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Gene Dmel\CG6693

General Information
Symbol	Dmel\CG6693	Species	D. melanogaster
Name		Annotation symbol	CG6693
Feature type	protein_coding_gene	FlyBase ID	FBgn0037878
Gene Model Status	Current	Stock availability	2 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	86D8-86D8	Sequence location	3R:7,045,990..7,047,361 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG6693 (FBgn0037878). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: heat shock protein binding; unfolded protein binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: protein folding. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Heat shock protein DnaJ; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, conserved site. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, larval fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval carcass. Comments on Affy2 ProbeSet: ProbeSet 1624858_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG6693. Gene sequence location is 3R:7045990..7047361.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2012_01	Sequence features HFA16097 BKN41880
FB2011_10
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 86D8-86D8   Limits computationally determined from genome sequence between P{EP}EP3340EP3340 and P{PZ}tho1&P{PZ}l(3)0462905275
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG6693 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG6693-RA FBtr0082367  NM_141795   1372   299
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG6693-PA   FBpp0081843   34.9   299   9.04     NP_650052   AAF54608
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Heat shock protein DnaJ, N-terminal (IPR001623) Heat shock protein DnaJ, conserved site (IPR018253) Heat shock protein DnaJ (IPR003095)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA246546   AA246695   AA735234   AA940751   AA941789   AE014297 AAF54608   AI515851   AI946091   AW941593   AY069345 AAL39490   BF506020   BG634657   BG636540   BI168159   BI212796   BI213972   BI229370   BI352591   BI564455   BI568568   BI576434   BP545969   BP547128   CK661465   EL885257   EL885258   EL885299   EL885380   EL885381   GH754182   GH756591   GH773114   GH808963   GH811773   GH823505   GH824332   GH852144   GH862134   GH872235   GH873520   GH875483   GH894508   GH904802   GH924429
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VGR7
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0037878    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0037878 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0037878 expression level Developmental Stage   Expression Level embryo 00-02hr    8531 embryo 02-04hr    12745 embryo 04-06hr    12231 embryo 06-08hr    7629 embryo 08-10hr    6195 embryo 10-12hr    4131 embryo 12-14hr    2292 embryo 14-16hr    2542 embryo 16-18hr    2153 embryo 18-20hr    1209 embryo 20-22hr    3767 embryo 22-24hr    3072 larva L1    951 larva L2    1090 larva L3 12hr old    801 larva L3 puffstage 1-2    1500 larva L3 puffstage 3-6    2204 larva L3 puffstage 7-9    2497 white prepupae new    2386 white prepupae 12hr    3069 white prepupae 24hr    3945 pupae 2d postWPP    2812 pupae 3d postWPP    1783 pupae 4d postWPP    1605 adult male 01day    2285 adult male 05day    3138 adult male 30day    2819 adult female 01day    2106 adult female 05day    3968 adult female 30day    4172 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (8531) embryo 02-04hr  (12745) embryo 04-06hr  (12231) embryo 06-08hr  (7629) embryo 08-10hr  (6195) embryo 10-12hr  (4131) embryo 12-14hr  (2292) embryo 14-16hr  (2542) embryo 16-18hr  (2153) embryo 18-20hr  (1209) embryo 20-22hr  (3767) embryo 22-24hr  (3072) larva L1  (951) larva L2  (1090) larva L3 12hr old  (801) larva L3 puffstage 1-2  (1500) larva L3 puffstage 3-6  (2204) larva L3 puffstage 7-9  (2497) white prepupae new  (2386) white prepupae 12hr  (3069) white prepupae 24hr  (3945) pupae 2d postWPP  (2812) pupae 3d postWPP  (1783) pupae 4d postWPP  (1605) adult male 01day  (2285) adult male 05day  (3138) adult male 30day  (2819) adult female 01day  (2106) adult female 05day  (3968) adult female 30day  (4172) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (8531) embryo 02-04hr  (12745) embryo 04-06hr  (12231) embryo 06-08hr  (7629) embryo 08-10hr  (6195) embryo 10-12hr  (4131) embryo 12-14hr  (2292) embryo 14-16hr  (2542) embryo 16-18hr  (2153) embryo 18-20hr    1209 embryo 20-22hr  (3767) embryo 22-24hr  (3072) larva L1    951 larva L2    1090 larva L3 12hr old    801 larva L3 puffstage 1-2  1500 larva L3 puffstage 3-6  (2204) larva L3 puffstage 7-9  (2497) white prepupae new  (2386) white prepupae 12hr  (3069) white prepupae 24hr  (3945) pupae 2d postWPP  (2812) pupae 3d postWPP  (1783) pupae 4d postWPP  (1605) adult male 01day  (2285) adult male 05day  (3138) adult male 30day  (2819) adult female 01day  (2106) adult female 05day  (3968) adult female 30day  (4172) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    8531 embryo 02-04hr  (12745) embryo 04-06hr  (12231) embryo 06-08hr    7629 embryo 08-10hr    6195 embryo 10-12hr    4131 embryo 12-14hr    2292 embryo 14-16hr    2542 embryo 16-18hr    2153 embryo 18-20hr    1209 embryo 20-22hr    3767 embryo 22-24hr    3072 larva L1    951 larva L2    1090 larva L3 12hr old    801 larva L3 puffstage 1-2    1500 larva L3 puffstage 3-6    2204 larva L3 puffstage 7-9    2497 white prepupae new    2386 white prepupae 12hr    3069 white prepupae 24hr    3945 pupae 2d postWPP    2812 pupae 3d postWPP    1783 pupae 4d postWPP    1605 adult male 01day    2285 adult male 05day    3138 adult male 30day    2819 adult female 01day    2106 adult female 05day    3968 adult female 30day    4172 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    8531 embryo 02-04hr    12745 embryo 04-06hr    12231 embryo 06-08hr    7629 embryo 08-10hr    6195 embryo 10-12hr    4131 embryo 12-14hr    2292 embryo 14-16hr    2542 embryo 16-18hr    2153 embryo 18-20hr    1209 embryo 20-22hr    3767 embryo 22-24hr    3072 larva L1    951 larva L2    1090 larva L3 12hr old    801 larva L3 puffstage 1-2    1500 larva L3 puffstage 3-6    2204 larva L3 puffstage 7-9    2497 white prepupae new    2386 white prepupae 12hr    3069 white prepupae 24hr    3945 pupae 2d postWPP    2812 pupae 3d postWPP    1783 pupae 4d postWPP    1605 adult male 01day    2285 adult male 05day    3138 adult male 30day    2819 adult female 01day    2106 adult female 05day    3968 adult female 30day    4172 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0037878 expression level Developmental Stage   Expression Level embryo 00-02hr    8531 embryo 02-04hr    12745 embryo 04-06hr    12231 embryo 06-08hr    7629 embryo 08-10hr    6195 embryo 10-12hr    4131 embryo 12-14hr    2292 embryo 14-16hr    2542 embryo 16-18hr    2153 embryo 18-20hr    1209 embryo 20-22hr    3767 embryo 22-24hr    3072 larva L1    951 larva L2    1090 larva L3 12hr old    801 larva L3 puffstage 1-2    1500 larva L3 puffstage 3-6    2204 larva L3 puffstage 7-9    2497 white prepupae new    2386 white prepupae 12hr    3069 white prepupae 24hr    3945 pupae 2d postWPP    2812 pupae 3d postWPP    1783 pupae 4d postWPP    1605 adult male 01day    2285 adult male 05day    3138 adult male 30day    2819 adult female 01day    2106 adult female 05day    3968 adult female 30day    4172 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (8531) embryo 02-04hr  (12745) embryo 04-06hr  (12231) embryo 06-08hr  (7629) embryo 08-10hr  (6195) embryo 10-12hr  (4131) embryo 12-14hr  (2292) embryo 14-16hr  (2542) embryo 16-18hr  (2153) embryo 18-20hr  (1209) embryo 20-22hr  (3767) embryo 22-24hr  (3072) larva L1  (951) larva L2  (1090) larva L3 12hr old  (801) larva L3 puffstage 1-2  (1500) larva L3 puffstage 3-6  (2204) larva L3 puffstage 7-9  (2497) white prepupae new  (2386) white prepupae 12hr  (3069) white prepupae 24hr  (3945) pupae 2d postWPP  (2812) pupae 3d postWPP  (1783) pupae 4d postWPP  (1605) adult male 01day  (2285) adult male 05day  (3138) adult male 30day  (2819) adult female 01day  (2106) adult female 05day  (3968) adult female 30day  (4172) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (8531) embryo 02-04hr  (12745) embryo 04-06hr  (12231) embryo 06-08hr  (7629) embryo 08-10hr  (6195) embryo 10-12hr  (4131) embryo 12-14hr  2292 embryo 14-16hr  (2542) embryo 16-18hr  2153 embryo 18-20hr    1209 embryo 20-22hr  (3767) embryo 22-24hr  (3072) larva L1    951 larva L2    1090 larva L3 12hr old    801 larva L3 puffstage 1-2  1500 larva L3 puffstage 3-6  2204 larva L3 puffstage 7-9  (2497) white prepupae new  2386 white prepupae 12hr  (3069) white prepupae 24hr  (3945) pupae 2d postWPP  (2812) pupae 3d postWPP  1783 pupae 4d postWPP  1605 adult male 01day  2285 adult male 05day  (3138) adult male 30day  (2819) adult female 01day  2106 adult female 05day  (3968) adult female 30day  (4172) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    8531 embryo 02-04hr  12745 embryo 04-06hr  12231 embryo 06-08hr    7629 embryo 08-10hr    6195 embryo 10-12hr    4131 embryo 12-14hr    2292 embryo 14-16hr    2542 embryo 16-18hr    2153 embryo 18-20hr    1209 embryo 20-22hr    3767 embryo 22-24hr    3072 larva L1    951 larva L2    1090 larva L3 12hr old    801 larva L3 puffstage 1-2    1500 larva L3 puffstage 3-6    2204 larva L3 puffstage 7-9    2497 white prepupae new    2386 white prepupae 12hr    3069 white prepupae 24hr    3945 pupae 2d postWPP    2812 pupae 3d postWPP    1783 pupae 4d postWPP    1605 adult male 01day    2285 adult male 05day    3138 adult male 30day    2819 adult female 01day    2106 adult female 05day    3968 adult female 30day    4172 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    8531 embryo 02-04hr    12745 embryo 04-06hr    12231 embryo 06-08hr    7629 embryo 08-10hr    6195 embryo 10-12hr    4131 embryo 12-14hr    2292 embryo 14-16hr    2542 embryo 16-18hr    2153 embryo 18-20hr    1209 embryo 20-22hr    3767 embryo 22-24hr    3072 larva L1    951 larva L2    1090 larva L3 12hr old    801 larva L3 puffstage 1-2    1500 larva L3 puffstage 3-6    2204 larva L3 puffstage 7-9    2497 white prepupae new    2386 white prepupae 12hr    3069 white prepupae 24hr    3945 pupae 2d postWPP    2812 pupae 3d postWPP    1783 pupae 4d postWPP    1605 adult male 01day    2285 adult male 05day    3138 adult male 30day    2819 adult female 01day    2106 adult female 05day    3968 adult female 30day    4172 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0037878    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0037878 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, larval fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0037878 expression level Tissue   Expression Level Larval Central Nervous System    463.875 Larval Midgut    81.9 Larval Hindgut    159.8 Larval Malpighian Tubules    123.8 Larval Fat Body    139.7 Larval Salivary Gland    281.6 Larval Trachea    228.35 Larval Carcass    126.025 Adult Head    154.3 Adult Eye    197.525 Adult Brain    257.2 Adult Thoracic-Abdominal Ganglion    263.4 Adult Crop    116.8 Adult Midgut    103 Adult Hindgut    148.9 Adult Malpighian Tubules    157.9 Adult Fat Body    60.7 Adult Salivary Gland    128.8 Adult Heart    94.8 Adult VirginFemale Spermatheca    93.1 Adult InseminatedFemale Spermatheca    102.9 Adult Ovary    473.3 Adult Testis    510.3 Adult Male Accessory Gland    140.4 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    463.875 Larval Midgut    81.9 Larval Hindgut    159.8 Larval Malpighian Tubules    123.8 Larval Fat Body    139.7 Larval Salivary Gland    281.6 Larval Trachea    228.35 Larval Carcass    126.025 Adult Head    154.3 Adult Eye    197.525 Adult Brain    257.2 Adult Thoracic-Abdominal Ganglion    263.4 Adult Crop    116.8 Adult Midgut    103 Adult Hindgut    148.9 Adult Malpighian Tubules    157.9 Adult Fat Body    60.7 Adult Salivary Gland    128.8 Adult Heart    94.8 Adult VirginFemale Spermatheca    93.1 Adult InseminatedFemale Spermatheca    102.9 Adult Ovary    473.3 Adult Testis  510.3 Adult Male Accessory Gland    140.4 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    463.875 Larval Midgut    81.9 Larval Hindgut    159.8 Larval Malpighian Tubules    123.8 Larval Fat Body    139.7 Larval Salivary Gland    281.6 Larval Trachea    228.35 Larval Carcass    126.025 Adult Head    154.3 Adult Eye    197.525 Adult Brain    257.2 Adult Thoracic-Abdominal Ganglion    263.4 Adult Crop    116.8 Adult Midgut    103 Adult Hindgut    148.9 Adult Malpighian Tubules    157.9 Adult Fat Body    60.7 Adult Salivary Gland    128.8 Adult Heart    94.8 Adult VirginFemale Spermatheca    93.1 Adult InseminatedFemale Spermatheca    102.9 Adult Ovary    473.3 Adult Testis    510.3 Adult Male Accessory Gland    140.4 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    463.875 Larval Midgut    81.9 Larval Hindgut    159.8 Larval Malpighian Tubules    123.8 Larval Fat Body    139.7 Larval Salivary Gland    281.6 Larval Trachea    228.35 Larval Carcass    126.025 Adult Head    154.3 Adult Eye    197.525 Adult Brain    257.2 Adult Thoracic-Abdominal Ganglion    263.4 Adult Crop    116.8 Adult Midgut    103 Adult Hindgut    148.9 Adult Malpighian Tubules    157.9 Adult Fat Body    60.7 Adult Salivary Gland    128.8 Adult Heart    94.8 Adult VirginFemale Spermatheca    93.1 Adult InseminatedFemale Spermatheca    102.9 Adult Ovary    473.3 Adult Testis    510.3 Adult Male Accessory Gland    140.4 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0037878 expression level Tissue   Expression Level Larval Central Nervous System    463.875 Larval Midgut    81.9 Larval Hindgut    159.8 Larval Malpighian Tubules    123.8 Larval Fat Body    139.7 Larval Salivary Gland    281.6 Larval Trachea    228.35 Larval Carcass    126.025 Adult Head    154.3 Adult Eye    197.525 Adult Brain    257.2 Adult Thoracic-Abdominal Ganglion    263.4 Adult Crop    116.8 Adult Midgut    103 Adult Hindgut    148.9 Adult Malpighian Tubules    157.9 Adult Fat Body    60.7 Adult Salivary Gland    128.8 Adult Heart    94.8 Adult VirginFemale Spermatheca    93.1 Adult InseminatedFemale Spermatheca    102.9 Adult Ovary    473.3 Adult Testis    510.3 Adult Male Accessory Gland    140.4 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    463.875 Larval Midgut    81.9 Larval Hindgut    159.8 Larval Malpighian Tubules    123.8 Larval Fat Body    139.7 Larval Salivary Gland    281.6 Larval Trachea    228.35 Larval Carcass    126.025 Adult Head    154.3 Adult Eye    197.525 Adult Brain    257.2 Adult Thoracic-Abdominal Ganglion    263.4 Adult Crop    116.8 Adult Midgut    103 Adult Hindgut    148.9 Adult Malpighian Tubules    157.9 Adult Fat Body    60.7 Adult Salivary Gland    128.8 Adult Heart    94.8 Adult VirginFemale Spermatheca    93.1 Adult InseminatedFemale Spermatheca    102.9 Adult Ovary    473.3 Adult Testis  510.3 Adult Male Accessory Gland    140.4 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    463.875 Larval Midgut    81.9 Larval Hindgut    159.8 Larval Malpighian Tubules    123.8 Larval Fat Body    139.7 Larval Salivary Gland    281.6 Larval Trachea    228.35 Larval Carcass    126.025 Adult Head    154.3 Adult Eye    197.525 Adult Brain    257.2 Adult Thoracic-Abdominal Ganglion    263.4 Adult Crop    116.8 Adult Midgut    103 Adult Hindgut    148.9 Adult Malpighian Tubules    157.9 Adult Fat Body    60.7 Adult Salivary Gland    128.8 Adult Heart    94.8 Adult VirginFemale Spermatheca    93.1 Adult InseminatedFemale Spermatheca    102.9 Adult Ovary    473.3 Adult Testis    510.3 Adult Male Accessory Gland    140.4 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    463.875 Larval Midgut    81.9 Larval Hindgut    159.8 Larval Malpighian Tubules    123.8 Larval Fat Body    139.7 Larval Salivary Gland    281.6 Larval Trachea    228.35 Larval Carcass    126.025 Adult Head    154.3 Adult Eye    197.525 Adult Brain    257.2 Adult Thoracic-Abdominal Ganglion    263.4 Adult Crop    116.8 Adult Midgut    103 Adult Hindgut    148.9 Adult Malpighian Tubules    157.9 Adult Fat Body    60.7 Adult Salivary Gland    128.8 Adult Heart    94.8 Adult VirginFemale Spermatheca    93.1 Adult InseminatedFemale Spermatheca    102.9 Adult Ovary    473.3 Adult Testis    510.3 Adult Male Accessory Gland    140.4 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass no informative data FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    154.3   NA  Eye    197.525   NA  Brain    257.2   463.875  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    263.4   NA  Crop    116.8   81.9  Midgut    103   159.8  Hindgut    148.9   123.8  Malpighian Tubules    157.9   139.7  Fat Body    60.7   281.6  Salivary Gland    128.8   NA  Heart    94.8   228.35  Trachea    NA   NA  VirginFemale Spermatheca    93.1   NA  InseminatedFemale Spermatheca    102.9   NA  Ovary    473.3   NA  Testis    510.3   NA  Male Accessory Gland    140.4   126.025  Carcass    no informative data modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_01
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037878 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6693-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG6693 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 7-8 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of CG6693 Class Mutagen Stocks Known lesion CG6693DG04511 1 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG6693 Class Mutagen Stocks Known lesion CG6693GLV21064 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG6693GD12004 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes CG6693KK115812 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD12004} NA P{KK115812} NA P{TRiP.GLV21064} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{wHy}CG6693DG04511 NA
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
	There is no information supporting a cellular component term for this gene. (Based on a review of available data on: 2008-09-22)
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
heat shock protein binding inferred from electronic annotation with InterPro:IPR001623, InterPro:IPR003095, InterPro:IPR018253 (FlyBase Curators et al., 2004-) unfolded protein binding inferred from electronic annotation with InterPro:IPR003095 (FlyBase Curators et al., 2004-)
Biological Process
CV term Evidence References
protein folding inferred from electronic annotation with InterPro:IPR003095 (FlyBase Curators et al., 2004-)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG6693 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0037878
Orthologs
Genome-wide drosophilid orthologs	Dana\GF18254 Dere\GG17234 Dgri\GH18109 Dmoj\GI24610 Dper\GL12034 Dpse\GA19786 Dsec\GM26115 Dsim\GD20675 Dvir\GJ22560 Dwil\GK12945 Dyak\GE24636
Curated drosophilid orthologs	Dpse\GA19786
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL000226-PA Aedes aegypti (mosquito) AGAP004849-PA Anopheles gambiae (mosquito) XP_001951129.1 Acyrthosiphon pisum (pea aphid) At5g06910.1 Arabidopsis thaliana (wall cress) 35143 Batrachochytrium dendrobatidis (chytrid fungus) 119789 Branchiostoma floridae (lancelet) 285878 Branchiostoma floridae (lancelet) XP_001900908.1 Brugia malayi (roundworm nematode) BGIBMGA012569-PA Bombyx mori (silk worm) ENSBTAP00000001254 Bos taurus (bovine) CN05242 Caenorhabditis brenneri (small nematode) CN21365 Caenorhabditis brenneri (small nematode) CBP00721 Caenorhabditis briggsae (nematode) CE03728 Caenorhabditis elegans (worm) ENSCAFP00000021605 Canis familiaris (dog) Chro.60153 Cryptosporidium hominis (obligate parasite) ENSCINP00000002303 Ciona intestinalis (sea squirt) JA11628 Caenorhabditis japonica (nematode) CMQ240C Cyanidioschyzon merolae (red alga) cn07376 Cryptococcus neoformans (yeast-like fungus) cgd6_1190 Cryptosporidium parvum (protozoan parasite) CPIJ004666 Culex pipens (mosquito) ENSCPOP00000014416 Cavia porcellus (guinea pig) 117915 Chlamidomonas reinhardtii (green alga) RP37673 Caenorhabditis remanei (nematode) 226031 Capitella spl (polychaete worm) DEHA2E01716g Debaryomyces Hansenii (yeast) 221714 Daphnia pulex (daphnia) ENSDARP00000044149 Danio rerio (zebra fish) ENSDARP00000097064 Danio rerio (zebra fish) ENSECAP00000003440 Equus caballus (horse) ENSGACP00000013582 Gymnopilus aculeatus (mushroom) ENSGALP00000004248 Gallus gallus (chicken) 172124 Hypsipyla robusta (cedar shoot borer) ENSP00000362041 Homo sapiens (human) ISCW013814-PA Ixodes scapularis (deer tick) 65996 Lottia gigantea (owl limpet) LmjF36.4470 Leishmania major (virus) 2825 Monocosta brevicollis (choanoflagellate) ENSMODP00000000193 Monodelphis domestica (gray opossum) ENSMMUP00000014787 Macaca mulatta (rhesus monkey) ENSMUSP00000022345 Mus musculus (house mouse) 184512 Nematostella vectensis (starlet anemone) XP_001601586.1 Nasonia vitripennis (wasp) ENSOANP00000001774 Ornithorynchus anatinus (platypus) ENSORLP00000006388 Oryzias latipes (japanese killifish) LOC_Os02g10220.1 Oryza sativa (asian rice) 16672 Ostreococcus tauri (green alga) PF14_0700 Plasmodium falciparum (protozoal parasite) PHUM005253-PA Pediculus humanus (human body louse) PP07593 Pristionchus pacificus (nematode) 137602 Physcomitrella patens (moss) ENSPPYP00000002719 Pongo pygmaeus (orangutan) 83396 Phytophthora ramorum (sudden oak death pathogen) 143152 Phytophthora sojae (root rot pathogen) 272540 Populus trichocarpa (black cottonwood) ENSPTRP00000058283 Pan troglodytes (chimpanzee) PVX_116820 Plasmodium vivax (protozoal parasite) ENSRNOP00000009009 Rattus norvegicus (norway rat) 4882460 Sorghum bicolor (sorghum) Smp_083450 Schistosoma mansoni (trematode parasite) SPAC1071.09c Schizosaccharomyces pombe (fission yeast) XP_001195500.1 Strongylocentrotus purpuratus (purple sea urchin) 21399 Trichoplax adhaerens (metazoa) TA07375 Theileria annulata (apicomplexan parasite) XP_966793.1 Tribolium castaneum (red flour beetle) Tc00.1047053503833.20 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053504147.60 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053511287.130 Trypanosoma cruzi (parasitic trypanosome) ENSTNIP00000020142 Tetraodon nigroviridis (green spotted pufferfish) TP04_0235 Theileria parva (parasitic protozoan) 17600 Thalassiosira pseudonana (marine diatom) ENSTRUP00000006353 Takifugu rubripes (pufferfish Takifugu) 196.m00046 Tetrahymena thermophila (ciliate protozoa) ENSXETP00000016306 Xenopus tropicalis (frog) YALI0E16665g Yarrowia lipolytica (nonconventional yeast) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB13803 NV16491 LH13480 ISCW013814 FBgn0241746 FBgn0214954 FBgn0209667 FBgn0192141 FBgn0180970 JGI_V11_307053 JGI_V11_221714 FBgn0079782 FBgn0149642 FBgn0147332 FBgn0125577 FBgn0109461 FBgn0095272 CPIJ004666 BGIBMGA012569 ACYPI36039 ACYPI004797 ACYPI000126 GB18305 AGAP004849 AAEL013852 AAEL013569 AAEL000226 PHUM267140 GLEAN_01365
Stocks & Reagents
Stocks Listed in FlyBase ( 2 )
Bloomington	35699 y1 sc* v1; P{TRiP.GLV21064}attP2 20383 y1 w67c23; P{wHy}CG6693DG04511/TM3, Sb1 Ser1
Genomic Clones ( 1 )
	BACR48M21 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 39 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD05521
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT08369 AT30950 GM19949 LD01649 LD05613 LD22954 LD25979 LD41537 LP20990 RE08723 RE18035 RE19638 RE27139 RH32992 RH40159 RH61735 SD14276
Other clones	bs20g07 FGH101D12 FGH113G02 IP16402 IP16502 IP16702 RP003017562 RP003066389 RP003085620 RP003098721 RP003112081 RP003148606 RP003188099 RP003267640 RP003276663 RP003298267 RP003311269 RP003321792 RP003335287 RP003351455 RP003633270
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0037878 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41346
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_141795 RefSeq (Proteins) • NP_650052 DDBJ / EMBL / GenBank • AA246546 AA735234 AAF54608 AAL39490 AI946091 AW941593 AY069345 Entrez Gene - A searchable database of RefSeq genes. • 41346 UniProtKB/TrEMBL • Q9VGR7
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Heat shock protein DnaJ, N-terminal (IPR001623) Heat shock protein DnaJ, conserved site (IPR018253) Heat shock protein DnaJ (IPR003095)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0037878 DRSC - Results from RNAi screens. • FBgn0037878 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037878 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6693-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0037878 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41346 InParanoid A subset of ortholog calls from InParanoid. • AAEL000226-PA Aedes aegypti (mosquito) AGAP004849-PA Anopheles gambiae (mosquito) XP_001951129.1 Acyrthosiphon pisum (pea aphid) At5g06910.1 Arabidopsis thaliana (wall cress) 35143 Batrachochytrium dendrobatidis (chytrid fungus) 119789 Branchiostoma floridae (lancelet) 285878 Branchiostoma floridae (lancelet) XP_001900908.1 Brugia malayi (roundworm nematode) BGIBMGA012569-PA Bombyx mori (silk worm) ENSBTAP00000001254 Bos taurus (bovine) CN05242 Caenorhabditis brenneri (small nematode) CN21365 Caenorhabditis brenneri (small nematode) CBP00721 Caenorhabditis briggsae (nematode) CE03728 Caenorhabditis elegans (worm) ENSCAFP00000021605 Canis familiaris (dog) Chro.60153 Cryptosporidium hominis (obligate parasite) ENSCINP00000002303 Ciona intestinalis (sea squirt) JA11628 Caenorhabditis japonica (nematode) CMQ240C Cyanidioschyzon merolae (red alga) cn07376 Cryptococcus neoformans (yeast-like fungus) cgd6_1190 Cryptosporidium parvum (protozoan parasite) CPIJ004666 Culex pipens (mosquito) ENSCPOP00000014416 Cavia porcellus (guinea pig) 117915 Chlamidomonas reinhardtii (green alga) RP37673 Caenorhabditis remanei (nematode) 226031 Capitella spl (polychaete worm) DEHA2E01716g Debaryomyces Hansenii (yeast) 221714 Daphnia pulex (daphnia) ENSDARP00000044149 Danio rerio (zebra fish) ENSDARP00000097064 Danio rerio (zebra fish) ENSECAP00000003440 Equus caballus (horse) ENSGACP00000013582 Gymnopilus aculeatus (mushroom) ENSGALP00000004248 Gallus gallus (chicken) 172124 Hypsipyla robusta (cedar shoot borer) ENSP00000362041 Homo sapiens (human) ISCW013814-PA Ixodes scapularis (deer tick) 65996 Lottia gigantea (owl limpet) LmjF36.4470 Leishmania major (virus) 2825 Monocosta brevicollis (choanoflagellate) ENSMODP00000000193 Monodelphis domestica (gray opossum) ENSMMUP00000014787 Macaca mulatta (rhesus monkey) ENSMUSP00000022345 Mus musculus (house mouse) 184512 Nematostella vectensis (starlet anemone) XP_001601586.1 Nasonia vitripennis (wasp) ENSOANP00000001774 Ornithorynchus anatinus (platypus) ENSORLP00000006388 Oryzias latipes (japanese killifish) LOC_Os02g10220.1 Oryza sativa (asian rice) 16672 Ostreococcus tauri (green alga) PF14_0700 Plasmodium falciparum (protozoal parasite) PHUM005253-PA Pediculus humanus (human body louse) PP07593 Pristionchus pacificus (nematode) 137602 Physcomitrella patens (moss) ENSPPYP00000002719 Pongo pygmaeus (orangutan) 83396 Phytophthora ramorum (sudden oak death pathogen) 143152 Phytophthora sojae (root rot pathogen) 272540 Populus trichocarpa (black cottonwood) ENSPTRP00000058283 Pan troglodytes (chimpanzee) PVX_116820 Plasmodium vivax (protozoal parasite) ENSRNOP00000009009 Rattus norvegicus (norway rat) 4882460 Sorghum bicolor (sorghum) Smp_083450 Schistosoma mansoni (trematode parasite) SPAC1071.09c Schizosaccharomyces pombe (fission yeast) XP_001195500.1 Strongylocentrotus purpuratus (purple sea urchin) 21399 Trichoplax adhaerens (metazoa) TA07375 Theileria annulata (apicomplexan parasite) XP_966793.1 Tribolium castaneum (red flour beetle) Tc00.1047053503833.20 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053504147.60 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053511287.130 Trypanosoma cruzi (parasitic trypanosome) ENSTNIP00000020142 Tetraodon nigroviridis (green spotted pufferfish) TP04_0235 Theileria parva (parasitic protozoan) 17600 Thalassiosira pseudonana (marine diatom) ENSTRUP00000006353 Takifugu rubripes (pufferfish Takifugu) 196.m00046 Tetrahymena thermophila (ciliate protozoa) ENSXETP00000016306 Xenopus tropicalis (frog) YALI0E16665g Yarrowia lipolytica (nonconventional yeast) modMine - Data generated by the modENCODE project. • FBgn0037878 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB13803 NV16491 LH13480 ISCW013814 FBgn0241746 FBgn0214954 FBgn0209667 FBgn0192141 FBgn0180970 JGI_V11_307053 JGI_V11_221714 FBgn0079782 FBgn0149642 FBgn0147332 FBgn0125577 FBgn0109461 FBgn0095272 CPIJ004666 BGIBMGA012569 ACYPI36039 ACYPI004797 ACYPI000126 GB18305 AGAP004849 AAEL013852 AAEL013569 AAEL000226 PHUM267140 GLEAN_01365
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG6693 (Casper and Van Doren, 2009, Keleman et al., 2009.8.5, Ni et al., 2011.7.19)
Name Synonym
Secondary FlyBase IDs
References ( 14 )
Research paper	Casper and Van Doren, 2009, Development 136(22): 3821--3830 The establishment of sexual identity in the Drosophila germline. [FBrf0209010] Page et al., 2005, EMBO J. 24(24): 4304--4315 Spotted-dick, a zinc-finger protein of Drosophila required for expression of Orc4 and S phase. [FBrf0190363]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Dietzl et al., 2007, Nature 448(7150): Supplementary Table 1. [FBrf0202579]
Personal communication to FlyBase	Ni et al., 2011.7.19, TRiP germline vector pVALIUM21. TRiP germline vector pVALIUM21. [FBrf0214641] Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Myrick et al., 2008.12.2, Alignment of P{wHy} collection to current genome. Alignment of P{wHy} collection to current genome. [FBrf0206273] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Oliver, 2001.8.16, File from B. Oliver containing information on ESTs expressed in the Drosophila testis, described in Andrews et al., 2000, Genome Res. 10(12): 2030-2043 (FBrf0132348). File from B. Oliver containing information on ESTs expressed in the Drosophila testis, described in Andrews et al., 2000, Genome Res. 10(12): 2030-2043 (FBrf0132348). [FBrf0137492]
FlyBase analysis	FlyBase Curators, 2002-, Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. [FBrf0159398] FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]