A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene Dmel\Cpr78Cb

General Information
SymbolDmel\Cpr78CbSpeciesD. melanogaster
NameCuticular protein 78CbAnnotation symbolCG7663
Feature typeprotein_coding_geneFlyBase IDFBgn0037068
Gene Model StatusCurrent Stock availability 2 publicly available
Genomic Location
Chromosome (arm)3LRecombination map
Cytogenetic map78C6-78C6Sequence location3L:21,287,592..21,289,798 [+]

Genomic Maps

GBrowse View Help
Beta
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene Cuticular protein 78Cb is referred to in FlyBase by the symbol Dmel\Cpr78Cb (CG7663, FBgn0037068). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: structural constituent of chitin-based cuticle. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Insect cuticle protein. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression. Peak expression observed within 18-24 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: No expression detected in any larval or adult organs/tissues. Comments on Affy2 ProbeSet: ProbeSet 1633426_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of Cpr78Cb. Gene sequence location is 3L:21287592..21289798.
User Contributed Data
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
78C6-78C6  
Limits computationally determined from genome sequence between P{lacW}l(3)j1B10j1B10 and P{lacW}l(3)j2C4j2C4  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\Cpr78Cb for information on other features GBrowse View Help
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0078409 FBtr0333394 FBtr0078337 FBtr0078408 FBtr0321302 FBpp0078063 FBpp0305586 FBpp0077993 FBpp0078062 FBti0114269
Comments on Gene Model
Gene model reviewed during 5.46
Gene model reviewed during 5.45
Gene model reviewed during 5.43
Low-frequency RNA-seq exon junction(s) not annotated.
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0078337
  1220
  140
FBtr0333394
  2124
  140
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0077993  
15.9  
140  
6.97  
FBpp0305586  
15.9  
140  
6.97  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
Comment:anlage in statu nascendi
Comment:anlage in statu nascendi
Comment:anlage in statu nascendi
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
hide Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term
References
hide Expression Deduced from Reporters
hide High-Throughput Expression Data
Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
hide FlyAtlas Anatomy Microarray

FlyAtlas Anatomical Expression Data

(FlyAtlas-RNA.adult)

(FlyAtlas-RNA.larva)


   Styles
   Scales

Summary of FlyAtlas Anatomical Expression Data: No expression detected in any larval or adult organs/tissues.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (>999.999)

Linear, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 3.575
Larval Midgut
 
 3.9
Larval Hindgut
 
 3.4
Larval Malpighian Tubules
 
 2.5
Larval Fat Body
 
 3.2
Larval Salivary Gland
 
 4.6
Larval Trachea
 
 5.175
Larval Carcass
 
 10.9
Adult Head
 
 4
Adult Eye
 
 3.775
Adult Brain
 
 3.2
Adult Thoracic-Abdominal Ganglion
 
 2.6
Adult Crop
 
 4.8
Adult Midgut
 
 3.8
Adult Hindgut
 
 3.2
Adult Malpighian Tubules
 
 3
Adult Fat Body
 
 6.9
Adult Salivary Gland
 
 18
Adult Heart
 
 1.3
Adult VirginFemale Spermatheca
 
 5.5
Adult InseminatedFemale Spermatheca
 
 2.3
Adult Ovary
 
 1.6
Adult Testis
 
 1.2
Adult Male Accessory Gland
 
 14.4
Adult Carcass
 
 8.4
Expression Level Scale
 None 
 Low 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 3.575
Larval Midgut
 
 3.9
Larval Hindgut
 
 3.4
Larval Malpighian Tubules
 
 2.5
Larval Fat Body
 
 3.2
Larval Salivary Gland
 
 4.6
Larval Trachea
 
 5.175
Larval Carcass
 
 10.9
Adult Head
 
 4
Adult Eye
 
 3.775
Adult Brain
 
 3.2
Adult Thoracic-Abdominal Ganglion
 
 2.6
Adult Crop
 
 4.8
Adult Midgut
 
 3.8
Adult Hindgut
 
 3.2
Adult Malpighian Tubules
 
 3
Adult Fat Body
 
 6.9
Adult Salivary Gland
 
 18
Adult Heart
 
 1.3
Adult VirginFemale Spermatheca
 
 5.5
Adult InseminatedFemale Spermatheca
 
 2.3
Adult Ovary
 
 1.6
Adult Testis
 
 1.2
Adult Male Accessory Gland
 
 14.4
Adult Carcass
 
 8.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 3.575
Larval Midgut
 
 3.9
Larval Hindgut
 
 3.4
Larval Malpighian Tubules
 
 2.5
Larval Fat Body
 
 3.2
Larval Salivary Gland
 
 4.6
Larval Trachea
 
 5.175
Larval Carcass
 
 10.9
Adult Head
 
 4
Adult Eye
 
 3.775
Adult Brain
 
 3.2
Adult Thoracic-Abdominal Ganglion
 
 2.6
Adult Crop
 
 4.8
Adult Midgut
 
 3.8
Adult Hindgut
 
 3.2
Adult Malpighian Tubules
 
 3
Adult Fat Body
 
 6.9
Adult Salivary Gland
 
 18
Adult Heart
 
 1.3
Adult VirginFemale Spermatheca
 
 5.5
Adult InseminatedFemale Spermatheca
 
 2.3
Adult Ovary
 
 1.6
Adult Testis
 
 1.2
Adult Male Accessory Gland
 
 14.4
Adult Carcass
 
 8.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 3.575
Larval Midgut
 
 3.9
Larval Hindgut
 
 3.4
Larval Malpighian Tubules
 
 2.5
Larval Fat Body
 
 3.2
Larval Salivary Gland
 
 4.6
Larval Trachea
 
 5.175
Larval Carcass
 
 10.9
Adult Head
 
 4
Adult Eye
 
 3.775
Adult Brain
 
 3.2
Adult Thoracic-Abdominal Ganglion
 
 2.6
Adult Crop
 
 4.8
Adult Midgut
 
 3.8
Adult Hindgut
 
 3.2
Adult Malpighian Tubules
 
 3
Adult Fat Body
 
 6.9
Adult Salivary Gland
 
 18
Adult Heart
 
 1.3
Adult VirginFemale Spermatheca
 
 5.5
Adult InseminatedFemale Spermatheca
 
 2.3
Adult Ovary
 
 1.6
Adult Testis
 
 1.2
Adult Male Accessory Gland
 
 14.4
Adult Carcass
 
 8.4
Expression Level Scale
 Very high 
log, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 3.575
Larval Midgut
 
 3.9
Larval Hindgut
 
 3.4
Larval Malpighian Tubules
 
 2.5
Larval Fat Body
 
 3.2
Larval Salivary Gland
 
 4.6
Larval Trachea
 
 5.175
Larval Carcass
 
 10.9
Adult Head
 
 4
Adult Eye
 
 3.775
Adult Brain
 
 3.2
Adult Thoracic-Abdominal Ganglion
 
 2.6
Adult Crop
 
 4.8
Adult Midgut
 
 3.8
Adult Hindgut
 
 3.2
Adult Malpighian Tubules
 
 3
Adult Fat Body
 
 6.9
Adult Salivary Gland
 
 18
Adult Heart
 
 1.3
Adult VirginFemale Spermatheca
 
 5.5
Adult InseminatedFemale Spermatheca
 
 2.3
Adult Ovary
 
 1.6
Adult Testis
 
 1.2
Adult Male Accessory Gland
 
 14.4
Adult Carcass
 
 8.4
Expression Level Scale
 None 
 Low 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 3.575
Larval Midgut
 
 3.9
Larval Hindgut
 
 3.4
Larval Malpighian Tubules
 
 2.5
Larval Fat Body
 
 3.2
Larval Salivary Gland
 
 4.6
Larval Trachea
 
 5.175
Larval Carcass
 
 10.9
Adult Head
 
 4
Adult Eye
 
 3.775
Adult Brain
 
 3.2
Adult Thoracic-Abdominal Ganglion
 
 2.6
Adult Crop
 
 4.8
Adult Midgut
 
 3.8
Adult Hindgut
 
 3.2
Adult Malpighian Tubules
 
 3
Adult Fat Body
 
 6.9
Adult Salivary Gland
 
 18
Adult Heart
 
 1.3
Adult VirginFemale Spermatheca
 
 5.5
Adult InseminatedFemale Spermatheca
 
 2.3
Adult Ovary
 
 1.6
Adult Testis
 
 1.2
Adult Male Accessory Gland
 
 14.4
Adult Carcass
 
 8.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 3.575
Larval Midgut
 
 3.9
Larval Hindgut
 
 3.4
Larval Malpighian Tubules
 
 2.5
Larval Fat Body
 
 3.2
Larval Salivary Gland
 
 4.6
Larval Trachea
 
 5.175
Larval Carcass
 
 10.9
Adult Head
 
 4
Adult Eye
 
 3.775
Adult Brain
 
 3.2
Adult Thoracic-Abdominal Ganglion
 
 2.6
Adult Crop
 
 4.8
Adult Midgut
 
 3.8
Adult Hindgut
 
 3.2
Adult Malpighian Tubules
 
 3
Adult Fat Body
 
 6.9
Adult Salivary Gland
 
 18
Adult Heart
 
 1.3
Adult VirginFemale Spermatheca
 
 5.5
Adult InseminatedFemale Spermatheca
 
 2.3
Adult Ovary
 
 1.6
Adult Testis
 
 1.2
Adult Male Accessory Gland
 
 14.4
Adult Carcass
 
 8.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 3.575
Larval Midgut
 
 3.9
Larval Hindgut
 
 3.4
Larval Malpighian Tubules
 
 2.5
Larval Fat Body
 
 3.2
Larval Salivary Gland
 
 4.6
Larval Trachea
 
 5.175
Larval Carcass
 
 10.9
Adult Head
 
 4
Adult Eye
 
 3.775
Adult Brain
 
 3.2
Adult Thoracic-Abdominal Ganglion
 
 2.6
Adult Crop
 
 4.8
Adult Midgut
 
 3.8
Adult Hindgut
 
 3.2
Adult Malpighian Tubules
 
 3
Adult Fat Body
 
 6.9
Adult Salivary Gland
 
 18
Adult Heart
 
 1.3
Adult VirginFemale Spermatheca
 
 5.5
Adult InseminatedFemale Spermatheca
 
 2.3
Adult Ovary
 
 1.6
Adult Testis
 
 1.2
Adult Male Accessory Gland
 
 14.4
Adult Carcass
 
 8.4
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 4
 
NA 
Eye
 
 3.775
 
NA 
Brain
 
 3.2
 
3.575 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 2.6
 
NA 
Crop
 
 4.8
 
3.9 
Midgut
 
 3.8
 
3.4 
Hindgut
 
 3.2
 
2.5 
Malpighian Tubules
 
 3
 
3.2 
Fat Body
 
 6.9
 
4.6 
Salivary Gland
 
 no informative data
 
NA 
Heart
 
 1.3
 
5.175 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 5.5
 
NA 
InseminatedFemale Spermatheca
 
 2.3
 
NA 
Ovary
 
 1.6
 
NA 
Testis
 
 1.2
 
NA 
Male Accessory Gland
 
 no informative data
 
no informative data 
Carcass
 
 8.4

FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 0
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 0
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 0
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 0
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 0
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 0
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
log, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 0
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 0
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 0
central nervous system, larvae L3
 
 0
central nervous system, pupae P8
 
 0
head, virgin 1-day female
 
 0
head, virgin 4-day female
 
 0
head, virgin 20-day female
 
 0
head, mated 1-day female
 
 0
head, mated 4-day female
 
 0
head, mated 20-day female
 
 0
head, mated 1-day male
 
 0
head, mated 4-day male
 
 0
head, mated 20-day male
 
 0
salivary gland, larvae L3 wandering
 
 0
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 0
digestive system, 1-day adult
 
 0
digestive system, 4-day adult
 
 0
digestive system, 20-day adult
 
 0
fat body, larvae L3 wandering
 
 0
fat body, white prepupae
 
 0
fat body, pupae P8
 
 0
carcass, larvae L3 wandering
 
 0
carcass, 1-day adult
 
 0
carcass, 4-day adult
 
 0
carcass, 20-day adult
 
 0
ovary, virgin 4-day female
 
 0
ovary, mated 4-day female
 
 0
testis, mated 4-day male
 
 0
accessory gland, mated 4-day male
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 
central nervous system, larvae L3
 
 
central nervous system, pupae P8
 
 
head, virgin 1-day female
 
 
head, virgin 4-day female
 
 
head, virgin 20-day female
 
 
head, mated 1-day female
 
 
head, mated 4-day female
 
 
head, mated 20-day female
 
 
head, mated 1-day male
 
 
head, mated 4-day male
 
 
head, mated 20-day male
 
 
salivary gland, larvae L3 wandering
 
 
salivary gland, white prepupae
 
 
digestive system, larvae L3 wandering
 
 
digestive system, 1-day adult
 
 
digestive system, 4-day adult
 
 
digestive system, 20-day adult
 
 
fat body, larvae L3 wandering
 
 
fat body, white prepupae
 
 
fat body, pupae P8
 
 
carcass, larvae L3 wandering
 
 
carcass, 1-day adult
 
 
carcass, 4-day adult
 
 
carcass, 20-day adult
 
 
ovary, virgin 4-day female
 
 
ovary, mated 4-day female
 
 
testis, mated 4-day male
 
 
accessory gland, mated 4-day male
 
 

hide modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)


   Styles
   Scales

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression. Peak expression observed within 18-24 hour embryonic stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 1
embryo 06-08hr
 
 1
embryo 08-10hr
 
 1
embryo 10-12hr
 
 4
embryo 12-14hr
 
 3
embryo 14-16hr
 
 2
embryo 16-18hr
 
 24
embryo 18-20hr
 
 63
embryo 20-22hr
 
 28
embryo 22-24hr
 
 30
larva L1
 
 4
larva L2
 
 5
larva L3 12hr old
 
 9
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 0
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 1
white prepupae 12hr
 
 1
white prepupae 24hr
 
 0
pupae 2d postWPP
 
 1
pupae 3d postWPP
 
 5
pupae 4d postWPP
 
 0
adult male 01day
 
 0
adult male 05day
 
 0
adult male 30day
 
 0
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 1
embryo 06-08hr
 
 1
embryo 08-10hr
 
 1
embryo 10-12hr
 
 4
embryo 12-14hr
 
 3
embryo 14-16hr
 
 2
embryo 16-18hr
 
 24
embryo 18-20hr
 (63)
embryo 20-22hr
 (28)
embryo 22-24hr
 (30)
larva L1
 
 4
larva L2
 
 5
larva L3 12hr old
 
 9
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 0
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 1
white prepupae 12hr
 
 1
white prepupae 24hr
 
 0
pupae 2d postWPP
 
 1
pupae 3d postWPP
 
 5
pupae 4d postWPP
 
 0
adult male 01day
 
 0
adult male 05day
 
 0
adult male 30day
 
 0
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 1
embryo 06-08hr
 
 1
embryo 08-10hr
 
 1
embryo 10-12hr
 
 4
embryo 12-14hr
 
 3
embryo 14-16hr
 
 2
embryo 16-18hr
 
 24
embryo 18-20hr
 
 63
embryo 20-22hr
 
 28
embryo 22-24hr
 
 30
larva L1
 
 4
larva L2
 
 5
larva L3 12hr old
 
 9
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 0
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 1
white prepupae 12hr
 
 1
white prepupae 24hr
 
 0
pupae 2d postWPP
 
 1
pupae 3d postWPP
 
 5
pupae 4d postWPP
 
 0
adult male 01day
 
 0
adult male 05day
 
 0
adult male 30day
 
 0
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 1
embryo 06-08hr
 
 1
embryo 08-10hr
 
 1
embryo 10-12hr
 
 4
embryo 12-14hr
 
 3
embryo 14-16hr
 
 2
embryo 16-18hr
 
 24
embryo 18-20hr
 
 63
embryo 20-22hr
 
 28
embryo 22-24hr
 
 30
larva L1
 
 4
larva L2
 
 5
larva L3 12hr old
 
 9
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 0
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 1
white prepupae 12hr
 
 1
white prepupae 24hr
 
 0
pupae 2d postWPP
 
 1
pupae 3d postWPP
 
 5
pupae 4d postWPP
 
 0
adult male 01day
 
 0
adult male 05day
 
 0
adult male 30day
 
 0
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 1
embryo 06-08hr
 
 1
embryo 08-10hr
 
 1
embryo 10-12hr
 
 4
embryo 12-14hr
 
 3
embryo 14-16hr
 
 2
embryo 16-18hr
 
 24
embryo 18-20hr
 
 63
embryo 20-22hr
 
 28
embryo 22-24hr
 
 30
larva L1
 
 4
larva L2
 
 5
larva L3 12hr old
 
 9
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 0
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 1
white prepupae 12hr
 
 1
white prepupae 24hr
 
 0
pupae 2d postWPP
 
 1
pupae 3d postWPP
 
 5
pupae 4d postWPP
 
 0
adult male 01day
 
 0
adult male 05day
 
 0
adult male 30day
 
 0
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 1
embryo 06-08hr
 
 1
embryo 08-10hr
 
 1
embryo 10-12hr
 
 4
embryo 12-14hr
 
 3
embryo 14-16hr
 
 2
embryo 16-18hr
 
 24
embryo 18-20hr
 (63)
embryo 20-22hr
 28
embryo 22-24hr
 30
larva L1
 
 4
larva L2
 
 5
larva L3 12hr old
 
 9
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 0
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 1
white prepupae 12hr
 
 1
white prepupae 24hr
 
 0
pupae 2d postWPP
 
 1
pupae 3d postWPP
 
 5
pupae 4d postWPP
 
 0
adult male 01day
 
 0
adult male 05day
 
 0
adult male 30day
 
 0
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 1
embryo 06-08hr
 
 1
embryo 08-10hr
 
 1
embryo 10-12hr
 
 4
embryo 12-14hr
 
 3
embryo 14-16hr
 
 2
embryo 16-18hr
 
 24
embryo 18-20hr
 
 63
embryo 20-22hr
 
 28
embryo 22-24hr
 
 30
larva L1
 
 4
larva L2
 
 5
larva L3 12hr old
 
 9
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 0
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 1
white prepupae 12hr
 
 1
white prepupae 24hr
 
 0
pupae 2d postWPP
 
 1
pupae 3d postWPP
 
 5
pupae 4d postWPP
 
 0
adult male 01day
 
 0
adult male 05day
 
 0
adult male 30day
 
 0
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 0
embryo 02-04hr
 
 0
embryo 04-06hr
 
 1
embryo 06-08hr
 
 1
embryo 08-10hr
 
 1
embryo 10-12hr
 
 4
embryo 12-14hr
 
 3
embryo 14-16hr
 
 2
embryo 16-18hr
 
 24
embryo 18-20hr
 
 63
embryo 20-22hr
 
 28
embryo 22-24hr
 
 30
larva L1
 
 4
larva L2
 
 5
larva L3 12hr old
 
 9
larva L3 puffstage 1-2
 
 0
larva L3 puffstage 3-6
 
 0
larva L3 puffstage 7-9
 
 0
white prepupae new
 
 1
white prepupae 12hr
 
 1
white prepupae 24hr
 
 0
pupae 2d postWPP
 
 1
pupae 3d postWPP
 
 5
pupae 4d postWPP
 
 0
adult male 01day
 
 0
adult male 05day
 
 0
adult male 30day
 
 0
adult female 01day
 
 0
adult female 05day
 
 0
adult female 30day
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

modENCODE Temporal Expression Data (Graveley et al., 2011)
hide modENCODE Cell Lines RNA-Seq
hide modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 0
cold shock, 4-day adult
 
 0
heat shock, 4-day adult
 
 0
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 1
Cadmium 50 mM 48 hrs, 4-day adult
 
 0
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 0
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 0
Zinc 4.5 mM 48 hrs, 4-day adult
 
 0
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 0
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 0
cold shock, 4-day adult
 
 0
heat shock, 4-day adult
 
 0
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 1
Cadmium 50 mM 48 hrs, 4-day adult
 
 0
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 0
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 0
Zinc 4.5 mM 48 hrs, 4-day adult
 
 0
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 0
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 0
cold shock, 4-day adult
 
 0
heat shock, 4-day adult
 
 0
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 1
Cadmium 50 mM 48 hrs, 4-day adult
 
 0
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 0
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 0
Zinc 4.5 mM 48 hrs, 4-day adult
 
 0
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 0
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 0
cold shock, 4-day adult
 
 0
heat shock, 4-day adult
 
 0
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 1
Cadmium 50 mM 48 hrs, 4-day adult
 
 0
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 0
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 0
Zinc 4.5 mM 48 hrs, 4-day adult
 
 0
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 0
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 0
cold shock, 4-day adult
 
 0
heat shock, 4-day adult
 
 0
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 1
Cadmium 50 mM 48 hrs, 4-day adult
 
 0
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 0
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 0
Zinc 4.5 mM 48 hrs, 4-day adult
 
 0
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 0
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
log, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 0
cold shock, 4-day adult
 
 0
heat shock, 4-day adult
 
 0
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 1
Cadmium 50 mM 48 hrs, 4-day adult
 
 0
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 0
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 0
Zinc 4.5 mM 48 hrs, 4-day adult
 
 0
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 0
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 0
cold shock, 4-day adult
 
 0
heat shock, 4-day adult
 
 0
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 1
Cadmium 50 mM 48 hrs, 4-day adult
 
 0
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 0
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 0
Zinc 4.5 mM 48 hrs, 4-day adult
 
 0
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 0
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 0
cold shock, 4-day adult
 
 0
heat shock, 4-day adult
 
 0
Cadmium 50 mM 6 hrs, larvae L3
 
 0
Cadmium 50 mM 12 hrs, larvae L3
 
 1
Cadmium 50 mM 48 hrs, 4-day adult
 
 0
Cadmium 100 mM 48 hrs, 4-day adult
 
 0
Copper 0.5 mM 12 hrs, larvae L3
 
 0
Copper 15 mM 48 hrs, 4-day adult
 
 0
Zinc 5 mM 12 hrs, larvae L3
 
 0
Zinc 4.5 mM 48 hrs, 4-day adult
 
 0
Ethanol 2.5% 3 hrs, larvae L3
 
 0
Ethanol 5% 3 hrs, larvae L3
 
 0
Ethanol 10% 3 hrs, larvae L3
 
 0
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 0
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 0
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 0
Paraquat 5 mM 48 hrs, 4-day adult
 
 0
Paraquat 10 mM 48 hrs, 4-day adult
 
 0
Rotenone 2 μg 12 hrs, larvae L3
 
 0
Rotenone 8 μg 12 hrs, larvae L3
 
 0
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Treatment   Expression Level
extended cold, 4-day adult
 
 
cold shock, 4-day adult
 
 
heat shock, 4-day adult
 
 
Cadmium 50 mM 6 hrs, larvae L3
 
 
Cadmium 50 mM 12 hrs, larvae L3
 
 
Cadmium 50 mM 48 hrs, 4-day adult
 
 
Cadmium 100 mM 48 hrs, 4-day adult
 
 
Copper 0.5 mM 12 hrs, larvae L3
 
 
Copper 15 mM 48 hrs, 4-day adult
 
 
Zinc 5 mM 12 hrs, larvae L3
 
 
Zinc 4.5 mM 48 hrs, 4-day adult
 
 
Ethanol 2.5% 3 hrs, larvae L3
 
 
Ethanol 5% 3 hrs, larvae L3
 
 
Ethanol 10% 3 hrs, larvae L3
 
 
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 
Paraquat 5 mM 48 hrs, 4-day adult
 
 
Paraquat 10 mM 48 hrs, 4-day adult
 
 
Rotenone 2 μg 12 hrs, larvae L3
 
 
Rotenone 8 μg 12 hrs, larvae L3
 
 

hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 0 )
For All Classical Alleles Show

Allele of Cpr78CbClassMutagenStocksKnown lesion
hide Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show

Allele of Cpr78CbClassMutagenStocksKnown lesion
Cpr78CbGD55451 Yes
Cpr78CbKK1098691 Yes
hide Aneuploid Aberrations
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
UAS construct
Insertions
Type of insertions
Name
Expression data
hide Gene Ontology: Function, Process & Cellular Component ( 1 unique term )
hide Terms Based on Experimental Evidence ( 0 terms )
hide Terms Based on Predictions or Assertions ( 1 term )
Molecular Function
CV term
References
inferred from sequence or structural similarity with InterPro:IPR000618
inferred from sequence or structural similarity with Pfam:PF00379
Biological Process ( 0 terms)
Cellular Component ( 0 terms)
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
Cpr78Cb allele
Gene
References
hide External Data
Linkouts
DroID - A comprehensive database of gene and protein interactions.
hide Orthologs
hide OrthoDB Orthologs (237) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
No orthologs identified
Insect inclusive ortholog search
Arthropod inclusive ortholog search
Metazoa inclusive ortholog search
No orthologs identified
hideOrthologs in Drosophila Species (EOG6N8RRD)
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly 
 
 
Drosophila simulans
 
Y
 
Drosophila sechellia
 
Y
 
Drosophila erecta
 
Y
 
Drosophila yakuba
 
Y
 
Drosophila yakuba
 
 
 
Drosophila ananassae
 
Y
 
Drosophila pseudoobscura pseudoobscura
 
Y
 
Drosophila persimilis
 
Y
 
Drosophila willistoni
 
Y
 
Drosophila virilis
 
Y
 
Drosophila grimshawi
 
Y
 
Orthologs in non-Drosophila Dipterans (None identified)
No non-Drosophilid orthologies identified
hideOrthologs in non-Dipteran Insects (EOG6KKX13)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Apis mellifera
Western honey bee 
Amel\GB47906
Y
Apis mellifera
Western honey bee 
Amel\LOC724649
Y
Apis mellifera
Western honey bee 
Amel\CPR12
Y
Apis mellifera
Western honey bee 
Amel\GB46298
Y
Apis mellifera
Western honey bee 
Amel\GB52161
Y
Apis mellifera
Western honey bee 
Amel\CPR13
Y
Apis mellifera
Western honey bee 
Amel\GB47903
Y
Apis mellifera
Western honey bee 
Amel\GB42612
Y
Apis mellifera
Western honey bee 
Amel\GB43670
Y
Apis mellifera
Western honey bee 
Amel\GB46297
Y
Apis mellifera
Western honey bee 
Amel\GB47902
Y
Apis mellifera
Western honey bee 
Amel\GB46312
Y
Apis mellifera
Western honey bee 
Amel\GB46299
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG006503
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG006859
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG005393
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG006863
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG013411
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG013416
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG006864
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG010389
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG010007
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG006867
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG016022
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG013414
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG013417
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG007522
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG006861
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG010008
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG006862
Y
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG013413
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH22753
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH22751
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH17027
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH17029
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH21414
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH19798
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH22756
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH17028
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH22755
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH21415
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH21416
Y
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH22752
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP25267
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP27437
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP24251
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP17449
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP27431
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP25266
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP24250
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP27444
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP27432
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP25277
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP24236
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP25265
Y
Atta cephalotes
Leafcutter ant 
Acep\ACEP27427
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO21033
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO14804
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO21024
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO21020
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO20940
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO15374
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO20939
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO21032
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO21025
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO20958
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO21019
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO21021
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO14803
Y
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO14802
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL21887
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL21889
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL20594
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL20587
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL19362
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL20586
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL19363
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL20593
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL20772
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL19364
Y
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL21888
Y
Linepithema humile
Argentine ant 
Lhum\LH23807
Y
Linepithema humile
Argentine ant 
Lhum\LH19211
Y
Linepithema humile
Argentine ant 
Lhum\LH16388
Y
Linepithema humile
Argentine ant 
Lhum\LH16391
Y
Linepithema humile
Argentine ant 
Lhum\LH19218
Y
Linepithema humile
Argentine ant 
Lhum\LH16383
Y
Linepithema humile
Argentine ant 
Lhum\LH10870
Y
Linepithema humile
Argentine ant 
Lhum\LH24581
Y
Linepithema humile
Argentine ant 
Lhum\LH24582
Y
Linepithema humile
Argentine ant 
Lhum\LH16382
Y
Linepithema humile
Argentine ant 
Lhum\LH24583
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB20785
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB14690
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB18423
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB14691
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB18425
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB14673
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB20784
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB14688
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB20800
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB24199
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB14682
Y
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB20794
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV25632
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV21745
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV21730
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV25026
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV16553
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV21768
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV25020
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV25023
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV16530
Y
Solenopsis invicta
Red fire ant 
Sinv\SINV21761
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Acyrthosiphon pisum
Pea aphid 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Bombyx mori
Silkmoth 
Y
Pediculus humanus
Human body louse 
Y
Pediculus humanus
Human body louse 
Y
Pediculus humanus
Human body louse 
Y
Pediculus humanus
Human body louse 
Y
Pediculus humanus
Human body louse 
Y
Pediculus humanus
Human body louse 
Y
Pediculus humanus
Human body louse 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
Tribolium castaneum
Red flour beetle 
Y
hideOrthologs in non-Insect Arthropods (EOG63R24R)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Daphnia pulex
Water flea 
Y
Ixodes scapularis
Deer tick 
Y
Ixodes scapularis
Deer tick 
Y
Ixodes scapularis
Deer tick 
Y
Ixodes scapularis
Deer tick 
Y
Ixodes scapularis
Deer tick 
Y
Ixodes scapularis
Deer tick 
Y
Ixodes scapularis
Deer tick 
Y
Ixodes scapularis
Deer tick 
Y
Ixodes scapularis
Deer tick 
Y
Ixodes scapularis
Deer tick 
Y
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
hide Human Orthologs (0)
Gene
OMIM
HGNC
hideAAA Orthologs (10) based on analysis using Dmel annotation version 4.3
Organism
Gene
Drosophila simulans
Drosophila sechellia
Drosophila erecta
Drosophila yakuba
Drosophila ananassae
Drosophila pseudoobscura pseudoobscura
Drosophila persimilis
Drosophila willistoni
Drosophila virilis
Drosophila grimshawi
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 2 )
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 61 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
hide Antibody Information
hide Other Information
hide Discoverer
hide Etymology
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for identity of: Cpr78Cb CG7663
Source for database merge of
Source for merge of: CG7663 anon-EST:ParkEST240
Source for merge of: CG7663 BcDNA:RE38359
Additional comments
Source for merge of CG7663 BcDNA:RE38359 was a shared cDNA (date:030728).
hide Other Comments
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
Linkouts
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
modMine - Data generated by the modENCODE project.
hide Synonyms & Secondary IDs ( 6 )
Reported As
Symbol Synonym
anon-EST:ParkEST240
 
BcDNA:RE38359
 
Name Synonym
CG7663
 
Cuticular protein 78Cb
 
Secondary FlyBase IDs
  • FBgn0026288
  • FBgn0061402
hide References ( 21 )
Generate a list of
List References by type
hide Recent research papers ( 1 )
Rotstein et al., 2011, PLoS ONE 6(12): e28985
Tramtrack is genetically upstream of genes controlling tracheal tube size in Drosophila. [FBrf0217085]
hide Recent reviews (0)
All reviews listed in FlyBase were published before 2011