A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\CG15184

General Information
SymbolDmel\CG15184SpeciesD. melanogaster
NameAnnotation symbol
Feature typeprotein_coding_geneFlyBase IDFBgn0037459
Gene Model StatusWithdrawn Stock availability None publicly available
Genomic Location
Chromosome (arm)Recombination map
Cytogenetic map83F4-83F4Sequence location
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Automatically generated summary

See sections below for more information
This gene is referred to in FlyBase by the symbol Dmel\CG15184 (FBgn0037459).The gene previously had a gene model which is not supported by current evidence. It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. One allele is reported. No phenotypic data is available. It has no annotated transcripts. Gene has not been localized to the genome sequence.
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2011_10
FB2012_01
References
FlyBase, 1992-, FlyBase curation
FlyBase, 1996-, FlyBase inference based on genome sequence analysis.
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
83F4-83F4  
Limits computationally determined from genome sequence between P{lacW}casj1C2 and P{PZ}lab01241  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
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Comments on Gene Model
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Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
 
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
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DDBJ /
EMBL /
GenBank
DNA sequence
 
Name
 
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Type
Symbol & Location
Additional Notes
References
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Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
hide Expression Clusters
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Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
•
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
•
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Phenotype manifest in
Allele
hide Classical Alleles ( 0 )
For All Classical Alleles Show

Allele of CG15184ClassMutagenStocksKnown lesion
hide Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show

Allele of CG15184ClassMutagenStocksKnown lesion
CG15184GD150790 Yes
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hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
UAS construct
P{GD15079}
NA
Insertions
Type of insertions
Name
Expression data
miscellaneous insertions
PBac{WH}f02608
NA
hide Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
hide Terms Based on Experimental Evidence ( 0 terms )
hide Terms Based on Predictions or Assertions ( 0 terms )
hide Sequence Ontology: Class of Gene
nuclear_gene
 
protein_coding_gene
 
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hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
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Interacts with
Please look at the allele data for full details of the genetic interactions
CG15184 allele
Gene
References
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Linkouts
DroID - A comprehensive database of gene and protein interactions.
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hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
 
Linkouts
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 0 )
hide Genomic Clones ( 0 )
hide cDNA Clones ( 0 )
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
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Linkouts
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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Source for database identity of
Source for database merge of
Additional comments
hide Other Comments
Annotation CG15184 eliminated in release 5.26 of the genome annotation.
(FlyBase Genome Annotators, 2010)
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Sequence Crossreferences
DDBJ / EMBL / GenBank
•
Entrez Gene - A searchable database of RefSeq genes.
•
UniProtKB/TrEMBL
•
Other Crossreferences
Linkouts
DroID - A comprehensive database of gene and protein interactions.
•
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
•
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
•
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
•
hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
CG15184
(Burmester et al., 2006, FlyBase Genome Annotators, 2010)
Name Synonym
Secondary FlyBase IDs
hide References ( 6 )
Research paper
Burmester et al., 2006, FEBS J. 273(3): 468--480
The hemoglobin genes of Drosophila. [FBrf0190459]
Supplementary material
Dietzl et al., 2007, Nature 448(7150):
Supplementary Table 1. [FBrf0202579]
Personal communication to FlyBase
Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase.
Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase analysis
FlyBase Genome Annotators, 2010, Changes affecting gene model number or type in release 5.26 of the annotated D.melanogaster genome.
Changes affecting gene model number or type in release 5.26 of the annotated D.melanogaster genome. [FBrf0209825]
FlyBase, 1996-, FlyBase inference based on genome sequence analysis.
FlyBase inference based on genome sequence analysis. [FBrf0104946]
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]