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Gene Dmel\CG7611

General Information
Symbol	Dmel\CG7611	Species	D. melanogaster
Name		Annotation symbol	CG7611
Feature type	protein_coding_gene	FlyBase ID	FBgn0037094
Gene Model Status	Current	Stock availability	4 publicly available
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	78D5-78D5	Sequence location	3L:21,516,286..21,521,263 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG7611 (FBgn0037094). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 6 alleles are reported. The phenotypes of these alleles are annotated with: trichogen cell; mesothoracic tergum. It has 9 annotated transcripts and 9 annotated polypeptides. Protein features are: CTLH, C-terminal LisH motif; G-protein beta WD-40 repeat; LisH dimerisation motif; WD40 repeat; WD40 repeat, conserved site; WD40-repeat-containing domain; WD40/YVTN repeat-like-containing domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-18 hour embryonic stages, during late larval stages, at stages throughout the pupal period. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, adult female reproductive system, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, larval trachea, adult male reproductive system. Comments on Affy2 ProbeSet: ProbeSet 1623225_s_at completely aligns to an exonic region common to each of the 9 FlyBase-annotated transcript isoforms of CG7611. Gene sequence location is 3L:21516286..21521263.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 78D5-78D5   Limits computationally determined from genome sequence between P{lacW}l(3)j1B10j1B10 and P{lacW}l(3)j2C4j2C4
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG7611 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.45 Low-frequency RNA-seq exon junction(s) not annotated. Annotated transcripts do not represent all supported alternative splices within 5' UTR.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG7611-RA FBtr0078366  NM_141069   3810   630 CG7611-RB FBtr0078362  NM_168913   3348   630 CG7611-RC FBtr0078364  NM_168914   3070   630 CG7611-RD FBtr0078365  NM_168915   3143   630 CG7611-RE FBtr0078359  NM_168916   2972   630 CG7611-RG FBtr0078361  NM_168918   3370   630 CG7611-RH FBtr0078363  NM_168919   3041   630 CG7611-RI FBtr0301197  NM_001170018   4464   630 CG7611-RJ FBtr0301198  NM_168917   3001   630
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG7611-PA   FBpp0078022   69.6   630   5.34     NP_649326   AAF51739 CG7611-PB   FBpp0078018   69.6   630   5.34     NP_730644   AAG22180 CG7611-PC   FBpp0078020   69.6   630   5.34     NP_730645   AAG22182 CG7611-PD   FBpp0078021   69.6   630   5.34     NP_730646   AAG22181 CG7611-PE   FBpp0078015   69.6   630   5.34     NP_730647   AAN12172 CG7611-PG   FBpp0078017   69.6   630   5.34     NP_730649   AAN12174 CG7611-PH   FBpp0078019   69.6   630   5.34     NP_730650   AAN12175 CG7611-PI   FBpp0290415   69.6   630   5.34     NP_001163489   ACZ94760 CG7611-PJ   FBpp0290416   69.6   630   5.34     NP_730648   AAN12173
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • WD40 repeat (IPR001680) LisH dimerisation motif (IPR006594) CTLH, C-terminal LisH motif (IPR006595) WD40 repeat, conserved site (IPR019775) G-protein beta WD-40 repeat (IPR020472) WD40-repeat-containing domain (IPR017986) WD40/YVTN repeat-like-containing domain (IPR015943)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA141795   AA141796   AA202125   AA246337   AA392976   AA536566   AA540505   AA540538   AA697651   AA940923   AA978439   AA990672   AE014296 AAF51739   AE014296 AAG22180   AE014296 AAG22181   AE014296 AAG22182   AE014296 AAN12172   AE014296 AAN12173   AE014296 AAN12174   AE014296 AAN12175   AE014296 ACZ94760   AI108607   AI134484   AI258410   AI258421   AI295246   AI387826   AI389666   AI405045   AI405858   AI512188   AI512964   AI517604   AI518314   AI518766   AI518800   AI519294   AI519739   AI519965   AI531629   AI534936   AI541602   AY069717 AAL39862   BG636855   BG638927   BI166583   BI168631   BI170062   BI215736   BI227816   BI228761   BI232836   BI234021   BI235114   BI235137   BI239097   BI240337   BI243536   BI355231   BI364276   BI365222   BI365858   BI367365   BI370500   BI370648   BI372913   BI375250   BI375525   BI482610   BI483004   BI483103   BI485060   BI487236   BI577253   BI580113   BI632213   BI632313   BI635487   BI636601   BI638930   BI641537   BI641909   CA804171   CA806497   CK660475   CL528048   CO156764   CO179431   CO270326   CO273123   CO278622   CO280228   CO282967   CO283829   CO287190   CO288766   CO294118   CO294615   CO297300   CO297524   CO305884   CO306752   CO314602   CO315778   CO325045   CO327910   CO329920   CO336637   CO336756   CZ469492   EC058243   EC064407   EC071286   EC075281   EC077366   EC080293   EC081592   EC195919   EC199644   EC201352   EC202921   EC203927   EC204886   EC212242   EC222218   EC226350   EC230641   EC232429   EC233220   EC234090   EC237437   EC237858   EC245758   EC247781   EC259909   EC262178   EC264226   EC267781   EV598383   EV598861   GH749057   GH749480   GH749564   GH749652   GH750378   GH750952   GH750994   GH751001   GH751033   GH751356   GH751359   GH751708   GH751749   GH751955   GH752026   GH752219   GH752847   GH753440   GH753514   GH753854   GH754283   GH754490   GH755174   GH755782   GH755787   GH756175   GH756412   GH756452   GH756468   GH757237   GH757261   GH757310   GH757676   GH757794   GH758345   GH758655   GH758972   GH758980   GH759470   GH759857   GH770591   GH770748   GH771525   GH771588   GH772191   GH773133   GH773596   GH773716   GH773831   GH774461   GH774841   GH775070   GH775083   GH776709   GH777057   GH777368   GH778100   GH778456   GH778593   GH778606   GH778770   GH779896   GH780024   GH780087   GH781025   GH781940   GH782085   GH782208   GH782635   GH783135   GH783591   GH783785   GH783810   GH785300   GH785331   GH785450   GH785716   GH786073   GH786081   GH786933   GH786971   GH787471   GH787545   GH787601   GH787784   GH788016   GH788410   GH788775   GH789424   GH789640   GH789940   GH790710   GH790713   GH790738   GH790842   GH790886   GH790974   GH791158   GH791599   GH792084   GH792276   GH792548   GH792846   GH793155   GH793938   GH795269   GH795749   GH795753   GH796139   GH797139   GH797356   GH797651   GH797684   GH798837   GH799143   GH799945   GH800085   GH800193   GH800304   GH800441   GH800490   GH800559   GH801389   GH801422   GH801472   GH801656   GH801918   GH801977   GH803444   GH803635   GH803770   GH804289   GH804350   GH804861   GH805103   GH805505   GH805741   GH806022   GH806151   GH806845   GH807092   GH807341   GH807746   GH808102   GH808225   GH808910   GH809135   GH809295   GH809637   GH810311   GH810697   GH810909   GH811484   GH811511   GH811993   GH814767   GH815527   GH815746   GH816097   GH816381   GH816779   GH817294   GH817314   GH817362   GH817611   GH817853   GH817909   GH817930   GH818061   GH818880   GH819143   GH819576   GH820313   GH820427   GH820707   GH822273   GH822666   GH822925   GH823525   GH823746   GH824557   GH825300   GH825649   GH825841   GH826044   GH826620   GH826890   GH826952   GH827065   GH827122   GH827498   GH827542   GH827756   GH827949   GH827955   GH828136   GH828271   GH829399   GH830064   GH830875   GH830970   GH831188   GH831731   GH831805   GH831851   GH832177   GH832695   GH833283   GH833354   GH833415   GH834353   GH834444   GH835406   GH835413   GH835916   GH835927   GH836097   GH836164   GH836587   GH837194   GH837643   GH838045   GH838321   GH838364   GH838442   GH838581   GH838799   GH838859   GH839087   GH839118   GH839242   GH839334   GH839538   GH839889   GH839937   GH840229   GH841330   GH841574   GH841652   GH841948   GH842346   GH843680   GH843991   GH844333   GH844386   GH846314   GH847746   GH847820   GH848046   GH848061   GH848860   GH848940   GH849301   GH849456   GH850995   GH851357   GH852402   GH852771   GH853091   GH853605   GH854319   GH854559   GH854817   GH855025   GH855196   GH855322   GH855414   GH856198   GH856480   GH858659   GH858919   GH859256   GH859277   GH859337   GH859542   GH859653   GH859692   GH859974   GH860168   GH861971   GH862123   GH863181   GH863257   GH863357   GH863380   GH863837   GH863942   GH864288   GH864431   GH864441   GH864543   GH864814   GH865004   GH865198   GH865595   GH865619   GH865882   GH866021   GH866059   GH866127   GH866850   GH867059   GH867064   GH867074   GH867229   GH867644   GH867745   GH868062   GH868760   GH869913   GH870029   GH871287   GH871979   GH873051   GH873173   GH873465   GH873515   GH874153   GH874186   GH874889   GH875168   GH875354   GH876940   GH877524   GH877838   GH878193   GH878198   GH879014   GH879120   GH879474   GH879692   GH879781   GH879919   GH880912   GH881061   GH881393   GH882020   GH882406   GH882713   GH882871   GH883605   GH885148   GH885471   GH885613   GH886000   GH886028   GH886248   GH886690   GH887724   GH887881   GH887886   GH888037   GH888322   GH888398   GH888733   GH889149   GH889807   GH889889   GH890327   GH891404   GH891528   GH892180   GH892479   GH893063   GH893295   GH893845   GH893949   GH894129   GH894285   GH894311   GH894452   GH894639   GH895792   GH895923   GH896027   GH896176   GH896765   GH897961   GH897971   GH898217   GH898564   GH898782   GH898798   GH899064   GH899857   GH900379   GH900692   GH900895   GH901112   GH901821   GH902060   GH902172   GH902645   GH903146   GH903287   GH903722   GH903750   GH904313   GH905103   GH905390   GH906479   GH906767   GH907186   GH908481   GH908967   GH909008   GH909474   GH910742   GH910824   GH910845   GH911297   GH911573   GH911673   GH911741   GH911836   GH911942   GH913049   GH913690   GH914448   GH914634   GH914793   GH914871   GH915014   GH915246   GH915393   GH915712   GH916577   GH916842   GH916965   GH917187   GH917272   GH917746   GH917809   GH917847   GH918508   GH918805   GH918919   GH919983   GH919986   GH920175   GH920324   GH920511   GH920761   GH920830   GH920839   GH921317   GH921766   GH922306   GH922580   GH922719   GH924557   GH924676   GH924793   GH924827   GH924835   GH924958   GH925271   GH925692   GH925974   GH926529   GH926687   GH926731   GH926766   GH926927   GH926939   GH927021   GH927078   GH927373   GH927782   GH928583   GH929344   GH929401   GH929740   GH930376   GH930486   GH930678   GH931759   GH932067   GH932329   GH933161   GH933269   GH933447   GH933767   GH934535   GH934616   GH934790   GH934856   GH934888   GH935053   GH935519   GH935899   GH936068   GH936824   GH937241   GH937326   GH937752   GH938310   GH938701   GH938726   GH938877   GH939030   GH939452   GH939625   GH940095   GH940308   GH940512   GH940933   GH940969   GH940985   GH941012   GH941049   GH941862   GH942465   GH945874   GH946550   GH947789   GH949758   GH952058   GH953719   GH955587   GH964993   GH965155   GH974806   GH979288   GH979454   GH979631   GH980979   GH981874   GH983286
UniProtKB/Swiss-Prot	Q7K0L4
UniProtKB/TrEMBL	E1JHX5
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 4 -- 6   organism   (Fisher et al., 2012) embryonic stage 7 -- 8   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 9 -- 10   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 11 -- 12   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 13 -- 16   organism | ubiquitous   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, adult female reproductive system, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, larval trachea, adult male reproductive system. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    525.125 Larval Midgut    1270.9 Larval Hindgut    725.1 Larval Malpighian Tubules    1195.9 Larval Fat Body    988.1 Larval Salivary Gland    606.2 Larval Trachea    452.7 Larval Carcass    688 Adult Head    374.7 Adult Eye    299.675 Adult Brain    373 Adult Thoracic-Abdominal Ganglion    381.4 Adult Crop    579.4 Adult Midgut    1094.6 Adult Hindgut    631.1 Adult Malpighian Tubules    606.3 Adult Fat Body    818.1 Adult Salivary Gland    653.1 Adult Heart    560.05 Adult VirginFemale Spermatheca    1024.3 Adult InseminatedFemale Spermatheca    878.1 Adult Ovary    546.1 Adult Testis    114.1 Adult Male Accessory Gland    457.8 Adult Carcass    605 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  525.125 Larval Midgut  (1270.9) Larval Hindgut  (725.1) Larval Malpighian Tubules  (1195.9) Larval Fat Body  (988.1) Larval Salivary Gland  (606.2) Larval Trachea    452.7 Larval Carcass  (688) Adult Head    374.7 Adult Eye    299.675 Adult Brain    373 Adult Thoracic-Abdominal Ganglion    381.4 Adult Crop  (579.4) Adult Midgut  (1094.6) Adult Hindgut  (631.1) Adult Malpighian Tubules  (606.3) Adult Fat Body  (818.1) Adult Salivary Gland  (653.1) Adult Heart  (560.05) Adult VirginFemale Spermatheca  (1024.3) Adult InseminatedFemale Spermatheca  (878.1) Adult Ovary  (546.1) Adult Testis    114.1 Adult Male Accessory Gland    457.8 Adult Carcass  (605) Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    525.125 Larval Midgut  (1270.9) Larval Hindgut    725.1 Larval Malpighian Tubules  (1195.9) Larval Fat Body    988.1 Larval Salivary Gland    606.2 Larval Trachea    452.7 Larval Carcass    688 Adult Head    374.7 Adult Eye    299.675 Adult Brain    373 Adult Thoracic-Abdominal Ganglion    381.4 Adult Crop    579.4 Adult Midgut  (1094.6) Adult Hindgut    631.1 Adult Malpighian Tubules    606.3 Adult Fat Body    818.1 Adult Salivary Gland    653.1 Adult Heart    560.05 Adult VirginFemale Spermatheca  1024.3 Adult InseminatedFemale Spermatheca    878.1 Adult Ovary    546.1 Adult Testis    114.1 Adult Male Accessory Gland    457.8 Adult Carcass    605 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    525.125 Larval Midgut    1270.9 Larval Hindgut    725.1 Larval Malpighian Tubules    1195.9 Larval Fat Body    988.1 Larval Salivary Gland    606.2 Larval Trachea    452.7 Larval Carcass    688 Adult Head    374.7 Adult Eye    299.675 Adult Brain    373 Adult Thoracic-Abdominal Ganglion    381.4 Adult Crop    579.4 Adult Midgut    1094.6 Adult Hindgut    631.1 Adult Malpighian Tubules    606.3 Adult Fat Body    818.1 Adult Salivary Gland    653.1 Adult Heart    560.05 Adult VirginFemale Spermatheca    1024.3 Adult InseminatedFemale Spermatheca    878.1 Adult Ovary    546.1 Adult Testis    114.1 Adult Male Accessory Gland    457.8 Adult Carcass    605 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    525.125 Larval Midgut    1270.9 Larval Hindgut    725.1 Larval Malpighian Tubules    1195.9 Larval Fat Body    988.1 Larval Salivary Gland    606.2 Larval Trachea    452.7 Larval Carcass    688 Adult Head    374.7 Adult Eye    299.675 Adult Brain    373 Adult Thoracic-Abdominal Ganglion    381.4 Adult Crop    579.4 Adult Midgut    1094.6 Adult Hindgut    631.1 Adult Malpighian Tubules    606.3 Adult Fat Body    818.1 Adult Salivary Gland    653.1 Adult Heart    560.05 Adult VirginFemale Spermatheca    1024.3 Adult InseminatedFemale Spermatheca    878.1 Adult Ovary    546.1 Adult Testis    114.1 Adult Male Accessory Gland    457.8 Adult Carcass    605 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  525.125 Larval Midgut  (1270.9) Larval Hindgut  725.1 Larval Malpighian Tubules  (1195.9) Larval Fat Body  (988.1) Larval Salivary Gland  606.2 Larval Trachea    452.7 Larval Carcass  688 Adult Head    374.7 Adult Eye    299.675 Adult Brain    373 Adult Thoracic-Abdominal Ganglion    381.4 Adult Crop  579.4 Adult Midgut  (1094.6) Adult Hindgut  631.1 Adult Malpighian Tubules  606.3 Adult Fat Body  (818.1) Adult Salivary Gland  653.1 Adult Heart  560.05 Adult VirginFemale Spermatheca  (1024.3) Adult InseminatedFemale Spermatheca  (878.1) Adult Ovary  546.1 Adult Testis    114.1 Adult Male Accessory Gland    457.8 Adult Carcass  605 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    525.125 Larval Midgut  1270.9 Larval Hindgut    725.1 Larval Malpighian Tubules  1195.9 Larval Fat Body    988.1 Larval Salivary Gland    606.2 Larval Trachea    452.7 Larval Carcass    688 Adult Head    374.7 Adult Eye    299.675 Adult Brain    373 Adult Thoracic-Abdominal Ganglion    381.4 Adult Crop    579.4 Adult Midgut  1094.6 Adult Hindgut    631.1 Adult Malpighian Tubules    606.3 Adult Fat Body    818.1 Adult Salivary Gland    653.1 Adult Heart    560.05 Adult VirginFemale Spermatheca  1024.3 Adult InseminatedFemale Spermatheca    878.1 Adult Ovary    546.1 Adult Testis    114.1 Adult Male Accessory Gland    457.8 Adult Carcass    605 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    525.125 Larval Midgut    1270.9 Larval Hindgut    725.1 Larval Malpighian Tubules    1195.9 Larval Fat Body    988.1 Larval Salivary Gland    606.2 Larval Trachea    452.7 Larval Carcass    688 Adult Head    374.7 Adult Eye    299.675 Adult Brain    373 Adult Thoracic-Abdominal Ganglion    381.4 Adult Crop    579.4 Adult Midgut    1094.6 Adult Hindgut    631.1 Adult Malpighian Tubules    606.3 Adult Fat Body    818.1 Adult Salivary Gland    653.1 Adult Heart    560.05 Adult VirginFemale Spermatheca    1024.3 Adult InseminatedFemale Spermatheca    878.1 Adult Ovary    546.1 Adult Testis    114.1 Adult Male Accessory Gland    457.8 Adult Carcass    605 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    374.7   NA  Eye    299.675   NA  Brain    373   525.125  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    381.4   NA  Crop    579.4   1270.9  Midgut    1094.6   725.1  Hindgut    631.1   1195.9  Malpighian Tubules    606.3   988.1  Fat Body    818.1   606.2  Salivary Gland    653.1   NA  Heart    560.05   452.7  Trachea    NA   NA  VirginFemale Spermatheca    1024.3   NA  InseminatedFemale Spermatheca    878.1   NA  Ovary    546.1   NA  Testis    114.1   NA  Male Accessory Gland    457.8   688  Carcass    605 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    26 central nervous system, larvae L3    28 central nervous system, pupae P8    21 head, virgin 1-day female    19 head, virgin 4-day female    17 head, virgin 20-day female    23 head, mated 1-day female    16 head, mated 4-day female    14 head, mated 20-day female    20 head, mated 1-day male    24 head, mated 4-day male    15 head, mated 20-day male    19 salivary gland, larvae L3 wandering    9 salivary gland, white prepupae    102 digestive system, larvae L3 wandering    77 digestive system, 1-day adult    24 digestive system, 4-day adult    22 digestive system, 20-day adult    31 fat body, larvae L3 wandering    13 fat body, white prepupae    44 fat body, pupae P8    29 carcass, larvae L3 wandering    34 carcass, 1-day adult    20 carcass, 4-day adult    13 carcass, 20-day adult    17 ovary, virgin 4-day female    29 ovary, mated 4-day female    25 testis, mated 4-day male    5 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  26 central nervous system, larvae L3  (28) central nervous system, pupae P8    21 head, virgin 1-day female    19 head, virgin 4-day female    17 head, virgin 20-day female    23 head, mated 1-day female    16 head, mated 4-day female    14 head, mated 20-day female    20 head, mated 1-day male    24 head, mated 4-day male    15 head, mated 20-day male    19 salivary gland, larvae L3 wandering    9 salivary gland, white prepupae  (102) digestive system, larvae L3 wandering  (77) digestive system, 1-day adult    24 digestive system, 4-day adult    22 digestive system, 20-day adult  (31) fat body, larvae L3 wandering    13 fat body, white prepupae  (44) fat body, pupae P8  (29) carcass, larvae L3 wandering  (34) carcass, 1-day adult    20 carcass, 4-day adult    13 carcass, 20-day adult    17 ovary, virgin 4-day female  (29) ovary, mated 4-day female    25 testis, mated 4-day male    5 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    26 central nervous system, larvae L3    28 central nervous system, pupae P8    21 head, virgin 1-day female    19 head, virgin 4-day female    17 head, virgin 20-day female    23 head, mated 1-day female    16 head, mated 4-day female    14 head, mated 20-day female    20 head, mated 1-day male    24 head, mated 4-day male    15 head, mated 20-day male    19 salivary gland, larvae L3 wandering    9 salivary gland, white prepupae  102 digestive system, larvae L3 wandering    77 digestive system, 1-day adult    24 digestive system, 4-day adult    22 digestive system, 20-day adult    31 fat body, larvae L3 wandering    13 fat body, white prepupae    44 fat body, pupae P8    29 carcass, larvae L3 wandering    34 carcass, 1-day adult    20 carcass, 4-day adult    13 carcass, 20-day adult    17 ovary, virgin 4-day female    29 ovary, mated 4-day female    25 testis, mated 4-day male    5 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    26 central nervous system, larvae L3    28 central nervous system, pupae P8    21 head, virgin 1-day female    19 head, virgin 4-day female    17 head, virgin 20-day female    23 head, mated 1-day female    16 head, mated 4-day female    14 head, mated 20-day female    20 head, mated 1-day male    24 head, mated 4-day male    15 head, mated 20-day male    19 salivary gland, larvae L3 wandering    9 salivary gland, white prepupae    102 digestive system, larvae L3 wandering    77 digestive system, 1-day adult    24 digestive system, 4-day adult    22 digestive system, 20-day adult    31 fat body, larvae L3 wandering    13 fat body, white prepupae    44 fat body, pupae P8    29 carcass, larvae L3 wandering    34 carcass, 1-day adult    20 carcass, 4-day adult    13 carcass, 20-day adult    17 ovary, virgin 4-day female    29 ovary, mated 4-day female    25 testis, mated 4-day male    5 accessory gland, mated 4-day male    7 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    26 central nervous system, larvae L3    28 central nervous system, pupae P8    21 head, virgin 1-day female    19 head, virgin 4-day female    17 head, virgin 20-day female    23 head, mated 1-day female    16 head, mated 4-day female    14 head, mated 20-day female    20 head, mated 1-day male    24 head, mated 4-day male    15 head, mated 20-day male    19 salivary gland, larvae L3 wandering    9 salivary gland, white prepupae    102 digestive system, larvae L3 wandering    77 digestive system, 1-day adult    24 digestive system, 4-day adult    22 digestive system, 20-day adult    31 fat body, larvae L3 wandering    13 fat body, white prepupae    44 fat body, pupae P8    29 carcass, larvae L3 wandering    34 carcass, 1-day adult    20 carcass, 4-day adult    13 carcass, 20-day adult    17 ovary, virgin 4-day female    29 ovary, mated 4-day female    25 testis, mated 4-day male    5 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  26 central nervous system, larvae L3  28 central nervous system, pupae P8    21 head, virgin 1-day female    19 head, virgin 4-day female    17 head, virgin 20-day female    23 head, mated 1-day female    16 head, mated 4-day female    14 head, mated 20-day female    20 head, mated 1-day male    24 head, mated 4-day male    15 head, mated 20-day male    19 salivary gland, larvae L3 wandering    9 salivary gland, white prepupae  (102) digestive system, larvae L3 wandering  (77) digestive system, 1-day adult    24 digestive system, 4-day adult    22 digestive system, 20-day adult  31 fat body, larvae L3 wandering    13 fat body, white prepupae  (44) fat body, pupae P8  29 carcass, larvae L3 wandering  (34) carcass, 1-day adult    20 carcass, 4-day adult    13 carcass, 20-day adult    17 ovary, virgin 4-day female  29 ovary, mated 4-day female    25 testis, mated 4-day male    5 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    26 central nervous system, larvae L3    28 central nervous system, pupae P8    21 head, virgin 1-day female    19 head, virgin 4-day female    17 head, virgin 20-day female    23 head, mated 1-day female    16 head, mated 4-day female    14 head, mated 20-day female    20 head, mated 1-day male    24 head, mated 4-day male    15 head, mated 20-day male    19 salivary gland, larvae L3 wandering    9 salivary gland, white prepupae  102 digestive system, larvae L3 wandering    77 digestive system, 1-day adult    24 digestive system, 4-day adult    22 digestive system, 20-day adult    31 fat body, larvae L3 wandering    13 fat body, white prepupae    44 fat body, pupae P8    29 carcass, larvae L3 wandering    34 carcass, 1-day adult    20 carcass, 4-day adult    13 carcass, 20-day adult    17 ovary, virgin 4-day female    29 ovary, mated 4-day female    25 testis, mated 4-day male    5 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    26 central nervous system, larvae L3    28 central nervous system, pupae P8    21 head, virgin 1-day female    19 head, virgin 4-day female    17 head, virgin 20-day female    23 head, mated 1-day female    16 head, mated 4-day female    14 head, mated 20-day female    20 head, mated 1-day male    24 head, mated 4-day male    15 head, mated 20-day male    19 salivary gland, larvae L3 wandering    9 salivary gland, white prepupae    102 digestive system, larvae L3 wandering    77 digestive system, 1-day adult    24 digestive system, 4-day adult    22 digestive system, 20-day adult    31 fat body, larvae L3 wandering    13 fat body, white prepupae    44 fat body, pupae P8    29 carcass, larvae L3 wandering    34 carcass, 1-day adult    20 carcass, 4-day adult    13 carcass, 20-day adult    17 ovary, virgin 4-day female    29 ovary, mated 4-day female    25 testis, mated 4-day male    5 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-18 hour embryonic stages, during late larval stages, at stages throughout the pupal period. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    55 embryo 02-04hr    95 embryo 04-06hr    110 embryo 06-08hr    104 embryo 08-10hr    89 embryo 10-12hr    79 embryo 12-14hr    77 embryo 14-16hr    107 embryo 16-18hr    68 embryo 18-20hr    48 embryo 20-22hr    40 embryo 22-24hr    36 larva L1    13 larva L2    14 larva L3 12hr old    14 larva L3 puffstage 1-2    29 larva L3 puffstage 3-6    60 larva L3 puffstage 7-9    89 white prepupae new    111 white prepupae 12hr    110 white prepupae 24hr    69 pupae 2d postWPP    72 pupae 3d postWPP    32 pupae 4d postWPP    41 adult male 01day    38 adult male 05day    29 adult male 30day    26 adult female 01day    51 adult female 05day    39 adult female 30day    42 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (55) embryo 02-04hr  (95) embryo 04-06hr  (110) embryo 06-08hr  (104) embryo 08-10hr  (89) embryo 10-12hr  (79) embryo 12-14hr  (77) embryo 14-16hr  (107) embryo 16-18hr  (68) embryo 18-20hr  (48) embryo 20-22hr  (40) embryo 22-24hr  (36) larva L1    13 larva L2    14 larva L3 12hr old    14 larva L3 puffstage 1-2  (29) larva L3 puffstage 3-6  (60) larva L3 puffstage 7-9  (89) white prepupae new  (111) white prepupae 12hr  (110) white prepupae 24hr  (69) pupae 2d postWPP  (72) pupae 3d postWPP  (32) pupae 4d postWPP  (41) adult male 01day  (38) adult male 05day  (29) adult male 30day  26 adult female 01day  (51) adult female 05day  (39) adult female 30day  (42) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    55 embryo 02-04hr    95 embryo 04-06hr  (110) embryo 06-08hr  104 embryo 08-10hr    89 embryo 10-12hr    79 embryo 12-14hr    77 embryo 14-16hr  107 embryo 16-18hr    68 embryo 18-20hr    48 embryo 20-22hr    40 embryo 22-24hr    36 larva L1    13 larva L2    14 larva L3 12hr old    14 larva L3 puffstage 1-2    29 larva L3 puffstage 3-6    60 larva L3 puffstage 7-9    89 white prepupae new  (111) white prepupae 12hr  (110) white prepupae 24hr    69 pupae 2d postWPP    72 pupae 3d postWPP    32 pupae 4d postWPP    41 adult male 01day    38 adult male 05day    29 adult male 30day    26 adult female 01day    51 adult female 05day    39 adult female 30day    42 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    55 embryo 02-04hr    95 embryo 04-06hr    110 embryo 06-08hr    104 embryo 08-10hr    89 embryo 10-12hr    79 embryo 12-14hr    77 embryo 14-16hr    107 embryo 16-18hr    68 embryo 18-20hr    48 embryo 20-22hr    40 embryo 22-24hr    36 larva L1    13 larva L2    14 larva L3 12hr old    14 larva L3 puffstage 1-2    29 larva L3 puffstage 3-6    60 larva L3 puffstage 7-9    89 white prepupae new    111 white prepupae 12hr    110 white prepupae 24hr    69 pupae 2d postWPP    72 pupae 3d postWPP    32 pupae 4d postWPP    41 adult male 01day    38 adult male 05day    29 adult male 30day    26 adult female 01day    51 adult female 05day    39 adult female 30day    42 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    55 embryo 02-04hr    95 embryo 04-06hr    110 embryo 06-08hr    104 embryo 08-10hr    89 embryo 10-12hr    79 embryo 12-14hr    77 embryo 14-16hr    107 embryo 16-18hr    68 embryo 18-20hr    48 embryo 20-22hr    40 embryo 22-24hr    36 larva L1    13 larva L2    14 larva L3 12hr old    14 larva L3 puffstage 1-2    29 larva L3 puffstage 3-6    60 larva L3 puffstage 7-9    89 white prepupae new    111 white prepupae 12hr    110 white prepupae 24hr    69 pupae 2d postWPP    72 pupae 3d postWPP    32 pupae 4d postWPP    41 adult male 01day    38 adult male 05day    29 adult male 30day    26 adult female 01day    51 adult female 05day    39 adult female 30day    42 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (55) embryo 02-04hr  (95) embryo 04-06hr  (110) embryo 06-08hr  (104) embryo 08-10hr  (89) embryo 10-12hr  (79) embryo 12-14hr  (77) embryo 14-16hr  (107) embryo 16-18hr  (68) embryo 18-20hr  (48) embryo 20-22hr  (40) embryo 22-24hr  (36) larva L1    13 larva L2    14 larva L3 12hr old    14 larva L3 puffstage 1-2  29 larva L3 puffstage 3-6  (60) larva L3 puffstage 7-9  (89) white prepupae new  (111) white prepupae 12hr  (110) white prepupae 24hr  (69) pupae 2d postWPP  (72) pupae 3d postWPP  32 pupae 4d postWPP  (41) adult male 01day  (38) adult male 05day  29 adult male 30day  26 adult female 01day  (51) adult female 05day  (39) adult female 30day  (42) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    55 embryo 02-04hr    95 embryo 04-06hr  110 embryo 06-08hr  104 embryo 08-10hr    89 embryo 10-12hr    79 embryo 12-14hr    77 embryo 14-16hr  107 embryo 16-18hr    68 embryo 18-20hr    48 embryo 20-22hr    40 embryo 22-24hr    36 larva L1    13 larva L2    14 larva L3 12hr old    14 larva L3 puffstage 1-2    29 larva L3 puffstage 3-6    60 larva L3 puffstage 7-9    89 white prepupae new  111 white prepupae 12hr  110 white prepupae 24hr    69 pupae 2d postWPP    72 pupae 3d postWPP    32 pupae 4d postWPP    41 adult male 01day    38 adult male 05day    29 adult male 30day    26 adult female 01day    51 adult female 05day    39 adult female 30day    42 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    55 embryo 02-04hr    95 embryo 04-06hr    110 embryo 06-08hr    104 embryo 08-10hr    89 embryo 10-12hr    79 embryo 12-14hr    77 embryo 14-16hr    107 embryo 16-18hr    68 embryo 18-20hr    48 embryo 20-22hr    40 embryo 22-24hr    36 larva L1    13 larva L2    14 larva L3 12hr old    14 larva L3 puffstage 1-2    29 larva L3 puffstage 3-6    60 larva L3 puffstage 7-9    89 white prepupae new    111 white prepupae 12hr    110 white prepupae 24hr    69 pupae 2d postWPP    72 pupae 3d postWPP    32 pupae 4d postWPP    41 adult male 01day    38 adult male 05day    29 adult male 30day    26 adult female 01day    51 adult female 05day    39 adult female 30day    42 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    32 Schneider line 2 Sg4    13 embryonic 1182-4H    26 embryonic GM2    32 embryonic Kc167    14 embryonic S1    36 embryonic S3    11 leg disc CME L1    15 wing disc CME-W2    16 wing disc ML-DmD8    10 wing disc ML-DmD9    30 wing disc ML-DmD16-c3    15 wing disc ML-DmD21    15 wing disc ML-DmD32    13 haltere disc ML-DmD17-c3    28 eye-antennal disc ML-DmD11    19 antennal disc ML-DmD20-c5    10 mixed discs ML-DmD4-c1    16 CNS ML-DmBG1-c1    22 CNS ML-DmBG2-c2    24 tumorous blood cells mbn2    23 ovary fGS/OSS    42 ovary OSC    19 ovary OSS    11 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (32) Schneider line 2 Sg4    13 embryonic 1182-4H  26 embryonic GM2  (32) embryonic Kc167    14 embryonic S1  (36) embryonic S3    11 leg disc CME L1    15 wing disc CME-W2    16 wing disc ML-DmD8    10 wing disc ML-DmD9  (30) wing disc ML-DmD16-c3    15 wing disc ML-DmD21    15 wing disc ML-DmD32    13 haltere disc ML-DmD17-c3  (28) eye-antennal disc ML-DmD11    19 antennal disc ML-DmD20-c5    10 mixed discs ML-DmD4-c1    16 CNS ML-DmBG1-c1    22 CNS ML-DmBG2-c2    24 tumorous blood cells mbn2    23 ovary fGS/OSS  (42) ovary OSC    19 ovary OSS    11 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    32 Schneider line 2 Sg4    13 embryonic 1182-4H    26 embryonic GM2    32 embryonic Kc167    14 embryonic S1    36 embryonic S3    11 leg disc CME L1    15 wing disc CME-W2    16 wing disc ML-DmD8    10 wing disc ML-DmD9    30 wing disc ML-DmD16-c3    15 wing disc ML-DmD21    15 wing disc ML-DmD32    13 haltere disc ML-DmD17-c3    28 eye-antennal disc ML-DmD11    19 antennal disc ML-DmD20-c5    10 mixed discs ML-DmD4-c1    16 CNS ML-DmBG1-c1    22 CNS ML-DmBG2-c2    24 tumorous blood cells mbn2    23 ovary fGS/OSS    42 ovary OSC    19 ovary OSS    11 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    32 Schneider line 2 Sg4    13 embryonic 1182-4H    26 embryonic GM2    32 embryonic Kc167    14 embryonic S1    36 embryonic S3    11 leg disc CME L1    15 wing disc CME-W2    16 wing disc ML-DmD8    10 wing disc ML-DmD9    30 wing disc ML-DmD16-c3    15 wing disc ML-DmD21    15 wing disc ML-DmD32    13 haltere disc ML-DmD17-c3    28 eye-antennal disc ML-DmD11    19 antennal disc ML-DmD20-c5    10 mixed discs ML-DmD4-c1    16 CNS ML-DmBG1-c1    22 CNS ML-DmBG2-c2    24 tumorous blood cells mbn2    23 ovary fGS/OSS    42 ovary OSC    19 ovary OSS    11 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    32 Schneider line 2 Sg4    13 embryonic 1182-4H    26 embryonic GM2    32 embryonic Kc167    14 embryonic S1    36 embryonic S3    11 leg disc CME L1    15 wing disc CME-W2    16 wing disc ML-DmD8    10 wing disc ML-DmD9    30 wing disc ML-DmD16-c3    15 wing disc ML-DmD21    15 wing disc ML-DmD32    13 haltere disc ML-DmD17-c3    28 eye-antennal disc ML-DmD11    19 antennal disc ML-DmD20-c5    10 mixed discs ML-DmD4-c1    16 CNS ML-DmBG1-c1    22 CNS ML-DmBG2-c2    24 tumorous blood cells mbn2    23 ovary fGS/OSS    42 ovary OSC    19 ovary OSS    11 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  32 Schneider line 2 Sg4    13 embryonic 1182-4H  26 embryonic GM2  32 embryonic Kc167    14 embryonic S1  (36) embryonic S3    11 leg disc CME L1    15 wing disc CME-W2    16 wing disc ML-DmD8    10 wing disc ML-DmD9  30 wing disc ML-DmD16-c3    15 wing disc ML-DmD21    15 wing disc ML-DmD32    13 haltere disc ML-DmD17-c3  28 eye-antennal disc ML-DmD11    19 antennal disc ML-DmD20-c5    10 mixed discs ML-DmD4-c1    16 CNS ML-DmBG1-c1    22 CNS ML-DmBG2-c2    24 tumorous blood cells mbn2    23 ovary fGS/OSS  (42) ovary OSC    19 ovary OSS    11 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    32 Schneider line 2 Sg4    13 embryonic 1182-4H    26 embryonic GM2    32 embryonic Kc167    14 embryonic S1    36 embryonic S3    11 leg disc CME L1    15 wing disc CME-W2    16 wing disc ML-DmD8    10 wing disc ML-DmD9    30 wing disc ML-DmD16-c3    15 wing disc ML-DmD21    15 wing disc ML-DmD32    13 haltere disc ML-DmD17-c3    28 eye-antennal disc ML-DmD11    19 antennal disc ML-DmD20-c5    10 mixed discs ML-DmD4-c1    16 CNS ML-DmBG1-c1    22 CNS ML-DmBG2-c2    24 tumorous blood cells mbn2    23 ovary fGS/OSS    42 ovary OSC    19 ovary OSS    11 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    32 Schneider line 2 Sg4    13 embryonic 1182-4H    26 embryonic GM2    32 embryonic Kc167    14 embryonic S1    36 embryonic S3    11 leg disc CME L1    15 wing disc CME-W2    16 wing disc ML-DmD8    10 wing disc ML-DmD9    30 wing disc ML-DmD16-c3    15 wing disc ML-DmD21    15 wing disc ML-DmD32    13 haltere disc ML-DmD17-c3    28 eye-antennal disc ML-DmD11    19 antennal disc ML-DmD20-c5    10 mixed discs ML-DmD4-c1    16 CNS ML-DmBG1-c1    22 CNS ML-DmBG2-c2    24 tumorous blood cells mbn2    23 ovary fGS/OSS    42 ovary OSC    19 ovary OSS    11 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    30 cold shock, 4-day adult    25 heat shock, 4-day adult    18 Cadmium 50 mM 6 hrs, larvae L3    13 Cadmium 50 mM 12 hrs, larvae L3    23 Cadmium 50 mM 48 hrs, 4-day adult    15 Cadmium 100 mM 48 hrs, 4-day adult    22 Copper 0.5 mM 12 hrs, larvae L3    15 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    16 Zinc 4.5 mM 48 hrs, 4-day adult    13 Ethanol 2.5% 3 hrs, larvae L3    32 Ethanol 5% 3 hrs, larvae L3    15 Ethanol 10% 3 hrs, larvae L3    12 Caffeine 1.5 mg/ml 4 hrs, larvae L3    20 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    23 Caffeine 25 mg/ml 48 hrs, 4-day adult    21 Paraquat 5 mM 48 hrs, 4-day adult    25 Paraquat 10 mM 48 hrs, 4-day adult    29 Rotenone 2 μg 12 hrs, larvae L3    14 Rotenone 8 μg 12 hrs, larvae L3    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  (30) cold shock, 4-day adult    25 heat shock, 4-day adult    18 Cadmium 50 mM 6 hrs, larvae L3    13 Cadmium 50 mM 12 hrs, larvae L3    23 Cadmium 50 mM 48 hrs, 4-day adult    15 Cadmium 100 mM 48 hrs, 4-day adult    22 Copper 0.5 mM 12 hrs, larvae L3    15 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    16 Zinc 4.5 mM 48 hrs, 4-day adult    13 Ethanol 2.5% 3 hrs, larvae L3  (32) Ethanol 5% 3 hrs, larvae L3    15 Ethanol 10% 3 hrs, larvae L3    12 Caffeine 1.5 mg/ml 4 hrs, larvae L3    20 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    23 Caffeine 25 mg/ml 48 hrs, 4-day adult    21 Paraquat 5 mM 48 hrs, 4-day adult    25 Paraquat 10 mM 48 hrs, 4-day adult  (29) Rotenone 2 μg 12 hrs, larvae L3    14 Rotenone 8 μg 12 hrs, larvae L3    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    30 cold shock, 4-day adult    25 heat shock, 4-day adult    18 Cadmium 50 mM 6 hrs, larvae L3    13 Cadmium 50 mM 12 hrs, larvae L3    23 Cadmium 50 mM 48 hrs, 4-day adult    15 Cadmium 100 mM 48 hrs, 4-day adult    22 Copper 0.5 mM 12 hrs, larvae L3    15 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    16 Zinc 4.5 mM 48 hrs, 4-day adult    13 Ethanol 2.5% 3 hrs, larvae L3    32 Ethanol 5% 3 hrs, larvae L3    15 Ethanol 10% 3 hrs, larvae L3    12 Caffeine 1.5 mg/ml 4 hrs, larvae L3    20 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    23 Caffeine 25 mg/ml 48 hrs, 4-day adult    21 Paraquat 5 mM 48 hrs, 4-day adult    25 Paraquat 10 mM 48 hrs, 4-day adult    29 Rotenone 2 μg 12 hrs, larvae L3    14 Rotenone 8 μg 12 hrs, larvae L3    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    30 cold shock, 4-day adult    25 heat shock, 4-day adult    18 Cadmium 50 mM 6 hrs, larvae L3    13 Cadmium 50 mM 12 hrs, larvae L3    23 Cadmium 50 mM 48 hrs, 4-day adult    15 Cadmium 100 mM 48 hrs, 4-day adult    22 Copper 0.5 mM 12 hrs, larvae L3    15 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    16 Zinc 4.5 mM 48 hrs, 4-day adult    13 Ethanol 2.5% 3 hrs, larvae L3    32 Ethanol 5% 3 hrs, larvae L3    15 Ethanol 10% 3 hrs, larvae L3    12 Caffeine 1.5 mg/ml 4 hrs, larvae L3    20 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    23 Caffeine 25 mg/ml 48 hrs, 4-day adult    21 Paraquat 5 mM 48 hrs, 4-day adult    25 Paraquat 10 mM 48 hrs, 4-day adult    29 Rotenone 2 μg 12 hrs, larvae L3    14 Rotenone 8 μg 12 hrs, larvae L3    12 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    30 cold shock, 4-day adult    25 heat shock, 4-day adult    18 Cadmium 50 mM 6 hrs, larvae L3    13 Cadmium 50 mM 12 hrs, larvae L3    23 Cadmium 50 mM 48 hrs, 4-day adult    15 Cadmium 100 mM 48 hrs, 4-day adult    22 Copper 0.5 mM 12 hrs, larvae L3    15 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    16 Zinc 4.5 mM 48 hrs, 4-day adult    13 Ethanol 2.5% 3 hrs, larvae L3    32 Ethanol 5% 3 hrs, larvae L3    15 Ethanol 10% 3 hrs, larvae L3    12 Caffeine 1.5 mg/ml 4 hrs, larvae L3    20 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    23 Caffeine 25 mg/ml 48 hrs, 4-day adult    21 Paraquat 5 mM 48 hrs, 4-day adult    25 Paraquat 10 mM 48 hrs, 4-day adult    29 Rotenone 2 μg 12 hrs, larvae L3    14 Rotenone 8 μg 12 hrs, larvae L3    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  30 cold shock, 4-day adult    25 heat shock, 4-day adult    18 Cadmium 50 mM 6 hrs, larvae L3    13 Cadmium 50 mM 12 hrs, larvae L3    23 Cadmium 50 mM 48 hrs, 4-day adult    15 Cadmium 100 mM 48 hrs, 4-day adult    22 Copper 0.5 mM 12 hrs, larvae L3    15 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    16 Zinc 4.5 mM 48 hrs, 4-day adult    13 Ethanol 2.5% 3 hrs, larvae L3  32 Ethanol 5% 3 hrs, larvae L3    15 Ethanol 10% 3 hrs, larvae L3    12 Caffeine 1.5 mg/ml 4 hrs, larvae L3    20 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    23 Caffeine 25 mg/ml 48 hrs, 4-day adult    21 Paraquat 5 mM 48 hrs, 4-day adult    25 Paraquat 10 mM 48 hrs, 4-day adult  29 Rotenone 2 μg 12 hrs, larvae L3    14 Rotenone 8 μg 12 hrs, larvae L3    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    30 cold shock, 4-day adult    25 heat shock, 4-day adult    18 Cadmium 50 mM 6 hrs, larvae L3    13 Cadmium 50 mM 12 hrs, larvae L3    23 Cadmium 50 mM 48 hrs, 4-day adult    15 Cadmium 100 mM 48 hrs, 4-day adult    22 Copper 0.5 mM 12 hrs, larvae L3    15 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    16 Zinc 4.5 mM 48 hrs, 4-day adult    13 Ethanol 2.5% 3 hrs, larvae L3    32 Ethanol 5% 3 hrs, larvae L3    15 Ethanol 10% 3 hrs, larvae L3    12 Caffeine 1.5 mg/ml 4 hrs, larvae L3    20 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    23 Caffeine 25 mg/ml 48 hrs, 4-day adult    21 Paraquat 5 mM 48 hrs, 4-day adult    25 Paraquat 10 mM 48 hrs, 4-day adult    29 Rotenone 2 μg 12 hrs, larvae L3    14 Rotenone 8 μg 12 hrs, larvae L3    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    30 cold shock, 4-day adult    25 heat shock, 4-day adult    18 Cadmium 50 mM 6 hrs, larvae L3    13 Cadmium 50 mM 12 hrs, larvae L3    23 Cadmium 50 mM 48 hrs, 4-day adult    15 Cadmium 100 mM 48 hrs, 4-day adult    22 Copper 0.5 mM 12 hrs, larvae L3    15 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    16 Zinc 4.5 mM 48 hrs, 4-day adult    13 Ethanol 2.5% 3 hrs, larvae L3    32 Ethanol 5% 3 hrs, larvae L3    15 Ethanol 10% 3 hrs, larvae L3    12 Caffeine 1.5 mg/ml 4 hrs, larvae L3    20 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    23 Caffeine 25 mg/ml 48 hrs, 4-day adult    21 Paraquat 5 mM 48 hrs, 4-day adult    25 Paraquat 10 mM 48 hrs, 4-day adult    29 Rotenone 2 μg 12 hrs, larvae L3    14 Rotenone 8 μg 12 hrs, larvae L3    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_27 mE1_20_mRNA_expression_cluster_02
External Data & Images
Linkouts	BDGP expression data • LP01609 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037094 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG7611-RE FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG7611 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable CG7611EY07631 viable, with Scer\GAL4pnr-MD237 CG7611GD9929 Sterility Allele fertile CG7611EY07631 Other Phenotypes Allele visible, with Scer\GAL4pnr-MD237 CG7611GD9929 Phenotype manifest in Allele mesothoracic tergum, with Scer\GAL4pnr-MD237 CG7611GD9929 trichogen cell, with Scer\GAL4pnr-MD237 CG7611GD9929
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of CG7611 Class Mutagen Stocks Known lesion CG7611EY07631 P-element activity 1 -- CG7611MI01175 1 -- CG7611c04758 piggyBac transposase 0 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG7611 Class Mutagen Stocks Known lesion CG7611GD9929 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG7611KK107547 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG7611NIG.7611R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD9929} NA P{KK107547} NA P{NIG.7611R} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EPgy2}CG7611EY07631 NA miscellaneous insertions Mi{MIC}CG7611MI01175 NA PBac{PB}CG7611c04758 NA
Gene Ontology: Function, Process & Cellular Component ( 1 unique term )
	There is no information supporting a biological process or molecular function term for this gene. (Based on a review of available data before: 2006)
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
cytoplasm inferred from sequence or structural similarity with UniProtKB:Q9H7D7 (assigned by UniProtKB) (UniProtKB Project Members, 2007.3.20)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
CG7611 - CG10824 anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based (Mintseris et al., 2009.11.23, Guruharsha et al., 2011) CG7611 - CG14995 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG7611 - CG16789 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG7611 - CG4151 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG7611 - CG6617 anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based (Mintseris et al., 2009.11.23, Guruharsha et al., 2011) CG7611 - RanBPM anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based (Mintseris et al., 2009.11.23, Guruharsha et al., 2011) CG7611 - Yippee experimental knowledge based (Guruharsha et al., 2011) CG7611 - kay anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG7611 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 65631 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0037094 DroID - A comprehensive database of gene and protein interactions. • FBgn0037094 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 40386 SignaLink - A protein-protein and protein-miRNA interaction database with multi-layered structure and multiple confidence scores. • Q7K0L4
Orthologs
OrthoDB Orthologs (43) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6FR1B6 Dipteran inclusive ortholog search EOG6QNN4D Insect inclusive ortholog search EOG6KH1Q3 Arthropod inclusive ortholog search EOG6Z613P Metazoa inclusive ortholog search EOG6KT2BZ
Orthologs in Drosophila Species (EOG6FR1B6)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG7611     Drosophila simulans   Dsim\GD14968 Y   Drosophila sechellia   Dsec\GM22377 Y   Drosophila erecta   Dere\GG16194 Y   Drosophila yakuba   Dyak\GE19765 Y   Drosophila ananassae   Dana\GF23722 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA20480 Y   Drosophila persimilis   Dper\GL11887 Y   Drosophila willistoni   Dwil\GK20426 Y   Drosophila virilis   Dvir\GJ11835 Y   Drosophila mojavensis   Dmoj\GI13472 Y   Drosophila grimshawi   Dgri\GH16747 Y
Orthologs in non-Drosophila Dipterans (EOG6QNN4D)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL006552   Anopheles gambiae Malaria mosquito  Agam\AGAP006042   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ000286
Orthologs in non-Dipteran Insects (EOG6KH1Q3)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB48563   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG007465   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH14640   Atta cephalotes Leafcutter ant  Acep\ACEP24035   Camponotus floridanus Florida carpenter ant  Cflo\CFLO20424   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL16484   Linepithema humile Argentine ant  Lhum\LH19181   Pogonomyrmex barbatus Red harvester ant  Pbar\PB18430   Solenopsis invicta Red fire ant  Sinv\SINV22704   Solenopsis invicta Red fire ant  Sinv\SINV22709   Acyrthosiphon pisum Pea aphid  Apim\ACYPI005689   Bombyx mori Silkmoth  Bmor\BGIBMGA005843   Bombyx mori Silkmoth  Bmor\BGIBMGA005842   Pediculus humanus Human body louse  Phum\PHUM346310   Tribolium castaneum Red flour beetle  Tcas\GLEAN_08294
Orthologs in non-Insect Arthropods (EOG6Z613P)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\JGI_V11_302220   Ixodes scapularis Deer tick  Isca\ISCW000130
Orthologs in non-Arthropod Metazoa (EOG6KT2BZ)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\Y39H10A.6   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_014126gn   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_010161gn   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_004722gn   Danio rerio Zebrafish  Drer\wdr26   Danio rerio Zebrafish  Drer\CABZ01044136.1   Xenopus tropicalis Western clawed frog  Xtro\wdr26   Gallus gallus Domestic chicken  Ggal\WDR26   Mus musculus House mouse  Mmus\Wdr26   Rattus norvegicus Norway rat  Rnor\Wdr26   Homo sapiens Human  Hsap\WDR26
Human Orthologs (1)
Gene OMIM HGNC Hsap\WDR26
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD14968 Drosophila sechellia Dsec\GM22377 Drosophila erecta Dere\GG16194 Drosophila yakuba Dyak\GE19765 Drosophila ananassae Dana\GF23722 Drosophila pseudoobscura pseudoobscura Dpse\GA20480 Drosophila persimilis Dper\GL11887 Drosophila willistoni Dwil\GK20426 Drosophila virilis Dvir\GJ11835 Drosophila mojavensis Dmoj\GI13472 Drosophila grimshawi Dgri\GH16747
Stocks & Reagents
Stocks Listed in FlyBase ( 4 )
Bloomington	16852 y1 w67c23; P{EPgy2}CG7611EY07631 34162 y1 w*; Mi{MIC}CG7611MI01175/TM3, Sb1 Ser1
VDRC	v108731 P{KK107547}VIE-260B v25511 w1118; P{GD9929}v25511/CyO
Genomic Clones ( 2 )
	BACR03O18 BACR26P10 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 656 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LP01609
Other clones	DPiM_LP01609
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH07806 GH11959 GH18490 GH20901 GH24953 GH26006 GH28630 GM30009 HL02934 LD02224 LD05180 LD12157 LD17326 LD20213 LD20256 LD23260 LD30577 LD34484 LD37791 LD38476 LD38583 LD39470 LD39848 LD43946 LD45139 LP01621 LP08825 LP19087 RE06756 RE09451 RE11410 RE22333 RE25083 RE26404 RE28960 RE29638 RE30924 RE30947 RE35496 RE37162 RE41202 RE49350 RE50464 RE51250 RE53119 RE57142 RE57356 RE60112 RE63009 RE63367 RE65324 RE65823 RE65943 RE68329 RE70758 RE70911 RE74251 SD01226 SD02789 SD02791 SD14676 SD16854 SD18339 SD21335 SD24908 SD25573 SD25877 SD26059
Other clones	10132 18615 39912 45670 45847 53147 67360 74391 74865 82466 82932 117884 118010 145269 145879 146924 159336 191463 214531.46 528217 558071 558194 CK01.25C.E12 CK01.64D.F10 CK01.75D.G6 CK01.87D.C2 CK01.87D.G1 CK01.127D.A4 CK02485 Dmel_neb_013907_0923_1437 Dmel_neb_014892_0878_1799 EK059359 EK065155 EK069325 EK098526 EK109646 EK130564 EK153433 EK161861 EK164532 EK170016 EK195447 EK206039 EK207309 EK216617 EK237128 EK249624 EK252164 EK262427 EK294150 EN09051 EN12935 EN13158 EP08241 ESG013c.E21_G03 ESG0112b.B21_G02 LD38826 RP003000611 RP003001416 RP003002097 RP003005983 RP003010124 RP003010579 RP003011723 RP003012334 RP003014673 RP003016021 RP003018739 RP003019757 RP003020401 RP003021946 RP003026179 RP003027391 RP003029260 RP003032477 RP003033798 RP003038143 RP003038275 RP003038663 RP003040749 RP003040937 RP003040942 RP003043870 RP003044455 RP003046335 RP003046629 RP003047364 RP003050245 RP003050662 RP003051918 RP003052577 RP003052713 RP003054173 RP003058484 RP003058761 RP003058774 RP003060681 RP003062429 RP003062447 RP003063836 RP003065018 RP003068372 RP003070373 RP003071566 RP003073375 RP003073810 RP003074745 RP003075069 RP003075907 RP003078600 RP003080959 RP003081289 RP003082351 RP003085301 RP003089874 RP003090495 RP003092049 RP003092681 RP003093186 RP003096324 RP003098541 RP003101610 RP003102677 RP003103726 RP003104666 RP003106958 RP003107195 RP003107516 RP003109870 RP003110545 RP003111218 RP003112205 RP003112294 RP003115376 RP003117802 RP003118173 RP003118510 RP003119756 RP003121095 RP003121698 RP003123296 RP003128942 RP003129129 RP003131437 RP003131883 RP003133628 RP003135389 RP003138074 RP003141047 RP003141091 RP003144262 RP003145151 RP003148369 RP003148848 RP003152565 RP003154867 RP003155472 RP003158348 RP003158576 RP003163632 RP003164255 RP003164862 RP003167986 RP003168289 RP003171164 RP003172355 RP003172366 RP003176920 RP003177083 RP003178021 RP003178387 RP003179615 RP003179809 RP003180244 RP003180465 RP003181622 RP003181753 RP003181858 RP003182747 RP003183686 RP003185744 RP003186190 RP003186502 RP003187030 RP003188350 RP003188414 RP003188881 RP003189455 RP003191338 RP003192110 RP003192960 RP003193039 RP003193556 RP003193836 RP003196344 RP003196574 RP003197947 RP003198215 RP003201859 RP003202400 RP003203242 RP003204337 RP003205270 RP003205551 RP003207952 RP003211310 RP003211672 RP003211891 RP003212057 RP003212503 RP003216793 RP003216880 RP003218568 RP003219813 RP003220848 RP003221937 RP003222962 RP003225019 RP003225794 RP003227596 RP003227676 RP003227710 RP003227857 RP003228076 RP003228109 RP003228796 RP003229307 RP003229531 RP003229565 RP003229698 RP003231851 RP003232528 RP003234729 RP003236137 RP003238085 RP003239261 RP003239284 RP003240382 RP003240690 RP003242379 RP003244780 RP003246320 RP003246776 RP003247778 RP003248601 RP003248666 RP003249189 RP003250462 RP003251764 RP003254717 RP003255352 RP003255435 RP003255612 RP003255675 RP003256960 RP003259969 RP003260169 RP003260836 RP003261731 RP003261929 RP003262750 RP003263253 RP003263275 RP003264959 RP003265332 RP003266665 RP003268277 RP003268822 RP003273971 RP003274066 RP003278470 RP003278753 RP003283167 RP003284190 RP003284453 RP003285695 RP003285800 RP003291924 RP003291980 RP003294845 RP003297952 RP003298928 RP003299112 RP003299426 RP003299743 RP003301074 RP003302402 RP003302565 RP003303872 RP003304274 RP003304950 RP003305008 RP003305732 RP003310259 RP003310876 RP003312516 RP003313500 RP003313830 RP003313841 RP003313910 RP003314844 RP003314948 RP003315419 RP003316581 RP003317147 RP003317326 RP003318429 RP003319114 RP003322114 RP003322361 RP003323159 RP003324920 RP003325992 RP003326732 RP003327367 RP003328184 RP003328713 RP003329302 RP003329719 RP003331641 RP003333248 RP003333662 RP003334919 RP003337237 RP003337885 RP003340611 RP003345863 RP003353563 RP003355159 RP003355502 RP003356600 RP003357302 RP003357529 RP003358580 RP003358916 RP003359622 RP003360136 RP003360573 RP003362681 RP003364482 RP003365191 RP003366882 RP003367703 RP003368778 RP003370046 RP003372597 RP003373709 RP003382167 RP003383842 RP003384824 RP003385480 RP003386622 RP003386755 RP003387078 RP003387983 RP003395428 RP003396591 RP003396684 RP003396842 RP003396897 RP003397066 RP003397178 RP003398585 RP003400353 RP003400535 RP003400913 RP003402360 RP003403622 RP003406962 RP003409698 RP003410833 RP003411732 RP003412400 RP003413498 RP003414333 RP003414434 RP003416611 RP003417540 RP003418907 RP003419867 RP003420625 RP003426427 RP003428633 RP003432404 RP003434393 RP003434765 RP003435290 RP003435760 RP003438442 RP003439272 RP003440475 RP003441468 RP003442056 RP003444176 RP003445486 RP003447233 RP003447649 RP003448482 RP003451293 RP003451366 RP003453147 RP003455544 RP003457737 RP003458101 RP003461649 RP003462356 RP003462490 RP003464706 RP003465252 RP003466897 RP003468121 RP003469189 RP003470230 RP003472840 RP003476003 RP003481672 RP003482940 RP003483782 RP003485574 RP003487378 RP003487563 RP003488044 RP003489308 RP003489732 RP003491052 RP003491487 RP003491550 RP003492336 RP003494103 RP003496109 RP003496257 RP003497030 RP003497952 RP003498586 RP003500749 RP003502289 RP003503049 RP003505430 RP003506580 RP003507017 RP003507306 RP003507906 RP003508994 RP003511842 RP003511863 RP003512247 RP003514854 RP003515363 RP003515699 RP003517891 RP003519446 RP003519478 RP003521046 RP003521745 RP003522005 RP003522089 RP003522158 RP003522512 RP003523291 RP003523793 RP003524266 RP003525276 RP003525474 RP003530307 RP003530961 RP003531532 RP003534241 RP003537288 RP003538012 RP003538058 RP003539652 RP003540200 RP003541689 RP003541700 RP003542276 RP003545220 RP003545366 RP003545666 RP003552156 RP003553236 RP003554493 RP003556242 RP003556374 RP003556385 RP003561174 RP003562017 RP003563236 RP003563468 RP003563550 RP003564433 RP003564641 RP003569465 RP003570217 RP003578760 RP003579231 RP003580797 RP003582224 RP003582313 RP003583332 RP003586676 RP003586967 RP003587673 RP003587899 RP003588021 RP003588817 RP003592270 RP003596049 RP003598531 RP003599547 RP003599634 RP003600306 RP003601971 RP003606308 RP003612217 RP003615645 RP003616035 RP003617673 RP003618099 RP003618779 RP003619358 RP003622654 RP003622796 RP003625320 RP003625355 RP003627141 RP003630153 RP003631749 RP003632711 RP003634002 RP003634077 RP003634309 RP003634778 RP003637083 RP003637447 RP003638728 RP003640402 RP003641782 RP003643485 RP003645288 RP003646944 RP003648186 RP003648297 RP003648755 RP003649199 RP003649802 RP003650587 RP003651354 RP003652060 RP003654862 RP003654963 RP003656085 RP003656621 RP003657004 RP003657689 RP003657738 RP003662848 RP003663364 RP003663530 RP003665239 RP003667694 RP003670903 RP003671710 RP003673752 RP003674487 RP003678256 RP003678854 RP003679064 RP003679757 RP003680856 RP004094045 RP004124881 RP004149481 RP004182787 RP004205477 RP004211267 RP004218644 RP004225458 RP004226189 RP004235757 RP004248026 RP004250229 RP004252288 RP004261677 RP004355594 RP004495981 RP004496940
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0037094 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 40386
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_141069 NM_168913 NM_168914 NM_168915 NM_168916 NM_168917 NM_168918 NM_168919 NM_001170018 RefSeq (Proteins) • NP_649326 NP_730644 NP_730645 NP_730646 NP_730647 NP_730648 NP_730649 NP_730650 NP_001163489 DDBJ / EMBL / GenBank • AAF51739 AAG22180 AAG22181 AAG22182 AAL39862 AAN12172 AAN12173 AAN12174 AAN12175 ACZ94760 AI258410 AY069717 CL528048 CZ469492 Entrez Gene - A searchable database of RefSeq genes. • 40386 UniProtKB/Swiss-Prot • Q7K0L4 UniProtKB/TrEMBL • E1JHX5
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • WD40 repeat (IPR001680) LisH dimerisation motif (IPR006594) CTLH, C-terminal LisH motif (IPR006595) WD40 repeat, conserved site (IPR019775) G-protein beta WD-40 repeat (IPR020472) WD40-repeat-containing domain (IPR017986) WD40/YVTN repeat-like-containing domain (IPR015943) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • LP01609
Linkouts
	BioGRID - A database of protein and genetic interactions • 65631 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0037094 DroID - A comprehensive database of gene and protein interactions. • FBgn0037094 DRSC - Results from RNAi screens. • FBgn0037094 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037094 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG7611-RE FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0037094 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 40386 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 40386 modMine - Data generated by the modENCODE project. • FBgn0037094 SignaLink - A protein-protein and protein-miRNA interaction database with multi-layered structure and multiple confidence scores. • Q7K0L4
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	CG7611 (UniProtKB Project Members, 2007.3.20, Przewloka et al., 2007, Finan et al., 2011, Higa et al., 2006, Keleman et al., 2009.8.5, Japanese National Institute of Genetics, 2012.5.21) WDR26 (Higa et al., 2006)
Name Synonym
Secondary FlyBase IDs
References ( 23 )
Generate a list of	All references relating to this gene ( 23 )
List References by type	Research paper  ( 3 ) Supplementary material  ( 5 ) Personal communication to FlyBase  ( 7 ) FlyBase analysis  ( 2 ) Protein sequence record  ( 1 ) Stock list  ( 1 ) Website  ( 1 ) Curated genome annotation  ( 2 )
Recent research papers ( 1 )
	Finan et al., 2011, Proc. Natl. Acad. Sci. U.S.A. 108(14): 5566--5571 From the Cover: Proteomics approach to study the functions of Drosophila myosin VI through identification of multiple cargo-binding proteins. [FBrf0213355] Show all research papers ...