FB2019_05, released Oct 15, 2019

Gene: Dmel\Mes2

Open Close
General Information
Symbol
Dmel\Mes2
Species
D. melanogaster
Name
Mesoderm-expressed 2
Annotation Symbol
CG11100
Feature Type
protein_coding_gene
FlyBase ID
FBgn0037207
Gene Model Status
Current
Stock Availability
11 publicly available
Gene Snapshot
Mesoderm-expressed 2 (Mes2) encodes a transcription regulator involved in ecdysis. [Date last reviewed: 2019-09-12]
Other Summaries
Also Known As
adfR
Key Links
Genomic Location
Cytogenetic map
80C1-80C1
Sequence location
3L:22,945,657..22,952,248 [+]
Recombination map
3-47
Sequence
Get Decorated FASTA
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
NCBI
UCSC
Ensembl
PopFly
Function
GO Summary Ribbons
Gene Group (FlyBase)
Protein Family (UniProt)
-
Protein Signatures (InterPro)
Molecular Function (GO)
[Detailed GO annotations]
Experimental Evidence
-
Predictions / Assertions
-
Summaries
Gene Group (FlyBase)
MADF-BESS DOMAIN TRANSCRIPTION REGULATORS -
The MADF-BESS domain transcription regulators include a variety of activators and corepressors and chromatin modifying proteins. BESS domains are often present in combination with MADF domains. The BESS domain mediates protein-protein interactions. (Adapted from FBrf0155780 and FBrf0224045).
Gene Model and Products
Number of Transcripts
2
Number of Unique Polypeptides
2

Please see the GBrowse view of Dmel\Mes2 or the JBrowse view of Dmel\Mes2 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Comments on Gene Model
Gene model reviewed during 5.50
Sequence Ontology: Class of Gene
nuclear_gene
protein_coding_gene
Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
Mes2-RB
FBtr0078561
NM_168979
2302
437
Mes2-RC
FBtr0078563
NM_168980
2208
372
Additional Transcript Data and Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank
Mes2-PB
FBpp0078212
48.0
437
6.20
NP_730768
AAF51886
Mes2-PC
FBpp0078214
41.1
372
5.27
NP_730769
AAN12211
Polypeptides with Identical Sequences

None of the polypeptides share 100% sequence identity.

Additional Polypeptide Data and Comments
Reported size (kDa)
Comments
External Data
Crossreferences
InterPro - A database of protein families, domains and functional sites
Linkouts
Sequences Consistent with the Gene Model
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Mes2 using the Feature Mapper tool.

External Data
Crossreferences
Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
Linkouts
Gene Ontology (4 terms)
Molecular Function (0 terms)
There is no information supporting a Molecular Function term for this gene. (Based on a review of available data before: 2006-08-03 )
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (0 terms)
Biological Process (2 terms)
Terms Based on Experimental Evidence (2 terms)
CV Term
Evidence
References
ecdysis, chitin-based cuticle
inferred from mutant phenotype
(Zimmermann et al., 2006)
instar larval development
inferred from mutant phenotype
(Zimmermann et al., 2006)
Terms Based on Predictions or Assertions (0 terms)
Cellular Component (2 terms)
Terms Based on Experimental Evidence (1 term)
CV Term
Evidence
References
nucleus
inferred from direct assay
(Zimmermann et al., 2006)
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
nucleus
inferred from biological aspect of ancestor with PANTHER:PTN000956409
(assigned by GO_Central )
(Gaudet et al., 2011)
transcription factor complex
inferred from biological aspect of ancestor with PANTHER:PTN000956409
(assigned by GO_Central )
(Gaudet et al., 2011)
Expression Data
Expression Summary Ribbons
Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.
For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.
Transcript Expression
expression microarray
Stage
Tissue/Position (including subcellular localization)
Reference
embryonic stage 5 -- 6
mesectoderm | subset
(Kearney et al., 2004)
embryonic stage 7 -- 8
mesectoderm anlage | subset
(Kearney et al., 2004)
embryonic stage 9 -- 12
midline primordium | subset
(Kearney et al., 2004)
embryonic stage 13 -- 16
dorsal median cell
(Kearney et al., 2004)
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
embryonic stage 1 -- 3
organism

Comment: maternally deposited

(Fisher et al., 2012)
embryonic stage 4 -- 6
anterior endoderm anlage

Comment: anlage in statu nascendi

(Fisher et al., 2012)
endoderm anlage

Comment: anlage in statu nascendi

(Fisher et al., 2012)
foregut anlage in statu nascendi
(Fisher et al., 2012)
head mesoderm anlage

Comment: anlage in statu nascendi

(Fisher et al., 2012)
mesoderm anlage

Comment: anlage in statu nascendi

(Fisher et al., 2012)
organism | faint | ubiquitous
(Fisher et al., 2012)
posterior ectoderm anlage

Comment: anlage in statu nascendi

(Fisher et al., 2012)
trunk mesoderm anlage

Comment: anlage in statu nascendi

(Fisher et al., 2012)
embryonic stage 5
mesoderm anlage
(Stathopoulos et al., 2002)
embryonic stage 7 -- 8
antennal anlage

Comment: reported as procephalic ectoderm anlage

(Fisher et al., 2012)
central brain anlage

Comment: reported as procephalic ectoderm anlage

(Fisher et al., 2012)
dorsal head epidermis anlage

Comment: reported as procephalic ectoderm anlage

(Fisher et al., 2012)
visual anlage

Comment: reported as procephalic ectoderm anlage

(Fisher et al., 2012)
anterior endoderm anlage
(Fisher et al., 2012)
foregut anlage
(Fisher et al., 2012)
head mesoderm
(Fisher et al., 2012)
mesectoderm
(Fisher et al., 2012)
organism | faint | ubiquitous
(Fisher et al., 2012)
posterior endoderm
(Fisher et al., 2012)
trunk mesoderm
(Fisher et al., 2012)
ventral ectoderm
(Fisher et al., 2012)
embryonic stage 9 -- 10
amnioserosa
(Fisher et al., 2012)
antennal primordium

Comment: reported as procephalic ectoderm primordium

(Fisher et al., 2012)
central brain primordium

Comment: reported as procephalic ectoderm primordium

(Fisher et al., 2012)
visual primordium

Comment: reported as procephalic ectoderm primordium

(Fisher et al., 2012)
dorsal head epidermis primordium

Comment: reported as procephalic ectoderm primordium

(Fisher et al., 2012)
lateral head epidermis primordium

Comment: reported as procephalic ectoderm primordium

(Fisher et al., 2012)
ventral head epidermis primordium

Comment: reported as procephalic ectoderm primordium

(Fisher et al., 2012)
anterior endoderm
(Fisher et al., 2012)
foregut primordium
(Fisher et al., 2012)
head mesoderm
(Fisher et al., 2012)
organism | faint | ubiquitous
(Fisher et al., 2012)
posterior endoderm
(Fisher et al., 2012)
trunk mesoderm
(Fisher et al., 2012)
embryonic stage 11 -- 12
amnioserosa
(Fisher et al., 2012)
anterior midgut primordium
(Fisher et al., 2012)
central brain primordium
(Fisher et al., 2012)
embryonic central brain glial cell
(Fisher et al., 2012)
embryonic central brain neuron
(Fisher et al., 2012)
fat body/gonad primordium
(Fisher et al., 2012)
foregut primordium
(Fisher et al., 2012)
midline primordium
(Fisher et al., 2012)
midline ventral glial cell
(Fisher et al., 2012)
organism | faint | ubiquitous
(Fisher et al., 2012)
posterior midgut primordium
(Fisher et al., 2012)
trunk mesoderm
(Fisher et al., 2012)
ventral nerve cord primordium
(Fisher et al., 2012)
visceral muscle primordium
(Fisher et al., 2012)
embryonic stage 13 -- 16
dorsal histoblast nest abdominal
(Fisher et al., 2012)
dorsal imaginal tissue
(Fisher et al., 2012)
embryonic brain
(Fisher et al., 2012)
embryonic central brain surface glia
(Fisher et al., 2012)
embryonic dorsal epidermis
(Fisher et al., 2012)
embryonic esophagus
(Fisher et al., 2012)
embryonic proventriculus inner layer
(Fisher et al., 2012)
embryonic/larval circulatory system
(Fisher et al., 2012)
embryonic/larval dorsal vessel
(Fisher et al., 2012)
embryonic/larval fat body
(Fisher et al., 2012)
embryonic/larval lymph gland
(Fisher et al., 2012)
embryonic/larval nervous system
(Fisher et al., 2012)
embryonic/larval oenocyte
(Fisher et al., 2012)
embryonic/larval pericardial cell
(Fisher et al., 2012)
organism | faint | ubiquitous
(Fisher et al., 2012)
sensory nervous system primordium
(Fisher et al., 2012)
ventral imaginal tissue
(Fisher et al., 2012)
ventral midline
(Fisher et al., 2012)
ventral nerve cord
(Fisher et al., 2012)
ventral sensory complex primordium
(Fisher et al., 2012)
Additional Descriptive Data
Marker for
 
Subcellular Localization
CV Term
Polypeptide Expression
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
embryonic stage 6 -- 11
trunk mesoderm
• nucleus
(Zimmermann et al., 2006)
embryonic stage 12 -- 16
CNS glial cell
• nucleus
(Zimmermann et al., 2006)
PNS glial cell
• nucleus
(Zimmermann et al., 2006)
embryonic somatic muscle | subset
• nucleus

Comment: derived from the trunk mesoderm

(Zimmermann et al., 2006)
embryonic stage 16
embryonic fat body
• nucleus
(Zimmermann et al., 2006)
embryonic/larval lymph gland
• nucleus
(Zimmermann et al., 2006)
embryonic pericardial cell
• nucleus
(Zimmermann et al., 2006)
embryonic hemocyte
• nucleus
(Zimmermann et al., 2006)
larval stage
myoblast
• nucleus
(Zimmermann et al., 2006)
glial cell of embryonic/larval central nervous system
• nucleus
(Zimmermann et al., 2006)
wing disc
• nucleus
(Zimmermann et al., 2006)
Additional Descriptive Data
Mes2 protein is a nuclear protein detected in the trunk mesoderm starting at late gastrulation. It is restricted to the mesoderm until embryonic stage 10. Starting in stage 11, expression expands to include the neurogenic ectoderm. Expression then declines in muscles derived from the trunk mesoderm. The neuronal expression becomes restricted to glial cells and it is expressed in all glial cells of the central and peripheral nervous systems. At late embryonic stages, Mes2 is detected in tissues derived from the head mesoderm such as fat body, lymph glands, pericardial nephrocytes, and hemocytes.
(Zimmermann et al., 2006)
Marker for
 
Subcellular Localization
CV Term
Evidence
References
nucleus
inferred from direct assay
(Zimmermann et al., 2006)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\Mes2 in GBrowse 2
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Bulk Downloads
RNA-Seq RPKM values for all genes
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
Flygut - An atlas of the Drosophila adult midgut
Images
FlyExpress - Embryonic expression images (BDGP data)
  • Stages(s) 1-3
  • Stages(s) 4-6
  • Stages(s) 7-8
  • Stages(s) 9-10
  • Stages(s) 11-12
  • Stages(s) 13-16
FlyBase Wiki
Image Based Resources
Alleles, Insertions, and Transgenic Constructs
Classical and Insertion Alleles ( 11 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 8 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of Mes2
Transgenic constructs containing regulatory region of Mes2
Deletions and Duplications ( 2 )
Phenotypes
For more details about a specific phenotype click on the relevant allele symbol.
Lethality
Allele
lethal, with Scer\GAL4da.G32
lethal, with Scer\GAL4nos.PG
lethal, with Scer\GAL4pnr-MD237
lethal, with Scer\GAL4prd.RG1
lethal, with Scer\GAL4repo.PU
lethal, with Scer\GAL4Tub.PU
lethal, with Scer\GAL4Ubi.PU
lethal | first instar larval stage
lethal | first instar larval stage | germline clone
lethal - all die before end of embryonic stage, with Scer\GAL469B
lethal - all die before end of first instar larval stage, with Scer\GAL4how-24B, Scer\GAL4twi.PB
lethal - all die before end of first instar larval stage, with Scer\GAL4Mef2.PR, Scer\GAL4twi.PB
lethal - all die before end of first instar larval stage, with Scer\GAL4twi.2PE
lethal - all die before end of larval stage, with Scer\GAL471B
lethal - all die before end of pupal stage, with Scer\GAL4Bx-MS1096
lethal - all die before end of second instar larval stage, with Scer\GAL4gcm.PU
viable
Other Phenotypes
Allele
body size defective | first instar larval stage
hypoactive | first instar larval stage
some die during embryonic stage, with Scer\GAL469B
some die during first instar larval stage, with Scer\GAL4how-24B, Scer\GAL4twi.PB
some die during first instar larval stage, with Scer\GAL4Mef2.PR, Scer\GAL4twi.PB
some die during first instar larval stage, with Scer\GAL4twi.2PE
some die during larval stage, with Scer\GAL471B
some die during pupal stage, with Scer\GAL4Bx-MS1096
some die during second instar larval stage, with Scer\GAL4gcm.PU
Phenotype manifest in
Allele
embryonic/first instar larval cuticle
embryonic/first instar larval cuticle | germline clone
embryonic dorsal epidermis | dorsal closure stage, with Scer\GAL4da.G32
embryonic dorsal epidermis | dorsal closure stage, with Scer\GAL4nos.PG
embryonic dorsal epidermis | dorsal closure stage, with Scer\GAL4Ubi.PU
embryonic epidermis, with Scer\GAL469B
embryonic leading edge cell, with Scer\GAL469B
haltere, with Scer\GAL4Bx-MS1096
wing, with Scer\GAL4Bx-MS1096
Orthologs
Downloads
Download All DIOPT Orthologs
Download All OrthoDB Orthologs
Human Orthologs (via DIOPT v7.1)
Homo sapiens (Human) (0)
No records found.
Model Organism Orthologs (via DIOPT v7.1)
Mus musculus (laboratory mouse) (0)
No records found.
Rattus norvegicus (Norway rat) (0)
No records found.
Xenopus tropicalis (Western clawed frog) (1)
Xtro\LOC101734176
1 of 12
Yes
Yes
Danio rerio (Zebrafish) (5)
Drer\LOC100330838
2 of 15
Yes
No
Drer\si:ch211-207i20.3
2 of 15
Yes
No
Drer\si:zfos-128g4.1
2 of 15
Yes
No
Drer\zgc:152938
2 of 15
Yes
No
Drer\si:ch73-59f11.3
1 of 15
No
No
Caenorhabditis elegans (Nematode, roundworm) (5)
Cele\madf-2
2 of 15
Yes
Yes
Cele\madf-3
2 of 15
Yes
No
Cele\madf-4
2 of 15
Yes
No
Cele\madf-10
2 of 15
Yes
Yes
Cele\madf-9
1 of 15
No
No
Arabidopsis thaliana (thale-cress) (0)
No records found.
Saccharomyces cerevisiae (Brewer's yeast) (0)
No records found.
Schizosaccharomyces pombe (Fission yeast) (0)
No records found.
Orthologs in Drosophila Species (via OrthoDB v9.1) ( EOG091909C0 )
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly
Dmel\Mes2
Drosophila suzukii
Spotted wing Drosophila
Dsuz\DS10_00007641
Drosophila simulans
Dsim\GD15063
Drosophila sechellia
Dsec\GM22483
Drosophila erecta
Dere\GG16292
Drosophila yakuba
Dyak\Mes2
Drosophila yakuba
Dyak\GE22651
Drosophila ananassae
Dana\GF11009
Drosophila pseudoobscura pseudoobscura
Dpse\GA10759
Drosophila persimilis
Dper\GL24979
Drosophila persimilis
Dper\GL24980
Drosophila willistoni
Dwil\GK12966
Drosophila virilis
Dvir\GJ11803
Drosophila mojavensis
Dmoj\GI13441
Drosophila grimshawi
Dgri\GH16780
Orthologs in non-Drosophila Dipterans (via OrthoDB v9.1) ( EOG091508CP )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Musca domestica
House fly
Mdoa\17020956
Musca domestica
House fly
Mdoa\17022567
Glossina morsitans
Tsetse fly
Gmor\GMOY011201
Glossina morsitans
Tsetse fly
Gmor\GMOY011202
Lucilia cuprina
Australian sheep blowfly
Lcup\FF38_07664
Lucilia cuprina
Australian sheep blowfly
Lcup\FF38_12253
Mayetiola destructor
Hessian fly
Mdes\Mdes010475
Orthologs in non-Dipteran Insects (via OrthoDB v9.1) ( None identified )
No non-Dipteran orthologies identified
Orthologs in non-Insect Arthropods (via OrthoDB v9.1) ( None identified )
No non-Insect Arthropod orthologies identified
Orthologs in non-Arthropod Metazoa (via OrthoDB v9.1) ( None identified )
No non-Arthropod Metazoa orthologies identified
Paralogs
Downloads
Download All DIOPT Paralogs
Paralogs (via DIOPT v7.1)
Drosophila melanogaster (Fruit fly) (27)
Gene Symbol
Score
Source
Compara
eggNOG
Homologene
Inparanoid
Isobase
OrthoDB
OrthoFinder
orthoMCL
Panther
RoundUp
Alignment
Adf1
2 of 10
CG8765
2 of 10
CG10949
2 of 10
CG12768
2 of 10
hng1
2 of 10
hng2
2 of 10
jigr1
2 of 10
brwl
1 of 10
CG3919
1 of 10
CG4404
1 of 10
CG6163
1 of 10
CG6276
1 of 10
CG6683
1 of 10
CG7745
1 of 10
CG8119
1 of 10
CG9948
1 of 10
CG11504
1 of 10
CG11723
1 of 10
CG12155
1 of 10
CG13204
1 of 10
CG42526
1 of 10
CG45071
1 of 10
Coop
1 of 10
Dlip3
1 of 10
Hmr
1 of 10
hng3
1 of 10
stwl
1 of 10
Human Disease Associations
FlyBase Human Disease Model Reports
    Disease Model Summary Ribbon
    Disease Ontology (DO) Annotations
    Models Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Evidence
    References
    Potential Models Based on Orthology ( 0 )
    Human Ortholog
    Disease
    Evidence
    References
    Modifiers Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Interaction
    References
    Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
     
    Disease Associations of Human Orthologs (via DIOPT v7.1 and OMIM)
    Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
    Homo sapiens (Human)
    Gene name
    Score
    OMIM
    OMIM Phenotype
    DO term
    Complementation?
    Transgene?
    Functional Complementation Data
    Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
    Interactions
    Summary of Physical Interactions
    Summary of Genetic Interactions
    esyN Network Diagram
    Starting gene(s)
    Interaction type
    Interacting gene(s)
    Reference
    Starting gene(s)
    Interaction type
    Interacting gene(s)
    Reference
    External Data
    Linkouts
    BioGRID - A database of protein and genetic interactions.
    DroID - A comprehensive database of gene and protein interactions.
    InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.
    MIST (protein-protein) - An integrated Molecular Interaction Database
    Pathways
    Gene Group - Pathway Membership (FlyBase)
    External Data
    Linkouts
    Genomic Location and Detailed Mapping Data
    Chromosome (arm)
    3L
    Recombination map
    3-47
    Cytogenetic map
    80C1-80C1
    Sequence location
    3L:22,945,657..22,952,248 [+]
    FlyBase Computed Cytological Location
    Cytogenetic map
    Evidence for location
    80C1-80C1
    Limits computationally determined from genome sequence between P{lacW}l(3)j1B10j1B10 and P{lacW}l(3)j2C4j2C4
    Experimentally Determined Cytological Location
    Cytogenetic map
    Notes
    References
    Experimentally Determined Recombination Data
    Location
    3-47
    (FlyBase, 2016)
    3-44.0
    (Comeron et al., 2012)
    Left of (cM)
    Right of (cM)
    Notes
    Stocks and Reagents
    Stocks (11)
    Genomic Clones (16)
     

    Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

    cDNA Clones (81)
     

    Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

    cDNA clones, fully sequences
    BDGP DGC clones
    Other clones
    Drosophila Genomics Resource Center cDNA clones

    For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

    cDNA Clones, End Sequenced (ESTs)
    BDGP DGC clones
    Other clones
    RNAi and Array Information
    Linkouts
    DRSC - Results frm RNAi screens
    GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents
    Antibody Information
    Laboratory Generated Antibodies
     
    polyclonal
    (Zimmermann et al., 2006)
    Commercially Available Antibodies
     
    Other Information
    Relationship to Other Genes
    Source for database identify of
    Source for identity of: Mes2 CG11100
    (Stathopoulos et al., 2002)
    Source for database merge of
    Additional comments
    Other Comments
    Origin and Etymology
    Discoverer
    Etymology
    Identification
    External Crossreferences and Linkouts ( 49 )
    Sequence Crossreferences
    NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
    GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
    GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
    RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
    UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information
    Other crossreferences
    BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
    Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones
    Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
    Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
    Flygut - An atlas of the Drosophila adult midgut
    GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents
    InterPro - A database of protein families, domains and functional sites
    KEGG Genes - Molecular building blocks of life in the genomic space.
    modMine - A data warehouse for the modENCODE project
    Linkouts
    BioGRID - A database of protein and genetic interactions.
    DPiM - Drosophila Protein interaction map
    DroID - A comprehensive database of gene and protein interactions.
    DRSC - Results frm RNAi screens
    FLIGHT - Cell culture data for RNAi and other high-throughput technologies
    FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
    FlyMine - An integrated database for Drosophila genomics
    InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.
    MIST (protein-protein) - An integrated Molecular Interaction Database
    Synonyms and Secondary IDs (6)
    Datasets (0)
    Study focus (0)
    Experimental Role
    Project
    Project Type
    Title
    References (46)