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Gene Dmel\CG11671

General Information
Symbol	Dmel\CG11671	Species	D. melanogaster
Name		Annotation symbol	CG11671
Feature type	protein_coding_gene	FlyBase ID	FBgn0037562
Gene Model Status	Current	Stock availability	2 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	84F8-84F8	Sequence location	3R:4,113,661..4,114,340 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG11671 (FBgn0037562). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed during late larval stages, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult midgut. Expression at moderate levels in the following post-embryonic organs or tissues: larval midgut, larval/adult hindgut. Comments on Affy2 ProbeSet: ProbeSet 1632882_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG11671. Gene sequence location is 3R:4113661..4114340.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features HFA14343 BKN30267
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 84F8-84F8   Limits computationally determined from genome sequence between P{PZ}Mcm2rL074 and P{EP}EP833
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG11671 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	GC splice donor site postulated
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG11671-RA FBtr0081829  NM_141521   623   140
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG11671-PA   FBpp0081319   14.9   140   5.77     NP_649778   AAF54210
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014297 AAF54210   AY118861 AAM50721   BI353486   BP549877   BP549878   EV585763
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VHT9
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0037562    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0037562 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed during late larval stages, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0037562 expression level Developmental Stage   Expression Level embryo 00-02hr    7 embryo 02-04hr    6 embryo 04-06hr    23 embryo 06-08hr    28 embryo 08-10hr    21 embryo 10-12hr    9 embryo 12-14hr    15 embryo 14-16hr    23 embryo 16-18hr    89 embryo 18-20hr    73 embryo 20-22hr    80 embryo 22-24hr    114 larva L1    106 larva L2    287 larva L3 12hr old    236 larva L3 puffstage 1-2    499 larva L3 puffstage 3-6    194 larva L3 puffstage 7-9    241 white prepupae new    150 white prepupae 12hr    198 white prepupae 24hr    39 pupae 2d postWPP    58 pupae 3d postWPP    99 pupae 4d postWPP    159 adult male 01day    534 adult male 05day    560 adult male 30day    629 adult female 01day    631 adult female 05day    696 adult female 30day    1201 Expression Level Scale  None   Extremely low   Very low   Low   Moderate  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    7 embryo 02-04hr    6 embryo 04-06hr    23 embryo 06-08hr    28 embryo 08-10hr    21 embryo 10-12hr    9 embryo 12-14hr    15 embryo 14-16hr    23 embryo 16-18hr    89 embryo 18-20hr    73 embryo 20-22hr    80 embryo 22-24hr  (114) larva L1  106 larva L2  (287) larva L3 12hr old  (236) larva L3 puffstage 1-2  (499) larva L3 puffstage 3-6  (194) larva L3 puffstage 7-9  (241) white prepupae new  (150) white prepupae 12hr  (198) white prepupae 24hr    39 pupae 2d postWPP    58 pupae 3d postWPP    99 pupae 4d postWPP  (159) adult male 01day  (534) adult male 05day  (560) adult male 30day  (629) adult female 01day  (631) adult female 05day  (696) adult female 30day  (1201) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    7 embryo 02-04hr    6 embryo 04-06hr    23 embryo 06-08hr    28 embryo 08-10hr    21 embryo 10-12hr    9 embryo 12-14hr    15 embryo 14-16hr    23 embryo 16-18hr    89 embryo 18-20hr    73 embryo 20-22hr    80 embryo 22-24hr    114 larva L1    106 larva L2    287 larva L3 12hr old    236 larva L3 puffstage 1-2    499 larva L3 puffstage 3-6    194 larva L3 puffstage 7-9    241 white prepupae new    150 white prepupae 12hr    198 white prepupae 24hr    39 pupae 2d postWPP    58 pupae 3d postWPP    99 pupae 4d postWPP    159 adult male 01day    534 adult male 05day    560 adult male 30day    629 adult female 01day    631 adult female 05day    696 adult female 30day    1201 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    7 embryo 02-04hr    6 embryo 04-06hr    23 embryo 06-08hr    28 embryo 08-10hr    21 embryo 10-12hr    9 embryo 12-14hr    15 embryo 14-16hr    23 embryo 16-18hr    89 embryo 18-20hr    73 embryo 20-22hr    80 embryo 22-24hr    114 larva L1    106 larva L2    287 larva L3 12hr old    236 larva L3 puffstage 1-2    499 larva L3 puffstage 3-6    194 larva L3 puffstage 7-9    241 white prepupae new    150 white prepupae 12hr    198 white prepupae 24hr    39 pupae 2d postWPP    58 pupae 3d postWPP    99 pupae 4d postWPP    159 adult male 01day    534 adult male 05day    560 adult male 30day    629 adult female 01day    631 adult female 05day    696 adult female 30day    1201 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    7 embryo 02-04hr    6 embryo 04-06hr    23 embryo 06-08hr    28 embryo 08-10hr    21 embryo 10-12hr    9 embryo 12-14hr    15 embryo 14-16hr    23 embryo 16-18hr    89 embryo 18-20hr    73 embryo 20-22hr    80 embryo 22-24hr    114 larva L1    106 larva L2    287 larva L3 12hr old    236 larva L3 puffstage 1-2    499 larva L3 puffstage 3-6    194 larva L3 puffstage 7-9    241 white prepupae new    150 white prepupae 12hr    198 white prepupae 24hr    39 pupae 2d postWPP    58 pupae 3d postWPP    99 pupae 4d postWPP    159 adult male 01day    534 adult male 05day    560 adult male 30day    629 adult female 01day    631 adult female 05day    696 adult female 30day    1201 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0037562 expression level Developmental Stage   Expression Level embryo 00-02hr    7 embryo 02-04hr    6 embryo 04-06hr    23 embryo 06-08hr    28 embryo 08-10hr    21 embryo 10-12hr    9 embryo 12-14hr    15 embryo 14-16hr    23 embryo 16-18hr    89 embryo 18-20hr    73 embryo 20-22hr    80 embryo 22-24hr    114 larva L1    106 larva L2    287 larva L3 12hr old    236 larva L3 puffstage 1-2    499 larva L3 puffstage 3-6    194 larva L3 puffstage 7-9    241 white prepupae new    150 white prepupae 12hr    198 white prepupae 24hr    39 pupae 2d postWPP    58 pupae 3d postWPP    99 pupae 4d postWPP    159 adult male 01day    534 adult male 05day    560 adult male 30day    629 adult female 01day    631 adult female 05day    696 adult female 30day    1201 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    7 embryo 02-04hr    6 embryo 04-06hr    23 embryo 06-08hr    28 embryo 08-10hr    21 embryo 10-12hr    9 embryo 12-14hr    15 embryo 14-16hr    23 embryo 16-18hr    89 embryo 18-20hr    73 embryo 20-22hr    80 embryo 22-24hr  114 larva L1  106 larva L2  (287) larva L3 12hr old  (236) larva L3 puffstage 1-2  (499) larva L3 puffstage 3-6  (194) larva L3 puffstage 7-9  (241) white prepupae new  (150) white prepupae 12hr  (198) white prepupae 24hr    39 pupae 2d postWPP    58 pupae 3d postWPP    99 pupae 4d postWPP  (159) adult male 01day  (534) adult male 05day  (560) adult male 30day  (629) adult female 01day  (631) adult female 05day  (696) adult female 30day  (1201) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    7 embryo 02-04hr    6 embryo 04-06hr    23 embryo 06-08hr    28 embryo 08-10hr    21 embryo 10-12hr    9 embryo 12-14hr    15 embryo 14-16hr    23 embryo 16-18hr    89 embryo 18-20hr    73 embryo 20-22hr    80 embryo 22-24hr    114 larva L1    106 larva L2    287 larva L3 12hr old    236 larva L3 puffstage 1-2    499 larva L3 puffstage 3-6    194 larva L3 puffstage 7-9    241 white prepupae new    150 white prepupae 12hr    198 white prepupae 24hr    39 pupae 2d postWPP    58 pupae 3d postWPP    99 pupae 4d postWPP    159 adult male 01day    534 adult male 05day    560 adult male 30day    629 adult female 01day    631 adult female 05day    696 adult female 30day    1201 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    7 embryo 02-04hr    6 embryo 04-06hr    23 embryo 06-08hr    28 embryo 08-10hr    21 embryo 10-12hr    9 embryo 12-14hr    15 embryo 14-16hr    23 embryo 16-18hr    89 embryo 18-20hr    73 embryo 20-22hr    80 embryo 22-24hr    114 larva L1    106 larva L2    287 larva L3 12hr old    236 larva L3 puffstage 1-2    499 larva L3 puffstage 3-6    194 larva L3 puffstage 7-9    241 white prepupae new    150 white prepupae 12hr    198 white prepupae 24hr    39 pupae 2d postWPP    58 pupae 3d postWPP    99 pupae 4d postWPP    159 adult male 01day    534 adult male 05day    560 adult male 30day    629 adult female 01day    631 adult female 05day    696 adult female 30day    1201 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    7 embryo 02-04hr    6 embryo 04-06hr    23 embryo 06-08hr    28 embryo 08-10hr    21 embryo 10-12hr    9 embryo 12-14hr    15 embryo 14-16hr    23 embryo 16-18hr    89 embryo 18-20hr    73 embryo 20-22hr    80 embryo 22-24hr    114 larva L1    106 larva L2    287 larva L3 12hr old    236 larva L3 puffstage 1-2    499 larva L3 puffstage 3-6    194 larva L3 puffstage 7-9    241 white prepupae new    150 white prepupae 12hr    198 white prepupae 24hr    39 pupae 2d postWPP    58 pupae 3d postWPP    99 pupae 4d postWPP    159 adult male 01day    534 adult male 05day    560 adult male 30day    629 adult female 01day    631 adult female 05day    696 adult female 30day    1201 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0037562    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0037562 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult midgut. Expression at moderate levels in the following post-embryonic organs or tissues: larval midgut, larval/adult hindgut. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0037562 expression level Tissue   Expression Level Larval Central Nervous System    1.275 Larval Midgut    225.3 Larval Hindgut    119.3 Larval Malpighian Tubules no informative data Larval Fat Body    2.4 Larval Salivary Gland    1.5 Larval Trachea    3.875 Larval Carcass    2.55 Adult Head    5.2 Adult Eye    4.75 Adult Brain    1.5 Adult Thoracic-Abdominal Ganglion    0.9 Adult Crop    1.8 Adult Midgut    2354.7 Adult Hindgut    262.4 Adult Malpighian Tubules no informative data Adult Fat Body    7.9 Adult Salivary Gland    4 Adult Heart    7 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    0.8 Adult Testis    2.8 Adult Male Accessory Gland    1.3 Adult Carcass    5.7 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    1.275 Larval Midgut    225.3 Larval Hindgut    119.3 Larval Malpighian Tubules no informative data Larval Fat Body    2.4 Larval Salivary Gland    1.5 Larval Trachea    3.875 Larval Carcass    2.55 Adult Head    5.2 Adult Eye    4.75 Adult Brain    1.5 Adult Thoracic-Abdominal Ganglion    0.9 Adult Crop    1.8 Adult Midgut  (2354.7) Adult Hindgut    262.4 Adult Malpighian Tubules no informative data Adult Fat Body    7.9 Adult Salivary Gland    4 Adult Heart    7 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    0.8 Adult Testis    2.8 Adult Male Accessory Gland    1.3 Adult Carcass    5.7 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    1.275 Larval Midgut    225.3 Larval Hindgut    119.3 Larval Malpighian Tubules no informative data Larval Fat Body    2.4 Larval Salivary Gland    1.5 Larval Trachea    3.875 Larval Carcass    2.55 Adult Head    5.2 Adult Eye    4.75 Adult Brain    1.5 Adult Thoracic-Abdominal Ganglion    0.9 Adult Crop    1.8 Adult Midgut  (2354.7) Adult Hindgut    262.4 Adult Malpighian Tubules no informative data Adult Fat Body    7.9 Adult Salivary Gland    4 Adult Heart    7 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    0.8 Adult Testis    2.8 Adult Male Accessory Gland    1.3 Adult Carcass    5.7 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    1.275 Larval Midgut    225.3 Larval Hindgut    119.3 Larval Malpighian Tubules no informative data Larval Fat Body    2.4 Larval Salivary Gland    1.5 Larval Trachea    3.875 Larval Carcass    2.55 Adult Head    5.2 Adult Eye    4.75 Adult Brain    1.5 Adult Thoracic-Abdominal Ganglion    0.9 Adult Crop    1.8 Adult Midgut    2354.7 Adult Hindgut    262.4 Adult Malpighian Tubules no informative data Adult Fat Body    7.9 Adult Salivary Gland    4 Adult Heart    7 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    0.8 Adult Testis    2.8 Adult Male Accessory Gland    1.3 Adult Carcass    5.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0037562 expression level Tissue   Expression Level Larval Central Nervous System    1.275 Larval Midgut    225.3 Larval Hindgut    119.3 Larval Malpighian Tubules no informative data Larval Fat Body    2.4 Larval Salivary Gland    1.5 Larval Trachea    3.875 Larval Carcass    2.55 Adult Head    5.2 Adult Eye    4.75 Adult Brain    1.5 Adult Thoracic-Abdominal Ganglion    0.9 Adult Crop    1.8 Adult Midgut    2354.7 Adult Hindgut    262.4 Adult Malpighian Tubules no informative data Adult Fat Body    7.9 Adult Salivary Gland    4 Adult Heart    7 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    0.8 Adult Testis    2.8 Adult Male Accessory Gland    1.3 Adult Carcass    5.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    1.275 Larval Midgut    225.3 Larval Hindgut    119.3 Larval Malpighian Tubules no informative data Larval Fat Body    2.4 Larval Salivary Gland    1.5 Larval Trachea    3.875 Larval Carcass    2.55 Adult Head    5.2 Adult Eye    4.75 Adult Brain    1.5 Adult Thoracic-Abdominal Ganglion    0.9 Adult Crop    1.8 Adult Midgut  (2354.7) Adult Hindgut    262.4 Adult Malpighian Tubules no informative data Adult Fat Body    7.9 Adult Salivary Gland    4 Adult Heart    7 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    0.8 Adult Testis    2.8 Adult Male Accessory Gland    1.3 Adult Carcass    5.7 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    1.275 Larval Midgut    225.3 Larval Hindgut    119.3 Larval Malpighian Tubules no informative data Larval Fat Body    2.4 Larval Salivary Gland    1.5 Larval Trachea    3.875 Larval Carcass    2.55 Adult Head    5.2 Adult Eye    4.75 Adult Brain    1.5 Adult Thoracic-Abdominal Ganglion    0.9 Adult Crop    1.8 Adult Midgut  (2354.7) Adult Hindgut    262.4 Adult Malpighian Tubules no informative data Adult Fat Body    7.9 Adult Salivary Gland    4 Adult Heart    7 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    0.8 Adult Testis    2.8 Adult Male Accessory Gland    1.3 Adult Carcass    5.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    1.275 Larval Midgut    225.3 Larval Hindgut    119.3 Larval Malpighian Tubules no informative data Larval Fat Body    2.4 Larval Salivary Gland    1.5 Larval Trachea    3.875 Larval Carcass    2.55 Adult Head    5.2 Adult Eye    4.75 Adult Brain    1.5 Adult Thoracic-Abdominal Ganglion    0.9 Adult Crop    1.8 Adult Midgut    2354.7 Adult Hindgut    262.4 Adult Malpighian Tubules no informative data Adult Fat Body    7.9 Adult Salivary Gland    4 Adult Heart    7 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    0.8 Adult Testis    2.8 Adult Male Accessory Gland    1.3 Adult Carcass    5.7 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules no informative data Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules no informative data Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    5.2   NA  Eye    4.75   NA  Brain    1.5   1.275  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    0.9   NA  Crop    1.8   225.3  Midgut    2354.7   119.3  Hindgut    262.4   no informative data  Malpighian Tubules    no informative data   2.4  Fat Body    7.9   1.5  Salivary Gland    4   NA  Heart    7   3.875  Trachea    NA   NA  VirginFemale Spermatheca    no informative data   NA  InseminatedFemale Spermatheca    no informative data   NA  Ovary    0.8   NA  Testis    2.8   NA  Male Accessory Gland    1.3   2.55  Carcass    5.7 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_16
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037562 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11671-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG11671GD4780 Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CG11671 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG11671 Class Mutagen Stocks Known lesion CG11671GD4780 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG11671KK110267 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel6147 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD4780} NA P{KK110267} NA
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG11671 allele Gene References
External Data
Linkouts	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0037562 DroID - A comprehensive database of gene and protein interactions. • FBgn0037562
Orthologs
Genome-wide drosophilid orthologs	Dana\GF18336 Dere\GG24365 Dper\GL23423 Dpse\GA11134 Dsec\GM23716 Dsim\GD18531 Dyak\GE25861
Curated drosophilid orthologs	Dpse\GA11134
Linkouts	OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV10085 FBgn0242911 FBgn0190054 FBgn0178581 FBgn0071189 FBgn0161013 FBgn0116497 FBgn0095354
Stocks & Reagents
Stocks Listed in FlyBase ( 2 )
VDRC	v101929 P{KK110267}VIE-260B v41146 w1118; P{GD4780}v41146
Genomic Clones ( 2 )
	BACR33N15 BACR45A07 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 4 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GM23845
Other clones	DPiM_GM23845
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones	Dmel_dig_005546_0666_3748 FGM104A05
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0037562 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 40976
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG11671 BcDNA:GM23845 (FlyBase, 1996-)
Additional comments	Source for merge of CG11671 BcDNA:GM23845 was a shared cDNA (date:030728). (FlyBase, 1996-)
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_141521 RefSeq (Proteins) • NP_649778 DDBJ / EMBL / GenBank • AAF54210 AAM50721 AY118861 BI353486 Entrez Gene - A searchable database of RefSeq genes. • 40976 UniProtKB/TrEMBL • Q9VHT9
Other Crossreferences
Linkouts
	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0037562 DroID - A comprehensive database of gene and protein interactions. • FBgn0037562 DRSC - Results from RNAi screens. • FBgn0037562 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037562 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11671-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0037562 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 40976 modMine - Data generated by the modENCODE project. • FBgn0037562 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV10085 FBgn0242911 FBgn0190054 FBgn0178581 FBgn0071189 FBgn0161013 FBgn0116497 FBgn0095354
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	BcDNA:GM23845   CG11671 (Roxstrom-Lindquist et al., 2004, Keleman et al., 2009.8.5, Otsuna and Ito, 2006)
Name Synonym
Secondary FlyBase IDs
	FBgn0063189
References ( 10 )
Research paper	Otsuna and Ito, 2006, J. comp. Neurol. 497(6): 928--958 Systematic analysis of the visual projection neurons of Drosophila melanogaster. I. Lobula-specific pathways. [FBrf0193607] Page et al., 2005, EMBO J. 24(24): 4304--4315 Spotted-dick, a zinc-finger protein of Drosophila required for expression of Orc4 and S phase. [FBrf0190363] Roxstrom-Lindquist et al., 2004, EMBO Rpts 5(2): 207--212 Parasite-specific immune response in adult Drosophila melanogaster: a genomic study. [FBrf0167559]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]