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Gene Dmel\CG6838

General Information
Symbol	Dmel\CG6838	Species	D. melanogaster
Name		Annotation symbol	CG6838
Feature type	protein_coding_gene	FlyBase ID	FBgn0037182
Gene Model Status	Current	Stock availability	5 publicly available
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	79F6-79F6	Sequence location	3L:22,707,413..22,710,677 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG6838 (FBgn0037182). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: ARF GTPase activator activity. There is experimental evidence that it is involved in the biological process: lateral inhibition. 5 alleles are reported. The phenotype of these alleles is annotated with: chaeta. It has 4 annotated transcripts and 4 annotated polypeptides. Protein features are: Arf GTPase activating protein. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed within 00-18 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval/adult salivary gland, adult spermathecae, adult male accessory gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval trachea, adult ovary, adult testis, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1640293_s_at completely aligns to an exonic region common to each of the 4 FlyBase-annotated transcript isoforms of CG6838. Gene sequence location is 3L:22707413..22710677.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features BKN21891 HFA11794
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 79F6-79F6   Limits computationally determined from genome sequence between P{lacW}l(3)j1B10j1B10 and P{lacW}l(3)j2C4j2C4
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG6838 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG6838-RA FBtr0078539  NM_141152   2689   552 CG6838-RB FBtr0078540  NM_168955   2311   552 CG6838-RC FBtr0113186  NM_001104193   2675   552 CG6838-RD FBtr0113187  NM_001104194   2570   470
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG6838-PA   FBpp0078191   58.9   552   8.06     NP_649409   AAF51849 CG6838-PB   FBpp0078192   58.9   552   8.06     NP_730735   AAF51848 CG6838-PC   FBpp0112099   58.9   552   8.06     NP_001097663   ABW08580 CG6838-PD   FBpp0112100   49.8   470   7.20     NP_001097664   ABW08581
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Arf GTPase activating protein (IPR001164)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA264377   AA264854   AA390726   AA391220   AA438718   AA441539   AA536292   AA538903   AA539497   AA699289   AA735405   AA735554   AA803507   AA817248   AA817373   AA817481   AA820371   AA941716   AA942155   AA949613   AA949624   AA950747   AA951130   AA951649   AA978571   AA979652   AE014296 AAF51848   AE014296 AAF51849   AE014296 ABW08580   AE014296 ABW08581   AI062225   AI109243   AI133941   AI238712   AI386771   AI455405   AI456863   AI512467   AI512820   AI513143   AI514300   AI515208   AI515830   AI517990   AI518040   AI519156   AI519723   AI532187   AI544080   AI546261   AI546723   AW943878   AY069700 AAL39845   BE978241   BF495369   BF504968   BG637314   BI161557   BI161558   BI166307   BI169965   BI213050   BI230307   BI232294   BI232898   BI233231   BI235600   BI236046   BI236073   BI237295   BI237503   BI238112   BI240094   BI243474   BI354142   BI362225   BI362831   BI366461   BI368400   BI374275   BI374646   BI375937   BI481958   BI569474   BI569516   BI570283   BI578946   BI589928   BI590484   BI590503   BI590504   BI636129   CO153675   CO188576   CO189941   CO190968   CO267392   CO267511   CO277836   CO301717   CO341191   CZ471638   CZ471639   CZ479059   EC053300   EC073161   EC078751   EC083206   EC083884   EC200302   EC206452   EC206749   EC218231   EC229438   EC233664   EC235946   EC254710   EC260894   EL870838   EV587105   EV589312   GH748360   GH750183   GH753622   GH754898   GH755610   GH756188   GH756998   GH758704   GH759064   GH759250   GH759413   GH770172   GH770633   GH772518   GH773251   GH774127   GH774167   GH776489   GH776550   GH776781   GH776819   GH776964   GH777449   GH777871   GH778850   GH778926   GH781227   GH781919   GH784531   GH785838   GH788977   GH791582   GH795321   GH795376   GH796203   GH796312   GH796358   GH796978   GH797919   GH799285   GH800116   GH800257   GH800653   GH800956   GH801062   GH801900   GH801939   GH802379   GH809618   GH810729   GH811787   GH812927   GH813503   GH814077   GH814102   GH814249   GH815720   GH816621   GH816697   GH817217   GH818151   GH819292   GH821040   GH821110   GH823458   GH825489   GH826031   GH826538   GH827968   GH828122   GH828206   GH828437   GH829880   GH830120   GH830205   GH834981   GH838558   GH840427   GH840669   GH842165   GH842501   GH843095   GH843304   GH844501   GH845304   GH845327   GH845509   GH845820   GH846417   GH847155   GH847305   GH848114   GH848769   GH849433   GH849781   GH849996   GH850242   GH854070   GH859966   GH860360   GH862796   GH862846   GH865464   GH866267   GH866573   GH867127   GH867381   GH868772   GH868827   GH869409   GH870081   GH870412   GH870455   GH871339   GH872911   GH873350   GH874808   GH874899   GH875329   GH875498   GH875505   GH876261   GH876393   GH879666   GH881012   GH881351   GH882899   GH884429   GH886399   GH887234   GH887756   GH890188   GH892518   GH892987   GH893806   GH894268   GH894445   GH897928   GH898944   GH901845   GH902982   GH904149   GH904787   GH905276   GH908846   GH911245   GH912987   GH913703   GH915853   GH915937   GH919146   GH919793   GH921929   GH925057   GH929035   GH929769   GH930773   GH931901   GH933153   GH933363   GH935327   GH935807   GH935972   GH936392   GH937768   GH938446   GH938811   GH938952   GH939295   GH939560   GH939998   GH940583
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VNS2 A8JNX0
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0037182    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0037182 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed within 00-18 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0037182 expression level Developmental Stage   Expression Level embryo 00-02hr    4372 embryo 02-04hr    6661 embryo 04-06hr    5440 embryo 06-08hr    5497 embryo 08-10hr    5457 embryo 10-12hr    5336 embryo 12-14hr    4104 embryo 14-16hr    4198 embryo 16-18hr    3565 embryo 18-20hr    3057 embryo 20-22hr    3543 embryo 22-24hr    3241 larva L1    3016 larva L2    3433 larva L3 12hr old    2717 larva L3 puffstage 1-2    1984 larva L3 puffstage 3-6    2525 larva L3 puffstage 7-9    2581 white prepupae new    2674 white prepupae 12hr    1956 white prepupae 24hr    2504 pupae 2d postWPP    2152 pupae 3d postWPP    1596 pupae 4d postWPP    1477 adult male 01day    2064 adult male 05day    2494 adult male 30day    2597 adult female 01day    2464 adult female 05day    3329 adult female 30day    3505 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (4372) embryo 02-04hr  (6661) embryo 04-06hr  (5440) embryo 06-08hr  (5497) embryo 08-10hr  (5457) embryo 10-12hr  (5336) embryo 12-14hr  (4104) embryo 14-16hr  (4198) embryo 16-18hr  (3565) embryo 18-20hr  (3057) embryo 20-22hr  (3543) embryo 22-24hr  (3241) larva L1  (3016) larva L2  (3433) larva L3 12hr old  (2717) larva L3 puffstage 1-2  (1984) larva L3 puffstage 3-6  (2525) larva L3 puffstage 7-9  (2581) white prepupae new  (2674) white prepupae 12hr  (1956) white prepupae 24hr  (2504) pupae 2d postWPP  (2152) pupae 3d postWPP  (1596) pupae 4d postWPP  (1477) adult male 01day  (2064) adult male 05day  (2494) adult male 30day  (2597) adult female 01day  (2464) adult female 05day  (3329) adult female 30day  (3505) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (4372) embryo 02-04hr  (6661) embryo 04-06hr  (5440) embryo 06-08hr  (5497) embryo 08-10hr  (5457) embryo 10-12hr  (5336) embryo 12-14hr  (4104) embryo 14-16hr  (4198) embryo 16-18hr  (3565) embryo 18-20hr  (3057) embryo 20-22hr  (3543) embryo 22-24hr  (3241) larva L1  (3016) larva L2  (3433) larva L3 12hr old  (2717) larva L3 puffstage 1-2  (1984) larva L3 puffstage 3-6  (2525) larva L3 puffstage 7-9  (2581) white prepupae new  (2674) white prepupae 12hr  (1956) white prepupae 24hr  (2504) pupae 2d postWPP  (2152) pupae 3d postWPP  (1596) pupae 4d postWPP  1477 adult male 01day  (2064) adult male 05day  (2494) adult male 30day  (2597) adult female 01day  (2464) adult female 05day  (3329) adult female 30day  (3505) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    4372 embryo 02-04hr    6661 embryo 04-06hr    5440 embryo 06-08hr    5497 embryo 08-10hr    5457 embryo 10-12hr    5336 embryo 12-14hr    4104 embryo 14-16hr    4198 embryo 16-18hr    3565 embryo 18-20hr    3057 embryo 20-22hr    3543 embryo 22-24hr    3241 larva L1    3016 larva L2    3433 larva L3 12hr old    2717 larva L3 puffstage 1-2    1984 larva L3 puffstage 3-6    2525 larva L3 puffstage 7-9    2581 white prepupae new    2674 white prepupae 12hr    1956 white prepupae 24hr    2504 pupae 2d postWPP    2152 pupae 3d postWPP    1596 pupae 4d postWPP    1477 adult male 01day    2064 adult male 05day    2494 adult male 30day    2597 adult female 01day    2464 adult female 05day    3329 adult female 30day    3505 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    4372 embryo 02-04hr    6661 embryo 04-06hr    5440 embryo 06-08hr    5497 embryo 08-10hr    5457 embryo 10-12hr    5336 embryo 12-14hr    4104 embryo 14-16hr    4198 embryo 16-18hr    3565 embryo 18-20hr    3057 embryo 20-22hr    3543 embryo 22-24hr    3241 larva L1    3016 larva L2    3433 larva L3 12hr old    2717 larva L3 puffstage 1-2    1984 larva L3 puffstage 3-6    2525 larva L3 puffstage 7-9    2581 white prepupae new    2674 white prepupae 12hr    1956 white prepupae 24hr    2504 pupae 2d postWPP    2152 pupae 3d postWPP    1596 pupae 4d postWPP    1477 adult male 01day    2064 adult male 05day    2494 adult male 30day    2597 adult female 01day    2464 adult female 05day    3329 adult female 30day    3505 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0037182 expression level Developmental Stage   Expression Level embryo 00-02hr    4372 embryo 02-04hr    6661 embryo 04-06hr    5440 embryo 06-08hr    5497 embryo 08-10hr    5457 embryo 10-12hr    5336 embryo 12-14hr    4104 embryo 14-16hr    4198 embryo 16-18hr    3565 embryo 18-20hr    3057 embryo 20-22hr    3543 embryo 22-24hr    3241 larva L1    3016 larva L2    3433 larva L3 12hr old    2717 larva L3 puffstage 1-2    1984 larva L3 puffstage 3-6    2525 larva L3 puffstage 7-9    2581 white prepupae new    2674 white prepupae 12hr    1956 white prepupae 24hr    2504 pupae 2d postWPP    2152 pupae 3d postWPP    1596 pupae 4d postWPP    1477 adult male 01day    2064 adult male 05day    2494 adult male 30day    2597 adult female 01day    2464 adult female 05day    3329 adult female 30day    3505 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (4372) embryo 02-04hr  (6661) embryo 04-06hr  (5440) embryo 06-08hr  (5497) embryo 08-10hr  (5457) embryo 10-12hr  (5336) embryo 12-14hr  (4104) embryo 14-16hr  (4198) embryo 16-18hr  (3565) embryo 18-20hr  (3057) embryo 20-22hr  (3543) embryo 22-24hr  (3241) larva L1  (3016) larva L2  (3433) larva L3 12hr old  (2717) larva L3 puffstage 1-2  (1984) larva L3 puffstage 3-6  (2525) larva L3 puffstage 7-9  (2581) white prepupae new  (2674) white prepupae 12hr  (1956) white prepupae 24hr  (2504) pupae 2d postWPP  (2152) pupae 3d postWPP  (1596) pupae 4d postWPP  (1477) adult male 01day  (2064) adult male 05day  (2494) adult male 30day  (2597) adult female 01day  (2464) adult female 05day  (3329) adult female 30day  (3505) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (4372) embryo 02-04hr  (6661) embryo 04-06hr  (5440) embryo 06-08hr  (5497) embryo 08-10hr  (5457) embryo 10-12hr  (5336) embryo 12-14hr  (4104) embryo 14-16hr  (4198) embryo 16-18hr  (3565) embryo 18-20hr  (3057) embryo 20-22hr  (3543) embryo 22-24hr  (3241) larva L1  (3016) larva L2  (3433) larva L3 12hr old  (2717) larva L3 puffstage 1-2  1984 larva L3 puffstage 3-6  (2525) larva L3 puffstage 7-9  (2581) white prepupae new  (2674) white prepupae 12hr  1956 white prepupae 24hr  (2504) pupae 2d postWPP  2152 pupae 3d postWPP  1596 pupae 4d postWPP  1477 adult male 01day  2064 adult male 05day  (2494) adult male 30day  (2597) adult female 01day  2464 adult female 05day  (3329) adult female 30day  (3505) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    4372 embryo 02-04hr    6661 embryo 04-06hr    5440 embryo 06-08hr    5497 embryo 08-10hr    5457 embryo 10-12hr    5336 embryo 12-14hr    4104 embryo 14-16hr    4198 embryo 16-18hr    3565 embryo 18-20hr    3057 embryo 20-22hr    3543 embryo 22-24hr    3241 larva L1    3016 larva L2    3433 larva L3 12hr old    2717 larva L3 puffstage 1-2    1984 larva L3 puffstage 3-6    2525 larva L3 puffstage 7-9    2581 white prepupae new    2674 white prepupae 12hr    1956 white prepupae 24hr    2504 pupae 2d postWPP    2152 pupae 3d postWPP    1596 pupae 4d postWPP    1477 adult male 01day    2064 adult male 05day    2494 adult male 30day    2597 adult female 01day    2464 adult female 05day    3329 adult female 30day    3505 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    4372 embryo 02-04hr    6661 embryo 04-06hr    5440 embryo 06-08hr    5497 embryo 08-10hr    5457 embryo 10-12hr    5336 embryo 12-14hr    4104 embryo 14-16hr    4198 embryo 16-18hr    3565 embryo 18-20hr    3057 embryo 20-22hr    3543 embryo 22-24hr    3241 larva L1    3016 larva L2    3433 larva L3 12hr old    2717 larva L3 puffstage 1-2    1984 larva L3 puffstage 3-6    2525 larva L3 puffstage 7-9    2581 white prepupae new    2674 white prepupae 12hr    1956 white prepupae 24hr    2504 pupae 2d postWPP    2152 pupae 3d postWPP    1596 pupae 4d postWPP    1477 adult male 01day    2064 adult male 05day    2494 adult male 30day    2597 adult female 01day    2464 adult female 05day    3329 adult female 30day    3505 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0037182    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0037182 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval/adult salivary gland, adult spermathecae, adult male accessory gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval trachea, adult ovary, adult testis, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0037182 expression level Tissue   Expression Level Larval Central Nervous System    310.775 Larval Midgut    299.4 Larval Hindgut    349.3 Larval Malpighian Tubules    260.9 Larval Fat Body    262.5 Larval Salivary Gland    1905.3 Larval Trachea    449.075 Larval Carcass    394.45 Adult Head    189.5 Adult Eye    217.9 Adult Brain    175.8 Adult Thoracic-Abdominal Ganglion    155.2 Adult Crop    250.6 Adult Midgut    298.5 Adult Hindgut    206.8 Adult Malpighian Tubules    231 Adult Fat Body    362.3 Adult Salivary Gland    1134 Adult Heart    241.15 Adult VirginFemale Spermatheca    575.4 Adult InseminatedFemale Spermatheca    630.9 Adult Ovary    306.1 Adult Testis    135.7 Adult Male Accessory Gland    1294.6 Adult Carcass    209.6 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    310.775 Larval Midgut    299.4 Larval Hindgut    349.3 Larval Malpighian Tubules    260.9 Larval Fat Body    262.5 Larval Salivary Gland  (1905.3) Larval Trachea    449.075 Larval Carcass    394.45 Adult Head    189.5 Adult Eye    217.9 Adult Brain    175.8 Adult Thoracic-Abdominal Ganglion    155.2 Adult Crop    250.6 Adult Midgut    298.5 Adult Hindgut    206.8 Adult Malpighian Tubules    231 Adult Fat Body    362.3 Adult Salivary Gland  (1134) Adult Heart    241.15 Adult VirginFemale Spermatheca  (575.4) Adult InseminatedFemale Spermatheca  (630.9) Adult Ovary    306.1 Adult Testis    135.7 Adult Male Accessory Gland  (1294.6) Adult Carcass    209.6 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    310.775 Larval Midgut    299.4 Larval Hindgut    349.3 Larval Malpighian Tubules    260.9 Larval Fat Body    262.5 Larval Salivary Gland  (1905.3) Larval Trachea    449.075 Larval Carcass    394.45 Adult Head    189.5 Adult Eye    217.9 Adult Brain    175.8 Adult Thoracic-Abdominal Ganglion    155.2 Adult Crop    250.6 Adult Midgut    298.5 Adult Hindgut    206.8 Adult Malpighian Tubules    231 Adult Fat Body    362.3 Adult Salivary Gland  (1134) Adult Heart    241.15 Adult VirginFemale Spermatheca    575.4 Adult InseminatedFemale Spermatheca    630.9 Adult Ovary    306.1 Adult Testis    135.7 Adult Male Accessory Gland  (1294.6) Adult Carcass    209.6 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    310.775 Larval Midgut    299.4 Larval Hindgut    349.3 Larval Malpighian Tubules    260.9 Larval Fat Body    262.5 Larval Salivary Gland    1905.3 Larval Trachea    449.075 Larval Carcass    394.45 Adult Head    189.5 Adult Eye    217.9 Adult Brain    175.8 Adult Thoracic-Abdominal Ganglion    155.2 Adult Crop    250.6 Adult Midgut    298.5 Adult Hindgut    206.8 Adult Malpighian Tubules    231 Adult Fat Body    362.3 Adult Salivary Gland    1134 Adult Heart    241.15 Adult VirginFemale Spermatheca    575.4 Adult InseminatedFemale Spermatheca    630.9 Adult Ovary    306.1 Adult Testis    135.7 Adult Male Accessory Gland    1294.6 Adult Carcass    209.6 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0037182 expression level Tissue   Expression Level Larval Central Nervous System    310.775 Larval Midgut    299.4 Larval Hindgut    349.3 Larval Malpighian Tubules    260.9 Larval Fat Body    262.5 Larval Salivary Gland    1905.3 Larval Trachea    449.075 Larval Carcass    394.45 Adult Head    189.5 Adult Eye    217.9 Adult Brain    175.8 Adult Thoracic-Abdominal Ganglion    155.2 Adult Crop    250.6 Adult Midgut    298.5 Adult Hindgut    206.8 Adult Malpighian Tubules    231 Adult Fat Body    362.3 Adult Salivary Gland    1134 Adult Heart    241.15 Adult VirginFemale Spermatheca    575.4 Adult InseminatedFemale Spermatheca    630.9 Adult Ovary    306.1 Adult Testis    135.7 Adult Male Accessory Gland    1294.6 Adult Carcass    209.6 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    310.775 Larval Midgut    299.4 Larval Hindgut    349.3 Larval Malpighian Tubules    260.9 Larval Fat Body    262.5 Larval Salivary Gland  (1905.3) Larval Trachea    449.075 Larval Carcass    394.45 Adult Head    189.5 Adult Eye    217.9 Adult Brain    175.8 Adult Thoracic-Abdominal Ganglion    155.2 Adult Crop    250.6 Adult Midgut    298.5 Adult Hindgut    206.8 Adult Malpighian Tubules    231 Adult Fat Body    362.3 Adult Salivary Gland  (1134) Adult Heart    241.15 Adult VirginFemale Spermatheca  575.4 Adult InseminatedFemale Spermatheca  630.9 Adult Ovary    306.1 Adult Testis    135.7 Adult Male Accessory Gland  (1294.6) Adult Carcass    209.6 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    310.775 Larval Midgut    299.4 Larval Hindgut    349.3 Larval Malpighian Tubules    260.9 Larval Fat Body    262.5 Larval Salivary Gland  (1905.3) Larval Trachea    449.075 Larval Carcass    394.45 Adult Head    189.5 Adult Eye    217.9 Adult Brain    175.8 Adult Thoracic-Abdominal Ganglion    155.2 Adult Crop    250.6 Adult Midgut    298.5 Adult Hindgut    206.8 Adult Malpighian Tubules    231 Adult Fat Body    362.3 Adult Salivary Gland  1134 Adult Heart    241.15 Adult VirginFemale Spermatheca    575.4 Adult InseminatedFemale Spermatheca    630.9 Adult Ovary    306.1 Adult Testis    135.7 Adult Male Accessory Gland  1294.6 Adult Carcass    209.6 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    310.775 Larval Midgut    299.4 Larval Hindgut    349.3 Larval Malpighian Tubules    260.9 Larval Fat Body    262.5 Larval Salivary Gland    1905.3 Larval Trachea    449.075 Larval Carcass    394.45 Adult Head    189.5 Adult Eye    217.9 Adult Brain    175.8 Adult Thoracic-Abdominal Ganglion    155.2 Adult Crop    250.6 Adult Midgut    298.5 Adult Hindgut    206.8 Adult Malpighian Tubules    231 Adult Fat Body    362.3 Adult Salivary Gland    1134 Adult Heart    241.15 Adult VirginFemale Spermatheca    575.4 Adult InseminatedFemale Spermatheca    630.9 Adult Ovary    306.1 Adult Testis    135.7 Adult Male Accessory Gland    1294.6 Adult Carcass    209.6 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    189.5   NA  Eye    217.9   NA  Brain    175.8   310.775  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    155.2   NA  Crop    250.6   299.4  Midgut    298.5   349.3  Hindgut    206.8   260.9  Malpighian Tubules    231   262.5  Fat Body    362.3   1905.3  Salivary Gland    1134   NA  Heart    241.15   449.075  Trachea    NA   NA  VirginFemale Spermatheca    575.4   NA  InseminatedFemale Spermatheca    630.9   NA  Ovary    306.1   NA  Testis    135.7   NA  Male Accessory Gland    1294.6   394.45  Carcass    209.6 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_08
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037182 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6838-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG6838 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG6838GD12053 Other Phenotypes Allele visible, with Scer\GAL4pnr-MD237 CG6838GD12053 Phenotype manifest in Allele chaeta, with Scer\GAL4pnr-MD237 CG6838GD12053
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of CG6838 Class Mutagen Stocks Known lesion CG6838d00510 P-element activity 1 -- CG6838e01250 piggyBac transposase 1 -- CG6838G5565 P-element activity 1 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG6838 Class Mutagen Stocks Known lesion CG6838GD12053 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG6838JF01649 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD12053} NA P{TRiP.JF01649} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EP}CG6838G5565 NA P{XP}CG6838d00510 NA miscellaneous insertions P{SUPor-P}CG32452KG07046b NA PBac{RB}CG6838e01250 NA
Gene Ontology: Function, Process & Cellular Component ( 4 unique terms )
Terms Based on Experimental Evidence ( 1 term )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
lateral inhibition inferred from mutant phenotype (Mummery-Widmer et al., 2009)
Cellular Component ( 0 terms)
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
ARF GTPase activator activity inferred from sequence or structural similarity with Saccharomyces GLO3 (FlyBase, 1992-) zinc ion binding inferred from electronic annotation with InterPro:IPR001164 (FlyBase Curators et al., 2004-)
Biological Process
CV term Evidence References
regulation of ARF GTPase activity inferred from electronic annotation with InterPro:IPR001164 (FlyBase Curators et al., 2004-)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG6838 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 65721 DroID - A comprehensive database of gene and protein interactions. • FBgn0037182 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 40487
Orthologs
Genome-wide drosophilid orthologs	Dana\GF23451 Dere\GG13175 Dgri\GH14809 Dmoj\GI13910 Dper\GL18121 Dpse\GA19895 Dsec\GM22084 Dsim\GD12059 Dvir\GJ13704 Dwil\GK17446 Dyak\GE19496
Curated drosophilid orthologs	Dpse\GA19895
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL014220-PA Aedes aegypti (mosquito) AGAP005609-PA Anopheles gambiae (mosquito) XP_393119.3 Apis mellifera (honey bee) XP_001945511.1 Acyrthosiphon pisum (pea aphid) At4g17890.1 Arabidopsis thaliana (wall cress) At5g46750.1 Arabidopsis thaliana (wall cress) 36110 Batrachochytrium dendrobatidis (chytrid fungus) 108020 Branchiostoma floridae (lancelet) XP_001893637.1 Brugia malayi (roundworm nematode) BGIBMGA009496-PA Bombyx mori (silk worm) ENSBTAP00000012592 Bos taurus (bovine) CAL0005263 Candida albicans (a form of yeast) CN07703 Caenorhabditis brenneri (small nematode) CBP34261 Caenorhabditis briggsae (nematode) CE29955 Caenorhabditis elegans (worm) ENSCAFP00000001350 Canis familiaris (dog) CAGL0G03707g Candida glabrata (haploid yeast) ENSCINP00000010681 Ciona intestinalis (sea squirt) JA04463 Caenorhabditis japonica (nematode) cn09364 Cryptococcus neoformans (yeast-like fungus) CPIJ002306 Culex pipens (mosquito) ENSCPOP00000012019 Cavia porcellus (guinea pig) RP31871 Caenorhabditis remanei (nematode) 181150 Capitella spl (polychaete worm) DDB0233658 Dictyostelium discoideum (amoeba) DEHA2C05940g Debaryomyces Hansenii (yeast) 300346 Daphnia pulex (daphnia) ENSDARP00000088098 Danio rerio (zebra fish) ENSECAP00000022333 Equus caballus (horse) ENSGACP00000022802 Gymnopilus aculeatus (mushroom) ENSGALP00000036552 Gallus gallus (chicken) 188195 Hypsipyla robusta (cedar shoot borer) ENSP00000263245 Homo sapiens (human) ISCW018290-PA Ixodes scapularis (deer tick) KLLA0E06799g Kluyveromyces lactis (yeast) 108053 Lottia gigantea (owl limpet) LmjF13.0710 Leishmania major (virus) 37355 Monocosta brevicollis (choanoflagellate) ENSMODP00000024829 Monodelphis domestica (gray opossum) ENSMMUP00000002978 Macaca mulatta (rhesus monkey) ENSMUSP00000028691 Mus musculus (house mouse) 235005 Nematostella vectensis (starlet anemone) XP_001602990.1 Nasonia vitripennis (wasp) ENSOANP00000006481 Ornithorynchus anatinus (platypus) ENSORLP00000024393 Oryzias latipes (japanese killifish) LOC_Os10g42420.1 Oryza sativa (asian rice) PF08_0120 Plasmodium falciparum (protozoal parasite) PHUM003737-PA Pediculus humanus (human body louse) ENSPPYP00000003801 Pongo pygmaeus (orangutan) 73939 Phytophthora ramorum (sudden oak death pathogen) 590013 Populus trichocarpa (black cottonwood) 836924 Populus trichocarpa (black cottonwood) ENSPTRP00000006176 Pan troglodytes (chimpanzee) PVX_093515 Plasmodium vivax (protozoal parasite) ENSRNOP00000042671 Rattus norvegicus (norway rat) 4743293 Sorghum bicolor (sorghum) YER122C Saccharomyces cerevisiae (budding yeast) SPAC22E12.17c Schizosaccharomyces pombe (fission yeast) XP_001191702.1 Strongylocentrotus purpuratus (purple sea urchin) 64381 Trichoplax adhaerens (metazoa) XP_974659.1 Tribolium castaneum (red flour beetle) ENSTNIP00000007412 Tetraodon nigroviridis (green spotted pufferfish) TP01_1104 Theileria parva (parasitic protozoan) 20719 Thalassiosira pseudonana (marine diatom) ENSTRUP00000020134 Takifugu rubripes (pufferfish Takifugu) 3829.m01222 Tetrahymena thermophila (ciliate protozoa) 91931.m00032 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000011114 Xenopus tropicalis (frog) YALI0D00693g Yarrowia lipolytica (nonconventional yeast) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB12209 NV15551 LH11479 ISCW018290 FBgn0236837 FBgn0219445 FBgn0200925 FBgn0183798 FBgn0176955 JGI_V11_300346 FBgn0079891 FBgn0155724 FBgn0136664 FBgn0122285 FBgn0105447 FBgn0100445 CPIJ002305 BGIBMGA009496 ACYPI010200 GB13220 AAEL001277 PHUM261620 GLEAN_07817
Stocks & Reagents
Stocks Listed in FlyBase ( 5 )
Bloomington	31156 y1 v1; P{TRiP.JF01649}attP2 27183 y1 w*; P{EP}CG6838G5565 P{EP}SPoCkG5565
Harvard	- P{XP}CG6838d00510 - PBac{RB}CG6838e01250
VDRC	v35123 w1118; P{GD12053}v35123
Genomic Clones ( 1 )
	BACR22O21 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 282 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD46935
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT04204 AT07120 GH01362 GH08374 GH11227 GH14811 GH16979 GM13342 GM26534 HL08095 LD08093 LD08805 LD09589 LD10415 LD13056 LD16514 LD16821 LD17656 LD18556 LD21254 LD21505 LD22448 LD22638 LD22979 LD26220 LD27083 LD29571 LD29583 LD30857 LD31259 LD31440 LD32289 LD34356 LD36225 LD37018 LD37364 LD37444 LD38621 LD39424 LD41511 LD44351 LD44880 LD45333 LD46309 LD47788 RE06387 RE08990 RE11288 RE18361 RE28340 RE29055 RE29526 RE31485 RE32035 RE32067 RE33503 RE33742 RE34493 RE36742 RE41128 RE46734 RE47503 RE52016 RE54365 RE61827 RE62286 RE63844 RE64588 RE72896 RH01548 RH01607 RH02579 RH03453 RH04111 RH04134 SD03588 SD10490 SD15254 SD17706
Other clones	5931 30817 37904 38102 58949 76997 183057 214247.57 522685 bs75g12 CK01.30D.H8 CK01.30D.H12 CK01.49A.E3 CK01.56C.E11 Dmel_neb_008983_0119_1020 Dmel_neb_009598_0359_3285 EC053300 EK041018 EK045715 EK050301 EK126958 EK150020 EK150631 EK181947 EN02550 EP12021 IP02937 LD23952 RE01046 RH04135 RP003017247 RP003026757 RP003031746 RP003055698 RP003063039 RP003075265 RP003080957 RP003084536 RP003085226 RP003092587 RP003093247 RP003095440 RP003097121 RP003108679 RP003127515 RP003129306 RP003130137 RP003135160 RP003140986 RP003141375 RP003143149 RP003144703 RP003145860 RP003162859 RP003178880 RP003179107 RP003181362 RP003182501 RP003185145 RP003186602 RP003189556 RP003195311 RP003195868 RP003203613 RP003206618 RP003208008 RP003208671 RP003209342 RP003210207 RP003210475 RP003214579 RP003215309 RP003216558 RP003220559 RP003221648 RP003223027 RP003223102 RP003228694 RP003228862 RP003240492 RP003241843 RP003242594 RP003242824 RP003244116 RP003245676 RP003246615 RP003247673 RP003248136 RP003250838 RP003259433 RP003259709 RP003264638 RP003265076 RP003268307 RP003269080 RP003271449 RP003280011 RP003282272 RP003291177 RP003296064 RP003298306 RP003301388 RP003305622 RP003308194 RP003309479 RP003313316 RP003313699 RP003315187 RP003316716 RP003317073 RP003321621 RP003329782 RP003330836 RP003332141 RP003332664 RP003334560 RP003335433 RP003335572 RP003337120 RP003340067 RP003344628 RP003349773 RP003352522 RP003353324 RP003373419 RP003393576 RP003401321 RP003409116 RP003416273 RP003417036 RP003431485 RP003431780 RP003442398 RP003442540 RP003452557 RP003454168 RP003461485 RP003462997 RP003477551 RP003488515 RP003493198 RP003497446 RP003498255 RP003506938 RP003514797 RP003519198 RP003526698 RP003530378 RP003534201 RP003535965 RP003539296 RP003546284 RP003547496 RP003552483 RP003559476 RP003568762 RP003570341 RP003571553 RP003572162 RP003572240 RP003572621 RP003575743 RP003577341 RP003580090 RP003585281 RP003587254 RP003587576 RP003592012 RP003594395 RP003596847 RP003607073 RP003607174 RP003608503 RP003612077 RP003612651 RP003613704 RP003619597 RP003622126 RP003623758 RP003625476 RP003627029 RP003628228 RP003630470 RP003632261 RP003634126 RP003634640 RP003635057 RP003637320 RP003638763 RP003640676 RP003644706 RP003647517 RP003650869 RP003654821 RP003655122 RP003655349 RP003656977 RP003659901 RP003670258 RP003671089 RP003673577 RP003679896
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0037182 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 40487
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_141152 NM_168955 NM_001104193 NM_001104194 RefSeq (Proteins) • NP_649409 NP_730735 NP_001097663 NP_001097664 DDBJ / EMBL / GenBank • AAF51848 AAF51849 AAL39845 ABW08580 ABW08581 AI515208 AW943878 AY069700 CZ471638 CZ471639 CZ479059 Entrez Gene - A searchable database of RefSeq genes. • 40487 UniProtKB/TrEMBL • A8JNX0 Q9VNS2
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Arf GTPase activating protein (IPR001164)
Linkouts
	BioGRID - A database of protein and genetic interactions • 65721 DroID - A comprehensive database of gene and protein interactions. • FBgn0037182 DRSC - Results from RNAi screens. • FBgn0037182 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037182 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6838-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0037182 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 40487 InParanoid A subset of ortholog calls from InParanoid. • AAEL014220-PA Aedes aegypti (mosquito) AGAP005609-PA Anopheles gambiae (mosquito) XP_393119.3 Apis mellifera (honey bee) XP_001945511.1 Acyrthosiphon pisum (pea aphid) At4g17890.1 Arabidopsis thaliana (wall cress) At5g46750.1 Arabidopsis thaliana (wall cress) 36110 Batrachochytrium dendrobatidis (chytrid fungus) 108020 Branchiostoma floridae (lancelet) XP_001893637.1 Brugia malayi (roundworm nematode) BGIBMGA009496-PA Bombyx mori (silk worm) ENSBTAP00000012592 Bos taurus (bovine) CAL0005263 Candida albicans (a form of yeast) CN07703 Caenorhabditis brenneri (small nematode) CBP34261 Caenorhabditis briggsae (nematode) CE29955 Caenorhabditis elegans (worm) ENSCAFP00000001350 Canis familiaris (dog) CAGL0G03707g Candida glabrata (haploid yeast) ENSCINP00000010681 Ciona intestinalis (sea squirt) JA04463 Caenorhabditis japonica (nematode) cn09364 Cryptococcus neoformans (yeast-like fungus) CPIJ002306 Culex pipens (mosquito) ENSCPOP00000012019 Cavia porcellus (guinea pig) RP31871 Caenorhabditis remanei (nematode) 181150 Capitella spl (polychaete worm) DDB0233658 Dictyostelium discoideum (amoeba) DEHA2C05940g Debaryomyces Hansenii (yeast) 300346 Daphnia pulex (daphnia) ENSDARP00000088098 Danio rerio (zebra fish) ENSECAP00000022333 Equus caballus (horse) ENSGACP00000022802 Gymnopilus aculeatus (mushroom) ENSGALP00000036552 Gallus gallus (chicken) 188195 Hypsipyla robusta (cedar shoot borer) ENSP00000263245 Homo sapiens (human) ISCW018290-PA Ixodes scapularis (deer tick) KLLA0E06799g Kluyveromyces lactis (yeast) 108053 Lottia gigantea (owl limpet) LmjF13.0710 Leishmania major (virus) 37355 Monocosta brevicollis (choanoflagellate) ENSMODP00000024829 Monodelphis domestica (gray opossum) ENSMMUP00000002978 Macaca mulatta (rhesus monkey) ENSMUSP00000028691 Mus musculus (house mouse) 235005 Nematostella vectensis (starlet anemone) XP_001602990.1 Nasonia vitripennis (wasp) ENSOANP00000006481 Ornithorynchus anatinus (platypus) ENSORLP00000024393 Oryzias latipes (japanese killifish) LOC_Os10g42420.1 Oryza sativa (asian rice) PF08_0120 Plasmodium falciparum (protozoal parasite) PHUM003737-PA Pediculus humanus (human body louse) ENSPPYP00000003801 Pongo pygmaeus (orangutan) 73939 Phytophthora ramorum (sudden oak death pathogen) 590013 Populus trichocarpa (black cottonwood) 836924 Populus trichocarpa (black cottonwood) ENSPTRP00000006176 Pan troglodytes (chimpanzee) PVX_093515 Plasmodium vivax (protozoal parasite) ENSRNOP00000042671 Rattus norvegicus (norway rat) 4743293 Sorghum bicolor (sorghum) YER122C Saccharomyces cerevisiae (budding yeast) SPAC22E12.17c Schizosaccharomyces pombe (fission yeast) XP_001191702.1 Strongylocentrotus purpuratus (purple sea urchin) 64381 Trichoplax adhaerens (metazoa) XP_974659.1 Tribolium castaneum (red flour beetle) ENSTNIP00000007412 Tetraodon nigroviridis (green spotted pufferfish) TP01_1104 Theileria parva (parasitic protozoan) 20719 Thalassiosira pseudonana (marine diatom) ENSTRUP00000020134 Takifugu rubripes (pufferfish Takifugu) 3829.m01222 Tetrahymena thermophila (ciliate protozoa) 91931.m00032 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000011114 Xenopus tropicalis (frog) YALI0D00693g Yarrowia lipolytica (nonconventional yeast) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 40487 modMine - Data generated by the modENCODE project. • FBgn0037182 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB12209 NV15551 LH11479 ISCW018290 FBgn0236837 FBgn0219445 FBgn0200925 FBgn0183798 FBgn0176955 JGI_V11_300346 FBgn0079891 FBgn0155724 FBgn0136664 FBgn0122285 FBgn0105447 FBgn0100445 CPIJ002305 BGIBMGA009496 ACYPI010200 GB13220 AAEL001277 PHUM261620 GLEAN_07817
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	arfgap1 (Gupta et al., 2009) CG6838 (Bakal et al., 2007, Gupta et al., 2009, Ni et al., 2008)
Name Synonym
Secondary FlyBase IDs
References ( 17 )
Research paper	Gupta et al., 2009, PLoS ONE 4(8): e6768 Analysis of endocytic pathways in Drosophila cells reveals a conserved role for GBF1 in internalization via GEECs. [FBrf0208539] Ni et al., 2008, Nature Methods 5(1): 49--51 Vector and parameters for targeted transgenic RNA interference in Drosophila melanogaster. [FBrf0200406]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Bakal et al., 2007, Science 316(5832): Supporting online material. [FBrf0204776] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Review	Bernards, 2003, Biochim. biophys. Acta 1603(2): 47--82 GAPs galore! A survey of putative Ras superfamily GTPase activating proteins in man and Drosophila. [FBrf0158741]
Personal communication to FlyBase	Bellen, 2009.4.8, BDGP_2009_0408.GenExel.xml BDGP_2009_0408.GenExel.xml [FBrf0207636] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
FlyBase analysis	FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. Genomic mapping of Exelixis insertion collection. [FBrf0184340] Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]
Curated genome annotation	Kodira, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126678]