FB2021_01, released Feb 18, 2021

Gene: Dmel\CAH7

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General Information
Symbol
Dmel\CAH7
Species
D. melanogaster
Name
Carbonic anhydrase 7
Annotation Symbol
CG3940
Feature Type
protein_coding_gene
FlyBase ID
FBgn0037788
Gene Model Status
Current
Stock Availability
7 publicly available
Gene Snapshot
Contributions welcome
Other Summaries
Key Links
Genomic Location
Cytogenetic map
85F12-85F13
Sequence location
3R:10,112,237..10,120,081 [+]
Recombination map

3-49

RefSeq locus
NT_033777 REGION:10112237..10120081
Sequence
Get Decorated FASTA
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
NCBI
UCSC
Ensembl
PopFly
Function
GO Summary Ribbons
Gene Ontology (GO) Annotations (5 terms)
Molecular Function (3 terms)
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (3 terms)
CV Term
Evidence
References
enables carbonate dehydratase activity
inferred from biological aspect of ancestor with PANTHER:PTN001055642
(assigned by GO_Central )
(Gaudet et al., 2011)
enables hydro-lyase activity
inferred from biological aspect of ancestor with PANTHER:PTN001825752
(assigned by GO_Central )
(Gaudet et al., 2011)
enables zinc ion binding
inferred from electronic annotation with InterPro:IPR018338
(assigned by InterPro )
(FlyBase Curators et al., 2004-)
Biological Process (1 term)
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (1 term)
CV Term
Evidence
References
involved_in one-carbon metabolic process
inferred from biological aspect of ancestor with PANTHER:PTN001825752
(assigned by GO_Central )
(Gaudet et al., 2011)
Cellular Component (1 term)
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (1 term)
CV Term
Evidence
References
located_in plasma membrane
inferred from biological aspect of ancestor with PANTHER:PTN001055642
(assigned by GO_Central )
(Gaudet et al., 2011)
Gene Group (FlyBase)
Protein Family (UniProt)
-
Protein Signatures (InterPro)
Summaries
Gene Group (FlyBase)
CARBONIC ANHYDRASES -
Carbonic anhydrases (CA) are metalloenzymes that catalyze the reversible hydration/dehydration of carbon dioxide to bicarbonate and protons. (Adapted from FBrf0220988 and FBrf0229332).
Gene Model and Products
Number of Transcripts
3
Number of Unique Polypeptides
1

Please see the JBrowse view of Dmel\CAH7 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Comments on Gene Model

Gene model reviewed during 5.53

Low-frequency RNA-Seq exon junction(s) not annotated.

Sequence Ontology: Class of Gene
nuclear_gene
protein_coding_gene
Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
CAH7-RA
FBtr0082179
NM_141722
1410
304
CAH7-RB
FBtr0344391
NM_001300338
1719
304
CAH7-RC
FBtr0344392
NM_001300339
2067
304
Additional Transcript Data and Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank
CAH7-PA
FBpp0081657
33.9
304
4.81
NP_649979
AAF54494
CAH7-PB
FBpp0310764
33.9
304
4.81
NP_001287267
AHN57266
CAH7-PC
FBpp0310765
33.9
304
4.81
NP_001287268
AHN57267
Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

304 aa isoforms: CAH7-PA, CAH7-PB, CAH7-PC
Additional Polypeptide Data and Comments
Reported size (kDa)
Comments
External Data
Crossreferences
InterPro - A database of protein families, domains and functional sites
Linkouts
Sequences Consistent with the Gene Model
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\CAH7 using the Feature Mapper tool.

External Data
Crossreferences
Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
Linkouts
Expression Data
Expression Summary Ribbons
Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.
For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.
Transcript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
wandering third instar larval stage
wing pouch | restricted
(Molnar et al., 2012)
wing hinge primordium | restricted
(Molnar et al., 2012)
microinjection
Stage
Tissue/Position (including subcellular localization)
Reference
larval stage
embryonic/larval midgut

Comment: enriched in acidic region

(Overend et al., 2016)
gastric caecum
(Overend et al., 2016)
Additional Descriptive Data

RNA-seq data show that CAH7 is strongly expressed in the gastric caecum and is enriched in the acidic region of the larval midgut.

(Overend et al., 2016)
Marker for
 
Subcellular Localization
CV Term
Polypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
day 7 of adulthood -- day 49 of adulthood
adult heart
(Cammarato et al., 2011)
adult stage
adult head
(Aradska et al., 2015)
Additional Descriptive Data
Marker for
 
Subcellular Localization
CV Term
Evidence
References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\CAH7 in GBrowse 2
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Bulk Downloads
RNA-Seq RPKM values for all genes
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
Flygut - An atlas of the Drosophila adult midgut
Images
FlyBase Wiki
Image Based Resources
Alleles, Insertions, Transgenic Constructs, and Aberrations
Classical and Insertion Alleles ( 4 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 5 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of CAH7
Transgenic constructs containing regulatory region of CAH7
Aberrations (Deficiencies and Duplications) ( 1 )
Inferred from experimentation
Gene disrupted in
Df(3R)Exel6265
(Ryder, 2004.4.26)
Inferred from location
Phenotypes
For more details about a specific phenotype click on the relevant allele symbol.
Lethality
Allele
viable
viable, with Scer\GAL4Mef2.PR
viable, with Scer\GAL4pnr-MD237
viable, with Scer\GAL4tin.CΔ4
Sterility
Allele
fertile
Phenotype manifest in
Allele
Orthologs
Downloads
Download All DIOPT Orthologs
Download All OrthoDB Orthologs
Human Orthologs (via DIOPT v8.0)
Homo sapiens (Human) (19)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Source
Compara
eggNOG
Hieranoid
Homologene
Inparanoid
Isobase
OMA
OrthoDB
OrthoFinder
OrthoInspector
orthoMCL
Panther
Phylome
RoundUp
TreeFam
ZFIN
Alignment
Complementation?
Transgene?
Hsap\CA6
5 of 15
Yes
No
Hsap\CA9
5 of 15
Yes
No
Hsap\CA12
5 of 15
Yes
Yes
Hsap\CA14
5 of 15
Yes
Yes
Hsap\CA4
4 of 15
No
No
Hsap\CA10
4 of 15
No
No
1  
Hsap\CA1
3 of 15
No
No
Hsap\CA3
3 of 15
No
No
1  
Hsap\CA5A
3 of 15
No
No
Hsap\CA5B
3 of 15
No
No
1  
Hsap\CA11
3 of 15
No
No
Hsap\CA13
3 of 15
No
No
Hsap\CA7
2 of 15
No
No
Hsap\CA8
2 of 15
No
No
Hsap\CA2
1 of 15
No
No
Hsap\OGN
1 of 15
No
Yes
Hsap\PNP
1 of 15
No
No
Hsap\PTPRG
1 of 15
No
No
Hsap\SERPINC1
1 of 15
No
No
1  
Model Organism Orthologs (via DIOPT v8.0)
Mus musculus (laboratory mouse) (17)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Source
Compara
eggNOG
Hieranoid
Homologene
Inparanoid
Isobase
OMA
OrthoDB
OrthoFinder
OrthoInspector
orthoMCL
Panther
Phylome
RoundUp
TreeFam
ZFIN
Alignment
Complementation?
Transgene?
Mmus\Car6
5 of 15
Yes
Yes
Mmus\Car9
5 of 15
Yes
No
Mmus\Car12
5 of 15
Yes
Yes
Mmus\Car14
5 of 15
Yes
Yes
Mmus\Car15
5 of 15
Yes
No
Mmus\Car4
4 of 15
No
No
Mmus\Car10
4 of 15
No
No
Mmus\Car1
3 of 15
No
No
Mmus\Car3
3 of 15
No
No
Mmus\Car5a
3 of 15
No
No
Mmus\Car5b
3 of 15
No
No
Mmus\Car7
3 of 15
No
No
Mmus\Car8
3 of 15
No
No
Mmus\Car11
3 of 15
No
No
Mmus\Car2
2 of 15
No
No
Mmus\Car13
2 of 15
No
No
Mmus\Ptprg
1 of 15
No
No
Rattus norvegicus (Norway rat) (18)
Rnor\Ca6
5 of 13
Yes
No
Rnor\Ca9
5 of 13
Yes
No
Rnor\Ca12
5 of 13
Yes
No
Rnor\Ca14
5 of 13
Yes
Yes
Rnor\Ca4
4 of 13
No
No
Rnor\LOC103693605
4 of 13
No
No
Rnor\Ca3
3 of 13
No
No
Rnor\Ca5a
3 of 13
No
No
Rnor\Ca5b
3 of 13
No
No
Rnor\Ca8
3 of 13
No
No
Rnor\Ca11
3 of 13
No
No
Rnor\Ca13
3 of 13
No
No
Rnor\Car1
3 of 13
No
No
Rnor\Car7
3 of 13
No
No
Rnor\Car10
3 of 13
No
No
Rnor\Car15
3 of 13
No
Yes
Rnor\Car2
2 of 13
No
No
Rnor\Ptprg
1 of 13
No
No
Xenopus tropicalis (Western clawed frog) (18)
Xtro\ca4
4 of 12
Yes
No
Xtro\ca6
4 of 12
Yes
Yes
Xtro\ca12
4 of 12
Yes
Yes
Xtro\ca14
4 of 12
Yes
Yes
Xtro\LOC779564
4 of 12
Yes
Yes
Xtro\ca1
3 of 12
No
No
Xtro\ca3
3 of 12
No
No
Xtro\ca5b
3 of 12
No
No
Xtro\ca7
3 of 12
No
No
Xtro\ca8
3 of 12
No
No
Xtro\ca10
3 of 12
No
No
Xtro\ca11
3 of 12
No
No
Xtro\ca2
2 of 12
No
No
Xtro\ca9
1 of 12
No
Yes
Xtro\ca13
1 of 12
No
No
Xtro\car1_predicted
1 of 12
No
No
Xtro\LOC100496280
1 of 12
No
Yes
Xtro\LOC108644694
1 of 12
No
Yes
Danio rerio (Zebrafish) (22)
Drer\ca6
5 of 15
Yes
Yes
Drer\ca9
5 of 15
Yes
Yes
Drer\ca14
5 of 15
Yes
Yes
Drer\ca4a
4 of 15
No
No
Drer\ca4b
4 of 15
No
No
Drer\ca4c
4 of 15
No
No
Drer\ca12
4 of 15
No
Yes
Drer\ca15a
4 of 15
No
No
Drer\ca15b
4 of 15
No
No
Drer\ca15c
4 of 15
No
No
Drer\car15
4 of 15
No
No
Drer\zgc:153760
4 of 15
No
No
Drer\ca2
3 of 15
No
No
Drer\ca5a
3 of 15
No
No
Drer\ca7
3 of 15
No
No
Drer\ca8
3 of 15
No
No
Drer\ca10a
3 of 15
No
No
Drer\ca10b
3 of 15
No
No
Drer\cahz
3 of 15
No
No
Drer\si:ch211-173d10.4
3 of 15
No
No
Drer\ca16b
1 of 15
No
No
Drer\ptprga
1 of 15
No
No
Caenorhabditis elegans (Nematode, roundworm) (6)
Cele\cah-3
4 of 15
Yes
No
Cele\cah-5
4 of 15
Yes
No
Cele\cah-1
3 of 15
No
No
Cele\cah-2
3 of 15
No
No
Cele\cah-4
2 of 15
No
No
Cele\cah-6
2 of 15
No
No
Arabidopsis thaliana (thale-cress) (8)
Atha\ACA3
8 of 9
Yes
Yes
Atha\ACA5
7 of 9
No
Yes
Atha\ACA6
7 of 9
No
Yes
Atha\ACA7
7 of 9
No
Yes
Atha\ACA1
6 of 9
No
No
Atha\ACA2
6 of 9
No
Yes
Atha\ACA4
6 of 9
No
Yes
Atha\ACA8
6 of 9
No
Yes
Saccharomyces cerevisiae (Brewer's yeast) (0)
No records found.
Schizosaccharomyces pombe (Fission yeast) (0)
No records found.
Ortholog(s) in Drosophila Species (via OrthoDB v9.1) ( EOG09190BRG )
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila suzukii
Spotted wing Drosophila
Dsuz\DS10_00007735
Drosophila simulans
Dsim\GD18670
Drosophila sechellia
Dsec\GM23862
Drosophila erecta
Dere\GG17412
Drosophila yakuba
Dyak\GE26013
Drosophila ananassae
Dana\GF17859
Drosophila pseudoobscura pseudoobscura
Dpse\GA17790
Drosophila persimilis
Dper\GL27210
Drosophila willistoni
Dwil\GK10881
Drosophila virilis
Dvir\GJ10442
Drosophila mojavensis
Dmoj\GI23140
Drosophila grimshawi
Dgri\GH14247
Orthologs in non-Drosophila Dipterans (via OrthoDB v9.1) ( EOG091508DL )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Musca domestica
House fly
Mdoa\17018964
Glossina morsitans
Tsetse fly
Gmor\GMOY007342
Lucilia cuprina
Australian sheep blowfly
Lcup\FF38_04548
Mayetiola destructor
Hessian fly
Mdes\Mdes000204
Aedes aegypti
Yellow fever mosquito
Aaeg\AAEL009330
Aedes aegypti
Yellow fever mosquito
Aaeg\AAEL009323
Anopheles darlingi
American malaria mosquito
Adar\ADAC004946
Anopheles gambiae
Malaria mosquito
Agam\AGAP004895
Culex quinquefasciatus
Southern house mosquito
Cqui\CPIJ014281
Culex quinquefasciatus
Southern house mosquito
Cqui\CPIJ014280
Orthologs in non-Dipteran Insects (via OrthoDB v9.1) ( EOG090W090M )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Apis florea
Little honeybee
Aflo\4207957732
Apis mellifera
Western honey bee
Amel\GB47951
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP11268
Bombus terrestris
Buff-tailed bumblebee
Bter\15206952
Linepithema humile
Argentine ant
Lhum\LH24937
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:001cd0
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_03103
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_00648
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_08914
Tribolium castaneum
Red flour beetle
Tcas\TC034551
Tribolium castaneum
Red flour beetle
Tcas\TC008569
Tribolium castaneum
Red flour beetle
Tcas\TC032069
Rhodnius prolixus
Kissing bug
Rpro\RPRC000554
Cimex lectularius
Bed bug
Clec\CLEC005420
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_02440
Orthologs in non-Insect Arthropods (via OrthoDB v9.1) ( EOG090X08WJ )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Strigamia maritima
European centipede
Smar\SMAR008902
Tetranychus urticae
Two-spotted spider mite
Turt\tetur22g01420
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_442485
Orthologs in non-Arthropod Metazoa (via OrthoDB v9.1) ( EOG091G0XFM )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Cara14LA
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Cara12LA
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Cara8LB
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Cara8LA
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Cara2LA
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Cara2LB
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Cara1LA
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Cara4LB
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Cara5L
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Cara12LD
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Cara4LA
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Cara7LB
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Cah14L
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Cara12LB
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Cara7LA
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Cara1LB
Ciona intestinalis
Vase tunicate
Cint\ENSCING00000012565
Ciona intestinalis
Vase tunicate
Cint\ENSCING00000014586
Ciona intestinalis
Vase tunicate
Cint\ENSCING00000010731
Ciona intestinalis
Vase tunicate
Cint\ENSCING00000014543
Gallus gallus
Domestic chicken
Ggal\CA2
Gallus gallus
Domestic chicken
Ggal\CA8
Gallus gallus
Domestic chicken
Ggal\CA6
Gallus gallus
Domestic chicken
Ggal\CA5B
Gallus gallus
Domestic chicken
Ggal\CA9
Gallus gallus
Domestic chicken
Ggal\CA7
Gallus gallus
Domestic chicken
Ggal\LOC416927
Gallus gallus
Domestic chicken
Ggal\CA13
Gallus gallus
Domestic chicken
Ggal\CA3
Gallus gallus
Domestic chicken
Ggal\CA4
Gallus gallus
Domestic chicken
Ggal\ENSGALG00000028764
Gallus gallus
Domestic chicken
Ggal\ENSGALG00000027638
Gallus gallus
Domestic chicken
Ggal\CA12
Paralogs
Downloads
Download All DIOPT Paralogs
Paralogs (via DIOPT v8.0)
Drosophila melanogaster (Fruit fly) (14)
Gene Symbol
Score
Source
Compara
eggNOG
Homologene
Inparanoid
Isobase
OrthoDB
OrthoFinder
orthoMCL
Panther
RoundUp
Alignment
CAH1
5 of 10
CAH4
5 of 10
CAH5
5 of 10
CAH6
5 of 10
CAH8
5 of 10
CAH9
5 of 10
CAH15
5 of 10
CARPB
5 of 10
CAH2
4 of 10
CAH3
4 of 10
CAH13
4 of 10
CAH14
4 of 10
CAH16
4 of 10
CARPA
4 of 10
Human Disease Associations
FlyBase Human Disease Model Reports
    Disease Model Summary Ribbon
    Disease Ontology (DO) Annotations
    Models Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Evidence
    References
    Potential Models Based on Orthology ( 1 )
    Human Ortholog
    Disease
    Evidence
    References
    CA12; carbonic anhydrase 12
    model of  isolated hyperchlorhidrosis
    IEA
    (FlyBase, 2019-)
    Modifiers Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Interaction
    References
    Disease Associations of Human Orthologs (via DIOPT v8.0 and OMIM)
    Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
    Homo sapiens (Human)
    Gene name
    Score
    OMIM
    OMIM Phenotype
    DO term
    Complementation?
    Transgene?
    CA6; carbonic anhydrase 6
    5 of 15
    114780
        CA9; carbonic anhydrase 9
        5 of 15
        603179
            CA12; carbonic anhydrase 12
            5 of 15
            603263
            CA14; carbonic anhydrase 14
            5 of 15
            604832
                CA4; carbonic anhydrase 4
                4 of 15
                114760
                CA10; carbonic anhydrase 10
                4 of 15
                604642
                     
                    CA1; carbonic anhydrase 1
                    3 of 15
                    114800
                        CA3; carbonic anhydrase 3
                        3 of 15
                        114750
                             
                            CA5A; carbonic anhydrase 5A
                            3 of 15
                            114761
                              CA5B; carbonic anhydrase 5B
                              3 of 15
                              300230
                                   
                                  CA11; carbonic anhydrase 11
                                  3 of 15
                                  604644
                                      CA13; carbonic anhydrase 13
                                      3 of 15
                                      611436
                                          Functional Complementation Data
                                          Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
                                          Interactions
                                          Summary of Physical Interactions
                                          esyN Network Diagram
                                          Interactions Browser
                                          Summary of Genetic Interactions
                                          esyN Network Diagram
                                          Starting gene(s)
                                          Interaction type
                                          Interacting gene(s)
                                          Reference
                                          Starting gene(s)
                                          Interaction type
                                          Interacting gene(s)
                                          Reference
                                          External Data
                                          Linkouts
                                          DroID - A comprehensive database of gene and protein interactions.
                                          Pathways
                                          Signaling Pathways (FlyBase)
                                          Metabolic Pathways
                                          FlyCyc Pathways - Pathways from a BioCyc PGDB for Dmel
                                          KEGG Pathways - Wiring diagrams of molecular interactions, reactions and relations.
                                          External Data
                                          Linkouts
                                          Genomic Location and Detailed Mapping Data
                                          Chromosome (arm)
                                          3R
                                          Recombination map

                                          3-49

                                          Cytogenetic map
                                          85F12-85F13
                                          Sequence location
                                          3R:10,112,237..10,120,081 [+]
                                          FlyBase Computed Cytological Location
                                          Cytogenetic map
                                          Evidence for location
                                          85F12-85F13
                                          Limits computationally determined from genome sequence between P{EP}Fmr1EP3517&P{PZ}tws02414 and P{PZ}jumu06439&P{lacW}l(3)j8B6j8B6
                                          Experimentally Determined Cytological Location
                                          Cytogenetic map
                                          Notes
                                          References
                                          Experimentally Determined Recombination Data
                                          Location

                                          3-49

                                          (FlyBase, 2016)

                                          3-46.6

                                          (Comeron et al., 2012)
                                          Left of (cM)
                                          Right of (cM)
                                          Notes
                                          Stocks and Reagents
                                          Stocks (7)
                                          Genomic Clones (13)
                                           

                                          Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

                                          cDNA Clones (13)
                                           

                                          Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

                                          cDNA clones, fully sequenced
                                          BDGP DGC clones
                                          Other clones
                                            Drosophila Genomics Resource Center cDNA clones

                                            For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

                                            cDNA Clones, End Sequenced (ESTs)
                                            BDGP DGC clones
                                              Other clones
                                              RNAi and Array Information
                                              Linkouts
                                              DRSC - Results frm RNAi screens
                                              GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents
                                              Antibody Information
                                              Laboratory Generated Antibodies
                                               
                                              Commercially Available Antibodies
                                               
                                              Other Information
                                              Relationship to Other Genes
                                              Source for database identify of

                                              Source for identity of: CAH7 CG3940

                                              (Ortutay et al., 2010)
                                              Source for database merge of
                                              Additional comments
                                              Other Comments
                                              Origin and Etymology
                                              Discoverer
                                              Etymology
                                              Identification
                                              External Crossreferences and Linkouts ( 38 )
                                              Sequence Crossreferences
                                              NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
                                              GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
                                              GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
                                              RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
                                              UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information
                                              Other crossreferences
                                              Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones
                                              Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
                                              Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
                                              Flygut - An atlas of the Drosophila adult midgut
                                              GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents
                                              iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)
                                              InterPro - A database of protein families, domains and functional sites
                                              KEGG Genes - Molecular building blocks of life in the genomic space.
                                              modMine - A data warehouse for the modENCODE project
                                              Linkouts
                                              DroID - A comprehensive database of gene and protein interactions.
                                              DRSC - Results frm RNAi screens
                                              FLIGHT - Cell culture data for RNAi and other high-throughput technologies
                                              FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
                                              FlyCyc Genes - Genes from a BioCyc PGDB for Dmel
                                              FlyCyc Pathways - Pathways from a BioCyc PGDB for Dmel
                                              FlyMine - An integrated database for Drosophila genomics
                                              KEGG Pathways - Wiring diagrams of molecular interactions, reactions and relations.
                                              Synonyms and Secondary IDs (3)
                                              Datasets (0)
                                              Study focus (0)
                                              Experimental Role
                                              Project
                                              Project Type
                                              Title
                                              References (45)