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Gene Dmel\CG11982

General Information
Symbol	Dmel\CG11982	Species	D. melanogaster
Name		Annotation symbol	CG11982
Feature type	protein_coding_gene	FlyBase ID	FBgn0037653
Gene Model Status	Current	Stock availability	4 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	85C2-85C2	Sequence location	3R:4,832,174..4,833,752 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG11982 (FBgn0037653). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: zinc ion binding. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Zinc finger, C3HC4 RING-type; Zinc finger, RING-type; Zinc finger, RING/FYVE/PHD-type. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages, in adult male stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1635513_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG11982. Gene sequence location is 3R:4832174..4833752.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features HFA14457 BKN21427
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 85C2-85C2   Limits computationally determined from genome sequence between P{lacW}l(3)L4740L4740 and P{EP}D1EP473
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG11982 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG11982-RA FBtr0081965  NM_141602   1579   380
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG11982-PA   FBpp0081445   40.3   380   4.40     NP_649859   AAF54321
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, RING-type (IPR001841) Zinc finger, C3HC4 RING-type (IPR018957) Zinc finger, RING/FYVE/PHD-type (IPR013083)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA264257   AA264952   AA439811   AA950840   AA990621   AE014297 AAF54321   AI108596   AI239159   AI403880   AI456136   AI514586   AI515261   AI518082   AI519431   AW943882   AY052007 AAK93431   BE976664   BF498043   BG633272   BI165123   BI171201   BI172704   BI212149   BI237487   BI237553   BI240243   BI241706   BI357506   BI366801   BI369675   BI483943   BI564736   BI565239   BI577967   BI583374   BI590894   BI611803   BI612580   BI614051   BI615290   BI617900   BI619126   BI623815   BI628475   BI630366   BI631601   BI637859   CK660891   CO278450   CO309804   CO316377   CO321073   EC083648   EC089403   EC236474   EV582868   EV586679   GH740111   GH741015   GH743209   GH745720   GH745970   GH746100   GH746673   GH761499   GH762558   GH762816   GH763196   GH763753   GH767323   GH779171   GO254367
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VHI7
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0037653    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0037653 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages, in adult male stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0037653 expression level Developmental Stage   Expression Level embryo 00-02hr    5573 embryo 02-04hr    5721 embryo 04-06hr    2715 embryo 06-08hr    2360 embryo 08-10hr    2597 embryo 10-12hr    2654 embryo 12-14hr    1571 embryo 14-16hr    1908 embryo 16-18hr    1452 embryo 18-20hr    1031 embryo 20-22hr    991 embryo 22-24hr    979 larva L1    1516 larva L2    1331 larva L3 12hr old    1179 larva L3 puffstage 1-2    1199 larva L3 puffstage 3-6    1714 larva L3 puffstage 7-9    1819 white prepupae new    1846 white prepupae 12hr    2343 white prepupae 24hr    3384 pupae 2d postWPP    3385 pupae 3d postWPP    3353 pupae 4d postWPP    3814 adult male 01day    5123 adult male 05day    6372 adult male 30day    7199 adult female 01day    2606 adult female 05day    2853 adult female 30day    2903 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (5573) embryo 02-04hr  (5721) embryo 04-06hr  (2715) embryo 06-08hr  (2360) embryo 08-10hr  (2597) embryo 10-12hr  (2654) embryo 12-14hr  (1571) embryo 14-16hr  (1908) embryo 16-18hr  (1452) embryo 18-20hr  (1031) embryo 20-22hr  (991) embryo 22-24hr  (979) larva L1  (1516) larva L2  (1331) larva L3 12hr old  (1179) larva L3 puffstage 1-2  (1199) larva L3 puffstage 3-6  (1714) larva L3 puffstage 7-9  (1819) white prepupae new  (1846) white prepupae 12hr  (2343) white prepupae 24hr  (3384) pupae 2d postWPP  (3385) pupae 3d postWPP  (3353) pupae 4d postWPP  (3814) adult male 01day  (5123) adult male 05day  (6372) adult male 30day  (7199) adult female 01day  (2606) adult female 05day  (2853) adult female 30day  (2903) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (5573) embryo 02-04hr  (5721) embryo 04-06hr  (2715) embryo 06-08hr  (2360) embryo 08-10hr  (2597) embryo 10-12hr  (2654) embryo 12-14hr  (1571) embryo 14-16hr  (1908) embryo 16-18hr  1452 embryo 18-20hr    1031 embryo 20-22hr    991 embryo 22-24hr    979 larva L1  (1516) larva L2    1331 larva L3 12hr old    1179 larva L3 puffstage 1-2    1199 larva L3 puffstage 3-6  (1714) larva L3 puffstage 7-9  (1819) white prepupae new  (1846) white prepupae 12hr  (2343) white prepupae 24hr  (3384) pupae 2d postWPP  (3385) pupae 3d postWPP  (3353) pupae 4d postWPP  (3814) adult male 01day  (5123) adult male 05day  (6372) adult male 30day  (7199) adult female 01day  (2606) adult female 05day  (2853) adult female 30day  (2903) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    5573 embryo 02-04hr    5721 embryo 04-06hr    2715 embryo 06-08hr    2360 embryo 08-10hr    2597 embryo 10-12hr    2654 embryo 12-14hr    1571 embryo 14-16hr    1908 embryo 16-18hr    1452 embryo 18-20hr    1031 embryo 20-22hr    991 embryo 22-24hr    979 larva L1    1516 larva L2    1331 larva L3 12hr old    1179 larva L3 puffstage 1-2    1199 larva L3 puffstage 3-6    1714 larva L3 puffstage 7-9    1819 white prepupae new    1846 white prepupae 12hr    2343 white prepupae 24hr    3384 pupae 2d postWPP    3385 pupae 3d postWPP    3353 pupae 4d postWPP    3814 adult male 01day    5123 adult male 05day    6372 adult male 30day    7199 adult female 01day    2606 adult female 05day    2853 adult female 30day    2903 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    5573 embryo 02-04hr    5721 embryo 04-06hr    2715 embryo 06-08hr    2360 embryo 08-10hr    2597 embryo 10-12hr    2654 embryo 12-14hr    1571 embryo 14-16hr    1908 embryo 16-18hr    1452 embryo 18-20hr    1031 embryo 20-22hr    991 embryo 22-24hr    979 larva L1    1516 larva L2    1331 larva L3 12hr old    1179 larva L3 puffstage 1-2    1199 larva L3 puffstage 3-6    1714 larva L3 puffstage 7-9    1819 white prepupae new    1846 white prepupae 12hr    2343 white prepupae 24hr    3384 pupae 2d postWPP    3385 pupae 3d postWPP    3353 pupae 4d postWPP    3814 adult male 01day    5123 adult male 05day    6372 adult male 30day    7199 adult female 01day    2606 adult female 05day    2853 adult female 30day    2903 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0037653 expression level Developmental Stage   Expression Level embryo 00-02hr    5573 embryo 02-04hr    5721 embryo 04-06hr    2715 embryo 06-08hr    2360 embryo 08-10hr    2597 embryo 10-12hr    2654 embryo 12-14hr    1571 embryo 14-16hr    1908 embryo 16-18hr    1452 embryo 18-20hr    1031 embryo 20-22hr    991 embryo 22-24hr    979 larva L1    1516 larva L2    1331 larva L3 12hr old    1179 larva L3 puffstage 1-2    1199 larva L3 puffstage 3-6    1714 larva L3 puffstage 7-9    1819 white prepupae new    1846 white prepupae 12hr    2343 white prepupae 24hr    3384 pupae 2d postWPP    3385 pupae 3d postWPP    3353 pupae 4d postWPP    3814 adult male 01day    5123 adult male 05day    6372 adult male 30day    7199 adult female 01day    2606 adult female 05day    2853 adult female 30day    2903 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (5573) embryo 02-04hr  (5721) embryo 04-06hr  (2715) embryo 06-08hr  (2360) embryo 08-10hr  (2597) embryo 10-12hr  (2654) embryo 12-14hr  (1571) embryo 14-16hr  (1908) embryo 16-18hr  (1452) embryo 18-20hr  (1031) embryo 20-22hr  (991) embryo 22-24hr  (979) larva L1  (1516) larva L2  (1331) larva L3 12hr old  (1179) larva L3 puffstage 1-2  (1199) larva L3 puffstage 3-6  (1714) larva L3 puffstage 7-9  (1819) white prepupae new  (1846) white prepupae 12hr  (2343) white prepupae 24hr  (3384) pupae 2d postWPP  (3385) pupae 3d postWPP  (3353) pupae 4d postWPP  (3814) adult male 01day  (5123) adult male 05day  (6372) adult male 30day  (7199) adult female 01day  (2606) adult female 05day  (2853) adult female 30day  (2903) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (5573) embryo 02-04hr  (5721) embryo 04-06hr  (2715) embryo 06-08hr  2360 embryo 08-10hr  (2597) embryo 10-12hr  (2654) embryo 12-14hr  1571 embryo 14-16hr  1908 embryo 16-18hr  1452 embryo 18-20hr    1031 embryo 20-22hr    991 embryo 22-24hr    979 larva L1  1516 larva L2    1331 larva L3 12hr old    1179 larva L3 puffstage 1-2    1199 larva L3 puffstage 3-6  1714 larva L3 puffstage 7-9  1819 white prepupae new  1846 white prepupae 12hr  2343 white prepupae 24hr  (3384) pupae 2d postWPP  (3385) pupae 3d postWPP  (3353) pupae 4d postWPP  (3814) adult male 01day  (5123) adult male 05day  (6372) adult male 30day  (7199) adult female 01day  (2606) adult female 05day  (2853) adult female 30day  (2903) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    5573 embryo 02-04hr    5721 embryo 04-06hr    2715 embryo 06-08hr    2360 embryo 08-10hr    2597 embryo 10-12hr    2654 embryo 12-14hr    1571 embryo 14-16hr    1908 embryo 16-18hr    1452 embryo 18-20hr    1031 embryo 20-22hr    991 embryo 22-24hr    979 larva L1    1516 larva L2    1331 larva L3 12hr old    1179 larva L3 puffstage 1-2    1199 larva L3 puffstage 3-6    1714 larva L3 puffstage 7-9    1819 white prepupae new    1846 white prepupae 12hr    2343 white prepupae 24hr    3384 pupae 2d postWPP    3385 pupae 3d postWPP    3353 pupae 4d postWPP    3814 adult male 01day    5123 adult male 05day    6372 adult male 30day    7199 adult female 01day    2606 adult female 05day    2853 adult female 30day    2903 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    5573 embryo 02-04hr    5721 embryo 04-06hr    2715 embryo 06-08hr    2360 embryo 08-10hr    2597 embryo 10-12hr    2654 embryo 12-14hr    1571 embryo 14-16hr    1908 embryo 16-18hr    1452 embryo 18-20hr    1031 embryo 20-22hr    991 embryo 22-24hr    979 larva L1    1516 larva L2    1331 larva L3 12hr old    1179 larva L3 puffstage 1-2    1199 larva L3 puffstage 3-6    1714 larva L3 puffstage 7-9    1819 white prepupae new    1846 white prepupae 12hr    2343 white prepupae 24hr    3384 pupae 2d postWPP    3385 pupae 3d postWPP    3353 pupae 4d postWPP    3814 adult male 01day    5123 adult male 05day    6372 adult male 30day    7199 adult female 01day    2606 adult female 05day    2853 adult female 30day    2903 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0037653    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0037653 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0037653 expression level Tissue   Expression Level Larval Central Nervous System    240.625 Larval Midgut    132.4 Larval Hindgut    151.8 Larval Malpighian Tubules    190.4 Larval Fat Body    137.8 Larval Salivary Gland    170 Larval Trachea    216.275 Larval Carcass    180.7 Adult Head    217.6 Adult Eye    450.15 Adult Brain    302 Adult Thoracic-Abdominal Ganglion    246.4 Adult Crop    193.1 Adult Midgut    148.2 Adult Hindgut    200 Adult Malpighian Tubules    202.2 Adult Fat Body    136.2 Adult Salivary Gland    192.6 Adult Heart    166.35 Adult VirginFemale Spermatheca    114.9 Adult InseminatedFemale Spermatheca    108 Adult Ovary    290.9 Adult Testis    1072.6 Adult Male Accessory Gland    258.4 Adult Carcass    177 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    240.625 Larval Midgut    132.4 Larval Hindgut    151.8 Larval Malpighian Tubules    190.4 Larval Fat Body    137.8 Larval Salivary Gland    170 Larval Trachea    216.275 Larval Carcass    180.7 Adult Head    217.6 Adult Eye    450.15 Adult Brain    302 Adult Thoracic-Abdominal Ganglion    246.4 Adult Crop    193.1 Adult Midgut    148.2 Adult Hindgut    200 Adult Malpighian Tubules    202.2 Adult Fat Body    136.2 Adult Salivary Gland    192.6 Adult Heart    166.35 Adult VirginFemale Spermatheca    114.9 Adult InseminatedFemale Spermatheca    108 Adult Ovary    290.9 Adult Testis  (1072.6) Adult Male Accessory Gland    258.4 Adult Carcass    177 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    240.625 Larval Midgut    132.4 Larval Hindgut    151.8 Larval Malpighian Tubules    190.4 Larval Fat Body    137.8 Larval Salivary Gland    170 Larval Trachea    216.275 Larval Carcass    180.7 Adult Head    217.6 Adult Eye    450.15 Adult Brain    302 Adult Thoracic-Abdominal Ganglion    246.4 Adult Crop    193.1 Adult Midgut    148.2 Adult Hindgut    200 Adult Malpighian Tubules    202.2 Adult Fat Body    136.2 Adult Salivary Gland    192.6 Adult Heart    166.35 Adult VirginFemale Spermatheca    114.9 Adult InseminatedFemale Spermatheca    108 Adult Ovary    290.9 Adult Testis  1072.6 Adult Male Accessory Gland    258.4 Adult Carcass    177 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    240.625 Larval Midgut    132.4 Larval Hindgut    151.8 Larval Malpighian Tubules    190.4 Larval Fat Body    137.8 Larval Salivary Gland    170 Larval Trachea    216.275 Larval Carcass    180.7 Adult Head    217.6 Adult Eye    450.15 Adult Brain    302 Adult Thoracic-Abdominal Ganglion    246.4 Adult Crop    193.1 Adult Midgut    148.2 Adult Hindgut    200 Adult Malpighian Tubules    202.2 Adult Fat Body    136.2 Adult Salivary Gland    192.6 Adult Heart    166.35 Adult VirginFemale Spermatheca    114.9 Adult InseminatedFemale Spermatheca    108 Adult Ovary    290.9 Adult Testis    1072.6 Adult Male Accessory Gland    258.4 Adult Carcass    177 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0037653 expression level Tissue   Expression Level Larval Central Nervous System    240.625 Larval Midgut    132.4 Larval Hindgut    151.8 Larval Malpighian Tubules    190.4 Larval Fat Body    137.8 Larval Salivary Gland    170 Larval Trachea    216.275 Larval Carcass    180.7 Adult Head    217.6 Adult Eye    450.15 Adult Brain    302 Adult Thoracic-Abdominal Ganglion    246.4 Adult Crop    193.1 Adult Midgut    148.2 Adult Hindgut    200 Adult Malpighian Tubules    202.2 Adult Fat Body    136.2 Adult Salivary Gland    192.6 Adult Heart    166.35 Adult VirginFemale Spermatheca    114.9 Adult InseminatedFemale Spermatheca    108 Adult Ovary    290.9 Adult Testis    1072.6 Adult Male Accessory Gland    258.4 Adult Carcass    177 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    240.625 Larval Midgut    132.4 Larval Hindgut    151.8 Larval Malpighian Tubules    190.4 Larval Fat Body    137.8 Larval Salivary Gland    170 Larval Trachea    216.275 Larval Carcass    180.7 Adult Head    217.6 Adult Eye    450.15 Adult Brain    302 Adult Thoracic-Abdominal Ganglion    246.4 Adult Crop    193.1 Adult Midgut    148.2 Adult Hindgut    200 Adult Malpighian Tubules    202.2 Adult Fat Body    136.2 Adult Salivary Gland    192.6 Adult Heart    166.35 Adult VirginFemale Spermatheca    114.9 Adult InseminatedFemale Spermatheca    108 Adult Ovary    290.9 Adult Testis  (1072.6) Adult Male Accessory Gland    258.4 Adult Carcass    177 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    240.625 Larval Midgut    132.4 Larval Hindgut    151.8 Larval Malpighian Tubules    190.4 Larval Fat Body    137.8 Larval Salivary Gland    170 Larval Trachea    216.275 Larval Carcass    180.7 Adult Head    217.6 Adult Eye    450.15 Adult Brain    302 Adult Thoracic-Abdominal Ganglion    246.4 Adult Crop    193.1 Adult Midgut    148.2 Adult Hindgut    200 Adult Malpighian Tubules    202.2 Adult Fat Body    136.2 Adult Salivary Gland    192.6 Adult Heart    166.35 Adult VirginFemale Spermatheca    114.9 Adult InseminatedFemale Spermatheca    108 Adult Ovary    290.9 Adult Testis  1072.6 Adult Male Accessory Gland    258.4 Adult Carcass    177 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    240.625 Larval Midgut    132.4 Larval Hindgut    151.8 Larval Malpighian Tubules    190.4 Larval Fat Body    137.8 Larval Salivary Gland    170 Larval Trachea    216.275 Larval Carcass    180.7 Adult Head    217.6 Adult Eye    450.15 Adult Brain    302 Adult Thoracic-Abdominal Ganglion    246.4 Adult Crop    193.1 Adult Midgut    148.2 Adult Hindgut    200 Adult Malpighian Tubules    202.2 Adult Fat Body    136.2 Adult Salivary Gland    192.6 Adult Heart    166.35 Adult VirginFemale Spermatheca    114.9 Adult InseminatedFemale Spermatheca    108 Adult Ovary    290.9 Adult Testis    1072.6 Adult Male Accessory Gland    258.4 Adult Carcass    177 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    217.6   NA  Eye    450.15   NA  Brain    302   240.625  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    246.4   NA  Crop    193.1   132.4  Midgut    148.2   151.8  Hindgut    200   190.4  Malpighian Tubules    202.2   137.8  Fat Body    136.2   170  Salivary Gland    192.6   NA  Heart    166.35   216.275  Trachea    NA   NA  VirginFemale Spermatheca    114.9   NA  InseminatedFemale Spermatheca    108   NA  Ovary    290.9   NA  Testis    1072.6   NA  Male Accessory Gland    258.4   180.7  Carcass    177 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_21
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037653 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11982-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG11982GD7450 Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of CG11982 Class Mutagen Stocks Known lesion CG11982G4509 P-element activity 1 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG11982 Class Mutagen Stocks Known lesion CG11982GD7450 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG11982KK101376 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel6258 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD7450} NA P{KK101376} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EP}CG11982G4509 NA
Gene Ontology: Function, Process & Cellular Component ( 1 unique term )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function
CV term Evidence References
zinc ion binding inferred from electronic annotation with InterPro:IPR001841 (FlyBase Curators et al., 2004-)
Biological Process ( 0 terms)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG11982 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 66248 DroID - A comprehensive database of gene and protein interactions. • FBgn0037653 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 41080
Orthologs
Genome-wide drosophilid orthologs	Dana\GF16575 Dere\GG14428 Dgri\GH19379 Dmoj\GI22582 Dper\GL12113 Dpse\GA11309 Dsec\GM23778 Dsim\GD18588 Dvir\GJ10303 Dwil\GK11676 Dyak\GE25922
Curated drosophilid orthologs	Dpse\GA11309
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL013965-PA Aedes aegypti (mosquito) AGAP002758-PA Anopheles gambiae (mosquito) XP_623158.1 Apis mellifera (honey bee) XP_001949741.1 Acyrthosiphon pisum (pea aphid) At5g56340.1 Arabidopsis thaliana (wall cress) 124329 Branchiostoma floridae (lancelet) ENSBTAP00000019080 Bos taurus (bovine) CE22470 Caenorhabditis elegans (worm) ENSCAFP00000016496 Canis familiaris (dog) JA03921 Caenorhabditis japonica (nematode) cn07273 Cryptococcus neoformans (yeast-like fungus) cgd3_2060 Cryptosporidium parvum (protozoan parasite) CPIJ010005 Culex pipens (mosquito) ENSCPOP00000019427 Cavia porcellus (guinea pig) 180387 Capitella spl (polychaete worm) DDB0206368 Dictyostelium discoideum (amoeba) 304341 Daphnia pulex (daphnia) ENSDARP00000084762 Danio rerio (zebra fish) ENSECAP00000007050 Equus caballus (horse) ENSGACP00000020082 Gymnopilus aculeatus (mushroom) ENSGALP00000002124 Gallus gallus (chicken) 188105 Hypsipyla robusta (cedar shoot borer) ENSP00000341380 Homo sapiens (human) ENSP00000358297 Homo sapiens (human) ENSMODP00000008002 Monodelphis domestica (gray opossum) ENSMMUP00000011374 Macaca mulatta (rhesus monkey) ENSMUSP00000029740 Mus musculus (house mouse) ENSOANP00000004306 Ornithorynchus anatinus (platypus) ENSORLP00000019269 Oryzias latipes (japanese killifish) LOC_Os05g41520.1 Oryza sativa (asian rice) PHUM006788-PA Pediculus humanus (human body louse) 169900 Physcomitrella patens (moss) ENSPPYP00000001090 Pongo pygmaeus (orangutan) 134885 Phytophthora sojae (root rot pathogen) 652517 Populus trichocarpa (black cottonwood) ENSPTRP00000002061 Pan troglodytes (chimpanzee) ENSRNOP00000000110 Rattus norvegicus (norway rat) 4769291 Sorghum bicolor (sorghum) YDR143C Saccharomyces cerevisiae (budding yeast) Smp_049970.5 Schistosoma mansoni (trematode parasite) SPAP32A8.03c Schizosaccharomyces pombe (fission yeast) 54253 Trichoplax adhaerens (metazoa) XP_975905.1 Tribolium castaneum (red flour beetle) ENSTNIP00000018376 Tetraodon nigroviridis (green spotted pufferfish) 22692 Thalassiosira pseudonana (marine diatom) ENSTRUP00000024021 Takifugu rubripes (pufferfish Takifugu) 3707.m00156 Tetrahymena thermophila (ciliate protozoa) 85686.m00140 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000040440 Xenopus tropicalis (frog) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB18798 NV19213 LH19350 FBgn0242971 FBgn0213687 FBgn0197589 FBgn0190110 FBgn0178643 JGI_V11_304341 FBgn0071363 FBgn0149721 FBgn0145310 FBgn0106687 FBgn0093596 CPIJ010005 BGIBMGA012407 ACYPI004436 GB20149 AAEL013965 PHUM114800 GLEAN_11026
Stocks & Reagents
Stocks Listed in FlyBase ( 4 )
Bloomington	31786 w1118; P{EP}CG11982G4509/TM6C, Sb1
VDRC	v105651 P{KK101376}VIE-260B v38620 w1118; P{GD7450}v38620/CyO v38623 w1118; P{GD7450}v38623/TM3
Genomic Clones ( 2 )
	BACR02G22 BACR09F04 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 65 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD47007
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT12401 GH07787 GM03949 LD08069 LD08923 LD14478 LD30985 LD34417 LD35991 LD37494 LD39033 LD46103 LP19842 RE04943 RE12914 RE15356 RE17173 RE33722 RE33801 RE36943 RE38840 RE44016 RE52415 RE55936 RE66918 RE71748 RH04581 RH18221 RH21972 RH41506 RH43334 RH44888 RH48372 RH50103 RH56164 RH56896 RH59390 RH61209 RH62236 RH62958 SD19978
Other clones	bs54d07 Dmel_dig_014332_0595_3142 Dmel_neb_006542_0128_1070 EK130112 EK219347 EK264756 EK290250 GH23420 RP01150 RP01534 RP001005121 RP001005658 RP001006599 RP001010103 RP001011116 RP001020789 RP001025835 RP001029946 RP001032229 RP001039448 RP001046296 RP001054088 RP001055985
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0037653 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41080
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_141602 RefSeq (Proteins) • NP_649859 DDBJ / EMBL / GenBank • AAF54321 AAK93431 AI515261 AW943882 AY052007 Entrez Gene - A searchable database of RefSeq genes. • 41080 UniProtKB/TrEMBL • Q9VHI7
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, RING-type (IPR001841) Zinc finger, C3HC4 RING-type (IPR018957) Zinc finger, RING/FYVE/PHD-type (IPR013083)
Linkouts
	BioGRID - A database of protein and genetic interactions • 66248 DroID - A comprehensive database of gene and protein interactions. • FBgn0037653 DRSC - Results from RNAi screens. • FBgn0037653 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037653 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11982-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0037653 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41080 InParanoid A subset of ortholog calls from InParanoid. • AAEL013965-PA Aedes aegypti (mosquito) AGAP002758-PA Anopheles gambiae (mosquito) XP_623158.1 Apis mellifera (honey bee) XP_001949741.1 Acyrthosiphon pisum (pea aphid) At5g56340.1 Arabidopsis thaliana (wall cress) 124329 Branchiostoma floridae (lancelet) ENSBTAP00000019080 Bos taurus (bovine) CE22470 Caenorhabditis elegans (worm) ENSCAFP00000016496 Canis familiaris (dog) JA03921 Caenorhabditis japonica (nematode) cn07273 Cryptococcus neoformans (yeast-like fungus) cgd3_2060 Cryptosporidium parvum (protozoan parasite) CPIJ010005 Culex pipens (mosquito) ENSCPOP00000019427 Cavia porcellus (guinea pig) 180387 Capitella spl (polychaete worm) DDB0206368 Dictyostelium discoideum (amoeba) 304341 Daphnia pulex (daphnia) ENSDARP00000084762 Danio rerio (zebra fish) ENSECAP00000007050 Equus caballus (horse) ENSGACP00000020082 Gymnopilus aculeatus (mushroom) ENSGALP00000002124 Gallus gallus (chicken) 188105 Hypsipyla robusta (cedar shoot borer) ENSP00000341380 Homo sapiens (human) ENSP00000358297 Homo sapiens (human) ENSMODP00000008002 Monodelphis domestica (gray opossum) ENSMMUP00000011374 Macaca mulatta (rhesus monkey) ENSMUSP00000029740 Mus musculus (house mouse) ENSOANP00000004306 Ornithorynchus anatinus (platypus) ENSORLP00000019269 Oryzias latipes (japanese killifish) LOC_Os05g41520.1 Oryza sativa (asian rice) PHUM006788-PA Pediculus humanus (human body louse) 169900 Physcomitrella patens (moss) ENSPPYP00000001090 Pongo pygmaeus (orangutan) 134885 Phytophthora sojae (root rot pathogen) 652517 Populus trichocarpa (black cottonwood) ENSPTRP00000002061 Pan troglodytes (chimpanzee) ENSRNOP00000000110 Rattus norvegicus (norway rat) 4769291 Sorghum bicolor (sorghum) YDR143C Saccharomyces cerevisiae (budding yeast) Smp_049970.5 Schistosoma mansoni (trematode parasite) SPAP32A8.03c Schizosaccharomyces pombe (fission yeast) 54253 Trichoplax adhaerens (metazoa) XP_975905.1 Tribolium castaneum (red flour beetle) ENSTNIP00000018376 Tetraodon nigroviridis (green spotted pufferfish) 22692 Thalassiosira pseudonana (marine diatom) ENSTRUP00000024021 Takifugu rubripes (pufferfish Takifugu) 3707.m00156 Tetrahymena thermophila (ciliate protozoa) 85686.m00140 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000040440 Xenopus tropicalis (frog) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 41080 modMine - Data generated by the modENCODE project. • FBgn0037653 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB18798 NV19213 LH19350 FBgn0242971 FBgn0213687 FBgn0197589 FBgn0190110 FBgn0178643 JGI_V11_304341 FBgn0071363 FBgn0149721 FBgn0145310 FBgn0106687 FBgn0093596 CPIJ010005 BGIBMGA012407 ACYPI004436 GB20149 AAEL013965 PHUM114800 GLEAN_11026
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG11982 (Weiler, 2007, Keleman et al., 2009.8.5)
Name Synonym
Secondary FlyBase IDs
References ( 13 )
Research paper	Weiler, 2007, Genetics 177(1): 167--178 E(var)3-9 of Drosophila melanogaster Encodes a Zinc Finger Protein. [FBrf0201244]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Bellen, 2010.7.14, BDGP_2010_0715.GenExel.xml BDGP_2010_0715.GenExel.xml [FBrf0211255] Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Curated genome annotation	Li, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126682]