embryo 06-08hr
1869
embryo 08-10hr
1429
embryo 10-12hr
1361
embryo 12-14hr
938
embryo 14-16hr
638
embryo 16-18hr
469
embryo 18-20hr
340
embryo 20-22hr
377
embryo 22-24hr
393
larva L1
541
larva L2
555
larva L3 12hr old
411
larva L3 puffstage 1-2
356
larva L3 puffstage 3-6
514
larva L3 puffstage 7-9
624
white prepupae new
637
white prepupae 12hr
706
white prepupae 24hr
856
pupae 2d postWPP
639
pupae 3d postWPP
364
pupae 4d postWPP
217
adult male 01day
399
adult male 05day
478
adult male 30day
435
adult female 01day
663
adult female 05day
1281
adult female 30day
1351
Expression Level Scale
None
Extremely low
Very low
Low
Moderate
Moderately high
High
log, scaled to Very low expression
Developmental Stage
Expression Level
embryo 00-02hr
(2244)
embryo 02-04hr
(1572)
embryo 04-06hr
(2131)
embryo 06-08hr
(1869)
embryo 08-10hr
(1429)
embryo 10-12hr
(1361)
embryo 12-14hr
(938)
embryo 14-16hr
(638)
embryo 16-18hr
(469)
embryo 18-20hr
(340)
embryo 20-22hr
(377)
embryo 22-24hr
(393)
larva L1
(541)
larva L2
(555)
larva L3 12hr old
(411)
larva L3 puffstage 1-2
(356)
larva L3 puffstage 3-6
(514)
larva L3 puffstage 7-9
(624)
white prepupae new
(637)
white prepupae 12hr
(706)
white prepupae 24hr
(856)
pupae 2d postWPP
(639)
pupae 3d postWPP
(364)
pupae 4d postWPP
(217)
adult male 01day
(399)
adult male 05day
(478)
adult male 30day
(435)
adult female 01day
(663)
adult female 05day
(1281)
adult female 30day
(1351)
Expression Level Scale
None
Extremely low
Very low
Low
log, scaled to Moderate expression
Developmental Stage
Expression Level
embryo 00-02hr
2244
embryo 02-04hr
1572
embryo 04-06hr
2131
embryo 06-08hr
1869
embryo 08-10hr
1429
embryo 10-12hr
1361
embryo 12-14hr
938
embryo 14-16hr
638
embryo 16-18hr
469
embryo 18-20hr
340
embryo 20-22hr
377
embryo 22-24hr
393
larva L1
541
larva L2
555
larva L3 12hr old
411
larva L3 puffstage 1-2
356
larva L3 puffstage 3-6
514
larva L3 puffstage 7-9
624
white prepupae new
637
white prepupae 12hr
706
white prepupae 24hr
856
pupae 2d postWPP
639
pupae 3d postWPP
364
pupae 4d postWPP
217
adult male 01day
399
adult male 05day
478
adult male 30day
435
adult female 01day
663
adult female 05day
1281
adult female 30day
1351
Expression Level Scale
None
Extremely low
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Developmental Stage
Expression Level
embryo 00-02hr
2244
embryo 02-04hr
1572
embryo 04-06hr
2131
embryo 06-08hr
1869
embryo 08-10hr
1429
embryo 10-12hr
1361
embryo 12-14hr
938
embryo 14-16hr
638
embryo 16-18hr
469
embryo 18-20hr
340
embryo 20-22hr
377
embryo 22-24hr
393
larva L1
541
larva L2
555
larva L3 12hr old
411
larva L3 puffstage 1-2
356
larva L3 puffstage 3-6
514
larva L3 puffstage 7-9
624
white prepupae new
637
white prepupae 12hr
706
white prepupae 24hr
856
pupae 2d postWPP
639
pupae 3d postWPP
364
pupae 4d postWPP
217
adult male 01day
399
adult male 05day
478
adult male 30day
435
adult female 01day
663
adult female 05day
1281
adult female 30day
1351
Expression Level Scale
None
Extremely low
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Developmental Stage
Expression Level
embryo 00-02hr
2244
embryo 02-04hr
1572
embryo 04-06hr
2131
embryo 06-08hr
1869
embryo 08-10hr
1429
embryo 10-12hr
1361
embryo 12-14hr
938
embryo 14-16hr
638
embryo 16-18hr
469
embryo 18-20hr
340
embryo 20-22hr
377
embryo 22-24hr
393
larva L1
541
larva L2
555
larva L3 12hr old
411
larva L3 puffstage 1-2
356
larva L3 puffstage 3-6
514
larva L3 puffstage 7-9
624
white prepupae new
637
white prepupae 12hr
706
white prepupae 24hr
856
pupae 2d postWPP
639
pupae 3d postWPP
364
pupae 4d postWPP
217
adult male 01day
399
adult male 05day
478
adult male 30day
435
adult female 01day
663
adult female 05day
1281
adult female 30day
1351
Expression Level Scale
None
Extremely low
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Developmental Stage
Expression Level
embryo 00-02hr
embryo 02-04hr
embryo 04-06hr
embryo 06-08hr
embryo 08-10hr
embryo 10-12hr
embryo 12-14hr
embryo 14-16hr
embryo 16-18hr
embryo 18-20hr
embryo 20-22hr
embryo 22-24hr
larva L1
larva L2
larva L3 12hr old
larva L3 puffstage 1-2
larva L3 puffstage 3-6
larva L3 puffstage 7-9
white prepupae new
white prepupae 12hr
white prepupae 24hr
pupae 2d postWPP
pupae 3d postWPP
pupae 4d postWPP
adult male 01day
adult male 05day
adult male 30day
adult female 01day
adult female 05day
adult female 30day
FlyAtlas Anatomical Expression Data for FBgn0036828
Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, adult ovary.
[download data (TSV)]
Guide to FlyAtlas expression level colors
No expression (0 - 9.999)
Low expression (10 - 99.999)
Moderate expression (100 - 499.999)
High level expression (500 - 999.999)
Very high expression (1000 - 25000)
Linear, scaled to maximum FBgn0036828 expression level
Tissue
Expression Level
Larval Central Nervous System
193.65
Larval Midgut
51
Larval Hindgut
70.9
Larval Malpighian Tubules
66.2
Larval Fat Body
51.9
Larval Salivary Gland
88.7
Larval Trachea
84.1
Larval Carcass
63.475
Adult Head
63.6
Adult Eye
73.55
Adult Brain
113.2
Adult Thoracic-Abdominal Ganglion
80.7
Adult Crop
59.3
Adult Midgut
44.6
Adult Hindgut
57
Adult Malpighian Tubules
51
Adult Fat Body
59.1
Adult Salivary Gland
89.8
Adult Heart
48.175
Adult VirginFemale Spermatheca
78.3
Adult InseminatedFemale Spermatheca
82
Adult Ovary
190.2
Adult Testis
38.5
Adult Male Accessory Gland
66.3
Adult Carcass
43.5
Expression Level Scale
None
Low
Moderate
Linear, scaled to Moderate expression
Tissue
Expression Level
Larval Central Nervous System
193.65
Larval Midgut
51
Larval Hindgut
70.9
Larval Malpighian Tubules
66.2
Larval Fat Body
51.9
Larval Salivary Gland
88.7
Larval Trachea
84.1
Larval Carcass
63.475
Adult Head
63.6
Adult Eye
73.55
Adult Brain
113.2
Adult Thoracic-Abdominal Ganglion
80.7
Adult Crop
59.3
Adult Midgut
44.6
Adult Hindgut
57
Adult Malpighian Tubules
51
Adult Fat Body
59.1
Adult Salivary Gland
89.8
Adult Heart
48.175
Adult VirginFemale Spermatheca
78.3
Adult InseminatedFemale Spermatheca
82
Adult Ovary
190.2
Adult Testis
38.5
Adult Male Accessory Gland
66.3
Adult Carcass
43.5
Expression Level Scale
None
Low
Moderate
High
Linear, scaled to High level expression
Tissue
Expression Level
Larval Central Nervous System
193.65
Larval Midgut
51
Larval Hindgut
70.9
Larval Malpighian Tubules
66.2
Larval Fat Body
51.9
Larval Salivary Gland
88.7
Larval Trachea
84.1
Larval Carcass
63.475
Adult Head
63.6
Adult Eye
73.55
Adult Brain
113.2
Adult Thoracic-Abdominal Ganglion
80.7
Adult Crop
59.3
Adult Midgut
44.6
Adult Hindgut
57
Adult Malpighian Tubules
51
Adult Fat Body
59.1
Adult Salivary Gland
89.8
Adult Heart
48.175
Adult VirginFemale Spermatheca
78.3
Adult InseminatedFemale Spermatheca
82
Adult Ovary
190.2
Adult Testis
38.5
Adult Male Accessory Gland
66.3
Adult Carcass
43.5
Expression Level Scale
None
Low
Moderate
High
Very high
Linear, scaled to Very high expression
Tissue
Expression Level
Larval Central Nervous System
193.65
Larval Midgut
51
Larval Hindgut
70.9
Larval Malpighian Tubules
66.2
Larval Fat Body
51.9
Larval Salivary Gland
88.7
Larval Trachea
84.1
Larval Carcass
63.475
Adult Head
63.6
Adult Eye
73.55
Adult Brain
113.2
Adult Thoracic-Abdominal Ganglion
80.7
Adult Crop
59.3
Adult Midgut
44.6
Adult Hindgut
57
Adult Malpighian Tubules
51
Adult Fat Body
59.1
Adult Salivary Gland
89.8
Adult Heart
48.175
Adult VirginFemale Spermatheca
78.3
Adult InseminatedFemale Spermatheca
82
Adult Ovary
190.2
Adult Testis
38.5
Adult Male Accessory Gland
66.3
Adult Carcass
43.5
Expression Level Scale
None
Low
Moderate
High
Very high
log, scaled to maximum FBgn0036828 expression level
Tissue
Expression Level
Larval Central Nervous System
193.65
Larval Midgut
51
Larval Hindgut
70.9
Larval Malpighian Tubules
66.2
Larval Fat Body
51.9
Larval Salivary Gland
88.7
Larval Trachea
84.1
Larval Carcass
63.475
Adult Head
63.6
Adult Eye
73.55
Adult Brain
113.2
Adult Thoracic-Abdominal Ganglion
80.7
Adult Crop
59.3
Adult Midgut
44.6
Adult Hindgut
57
Adult Malpighian Tubules
51
Adult Fat Body
59.1
Adult Salivary Gland
89.8
Adult Heart
48.175
Adult VirginFemale Spermatheca
78.3
Adult InseminatedFemale Spermatheca
82
Adult Ovary
190.2
Adult Testis
38.5
Adult Male Accessory Gland
66.3
Adult Carcass
43.5
Expression Level Scale
None
Low
Moderate
log, scaled to Moderate expression
Tissue
Expression Level
Larval Central Nervous System
193.65
Larval Midgut
51
Larval Hindgut
70.9
Larval Malpighian Tubules
66.2
Larval Fat Body
51.9
Larval Salivary Gland
88.7
Larval Trachea
84.1
Larval Carcass
63.475
Adult Head
63.6
Adult Eye
73.55
Adult Brain
113.2
Adult Thoracic-Abdominal Ganglion
80.7
Adult Crop
59.3
Adult Midgut
44.6
Adult Hindgut
57
Adult Malpighian Tubules
51
Adult Fat Body
59.1
Adult Salivary Gland
89.8
Adult Heart
48.175
Adult VirginFemale Spermatheca
78.3
Adult InseminatedFemale Spermatheca
82
Adult Ovary
190.2
Adult Testis
38.5
Adult Male Accessory Gland
66.3
Adult Carcass
43.5
Expression Level Scale
None
Low
Moderate
High
log, scaled to High level expression
Tissue
Expression Level
Larval Central Nervous System
193.65
Larval Midgut
51
Larval Hindgut
70.9
Larval Malpighian Tubules
66.2
Larval Fat Body
51.9
Larval Salivary Gland
88.7
Larval Trachea
84.1
Larval Carcass
63.475
Adult Head
63.6
Adult Eye
73.55
Adult Brain
113.2
Adult Thoracic-Abdominal Ganglion
80.7
Adult Crop
59.3
Adult Midgut
44.6
Adult Hindgut
57
Adult Malpighian Tubules
51
Adult Fat Body
59.1
Adult Salivary Gland
89.8
Adult Heart
48.175
Adult VirginFemale Spermatheca
78.3
Adult InseminatedFemale Spermatheca
82
Adult Ovary
190.2
Adult Testis
38.5
Adult Male Accessory Gland
66.3
Adult Carcass
43.5
Expression Level Scale
None
Low
Moderate
High
Very high
log, scaled to Very high expression
Tissue
Expression Level
Larval Central Nervous System
193.65
Larval Midgut
51
Larval Hindgut
70.9
Larval Malpighian Tubules
66.2
Larval Fat Body
51.9
Larval Salivary Gland
88.7
Larval Trachea
84.1
Larval Carcass
63.475
Adult Head
63.6
Adult Eye
73.55
Adult Brain
113.2
Adult Thoracic-Abdominal Ganglion
80.7
Adult Crop
59.3
Adult Midgut
44.6
Adult Hindgut
57
Adult Malpighian Tubules
51
Adult Fat Body
59.1
Adult Salivary Gland
89.8
Adult Heart
48.175
Adult VirginFemale Spermatheca
78.3
Adult InseminatedFemale Spermatheca
82
Adult Ovary
190.2
Adult Testis
38.5
Adult Male Accessory Gland
66.3
Adult Carcass
43.5
Expression Level Scale
None
Low
Moderate
High
Very high
Heatmap
Tissue
Expression Level
Larval Central Nervous System
Larval Midgut
Larval Hindgut
Larval Malpighian Tubules
Larval Fat Body
Larval Salivary Gland
Larval Trachea
Larval Carcass
Adult Head
Adult Eye
Adult Brain
Adult Thoracic-Abdominal Ganglion
Adult Crop
Adult Midgut
Adult Hindgut
Adult Malpighian Tubules
Adult Fat Body
Adult Salivary Gland
Adult Heart
Adult VirginFemale Spermatheca
Adult InseminatedFemale Spermatheca
Adult Ovary
Adult Testis
Adult Male Accessory Gland
Adult Carcass
FlyAtlas Organ/Tissue Expression, larval vs. adult
Please Note FlyBase no
longer curates genomic clone accessions so this list
may not be complete
cDNA Clones ( 73 )
Please Note
This section lists
cDNAs and ESTs that fall within the genomic extent
of the gene model, which may include cDNAs and ESTs
of genes within introns, or of overlapping genes.
Please see GBrowse for alignment of the cDNAs and ESTs
to the gene model.