FB2020_01, released Feb 12, 2020

Gene: Dmel\fabp

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General Information
Symbol
Dmel\fabp
Species
D. melanogaster
Name
fatty acid binding protein
Annotation Symbol
CG6783
Feature Type
protein_coding_gene
FlyBase ID
FBgn0037913
Gene Model Status
Current
Stock Availability
7 publicly available
Gene Snapshot
fatty acid binding protein (fabp) encodes a protein involved in long term memory. [Date last reviewed: 2019-03-07]
Other Summaries
Also Known As

dFabp

Key Links
Genomic Location
Cytogenetic map
86E10-86E10
Sequence location
3R:11,559,896..11,567,054 [-]
Recombination map

3-51

RefSeq locus
NT_033777 REGION:11559896..11567054
Sequence
Get Decorated FASTA
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
NCBI
UCSC
Ensembl
PopFly
Function
GO Summary Ribbons
Protein Family (UniProt)
-
Protein Signatures (InterPro)
Molecular Function (GO)
[Detailed GO annotations]
Experimental Evidence
-
Predictions / Assertions
lipid binding
Summaries
Gene Model and Products
Number of Transcripts
3
Number of Unique Polypeptides
3

Please see the GBrowse view of Dmel\fabp or the JBrowse view of Dmel\fabp for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Comments on Gene Model

gene_with_dicistronic_mRNA ; SO:0000722

Gene model reviewed during 5.53

Multiphase exon postulated: this gene shares a region of coding sequence with an overlapping gene, but different reading frames are utilized in the overlapping coding region; overlap >20aa.

Sequence Ontology: Class of Gene
gene_with_dicistronic_mRNA
(FlyBase Genome Annotators, 2002-2003)
nuclear_gene
protein_coding_gene
Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
fabp-RA
FBtr0100320
NM_001032010
1051
117
fabp-RB
FBtr0100321
NM_001032009
723
130
fabp-RC
FBtr0100323
NM_001032008
1660
157
Additional Transcript Data and Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank
fabp-PA
FBpp0099725
12.8
117
6.51
NP_001027181
AAF54655
fabp-PB
FBpp0099726
14.5
130
5.29
NP_001027180
AAN13512
fabp-PC
FBpp0099728
17.1
157
5.81
NP_001027179
AAN13511
Polypeptides with Identical Sequences

None of the polypeptides share 100% sequence identity.

Additional Polypeptide Data and Comments
Reported size (kDa)
Comments
External Data
Crossreferences
InterPro - A database of protein families, domains and functional sites
Linkouts
Sequences Consistent with the Gene Model
Nucleotide / Polypeptide Records
 
UniProt
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\fabp using the Feature Mapper tool.

External Data
Crossreferences
Linkouts
Gene Ontology (4 terms)
Molecular Function (1 term)
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (1 term)
CV Term
Evidence
References
lipid binding
inferred from electronic annotation with InterPro:IPR000463, InterPro:IPR031259
(assigned by InterPro )
(FlyBase Curators et al., 2004-)
Biological Process (1 term)
Terms Based on Experimental Evidence (1 term)
CV Term
Evidence
References
long-term memory
inferred from mutant phenotype
(Gerstner et al., 2011)
Terms Based on Predictions or Assertions (0 terms)
Cellular Component (2 terms)
Terms Based on Experimental Evidence (2 terms)
CV Term
Evidence
References
cytosol
inferred from high throughput direct assay
(Lye et al., 2014)
nucleoplasm
inferred from high throughput direct assay
(Lye et al., 2014)
Terms Based on Predictions or Assertions (0 terms)
Expression Data
Expression Summary Ribbons
Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.
For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.
Transcript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
embryonic stage 13 -- 16
medial-most cell body glial cell
(Kearney et al., 2004)
northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
adult stage
adult head
(Gerstner et al., 2011)
Additional Descriptive Data

fabp transcripts display circadian cycling with elevated levels during sleep and reduced levels during the wake period. The peak precedes fabp protein accumulation.

(Gerstner et al., 2011)
Marker for
 
Subcellular Localization
CV Term
Polypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
day 7 of adulthood -- day 49 of adulthood
adult heart
(Cammarato et al., 2011)
adult stage
adult head
(Aradska et al., 2015)
western blot
Stage
Tissue/Position (including subcellular localization)
Reference
adult stage
adult head
(Gerstner et al., 2011)
Additional Descriptive Data

fabp protein accumulation displays circadian cycling with peak levels early in the waking phase.

(Gerstner et al., 2011)
Marker for
 
Subcellular Localization
CV Term
Evidence
References
cytosol
inferred from high throughput direct assay
(Lye et al., 2014)
nucleoplasm
inferred from high throughput direct assay
(Lye et al., 2014)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\fabp in GBrowse 2
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Bulk Downloads
RNA-Seq RPKM values for all genes
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
Flygut - An atlas of the Drosophila adult midgut
Images
FlyBase Wiki
Image Based Resources
Alleles, Insertions, and Transgenic Constructs
Classical and Insertion Alleles ( 11 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of fabp
Transgenic constructs containing regulatory region of fabp
Deletions and Duplications ( 0 )
Phenotypes
Orthologs
Downloads
Download All DIOPT Orthologs
Download All OrthoDB Orthologs
Human Orthologs (via DIOPT v7.1)
Homo sapiens (Human) (16)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Source
Compara
eggNOG
Hieranoid
Homologene
Inparanoid
Isobase
OMA
OrthoDB
OrthoFinder
OrthoInspector
orthoMCL
Panther
Phylome
RoundUp
TreeFam
ZFIN
Alignment
Complementation?
Transgene?
Hsap\FABP7
11 of 15
Yes
Yes
 
Hsap\PMP2
11 of 15
Yes
Yes
 
Hsap\FABP3
10 of 15
No
Yes
 
Hsap\FABP4
9 of 15
No
Yes
 
Hsap\FABP5
9 of 15
No
Yes
Hsap\FABP9
9 of 15
No
Yes
 
Hsap\FABP12
9 of 15
No
Yes
Hsap\FABP1
3 of 15
No
Yes
Hsap\FABP6
3 of 15
No
Yes
Hsap\CRABP1
2 of 15
No
Yes
Hsap\CRABP2
2 of 15
No
Yes
Hsap\RBP1
2 of 15
No
Yes
 
Hsap\RBP2
2 of 15
No
Yes
Hsap\RBP5
2 of 15
No
Yes
Hsap\RBP7
2 of 15
No
Yes
Hsap\FABP2
1 of 15
No
Yes
Model Organism Orthologs (via DIOPT v7.1)
Mus musculus (laboratory mouse) (15)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Source
Compara
eggNOG
Hieranoid
Homologene
Inparanoid
Isobase
OMA
OrthoDB
OrthoFinder
OrthoInspector
orthoMCL
Panther
Phylome
RoundUp
TreeFam
ZFIN
Alignment
Complementation?
Transgene?
Mmus\Fabp7
11 of 15
Yes
Yes
Mmus\Pmp2
10 of 15
No
Yes
Mmus\Fabp3
9 of 15
No
Yes
Mmus\Fabp4
9 of 15
No
Yes
Mmus\Fabp5
9 of 15
No
Yes
Mmus\Fabp9
9 of 15
No
Yes
Mmus\Fabp12
9 of 15
No
Yes
Mmus\Fabp6
3 of 15
No
Yes
Mmus\Crabp1
2 of 15
No
Yes
Mmus\Crabp2
2 of 15
No
Yes
Mmus\Fabp1
2 of 15
No
Yes
Mmus\Rbp1
2 of 15
No
Yes
Mmus\Rbp2
2 of 15
No
Yes
Mmus\Rbp7
2 of 15
No
Yes
Mmus\Fabp2
1 of 15
No
Yes
Rattus norvegicus (Norway rat) (15)
Rnor\Fabp7
10 of 13
Yes
Yes
Rnor\Pmp2
10 of 13
Yes
Yes
Rnor\Fabp9
9 of 13
No
Yes
Rnor\Fabp3
8 of 13
No
Yes
Rnor\Fabp4
8 of 13
No
Yes
Rnor\Fabp12
8 of 13
No
Yes
Rnor\Fabp5
7 of 13
No
Yes
Rnor\Fabp6
3 of 13
No
Yes
Rnor\Crabp1
2 of 13
No
Yes
Rnor\Crabp2
2 of 13
No
Yes
Rnor\Fabp1
2 of 13
No
Yes
Rnor\Rbp1
2 of 13
No
Yes
Rnor\Rbp2
2 of 13
No
Yes
Rnor\Rbp7
2 of 13
No
Yes
Rnor\Fabp2
1 of 13
No
Yes
Xenopus tropicalis (Western clawed frog) (14)
Xtro\fabp7
10 of 12
Yes
Yes
Xtro\pmp2
7 of 12
No
Yes
Xtro\fabp3
5 of 12
No
Yes
Xtro\fabp4
5 of 12
No
Yes
Xtro\LOC100495473
3 of 12
No
Yes
Xtro\crabp1
2 of 12
No
Yes
Xtro\crabp2
2 of 12
No
Yes
Xtro\fabp1
2 of 12
No
Yes
Xtro\rbp1
2 of 12
No
Yes
Xtro\rbp2
2 of 12
No
Yes
Xtro\rbp5
2 of 12
No
Yes
Xtro\fabp2
1 of 12
No
Yes
Xtro\fabp6
1 of 12
No
Yes
Xtro\LOC100145027
1 of 12
No
Yes
Danio rerio (Zebrafish) (23)
Drer\fabp3
10 of 15
Yes
Yes
Drer\fabp7b
10 of 15
Yes
Yes
Drer\fabp7a
8 of 15
No
Yes
Drer\fabp11a
8 of 15
No
Yes
Drer\fabp11b
7 of 15
No
Yes
Drer\fabp1a
3 of 15
No
Yes
Drer\fabp1b.1
3 of 15
No
Yes
Drer\fabp6
3 of 15
No
Yes
Drer\crabp1b
2 of 15
No
Yes
Drer\crabp2a
2 of 15
No
Yes
Drer\crabp2b
2 of 15
No
Yes
Drer\fabp1b.2
2 of 15
No
Yes
Drer\fabp10a
2 of 15
No
Yes
Drer\fabp10b
2 of 15
No
Yes
Drer\nmnat1
2 of 15
No
No
Drer\rbp1
2 of 15
No
Yes
Drer\rbp2a
2 of 15
No
Yes
Drer\rbp5
2 of 15
No
Yes
Drer\rbp7b
2 of 15
No
Yes
Drer\si:ch211-119o8.7
2 of 15
No
Yes
Drer\crabp1a
1 of 15
No
Yes
Drer\fabp2
1 of 15
No
Yes
Drer\rbp2b
1 of 15
No
Yes
Caenorhabditis elegans (Nematode, roundworm) (6)
Cele\lbp-5
10 of 15
Yes
Yes
Cele\lbp-6
8 of 15
No
Yes
Cele\lbp-7
7 of 15
No
Yes
Cele\lbp-8
7 of 15
No
Yes
Cele\lbp-9
6 of 15
No
Yes
Cele\lbp-3
1 of 15
No
Yes
Arabidopsis thaliana (thale-cress) (0)
No records found.
Saccharomyces cerevisiae (Brewer's yeast) (0)
No records found.
Schizosaccharomyces pombe (Fission yeast) (0)
No records found.
Orthologs in Drosophila Species (via OrthoDB v9.1) ( EOG09190J9H )
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly
Dmel\fabp
Drosophila suzukii
Spotted wing Drosophila
Dsuz\DS10_00010391
Drosophila simulans
Dsim\GD20655
Drosophila sechellia
Dsec\GM26093
Drosophila erecta
Dere\GG17215
Drosophila yakuba
Dyak\GE10108
Drosophila ananassae
Dana\GF16638
Drosophila pseudoobscura pseudoobscura
Dpse\GA26243
Drosophila persimilis
Dper\GL12263
Drosophila willistoni
Dwil\GK11787
Drosophila virilis
Dvir\GJ10051
Drosophila mojavensis
Dmoj\GI22452
Drosophila grimshawi
Dgri\GH15313
Orthologs in non-Drosophila Dipterans (via OrthoDB v9.1) ( EOG09150DTK )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Musca domestica
House fly
Mdoa\17022627
Musca domestica
House fly
Mdoa\17012635
Glossina morsitans
Tsetse fly
Gmor\GMOY011451
Mayetiola destructor
Hessian fly
Mdes\Mdes012421
Mayetiola destructor
Hessian fly
Mdes\Mdes012420
Mayetiola destructor
Hessian fly
Mdes\Mdes014501
Aedes aegypti
Yellow fever mosquito
Aaeg\AAEL005997
Anopheles darlingi
American malaria mosquito
Adar\ADAC004213
Anopheles gambiae
Malaria mosquito
Agam\FABP_ANOGA_b
Anopheles gambiae
Malaria mosquito
Agam\FABP_ANOGA_b
Culex quinquefasciatus
Southern house mosquito
Cqui\CPIJ018993
Culex quinquefasciatus
Southern house mosquito
Cqui\CPIJ013698
Orthologs in non-Dipteran Insects (via OrthoDB v9.1) ( EOG090W0GYL )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Bombyx mori
Silkmoth
Bmor\BGIBMGA013111
Bombyx mori
Silkmoth
Bmor\BGIBMGA012942
Danaus plexippus
Monarch butterfly
Dple\DPOGS206997-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS207013-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS206980-PA
Heliconius melpomene
Postman butterfly
Hmel\HMEL002112
Heliconius melpomene
Postman butterfly
Hmel\HMEL002124
Apis florea
Little honeybee
Aflo\3543175444
Apis mellifera
Western honey bee
Amel\Fabp
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP16972
Bombus terrestris
Buff-tailed bumblebee
Bter\15214970
Linepithema humile
Argentine ant
Lhum\LH21030
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:000e5e
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG007997
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_11236
Tribolium castaneum
Red flour beetle
Tcas\GLEAN_15275
Pediculus humanus
Human body louse
Phum\PHUM240020
Pediculus humanus
Human body louse
Phum\PHUM587770
Rhodnius prolixus
Kissing bug
Rpro\RPRC005040
Cimex lectularius
Bed bug
Clec\CLEC007408
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI009011
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI008871
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI000772
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_10239
Orthologs in non-Insect Arthropods (via OrthoDB v9.1) ( EOG090X0H07 )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Strigamia maritima
European centipede
Smar\SMAR009276
Ixodes scapularis
Black-legged tick
Isca\ISCW015316
Stegodyphus mimosarum
African social velvet spider
Smim\KFM62498.1
Stegodyphus mimosarum
African social velvet spider
Smim\KFM60507.1
Tetranychus urticae
Two-spotted spider mite
Turt\tetur04g05930
Tetranychus urticae
Two-spotted spider mite
Turt\tetur06g05820
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_300446
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_300850
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_270045
Orthologs in non-Arthropod Metazoa (via OrthoDB v9.1) ( EOG091G0QSV )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Strongylocentrotus purpuratus
Purple sea urchin
Spur\SPU_004345gn
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Rbp2
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Crabp1
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Rbp1
Strongylocentrotus purpuratus
Purple sea urchin
Spur\SPU_027098gn
Strongylocentrotus purpuratus
Purple sea urchin
Spur\SPU_014298gn
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Rbp1_1
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Rbp1b
Ciona intestinalis
Vase tunicate
Cint\ENSCING00000014756
Ciona intestinalis
Vase tunicate
Cint\LOC100177703
Ciona intestinalis
Vase tunicate
Cint\LOC100186791
Gallus gallus
Domestic chicken
Ggal\RBP5
Gallus gallus
Domestic chicken
Ggal\FABP2
Gallus gallus
Domestic chicken
Ggal\ENSGALG00000029140
Gallus gallus
Domestic chicken
Ggal\FABP7
Gallus gallus
Domestic chicken
Ggal\ENSGALG00000027820
Gallus gallus
Domestic chicken
Ggal\NMNAT1
Gallus gallus
Domestic chicken
Ggal\FABP4
Gallus gallus
Domestic chicken
Ggal\FABP5
Gallus gallus
Domestic chicken
Ggal\CRABP1
Gallus gallus
Domestic chicken
Ggal\RBP2
Gallus gallus
Domestic chicken
Ggal\PMP2
Gallus gallus
Domestic chicken
Ggal\FABP3
Paralogs
Downloads
Download All DIOPT Paralogs
Paralogs (via DIOPT v7.1)
Drosophila melanogaster (Fruit fly) (0)
No records found.
Human Disease Associations
FlyBase Human Disease Model Reports
    Disease Model Summary Ribbon
    Disease Ontology (DO) Annotations
    Models Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Evidence
    References
    Potential Models Based on Orthology ( 0 )
    Human Ortholog
    Disease
    Evidence
    References
    Modifiers Based on Experimental Evidence ( 1 )
    Allele
    Disease
    Interaction
    References
    fabphs.PG
    ameliorates  Alzheimer's disease
    modeled by Hsap\APPAβ42.UAS.Tag:SS(rPENK)
    (Gerstner et al., 2017)
    Disease Associations of Human Orthologs (via DIOPT v7.1 and OMIM)
    Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
    Homo sapiens (Human)
    Gene name
    Score
    OMIM
    OMIM Phenotype
    DO term
    Complementation?
    Transgene?
    FABP7; fatty acid binding protein 7
    11 of 15
    602965
         
        PMP2; peripheral myelin protein 2
        11 of 15
        170715
           
          FABP3; fatty acid binding protein 3
          10 of 15
          134651
               
              FABP4; fatty acid binding protein 4
              9 of 15
              600434
                   
                  FABP5; fatty acid binding protein 5
                  9 of 15
                  605168
                      FABP9; fatty acid binding protein 9
                      9 of 15
                           
                          FABP12; fatty acid binding protein 12
                          9 of 15
                              FABP1; fatty acid binding protein 1
                              3 of 15
                              134650
                                  FABP6; fatty acid binding protein 6
                                  3 of 15
                                  600422
                                      Functional Complementation Data
                                      Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
                                      Interactions
                                      Summary of Physical Interactions
                                      esyN Network Diagram
                                      Show neighbor-neighbor interactions:
                                      Select Layout:
                                      Legend:
                                      Protein
                                      RNA
                                      Selected Interactor(s)
                                      Interactions Browser
                                      View in Interactions Browser
                                      Please see the Physical Interaction reports below for full details
                                      protein-protein
                                      Physical Interaction
                                      Assay
                                      References
                                      fabp - Akap200
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Akr1B
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Ald1
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - AnxB10
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Bacc
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - CG10265
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - CG10638
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - CG11247
                                      anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based
                                      (Rhee et al., 2014)
                                      fabp - CG11267
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - CG11771
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - CG14715
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - CG2852
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - CG3226
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - CG4598
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - CG5355
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - CG7386
                                      anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based
                                      (Rhee et al., 2014)
                                      fabp - CG8036
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - CG8993
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - CG9705
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Calr
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Chd64
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Cyp1
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Df31
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - ERp60
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Eb1
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - EndoGI
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Eno
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Fkbp12
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Fkbp14
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Fkbp59
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Glo1
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - GstE6
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - GstO3
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - HINT1
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - HmgD
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Inos
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Mdh2
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Moe
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Nacα
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Nlp
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Nrd1
                                      anti tag coimmunoprecipitation, Identification by mass spectrometry
                                      (Yoon et al., 2017)
                                      fabp - Ntf-2
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - PCNA
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - PHDP
                                      anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based
                                      (Rhee et al., 2014)
                                      fabp - PHGPx
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Pdi
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Pgd
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Pglym78
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Prx2540-2
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - RhoGDI
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Sh3β
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Sod1
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Stip1
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - TER94
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Tctp
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Trx-2
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - Uch
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - ZIPIC
                                      anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based
                                      (Rhee et al., 2014)
                                      fabp - awd
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - capt
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - chic
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - cib
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - dod
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - eEF2
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - eEF5
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - gsb-n
                                      anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based
                                      (Rhee et al., 2014)
                                      fabp - p23
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - regucalcin
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - scf
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - scu
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - smt3
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      fabp - sturkopf
                                      split luciferase complementation, luminiscence technology
                                      (Kolkhof et al., 2017)
                                      fabp - yip2
                                      experimental knowledge based
                                      (Guruharsha et al., 2011)
                                      Summary of Genetic Interactions
                                      esyN Network Diagram
                                      Starting gene(s)
                                      Interaction type
                                      Interacting gene(s)
                                      Reference
                                      Starting gene(s)
                                      Interaction type
                                      Interacting gene(s)
                                      Reference
                                      External Data
                                      Linkouts
                                      DroID - A comprehensive database of gene and protein interactions.
                                      InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.
                                      MIST (protein-protein) - An integrated Molecular Interaction Database
                                      Pathways
                                      Signaling Pathways (FlyBase)
                                      Metabolic Pathways
                                      External Data
                                      Genomic Location and Detailed Mapping Data
                                      Chromosome (arm)
                                      3R
                                      Recombination map

                                      3-51

                                      Cytogenetic map
                                      86E10-86E10
                                      Sequence location
                                      3R:11,559,896..11,567,054 [-]
                                      FlyBase Computed Cytological Location
                                      Cytogenetic map
                                      Evidence for location
                                      86E10-86E10
                                      Limits computationally determined from genome sequence between P{PZ}tho1&P{PZ}l(3)0462905275 and P{EP}Lk6EP886
                                      Experimentally Determined Cytological Location
                                      Cytogenetic map
                                      Notes
                                      References
                                      Experimentally Determined Recombination Data
                                      Location

                                      3-51

                                      (FlyBase, 2016)

                                      3-48.5

                                      (Comeron et al., 2012)
                                      Left of (cM)
                                      Right of (cM)
                                      Notes
                                      Stocks and Reagents
                                      Stocks (7)
                                      Genomic Clones (19)
                                      cDNA Clones (377)
                                       

                                      Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

                                      cDNA clones, fully sequences
                                      BDGP DGC clones
                                      Other clones
                                      Drosophila Genomics Resource Center cDNA clones

                                      For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

                                      cDNA Clones, End Sequenced (ESTs)
                                      BDGP DGC clones
                                      Other clones
                                      RNAi and Array Information
                                      Linkouts
                                      DRSC - Results frm RNAi screens
                                      GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents
                                      Antibody Information
                                      Laboratory Generated Antibodies
                                       

                                      polyclonal

                                      (Kis et al., 2015, Gerstner et al., 2011)
                                      Commercially Available Antibodies
                                       
                                      Other Information
                                      Relationship to Other Genes
                                      Source for database identify of

                                      Source for identity of: fabp CG6783

                                      (Gerstner et al., 2011)
                                      Source for database merge of

                                      Source for merge of: CG6783 anon- EST:Posey234

                                      (Bayraktaroglu, 2000.11.2)

                                      Source for merge of: CG6783 BcDNA:RH06221 BcDNA:RH49003 BcDNA:SD12036

                                      (FlyBase, 1996-)

                                      Source for merge of: CG6783 BcDNA:RH46282

                                      (FlyBase, 1996-)
                                      Additional comments

                                      Dicistronic annotation CG31305 split out into separate annotations for each open reading frame, CG6783 and CG6782 in release 4.2 of the genome annotation.

                                      (FlyBase Genome Annotators, 2005)

                                      One or more of the processed transcripts for this gene contain(s) two non-overlapping open reading frames (ORFs). The non-overlapping ORFs are represented by CG6783 and sea.

                                      (FlyBase Genome Annotators, 2002-2003)
                                      Other Comments

                                      fabp-mediated long-term memory enhancement occurs during the consolidation period and is not due to effects on learning, acquisition or recall.

                                      (Gerstner et al., 2011)

                                      Nonsense-mediated mRNA decay (NMD) down-regulates a distinct splice isoform(s) of this gene.

                                      (Hansen et al., 2009)

                                      Area matching Drosophila EST AI062640.

                                      (Davies, 2001.3.15)
                                      Origin and Etymology
                                      Discoverer
                                      Etymology
                                      Identification
                                      External Crossreferences and Linkouts ( 70 )
                                      Sequence Crossreferences
                                      NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
                                      GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
                                      GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
                                      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
                                      UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information
                                      Other crossreferences
                                      Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones
                                      Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
                                      Flygut - An atlas of the Drosophila adult midgut
                                      GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents
                                      InterPro - A database of protein families, domains and functional sites
                                      KEGG Genes - Molecular building blocks of life in the genomic space.
                                      modMine - A data warehouse for the modENCODE project
                                      Linkouts
                                      DPiM - Drosophila Protein interaction map
                                      DroID - A comprehensive database of gene and protein interactions.
                                      DRSC - Results frm RNAi screens
                                      FLIGHT - Cell culture data for RNAi and other high-throughput technologies
                                      FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
                                      FlyCyc Genes - Genes from a BioCyc PGDB for Dmel
                                      FlyMine - An integrated database for Drosophila genomics
                                      InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.
                                      MIST (protein-protein) - An integrated Molecular Interaction Database
                                      Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.
                                      Synonyms and Secondary IDs (17)
                                      Reported As
                                      Symbol Synonym
                                      BcDNA:RH06221
                                      BcDNA:RH46282
                                      BcDNA:RH49003
                                      BcDNA:SD12036
                                      CG31305
                                      (Hansen et al., 2009, Hughes et al., 2008, Quinones-Coello, 2007, Burgler and Macdonald, 2005, Giot et al., 2003)
                                      CG31305-PI
                                      (de Morais Guedes et al., 2003)
                                      CG6783
                                      (Kolkhof et al., 2017, Japanese National Institute of Genetics, 2012.5.21, Lee et al., 2012, Cammarato et al., 2011, Gerstner et al., 2011, Napoletano et al., 2011, Knowles-Barley et al., 2010, Ni et al., 2010.12.1, Li et al., 2009, Beckervordersandforth et al., 2008, Buszczak et al., 2007, Quinones-Coello, 2007, Altenhein et al., 2006, Sambandan et al., 2006)
                                      CT21061
                                      (Ceriani et al., 2002)
                                      FABP
                                      (Lee et al., 2012)
                                      anon-EST:Posey234
                                      anon-WO0140519.12
                                      dFabp
                                      (Gerstner et al., 2017, Dissel et al., 2015, Ishimoto et al., 2012, Gerstner et al., 2011, Gerstner et al., 2011)
                                      fabp
                                      (Mathiyalagan et al., 2019, Yoon et al., 2017, Altenhein et al., 2016, Khan et al., 2015, Ahn et al., 2014, Beckett et al., 2013, Paik et al., 2012, Winbush et al., 2012)
                                      Name Synonyms
                                      fatty acid bindin protein
                                      fatty acid binding protein
                                      (Dissel et al., 2015)
                                      fatty-acid binding protein
                                      (Gerstner et al., 2011)
                                      fatty-acid-binding protein
                                      (Lee et al., 2012)
                                      Secondary FlyBase IDs
                                      • FBgn0025540
                                      • FBgn0044763
                                      • FBgn0051305
                                      • FBgn0064779
                                      • FBgn0064804
                                      • FBgn0064806
                                      • FBgn0064848
                                      • FBtr0089774
                                      • FBpp0088715
                                      • FBtr0089775
                                      • FBpp0088716
                                      • FBtr0089776
                                      • FBpp0088717
                                      • FBtr0089777
                                      • FBpp0088718
                                      • FBtr0089778
                                      • FBpp0088719
                                      • FBtr0089779
                                      • FBpp0088720
                                      • FBtr0089780
                                      • FBpp0088721
                                      Datasets (0)
                                      Study focus (0)
                                      Experimental Role
                                      Project
                                      Project Type
                                      Title
                                      References (76)