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Gene Dmel\CG18476

General Information
Symbol	Dmel\CG18476	Species	D. melanogaster
Name		Annotation symbol	CG18476
Feature type	protein_coding_gene	FlyBase ID	FBgn0037931
Gene Model Status	Current	Stock availability	3 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	86E15-86E15	Sequence location	3R:7,500,642..7,503,835 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG18476 (FBgn0037931). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: zinc ion binding; nucleic acid binding. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Zinc finger, AD-type; Zinc finger, C2H2; Zinc finger, C2H2-like; Zinc finger, C2H2-type/integrase, DNA-binding. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed within 00-18 hour embryonic stages, at stages throughout the pupal period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. Comments on Affy2 ProbeSet: ProbeSet 1635319_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG18476. Gene sequence location is 3R:7500642..7503835.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features HFA15281 BKN45074 BKN26609
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 86E15-86E15   Limits computationally determined from genome sequence between P{PZ}tho1&P{PZ}l(3)0462905275 and P{EP}Lk6EP886
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG18476 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	DGC clone appears problematic (GH20378): incomplete CDS.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG18476-RA FBtr0082443  NM_169419   2943   936
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG18476-PA   FBpp0081919   109.1   936   8.15     NP_731615   AAF54675
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, C2H2 (IPR007087) Zinc finger, AD-type (IPR012934) Zinc finger, C2H2-type/integrase, DNA-binding (IPR013087) Zinc finger, C2H2-like (IPR015880)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA392248   AE014297 AAF54675   AI387312   AI389251   AW940780   AY070515 AAL47986   BF495693   BF497140   BI163881   BI236648   BI366834   BT016102 AAV36987   BT022176   BT023705   BT023708   BT050458   CO277290   CO343088   EC243656   EC258443
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8SZT7 Q9VGK1
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0037931    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0037931 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed within 00-18 hour embryonic stages, at stages throughout the pupal period, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0037931 expression level Developmental Stage   Expression Level embryo 00-02hr    1021 embryo 02-04hr    634 embryo 04-06hr    671 embryo 06-08hr    845 embryo 08-10hr    797 embryo 10-12hr    656 embryo 12-14hr    562 embryo 14-16hr    427 embryo 16-18hr    338 embryo 18-20hr    327 embryo 20-22hr    295 embryo 22-24hr    333 larva L1    274 larva L2    195 larva L3 12hr old    145 larva L3 puffstage 1-2    206 larva L3 puffstage 3-6    306 larva L3 puffstage 7-9    374 white prepupae new    372 white prepupae 12hr    492 white prepupae 24hr    634 pupae 2d postWPP    442 pupae 3d postWPP    263 pupae 4d postWPP    284 adult male 01day    298 adult male 05day    366 adult male 30day    428 adult female 01day    420 adult female 05day    628 adult female 30day    649 Expression Level Scale  None   Extremely low   Very low   Low   Moderate  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1021) embryo 02-04hr  (634) embryo 04-06hr  (671) embryo 06-08hr  (845) embryo 08-10hr  (797) embryo 10-12hr  (656) embryo 12-14hr  (562) embryo 14-16hr  (427) embryo 16-18hr  (338) embryo 18-20hr  (327) embryo 20-22hr  (295) embryo 22-24hr  (333) larva L1  (274) larva L2  (195) larva L3 12hr old  (145) larva L3 puffstage 1-2  (206) larva L3 puffstage 3-6  (306) larva L3 puffstage 7-9  (374) white prepupae new  (372) white prepupae 12hr  (492) white prepupae 24hr  (634) pupae 2d postWPP  (442) pupae 3d postWPP  (263) pupae 4d postWPP  (284) adult male 01day  (298) adult male 05day  (366) adult male 30day  (428) adult female 01day  (420) adult female 05day  (628) adult female 30day  (649) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1021 embryo 02-04hr    634 embryo 04-06hr    671 embryo 06-08hr    845 embryo 08-10hr    797 embryo 10-12hr    656 embryo 12-14hr    562 embryo 14-16hr    427 embryo 16-18hr    338 embryo 18-20hr    327 embryo 20-22hr    295 embryo 22-24hr    333 larva L1    274 larva L2    195 larva L3 12hr old    145 larva L3 puffstage 1-2    206 larva L3 puffstage 3-6    306 larva L3 puffstage 7-9    374 white prepupae new    372 white prepupae 12hr    492 white prepupae 24hr    634 pupae 2d postWPP    442 pupae 3d postWPP    263 pupae 4d postWPP    284 adult male 01day    298 adult male 05day    366 adult male 30day    428 adult female 01day    420 adult female 05day    628 adult female 30day    649 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1021 embryo 02-04hr    634 embryo 04-06hr    671 embryo 06-08hr    845 embryo 08-10hr    797 embryo 10-12hr    656 embryo 12-14hr    562 embryo 14-16hr    427 embryo 16-18hr    338 embryo 18-20hr    327 embryo 20-22hr    295 embryo 22-24hr    333 larva L1    274 larva L2    195 larva L3 12hr old    145 larva L3 puffstage 1-2    206 larva L3 puffstage 3-6    306 larva L3 puffstage 7-9    374 white prepupae new    372 white prepupae 12hr    492 white prepupae 24hr    634 pupae 2d postWPP    442 pupae 3d postWPP    263 pupae 4d postWPP    284 adult male 01day    298 adult male 05day    366 adult male 30day    428 adult female 01day    420 adult female 05day    628 adult female 30day    649 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1021 embryo 02-04hr    634 embryo 04-06hr    671 embryo 06-08hr    845 embryo 08-10hr    797 embryo 10-12hr    656 embryo 12-14hr    562 embryo 14-16hr    427 embryo 16-18hr    338 embryo 18-20hr    327 embryo 20-22hr    295 embryo 22-24hr    333 larva L1    274 larva L2    195 larva L3 12hr old    145 larva L3 puffstage 1-2    206 larva L3 puffstage 3-6    306 larva L3 puffstage 7-9    374 white prepupae new    372 white prepupae 12hr    492 white prepupae 24hr    634 pupae 2d postWPP    442 pupae 3d postWPP    263 pupae 4d postWPP    284 adult male 01day    298 adult male 05day    366 adult male 30day    428 adult female 01day    420 adult female 05day    628 adult female 30day    649 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0037931 expression level Developmental Stage   Expression Level embryo 00-02hr    1021 embryo 02-04hr    634 embryo 04-06hr    671 embryo 06-08hr    845 embryo 08-10hr    797 embryo 10-12hr    656 embryo 12-14hr    562 embryo 14-16hr    427 embryo 16-18hr    338 embryo 18-20hr    327 embryo 20-22hr    295 embryo 22-24hr    333 larva L1    274 larva L2    195 larva L3 12hr old    145 larva L3 puffstage 1-2    206 larva L3 puffstage 3-6    306 larva L3 puffstage 7-9    374 white prepupae new    372 white prepupae 12hr    492 white prepupae 24hr    634 pupae 2d postWPP    442 pupae 3d postWPP    263 pupae 4d postWPP    284 adult male 01day    298 adult male 05day    366 adult male 30day    428 adult female 01day    420 adult female 05day    628 adult female 30day    649 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1021) embryo 02-04hr  (634) embryo 04-06hr  (671) embryo 06-08hr  (845) embryo 08-10hr  (797) embryo 10-12hr  (656) embryo 12-14hr  (562) embryo 14-16hr  (427) embryo 16-18hr  (338) embryo 18-20hr  (327) embryo 20-22hr  (295) embryo 22-24hr  (333) larva L1  (274) larva L2  (195) larva L3 12hr old  (145) larva L3 puffstage 1-2  (206) larva L3 puffstage 3-6  (306) larva L3 puffstage 7-9  (374) white prepupae new  (372) white prepupae 12hr  (492) white prepupae 24hr  (634) pupae 2d postWPP  (442) pupae 3d postWPP  (263) pupae 4d postWPP  (284) adult male 01day  (298) adult male 05day  (366) adult male 30day  (428) adult female 01day  (420) adult female 05day  (628) adult female 30day  (649) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1021 embryo 02-04hr    634 embryo 04-06hr    671 embryo 06-08hr    845 embryo 08-10hr    797 embryo 10-12hr    656 embryo 12-14hr    562 embryo 14-16hr    427 embryo 16-18hr    338 embryo 18-20hr    327 embryo 20-22hr    295 embryo 22-24hr    333 larva L1    274 larva L2    195 larva L3 12hr old    145 larva L3 puffstage 1-2    206 larva L3 puffstage 3-6    306 larva L3 puffstage 7-9    374 white prepupae new    372 white prepupae 12hr    492 white prepupae 24hr    634 pupae 2d postWPP    442 pupae 3d postWPP    263 pupae 4d postWPP    284 adult male 01day    298 adult male 05day    366 adult male 30day    428 adult female 01day    420 adult female 05day    628 adult female 30day    649 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1021 embryo 02-04hr    634 embryo 04-06hr    671 embryo 06-08hr    845 embryo 08-10hr    797 embryo 10-12hr    656 embryo 12-14hr    562 embryo 14-16hr    427 embryo 16-18hr    338 embryo 18-20hr    327 embryo 20-22hr    295 embryo 22-24hr    333 larva L1    274 larva L2    195 larva L3 12hr old    145 larva L3 puffstage 1-2    206 larva L3 puffstage 3-6    306 larva L3 puffstage 7-9    374 white prepupae new    372 white prepupae 12hr    492 white prepupae 24hr    634 pupae 2d postWPP    442 pupae 3d postWPP    263 pupae 4d postWPP    284 adult male 01day    298 adult male 05day    366 adult male 30day    428 adult female 01day    420 adult female 05day    628 adult female 30day    649 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1021 embryo 02-04hr    634 embryo 04-06hr    671 embryo 06-08hr    845 embryo 08-10hr    797 embryo 10-12hr    656 embryo 12-14hr    562 embryo 14-16hr    427 embryo 16-18hr    338 embryo 18-20hr    327 embryo 20-22hr    295 embryo 22-24hr    333 larva L1    274 larva L2    195 larva L3 12hr old    145 larva L3 puffstage 1-2    206 larva L3 puffstage 3-6    306 larva L3 puffstage 7-9    374 white prepupae new    372 white prepupae 12hr    492 white prepupae 24hr    634 pupae 2d postWPP    442 pupae 3d postWPP    263 pupae 4d postWPP    284 adult male 01day    298 adult male 05day    366 adult male 30day    428 adult female 01day    420 adult female 05day    628 adult female 30day    649 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0037931    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0037931 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0037931 expression level Tissue   Expression Level Larval Central Nervous System    32.125 Larval Midgut    1.9 Larval Hindgut    5.3 Larval Malpighian Tubules    4 Larval Fat Body    7 Larval Salivary Gland no informative data Larval Trachea no informative data Larval Carcass    3.675 Adult Head no informative data Adult Eye    24.275 Adult Brain no informative data Adult Thoracic-Abdominal Ganglion no informative data Adult Crop no informative data Adult Midgut    2.3 Adult Hindgut no informative data Adult Malpighian Tubules    5.9 Adult Fat Body    1.8 Adult Salivary Gland no informative data Adult Heart    7.8 Adult VirginFemale Spermatheca    3.3 Adult InseminatedFemale Spermatheca    4.1 Adult Ovary no informative data Adult Testis    8.8 Adult Male Accessory Gland no informative data Adult Carcass    6.7 Expression Level Scale  None   Low  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    32.125 Larval Midgut    1.9 Larval Hindgut    5.3 Larval Malpighian Tubules    4 Larval Fat Body    7 Larval Salivary Gland no informative data Larval Trachea no informative data Larval Carcass    3.675 Adult Head no informative data Adult Eye    24.275 Adult Brain no informative data Adult Thoracic-Abdominal Ganglion no informative data Adult Crop no informative data Adult Midgut    2.3 Adult Hindgut no informative data Adult Malpighian Tubules    5.9 Adult Fat Body    1.8 Adult Salivary Gland no informative data Adult Heart    7.8 Adult VirginFemale Spermatheca    3.3 Adult InseminatedFemale Spermatheca    4.1 Adult Ovary no informative data Adult Testis    8.8 Adult Male Accessory Gland no informative data Adult Carcass    6.7 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    32.125 Larval Midgut    1.9 Larval Hindgut    5.3 Larval Malpighian Tubules    4 Larval Fat Body    7 Larval Salivary Gland no informative data Larval Trachea no informative data Larval Carcass    3.675 Adult Head no informative data Adult Eye    24.275 Adult Brain no informative data Adult Thoracic-Abdominal Ganglion no informative data Adult Crop no informative data Adult Midgut    2.3 Adult Hindgut no informative data Adult Malpighian Tubules    5.9 Adult Fat Body    1.8 Adult Salivary Gland no informative data Adult Heart    7.8 Adult VirginFemale Spermatheca    3.3 Adult InseminatedFemale Spermatheca    4.1 Adult Ovary no informative data Adult Testis    8.8 Adult Male Accessory Gland no informative data Adult Carcass    6.7 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    32.125 Larval Midgut    1.9 Larval Hindgut    5.3 Larval Malpighian Tubules    4 Larval Fat Body    7 Larval Salivary Gland no informative data Larval Trachea no informative data Larval Carcass    3.675 Adult Head no informative data Adult Eye    24.275 Adult Brain no informative data Adult Thoracic-Abdominal Ganglion no informative data Adult Crop no informative data Adult Midgut    2.3 Adult Hindgut no informative data Adult Malpighian Tubules    5.9 Adult Fat Body    1.8 Adult Salivary Gland no informative data Adult Heart    7.8 Adult VirginFemale Spermatheca    3.3 Adult InseminatedFemale Spermatheca    4.1 Adult Ovary no informative data Adult Testis    8.8 Adult Male Accessory Gland no informative data Adult Carcass    6.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0037931 expression level Tissue   Expression Level Larval Central Nervous System    32.125 Larval Midgut    1.9 Larval Hindgut    5.3 Larval Malpighian Tubules    4 Larval Fat Body    7 Larval Salivary Gland no informative data Larval Trachea no informative data Larval Carcass    3.675 Adult Head no informative data Adult Eye    24.275 Adult Brain no informative data Adult Thoracic-Abdominal Ganglion no informative data Adult Crop no informative data Adult Midgut    2.3 Adult Hindgut no informative data Adult Malpighian Tubules    5.9 Adult Fat Body    1.8 Adult Salivary Gland no informative data Adult Heart    7.8 Adult VirginFemale Spermatheca    3.3 Adult InseminatedFemale Spermatheca    4.1 Adult Ovary no informative data Adult Testis    8.8 Adult Male Accessory Gland no informative data Adult Carcass    6.7 Expression Level Scale  None   Low  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    32.125 Larval Midgut    1.9 Larval Hindgut    5.3 Larval Malpighian Tubules    4 Larval Fat Body    7 Larval Salivary Gland no informative data Larval Trachea no informative data Larval Carcass    3.675 Adult Head no informative data Adult Eye    24.275 Adult Brain no informative data Adult Thoracic-Abdominal Ganglion no informative data Adult Crop no informative data Adult Midgut    2.3 Adult Hindgut no informative data Adult Malpighian Tubules    5.9 Adult Fat Body    1.8 Adult Salivary Gland no informative data Adult Heart    7.8 Adult VirginFemale Spermatheca    3.3 Adult InseminatedFemale Spermatheca    4.1 Adult Ovary no informative data Adult Testis    8.8 Adult Male Accessory Gland no informative data Adult Carcass    6.7 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    32.125 Larval Midgut    1.9 Larval Hindgut    5.3 Larval Malpighian Tubules    4 Larval Fat Body    7 Larval Salivary Gland no informative data Larval Trachea no informative data Larval Carcass    3.675 Adult Head no informative data Adult Eye    24.275 Adult Brain no informative data Adult Thoracic-Abdominal Ganglion no informative data Adult Crop no informative data Adult Midgut    2.3 Adult Hindgut no informative data Adult Malpighian Tubules    5.9 Adult Fat Body    1.8 Adult Salivary Gland no informative data Adult Heart    7.8 Adult VirginFemale Spermatheca    3.3 Adult InseminatedFemale Spermatheca    4.1 Adult Ovary no informative data Adult Testis    8.8 Adult Male Accessory Gland no informative data Adult Carcass    6.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    32.125 Larval Midgut    1.9 Larval Hindgut    5.3 Larval Malpighian Tubules    4 Larval Fat Body    7 Larval Salivary Gland no informative data Larval Trachea no informative data Larval Carcass    3.675 Adult Head no informative data Adult Eye    24.275 Adult Brain no informative data Adult Thoracic-Abdominal Ganglion no informative data Adult Crop no informative data Adult Midgut    2.3 Adult Hindgut no informative data Adult Malpighian Tubules    5.9 Adult Fat Body    1.8 Adult Salivary Gland no informative data Adult Heart    7.8 Adult VirginFemale Spermatheca    3.3 Adult InseminatedFemale Spermatheca    4.1 Adult Ovary no informative data Adult Testis    8.8 Adult Male Accessory Gland no informative data Adult Carcass    6.7 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland no informative data Larval Trachea no informative data Larval Carcass     Adult Head no informative data Adult Eye     Adult Brain no informative data Adult Thoracic-Abdominal Ganglion no informative data Adult Crop no informative data Adult Midgut     Adult Hindgut no informative data Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland no informative data Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary no informative data Adult Testis     Adult Male Accessory Gland no informative data Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    no informative data   NA  Eye    24.275   NA  Brain    no informative data   32.125  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    no informative data   NA  Crop    no informative data   1.9  Midgut    2.3   5.3  Hindgut    no informative data   4  Malpighian Tubules    5.9   7  Fat Body    1.8   no informative data  Salivary Gland    no informative data   NA  Heart    7.8   no informative data  Trachea    NA   NA  VirginFemale Spermatheca    3.3   NA  InseminatedFemale Spermatheca    4.1   NA  Ovary    no informative data   NA  Testis    8.8   NA  Male Accessory Gland    no informative data   3.675  Carcass    6.7 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_01
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037931 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG18476-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG18476 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 7-8 Stages(s) 9-10 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG18476GD1692 Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CG18476 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG18476 Class Mutagen Stocks Known lesion CG18476GD1692 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG18476JF02250 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG18476KK106609 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel7309 (Ryder, 2004.4.26) Df(3R)Exel8154 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD1692} NA P{KK106609} NA P{TRiP.JF02250} NA
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
nucleic acid binding inferred from electronic annotation with InterPro:IPR013087 (FlyBase Curators et al., 2004-) zinc ion binding inferred from electronic annotation with InterPro:IPR007087, InterPro:IPR012934, InterPro:IPR015880 (FlyBase Curators et al., 2004-)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
nucleus inferred from electronic annotation with InterPro:IPR012934 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG18476 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 66531 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0037931 DroID - A comprehensive database of gene and protein interactions. • FBgn0037931 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 41404
Orthologs
Genome-wide drosophilid orthologs	Dana\GF16627 Dere\GG17206 Dgri\GH19322 Dmoj\GI23545 Dper\GL12260 Dpse\GA14950 Dsec\GM26084 Dsim\GD20647 Dvir\GJ10292 Dwil\GK11228 Dyak\GE10099
Curated drosophilid orthologs	Dpse\GA14950
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL010813-PA Aedes aegypti (mosquito) 165476 Lottia gigantea (owl limpet) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0227981 FBgn0213239 FBgn0197578 FBgn0192113 FBgn0180939 FBgn0074976 FBgn0149867 FBgn0146271 FBgn0126787 FBgn0109433 FBgn0093648 CPIJ011863 CPIJ011859 CPIJ009503 AAEL010813
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
Bloomington	26710 y1 v1; P{TRiP.JF02250}attP2
VDRC	v108328 P{KK106609}VIE-260B v6527 w1118; P{GD1692}v6527/TM3
Genomic Clones ( 1 )
	BACR11G22 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 18 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GH20378 IP01261 IP01262 IP01263 LD23980
Other clones	DPiM_IP01261 FI03704
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT04654 AT11236 GH17811 LD11058 RE03406 RE32729 RE52454
Other clones	4766 214215.39 EK123734 EP16063
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0037931 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41404
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG17822 CG18476 (Whitfield, 2000.5.4)
Additional comments	Release 1 annotation CG17822 corresponds to part of release 3.2 annotation CG18476. (FlyBase, 1996-)
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_169419 RefSeq (Proteins) • NP_731615 DDBJ / EMBL / GenBank • AAF54675 AAL47986 AAV36987 AI389251 AW940780 AY070515 BT016102 Entrez Gene - A searchable database of RefSeq genes. • 41404 UniProtKB/TrEMBL • Q8SZT7 Q9VGK1
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, C2H2 (IPR007087) Zinc finger, AD-type (IPR012934) Zinc finger, C2H2-type/integrase, DNA-binding (IPR013087) Zinc finger, C2H2-like (IPR015880)
Linkouts
	BioGRID - A database of protein and genetic interactions • 66531 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0037931 DroID - A comprehensive database of gene and protein interactions. • FBgn0037931 DRSC - Results from RNAi screens. • FBgn0037931 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037931 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG18476-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0037931 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41404 InParanoid A subset of ortholog calls from InParanoid. • AAEL010813-PA Aedes aegypti (mosquito) 165476 Lottia gigantea (owl limpet) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 41404 modMine - Data generated by the modENCODE project. • FBgn0037931 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0227981 FBgn0213239 FBgn0197578 FBgn0192113 FBgn0180939 FBgn0074976 FBgn0149867 FBgn0146271 FBgn0126787 FBgn0109433 FBgn0093648 CPIJ011863 CPIJ011859 CPIJ009503 AAEL010813
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	CG17822   CG18476 (Hoskins et al., 2005, Perkins et al., 2009.3.31, Keleman et al., 2009.8.5)
Name Synonym
Secondary FlyBase IDs
	FBgn0037932
References ( 15 )
Research paper	Hoskins et al., 2005, Nucleic Acids Res. 33(21): e185 Rapid and efficient cDNA library screening by self-ligation of inverse PCR products (SLIP). [FBrf0191341]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Perkins et al., 2009.3.31, TRiP stock collection set 2. TRiP stock collection set 2. [FBrf0207631] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335] Whitfield, 2000.5.4, FlyBase error report for CG17822 on Thu May 4 02:22:31 2000. FlyBase error report for CG17822 on Thu May 4 02:22:31 2000. [FBrf0129030]
FlyBase analysis	FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946] FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]
Curated genome annotation	Li, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126682]