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Gene Dmel\CG11248

General Information
Symbol	Dmel\CG11248	Species	D. melanogaster
Name		Annotation symbol	CG11248
Feature type	protein_coding_gene	FlyBase ID	FBgn0037117
Gene Model Status	Current	Stock availability	7 publicly available
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	78E3-78E4	Sequence location	3L:21,673,186..21,676,331 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG11248 (FBgn0037117). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 5 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult central nervous system, adult ovary, adult testis. Comments on Affy2 ProbeSet: ProbeSet 1638930_s_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of CG11248. Gene sequence location is 3L:21673186..21676331.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features HFA11644 BKN24108
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 78E3-78E4   Limits computationally determined from genome sequence between P{lacW}l(3)j1B10j1B10 and P{lacW}l(3)j2C4j2C4
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG11248 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG11248-RA FBtr0078431  NM_141091   2935   830 CG11248-RB FBtr0078430  NM_168934   2882   830
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG11248-PA   FBpp0078085   96.1   830   6.03     NP_649348   AAF51765 CG11248-PB   FBpp0078084   96.1   830   6.03     NP_730678   AAN12187
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA439879   AA538747   AA949212   AE014296 AAF51765   AE014296 AAN12187   AI512306   AI514332   AW943696   AY118582 AAM49951   BF487827   BI635825   CZ466942   CZ480998   CZ484074   CZ484215   EC202239   GH941500   GH948783   GH951218   GH964571   GH965002   GH965401   GH965661   GH970130   GH970706   GH970926   GH972321   GH973244   GH980324   GH982277
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VNZ7
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
expression microarray Stage Tissue/Position (including subcellular localization) Reference adult stage | female     (Arbeitman et al., 2004)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0037117    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0037117 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0037117 expression level Developmental Stage   Expression Level embryo 00-02hr    1642 embryo 02-04hr    1303 embryo 04-06hr    960 embryo 06-08hr    915 embryo 08-10hr    1268 embryo 10-12hr    1303 embryo 12-14hr    1316 embryo 14-16hr    726 embryo 16-18hr    806 embryo 18-20hr    540 embryo 20-22hr    1106 embryo 22-24hr    1183 larva L1    280 larva L2    358 larva L3 12hr old    241 larva L3 puffstage 1-2    331 larva L3 puffstage 3-6    482 larva L3 puffstage 7-9    746 white prepupae new    714 white prepupae 12hr    698 white prepupae 24hr    849 pupae 2d postWPP    841 pupae 3d postWPP    597 pupae 4d postWPP    504 adult male 01day    853 adult male 05day    971 adult male 30day    710 adult female 01day    520 adult female 05day    1289 adult female 30day    1217 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1642) embryo 02-04hr  (1303) embryo 04-06hr  (960) embryo 06-08hr  (915) embryo 08-10hr  (1268) embryo 10-12hr  (1303) embryo 12-14hr  (1316) embryo 14-16hr  (726) embryo 16-18hr  (806) embryo 18-20hr  (540) embryo 20-22hr  (1106) embryo 22-24hr  (1183) larva L1  (280) larva L2  (358) larva L3 12hr old  (241) larva L3 puffstage 1-2  (331) larva L3 puffstage 3-6  (482) larva L3 puffstage 7-9  (746) white prepupae new  (714) white prepupae 12hr  (698) white prepupae 24hr  (849) pupae 2d postWPP  (841) pupae 3d postWPP  (597) pupae 4d postWPP  (504) adult male 01day  (853) adult male 05day  (971) adult male 30day  (710) adult female 01day  (520) adult female 05day  (1289) adult female 30day  (1217) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (1642) embryo 02-04hr    1303 embryo 04-06hr    960 embryo 06-08hr    915 embryo 08-10hr    1268 embryo 10-12hr    1303 embryo 12-14hr    1316 embryo 14-16hr    726 embryo 16-18hr    806 embryo 18-20hr    540 embryo 20-22hr    1106 embryo 22-24hr    1183 larva L1    280 larva L2    358 larva L3 12hr old    241 larva L3 puffstage 1-2    331 larva L3 puffstage 3-6    482 larva L3 puffstage 7-9    746 white prepupae new    714 white prepupae 12hr    698 white prepupae 24hr    849 pupae 2d postWPP    841 pupae 3d postWPP    597 pupae 4d postWPP    504 adult male 01day    853 adult male 05day    971 adult male 30day    710 adult female 01day    520 adult female 05day    1289 adult female 30day    1217 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1642 embryo 02-04hr    1303 embryo 04-06hr    960 embryo 06-08hr    915 embryo 08-10hr    1268 embryo 10-12hr    1303 embryo 12-14hr    1316 embryo 14-16hr    726 embryo 16-18hr    806 embryo 18-20hr    540 embryo 20-22hr    1106 embryo 22-24hr    1183 larva L1    280 larva L2    358 larva L3 12hr old    241 larva L3 puffstage 1-2    331 larva L3 puffstage 3-6    482 larva L3 puffstage 7-9    746 white prepupae new    714 white prepupae 12hr    698 white prepupae 24hr    849 pupae 2d postWPP    841 pupae 3d postWPP    597 pupae 4d postWPP    504 adult male 01day    853 adult male 05day    971 adult male 30day    710 adult female 01day    520 adult female 05day    1289 adult female 30day    1217 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1642 embryo 02-04hr    1303 embryo 04-06hr    960 embryo 06-08hr    915 embryo 08-10hr    1268 embryo 10-12hr    1303 embryo 12-14hr    1316 embryo 14-16hr    726 embryo 16-18hr    806 embryo 18-20hr    540 embryo 20-22hr    1106 embryo 22-24hr    1183 larva L1    280 larva L2    358 larva L3 12hr old    241 larva L3 puffstage 1-2    331 larva L3 puffstage 3-6    482 larva L3 puffstage 7-9    746 white prepupae new    714 white prepupae 12hr    698 white prepupae 24hr    849 pupae 2d postWPP    841 pupae 3d postWPP    597 pupae 4d postWPP    504 adult male 01day    853 adult male 05day    971 adult male 30day    710 adult female 01day    520 adult female 05day    1289 adult female 30day    1217 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0037117 expression level Developmental Stage   Expression Level embryo 00-02hr    1642 embryo 02-04hr    1303 embryo 04-06hr    960 embryo 06-08hr    915 embryo 08-10hr    1268 embryo 10-12hr    1303 embryo 12-14hr    1316 embryo 14-16hr    726 embryo 16-18hr    806 embryo 18-20hr    540 embryo 20-22hr    1106 embryo 22-24hr    1183 larva L1    280 larva L2    358 larva L3 12hr old    241 larva L3 puffstage 1-2    331 larva L3 puffstage 3-6    482 larva L3 puffstage 7-9    746 white prepupae new    714 white prepupae 12hr    698 white prepupae 24hr    849 pupae 2d postWPP    841 pupae 3d postWPP    597 pupae 4d postWPP    504 adult male 01day    853 adult male 05day    971 adult male 30day    710 adult female 01day    520 adult female 05day    1289 adult female 30day    1217 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1642) embryo 02-04hr  (1303) embryo 04-06hr  (960) embryo 06-08hr  (915) embryo 08-10hr  (1268) embryo 10-12hr  (1303) embryo 12-14hr  (1316) embryo 14-16hr  (726) embryo 16-18hr  (806) embryo 18-20hr  (540) embryo 20-22hr  (1106) embryo 22-24hr  (1183) larva L1  (280) larva L2  (358) larva L3 12hr old  (241) larva L3 puffstage 1-2  (331) larva L3 puffstage 3-6  (482) larva L3 puffstage 7-9  (746) white prepupae new  (714) white prepupae 12hr  (698) white prepupae 24hr  (849) pupae 2d postWPP  (841) pupae 3d postWPP  (597) pupae 4d postWPP  (504) adult male 01day  (853) adult male 05day  (971) adult male 30day  (710) adult female 01day  (520) adult female 05day  (1289) adult female 30day  (1217) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  1642 embryo 02-04hr    1303 embryo 04-06hr    960 embryo 06-08hr    915 embryo 08-10hr    1268 embryo 10-12hr    1303 embryo 12-14hr    1316 embryo 14-16hr    726 embryo 16-18hr    806 embryo 18-20hr    540 embryo 20-22hr    1106 embryo 22-24hr    1183 larva L1    280 larva L2    358 larva L3 12hr old    241 larva L3 puffstage 1-2    331 larva L3 puffstage 3-6    482 larva L3 puffstage 7-9    746 white prepupae new    714 white prepupae 12hr    698 white prepupae 24hr    849 pupae 2d postWPP    841 pupae 3d postWPP    597 pupae 4d postWPP    504 adult male 01day    853 adult male 05day    971 adult male 30day    710 adult female 01day    520 adult female 05day    1289 adult female 30day    1217 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1642 embryo 02-04hr    1303 embryo 04-06hr    960 embryo 06-08hr    915 embryo 08-10hr    1268 embryo 10-12hr    1303 embryo 12-14hr    1316 embryo 14-16hr    726 embryo 16-18hr    806 embryo 18-20hr    540 embryo 20-22hr    1106 embryo 22-24hr    1183 larva L1    280 larva L2    358 larva L3 12hr old    241 larva L3 puffstage 1-2    331 larva L3 puffstage 3-6    482 larva L3 puffstage 7-9    746 white prepupae new    714 white prepupae 12hr    698 white prepupae 24hr    849 pupae 2d postWPP    841 pupae 3d postWPP    597 pupae 4d postWPP    504 adult male 01day    853 adult male 05day    971 adult male 30day    710 adult female 01day    520 adult female 05day    1289 adult female 30day    1217 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1642 embryo 02-04hr    1303 embryo 04-06hr    960 embryo 06-08hr    915 embryo 08-10hr    1268 embryo 10-12hr    1303 embryo 12-14hr    1316 embryo 14-16hr    726 embryo 16-18hr    806 embryo 18-20hr    540 embryo 20-22hr    1106 embryo 22-24hr    1183 larva L1    280 larva L2    358 larva L3 12hr old    241 larva L3 puffstage 1-2    331 larva L3 puffstage 3-6    482 larva L3 puffstage 7-9    746 white prepupae new    714 white prepupae 12hr    698 white prepupae 24hr    849 pupae 2d postWPP    841 pupae 3d postWPP    597 pupae 4d postWPP    504 adult male 01day    853 adult male 05day    971 adult male 30day    710 adult female 01day    520 adult female 05day    1289 adult female 30day    1217 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0037117    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0037117 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult central nervous system, adult ovary, adult testis. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0037117 expression level Tissue   Expression Level Larval Central Nervous System    98.875 Larval Midgut    49 Larval Hindgut    41.6 Larval Malpighian Tubules    89.4 Larval Fat Body    75.6 Larval Salivary Gland    68.4 Larval Trachea    33.275 Larval Carcass    54.575 Adult Head    61.6 Adult Eye    55.4 Adult Brain    176.8 Adult Thoracic-Abdominal Ganglion    173.9 Adult Crop    50.7 Adult Midgut    43.7 Adult Hindgut    42.9 Adult Malpighian Tubules    73.8 Adult Fat Body    42.7 Adult Salivary Gland    85.4 Adult Heart    37.15 Adult VirginFemale Spermatheca    58 Adult InseminatedFemale Spermatheca    56.6 Adult Ovary    111.8 Adult Testis    196.6 Adult Male Accessory Gland    51.5 Adult Carcass    47.8 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    98.875 Larval Midgut    49 Larval Hindgut    41.6 Larval Malpighian Tubules    89.4 Larval Fat Body    75.6 Larval Salivary Gland    68.4 Larval Trachea    33.275 Larval Carcass    54.575 Adult Head    61.6 Adult Eye    55.4 Adult Brain    176.8 Adult Thoracic-Abdominal Ganglion    173.9 Adult Crop    50.7 Adult Midgut    43.7 Adult Hindgut    42.9 Adult Malpighian Tubules    73.8 Adult Fat Body    42.7 Adult Salivary Gland    85.4 Adult Heart    37.15 Adult VirginFemale Spermatheca    58 Adult InseminatedFemale Spermatheca    56.6 Adult Ovary    111.8 Adult Testis    196.6 Adult Male Accessory Gland    51.5 Adult Carcass    47.8 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    98.875 Larval Midgut    49 Larval Hindgut    41.6 Larval Malpighian Tubules    89.4 Larval Fat Body    75.6 Larval Salivary Gland    68.4 Larval Trachea    33.275 Larval Carcass    54.575 Adult Head    61.6 Adult Eye    55.4 Adult Brain    176.8 Adult Thoracic-Abdominal Ganglion    173.9 Adult Crop    50.7 Adult Midgut    43.7 Adult Hindgut    42.9 Adult Malpighian Tubules    73.8 Adult Fat Body    42.7 Adult Salivary Gland    85.4 Adult Heart    37.15 Adult VirginFemale Spermatheca    58 Adult InseminatedFemale Spermatheca    56.6 Adult Ovary    111.8 Adult Testis    196.6 Adult Male Accessory Gland    51.5 Adult Carcass    47.8 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    98.875 Larval Midgut    49 Larval Hindgut    41.6 Larval Malpighian Tubules    89.4 Larval Fat Body    75.6 Larval Salivary Gland    68.4 Larval Trachea    33.275 Larval Carcass    54.575 Adult Head    61.6 Adult Eye    55.4 Adult Brain    176.8 Adult Thoracic-Abdominal Ganglion    173.9 Adult Crop    50.7 Adult Midgut    43.7 Adult Hindgut    42.9 Adult Malpighian Tubules    73.8 Adult Fat Body    42.7 Adult Salivary Gland    85.4 Adult Heart    37.15 Adult VirginFemale Spermatheca    58 Adult InseminatedFemale Spermatheca    56.6 Adult Ovary    111.8 Adult Testis    196.6 Adult Male Accessory Gland    51.5 Adult Carcass    47.8 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0037117 expression level Tissue   Expression Level Larval Central Nervous System    98.875 Larval Midgut    49 Larval Hindgut    41.6 Larval Malpighian Tubules    89.4 Larval Fat Body    75.6 Larval Salivary Gland    68.4 Larval Trachea    33.275 Larval Carcass    54.575 Adult Head    61.6 Adult Eye    55.4 Adult Brain    176.8 Adult Thoracic-Abdominal Ganglion    173.9 Adult Crop    50.7 Adult Midgut    43.7 Adult Hindgut    42.9 Adult Malpighian Tubules    73.8 Adult Fat Body    42.7 Adult Salivary Gland    85.4 Adult Heart    37.15 Adult VirginFemale Spermatheca    58 Adult InseminatedFemale Spermatheca    56.6 Adult Ovary    111.8 Adult Testis    196.6 Adult Male Accessory Gland    51.5 Adult Carcass    47.8 Expression Level Scale  None   Low   Moderate  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    98.875 Larval Midgut    49 Larval Hindgut    41.6 Larval Malpighian Tubules    89.4 Larval Fat Body    75.6 Larval Salivary Gland    68.4 Larval Trachea    33.275 Larval Carcass    54.575 Adult Head    61.6 Adult Eye    55.4 Adult Brain    176.8 Adult Thoracic-Abdominal Ganglion    173.9 Adult Crop    50.7 Adult Midgut    43.7 Adult Hindgut    42.9 Adult Malpighian Tubules    73.8 Adult Fat Body    42.7 Adult Salivary Gland    85.4 Adult Heart    37.15 Adult VirginFemale Spermatheca    58 Adult InseminatedFemale Spermatheca    56.6 Adult Ovary    111.8 Adult Testis    196.6 Adult Male Accessory Gland    51.5 Adult Carcass    47.8 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    98.875 Larval Midgut    49 Larval Hindgut    41.6 Larval Malpighian Tubules    89.4 Larval Fat Body    75.6 Larval Salivary Gland    68.4 Larval Trachea    33.275 Larval Carcass    54.575 Adult Head    61.6 Adult Eye    55.4 Adult Brain    176.8 Adult Thoracic-Abdominal Ganglion    173.9 Adult Crop    50.7 Adult Midgut    43.7 Adult Hindgut    42.9 Adult Malpighian Tubules    73.8 Adult Fat Body    42.7 Adult Salivary Gland    85.4 Adult Heart    37.15 Adult VirginFemale Spermatheca    58 Adult InseminatedFemale Spermatheca    56.6 Adult Ovary    111.8 Adult Testis    196.6 Adult Male Accessory Gland    51.5 Adult Carcass    47.8 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    98.875 Larval Midgut    49 Larval Hindgut    41.6 Larval Malpighian Tubules    89.4 Larval Fat Body    75.6 Larval Salivary Gland    68.4 Larval Trachea    33.275 Larval Carcass    54.575 Adult Head    61.6 Adult Eye    55.4 Adult Brain    176.8 Adult Thoracic-Abdominal Ganglion    173.9 Adult Crop    50.7 Adult Midgut    43.7 Adult Hindgut    42.9 Adult Malpighian Tubules    73.8 Adult Fat Body    42.7 Adult Salivary Gland    85.4 Adult Heart    37.15 Adult VirginFemale Spermatheca    58 Adult InseminatedFemale Spermatheca    56.6 Adult Ovary    111.8 Adult Testis    196.6 Adult Male Accessory Gland    51.5 Adult Carcass    47.8 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    61.6   NA  Eye    55.4   NA  Brain    176.8   98.875  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    173.9   NA  Crop    50.7   49  Midgut    43.7   41.6  Hindgut    42.9   89.4  Malpighian Tubules    73.8   75.6  Fat Body    42.7   68.4  Salivary Gland    85.4   NA  Heart    37.15   33.275  Trachea    NA   NA  VirginFemale Spermatheca    58   NA  InseminatedFemale Spermatheca    56.6   NA  Ovary    111.8   NA  Testis    196.6   NA  Male Accessory Gland    51.5   54.575  Carcass    47.8 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_01
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037117 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11248-RB FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG11248 Stages(s) 1-3 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable CG11248f01748 viable, with Scer\GAL4pnr-MD237 CG11248GD7249 Sterility Allele fertile CG11248f01748 Phenotype manifest in Allele
Classical Alleles ( 4 )
For All Classical Alleles Show
Allele of CG11248 Class Mutagen Stocks Known lesion CG11248f01748 piggyBac transposase 2 -- CG11248c01150 piggyBac transposase 1 -- CG11248e03225 piggyBac transposase 1 -- CG11248f01608 piggyBac transposase 1 --
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG11248 Class Mutagen Stocks Known lesion CG11248GD7249 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD7249} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions PBac{PB}CG11248c01150 NA PBac{RB}CG11248e03225 NA PBac{WH}CG11248f01608 NA PBac{WH}CG11248f01748 NA
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG11248 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 65653 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0037117 DroID - A comprehensive database of gene and protein interactions. • FBgn0037117 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 40411
Orthologs
Genome-wide drosophilid orthologs	Dana\GF25163 Dere\GG16216 Dgri\GH16369 Dmoj\GI11560 Dper\GL24855 Dpse\GA10864 Dsec\GM22398 Dvir\GJ11240 Dwil\GK17057 Dyak\GE23030
Curated drosophilid orthologs	Dpse\GA10864
Linkouts	OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0240231 FBgn0237118 FBgn0219056 FBgn0198501 FBgn0177268 FBgn0070920 FBgn0162443 FBgn0134320 FBgn0123840 FBgn0108451 FBgn0102155
Stocks & Reagents
Stocks Listed in FlyBase ( 7 )
Bloomington	18467 w1118; PBac{WH}CG11248f01748
Harvard	- PBac{PB}CG11248c01150 - PBac{RB}CG11248e03225 - PBac{WH}CG11248f01608 - PBac{WH}CG11248f01748
VDRC	v42950 w1118; P{GD7249}v42950 v42951 w1118; P{GD7249}v42951
Genomic Clones ( 1 )
	BACR22O03 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 23 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD44094
Other clones	DPiM_LD44094
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT22886 LD14560 LD18347 LD28021 LD40112 SD17332
Other clones	101648 RP004165835 RP004193810 RP004223456 RP004242273 RP004266951 RP004384833 RP004399270 RP004420451 RP004423246 RP004431855 RP004488823 RP004492949 RP004496855 RP004502700
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0037117 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 40411
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_141091 NM_168934 RefSeq (Proteins) • NP_649348 NP_730678 DDBJ / EMBL / GenBank • AAF51765 AAM49951 AAN12187 AI512306 AW943696 AY118582 CZ466942 CZ480998 CZ484074 CZ484215 Entrez Gene - A searchable database of RefSeq genes. • 40411 UniProtKB/TrEMBL • Q9VNZ7
Other Crossreferences
Linkouts
	BioGRID - A database of protein and genetic interactions • 65653 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0037117 DroID - A comprehensive database of gene and protein interactions. • FBgn0037117 DRSC - Results from RNAi screens. • FBgn0037117 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037117 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11248-RB FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0037117 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 40411 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 40411 modMine - Data generated by the modENCODE project. • FBgn0037117 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0240231 FBgn0237118 FBgn0219056 FBgn0198501 FBgn0177268 FBgn0070920 FBgn0162443 FBgn0134320 FBgn0123840 FBgn0108451 FBgn0102155
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG11248
Name Synonym
Secondary FlyBase IDs
References ( 13 )
Research paper	Arbeitman et al., 2004, Development 131(9): 2007--2021 A genomic analysis of Drosophila somatic sexual differentiation and its regulation. [FBrf0174573] Kearney et al., 2004, Dev. Biol. 275(2): 473--492 Gene expression profiling of the developing Drosophila CNS midline cells. [FBrf0180108]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase. Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase analysis	FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. Genomic mapping of Exelixis insertion collection. [FBrf0184340] Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]