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Gene Dmel\CG10005

General Information
Symbol	Dmel\CG10005	Species	D. melanogaster
Name		Annotation symbol	CG10005
Feature type	protein_coding_gene	FlyBase ID	FBgn0037972
Gene Model Status	Current	Stock availability	3 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	87A4-87A4	Sequence location	3R:7,800,878..7,802,912 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG10005 (FBgn0037972). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Zona pellucida sperm-binding protein. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression. Peak expression observed at stages throughout the pupal period. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval hindgut, larval trachea, larval carcass. Comments on Affy2 ProbeSet: ProbeSet 1640658_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG10005. Gene sequence location is 3R:7800878..7802912.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10	References FlyBase Curators, 2010-, Gene Ontology (GO) annotation review.
FB2012_01	Sequence features HFA14172 BKN29696
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 87A4-87A4   Limits computationally determined from genome sequence between P{EP}Lk6EP886 and P{PZ}svp07842
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG10005 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG10005-RA FBtr0082507  NM_141880   1048   231
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG10005-PA   FBpp0081981   25.6   231   4.78     NP_650137   AAF54728
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Zona pellucida sperm-binding protein (IPR001507)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014297 AAF54728   AI534647   AY113516 AAM29521   AY232201   BI372618   CK133960   FE862663   FE862996   FE863143   FE863189   FE863304   GH741466   GH744992   GH745431   GH762287   GH763471   GH764940   GH765849   GH766392   GH768549
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8MYX4
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0037972    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0037972 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression. Peak expression observed at stages throughout the pupal period. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0037972 expression level Developmental Stage   Expression Level embryo 00-02hr    100 embryo 02-04hr    214 embryo 04-06hr    397 embryo 06-08hr    1477 embryo 08-10hr    2206 embryo 10-12hr    3550 embryo 12-14hr    2905 embryo 14-16hr    420 embryo 16-18hr    105 embryo 18-20hr    117 embryo 20-22hr    90 embryo 22-24hr    126 larva L1    265 larva L2    1300 larva L3 12hr old    303 larva L3 puffstage 1-2    511 larva L3 puffstage 3-6    792 larva L3 puffstage 7-9    1643 white prepupae new    3358 white prepupae 12hr    8310 white prepupae 24hr    4728 pupae 2d postWPP    5903 pupae 3d postWPP    590 pupae 4d postWPP    384 adult male 01day    85 adult male 05day    43 adult male 30day    46 adult female 01day    67 adult female 05day    60 adult female 30day    62 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    100 embryo 02-04hr  (214) embryo 04-06hr  (397) embryo 06-08hr  (1477) embryo 08-10hr  (2206) embryo 10-12hr  (3550) embryo 12-14hr  (2905) embryo 14-16hr  (420) embryo 16-18hr  105 embryo 18-20hr  (117) embryo 20-22hr    90 embryo 22-24hr  (126) larva L1  (265) larva L2  (1300) larva L3 12hr old  (303) larva L3 puffstage 1-2  (511) larva L3 puffstage 3-6  (792) larva L3 puffstage 7-9  (1643) white prepupae new  (3358) white prepupae 12hr  (8310) white prepupae 24hr  (4728) pupae 2d postWPP  (5903) pupae 3d postWPP  (590) pupae 4d postWPP  (384) adult male 01day    85 adult male 05day    43 adult male 30day    46 adult female 01day    67 adult female 05day    60 adult female 30day    62 Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    100 embryo 02-04hr    214 embryo 04-06hr    397 embryo 06-08hr  1477 embryo 08-10hr  (2206) embryo 10-12hr  (3550) embryo 12-14hr  (2905) embryo 14-16hr    420 embryo 16-18hr    105 embryo 18-20hr    117 embryo 20-22hr    90 embryo 22-24hr    126 larva L1    265 larva L2    1300 larva L3 12hr old    303 larva L3 puffstage 1-2    511 larva L3 puffstage 3-6    792 larva L3 puffstage 7-9  (1643) white prepupae new  (3358) white prepupae 12hr  (8310) white prepupae 24hr  (4728) pupae 2d postWPP  (5903) pupae 3d postWPP    590 pupae 4d postWPP    384 adult male 01day    85 adult male 05day    43 adult male 30day    46 adult female 01day    67 adult female 05day    60 adult female 30day    62 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    100 embryo 02-04hr    214 embryo 04-06hr    397 embryo 06-08hr    1477 embryo 08-10hr    2206 embryo 10-12hr    3550 embryo 12-14hr    2905 embryo 14-16hr    420 embryo 16-18hr    105 embryo 18-20hr    117 embryo 20-22hr    90 embryo 22-24hr    126 larva L1    265 larva L2    1300 larva L3 12hr old    303 larva L3 puffstage 1-2    511 larva L3 puffstage 3-6    792 larva L3 puffstage 7-9    1643 white prepupae new    3358 white prepupae 12hr    8310 white prepupae 24hr    4728 pupae 2d postWPP    5903 pupae 3d postWPP    590 pupae 4d postWPP    384 adult male 01day    85 adult male 05day    43 adult male 30day    46 adult female 01day    67 adult female 05day    60 adult female 30day    62 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    100 embryo 02-04hr    214 embryo 04-06hr    397 embryo 06-08hr    1477 embryo 08-10hr    2206 embryo 10-12hr    3550 embryo 12-14hr    2905 embryo 14-16hr    420 embryo 16-18hr    105 embryo 18-20hr    117 embryo 20-22hr    90 embryo 22-24hr    126 larva L1    265 larva L2    1300 larva L3 12hr old    303 larva L3 puffstage 1-2    511 larva L3 puffstage 3-6    792 larva L3 puffstage 7-9    1643 white prepupae new    3358 white prepupae 12hr    8310 white prepupae 24hr    4728 pupae 2d postWPP    5903 pupae 3d postWPP    590 pupae 4d postWPP    384 adult male 01day    85 adult male 05day    43 adult male 30day    46 adult female 01day    67 adult female 05day    60 adult female 30day    62 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0037972 expression level Developmental Stage   Expression Level embryo 00-02hr    100 embryo 02-04hr    214 embryo 04-06hr    397 embryo 06-08hr    1477 embryo 08-10hr    2206 embryo 10-12hr    3550 embryo 12-14hr    2905 embryo 14-16hr    420 embryo 16-18hr    105 embryo 18-20hr    117 embryo 20-22hr    90 embryo 22-24hr    126 larva L1    265 larva L2    1300 larva L3 12hr old    303 larva L3 puffstage 1-2    511 larva L3 puffstage 3-6    792 larva L3 puffstage 7-9    1643 white prepupae new    3358 white prepupae 12hr    8310 white prepupae 24hr    4728 pupae 2d postWPP    5903 pupae 3d postWPP    590 pupae 4d postWPP    384 adult male 01day    85 adult male 05day    43 adult male 30day    46 adult female 01day    67 adult female 05day    60 adult female 30day    62 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    100 embryo 02-04hr  (214) embryo 04-06hr  (397) embryo 06-08hr  (1477) embryo 08-10hr  (2206) embryo 10-12hr  (3550) embryo 12-14hr  (2905) embryo 14-16hr  (420) embryo 16-18hr  105 embryo 18-20hr  117 embryo 20-22hr    90 embryo 22-24hr  126 larva L1  (265) larva L2  (1300) larva L3 12hr old  (303) larva L3 puffstage 1-2  (511) larva L3 puffstage 3-6  (792) larva L3 puffstage 7-9  (1643) white prepupae new  (3358) white prepupae 12hr  (8310) white prepupae 24hr  (4728) pupae 2d postWPP  (5903) pupae 3d postWPP  (590) pupae 4d postWPP  (384) adult male 01day    85 adult male 05day    43 adult male 30day    46 adult female 01day    67 adult female 05day    60 adult female 30day    62 Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    100 embryo 02-04hr    214 embryo 04-06hr    397 embryo 06-08hr  1477 embryo 08-10hr  2206 embryo 10-12hr  (3550) embryo 12-14hr  (2905) embryo 14-16hr    420 embryo 16-18hr    105 embryo 18-20hr    117 embryo 20-22hr    90 embryo 22-24hr    126 larva L1    265 larva L2    1300 larva L3 12hr old    303 larva L3 puffstage 1-2    511 larva L3 puffstage 3-6    792 larva L3 puffstage 7-9  1643 white prepupae new  (3358) white prepupae 12hr  (8310) white prepupae 24hr  (4728) pupae 2d postWPP  (5903) pupae 3d postWPP    590 pupae 4d postWPP    384 adult male 01day    85 adult male 05day    43 adult male 30day    46 adult female 01day    67 adult female 05day    60 adult female 30day    62 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    100 embryo 02-04hr    214 embryo 04-06hr    397 embryo 06-08hr    1477 embryo 08-10hr    2206 embryo 10-12hr    3550 embryo 12-14hr    2905 embryo 14-16hr    420 embryo 16-18hr    105 embryo 18-20hr    117 embryo 20-22hr    90 embryo 22-24hr    126 larva L1    265 larva L2    1300 larva L3 12hr old    303 larva L3 puffstage 1-2    511 larva L3 puffstage 3-6    792 larva L3 puffstage 7-9    1643 white prepupae new    3358 white prepupae 12hr    8310 white prepupae 24hr    4728 pupae 2d postWPP    5903 pupae 3d postWPP    590 pupae 4d postWPP    384 adult male 01day    85 adult male 05day    43 adult male 30day    46 adult female 01day    67 adult female 05day    60 adult female 30day    62 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    100 embryo 02-04hr    214 embryo 04-06hr    397 embryo 06-08hr    1477 embryo 08-10hr    2206 embryo 10-12hr    3550 embryo 12-14hr    2905 embryo 14-16hr    420 embryo 16-18hr    105 embryo 18-20hr    117 embryo 20-22hr    90 embryo 22-24hr    126 larva L1    265 larva L2    1300 larva L3 12hr old    303 larva L3 puffstage 1-2    511 larva L3 puffstage 3-6    792 larva L3 puffstage 7-9    1643 white prepupae new    3358 white prepupae 12hr    8310 white prepupae 24hr    4728 pupae 2d postWPP    5903 pupae 3d postWPP    590 pupae 4d postWPP    384 adult male 01day    85 adult male 05day    43 adult male 30day    46 adult female 01day    67 adult female 05day    60 adult female 30day    62 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0037972    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0037972 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval hindgut, larval trachea, larval carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0037972 expression level Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut    238 Larval Malpighian Tubules    2.1 Larval Fat Body no informative data Larval Salivary Gland    6.2 Larval Trachea    398.3 Larval Carcass    104.675 Adult Head    3.3 Adult Eye    4.275 Adult Brain    3.1 Adult Thoracic-Abdominal Ganglion    1.5 Adult Crop    7.8 Adult Midgut no informative data Adult Hindgut    9.9 Adult Malpighian Tubules    1.3 Adult Fat Body    1.4 Adult Salivary Gland no informative data Adult Heart    3.925 Adult VirginFemale Spermatheca    2.3 Adult InseminatedFemale Spermatheca    2.1 Adult Ovary    7.2 Adult Testis    8.7 Adult Male Accessory Gland    3.5 Adult Carcass    3 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut    238 Larval Malpighian Tubules    2.1 Larval Fat Body no informative data Larval Salivary Gland    6.2 Larval Trachea    398.3 Larval Carcass    104.675 Adult Head    3.3 Adult Eye    4.275 Adult Brain    3.1 Adult Thoracic-Abdominal Ganglion    1.5 Adult Crop    7.8 Adult Midgut no informative data Adult Hindgut    9.9 Adult Malpighian Tubules    1.3 Adult Fat Body    1.4 Adult Salivary Gland no informative data Adult Heart    3.925 Adult VirginFemale Spermatheca    2.3 Adult InseminatedFemale Spermatheca    2.1 Adult Ovary    7.2 Adult Testis    8.7 Adult Male Accessory Gland    3.5 Adult Carcass    3 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut    238 Larval Malpighian Tubules    2.1 Larval Fat Body no informative data Larval Salivary Gland    6.2 Larval Trachea    398.3 Larval Carcass    104.675 Adult Head    3.3 Adult Eye    4.275 Adult Brain    3.1 Adult Thoracic-Abdominal Ganglion    1.5 Adult Crop    7.8 Adult Midgut no informative data Adult Hindgut    9.9 Adult Malpighian Tubules    1.3 Adult Fat Body    1.4 Adult Salivary Gland no informative data Adult Heart    3.925 Adult VirginFemale Spermatheca    2.3 Adult InseminatedFemale Spermatheca    2.1 Adult Ovary    7.2 Adult Testis    8.7 Adult Male Accessory Gland    3.5 Adult Carcass    3 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut    238 Larval Malpighian Tubules    2.1 Larval Fat Body no informative data Larval Salivary Gland    6.2 Larval Trachea    398.3 Larval Carcass    104.675 Adult Head    3.3 Adult Eye    4.275 Adult Brain    3.1 Adult Thoracic-Abdominal Ganglion    1.5 Adult Crop    7.8 Adult Midgut no informative data Adult Hindgut    9.9 Adult Malpighian Tubules    1.3 Adult Fat Body    1.4 Adult Salivary Gland no informative data Adult Heart    3.925 Adult VirginFemale Spermatheca    2.3 Adult InseminatedFemale Spermatheca    2.1 Adult Ovary    7.2 Adult Testis    8.7 Adult Male Accessory Gland    3.5 Adult Carcass    3 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0037972 expression level Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut    238 Larval Malpighian Tubules    2.1 Larval Fat Body no informative data Larval Salivary Gland    6.2 Larval Trachea    398.3 Larval Carcass    104.675 Adult Head    3.3 Adult Eye    4.275 Adult Brain    3.1 Adult Thoracic-Abdominal Ganglion    1.5 Adult Crop    7.8 Adult Midgut no informative data Adult Hindgut    9.9 Adult Malpighian Tubules    1.3 Adult Fat Body    1.4 Adult Salivary Gland no informative data Adult Heart    3.925 Adult VirginFemale Spermatheca    2.3 Adult InseminatedFemale Spermatheca    2.1 Adult Ovary    7.2 Adult Testis    8.7 Adult Male Accessory Gland    3.5 Adult Carcass    3 Expression Level Scale  None   Low   Moderate   High  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut    238 Larval Malpighian Tubules    2.1 Larval Fat Body no informative data Larval Salivary Gland    6.2 Larval Trachea    398.3 Larval Carcass    104.675 Adult Head    3.3 Adult Eye    4.275 Adult Brain    3.1 Adult Thoracic-Abdominal Ganglion    1.5 Adult Crop    7.8 Adult Midgut no informative data Adult Hindgut    9.9 Adult Malpighian Tubules    1.3 Adult Fat Body    1.4 Adult Salivary Gland no informative data Adult Heart    3.925 Adult VirginFemale Spermatheca    2.3 Adult InseminatedFemale Spermatheca    2.1 Adult Ovary    7.2 Adult Testis    8.7 Adult Male Accessory Gland    3.5 Adult Carcass    3 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut    238 Larval Malpighian Tubules    2.1 Larval Fat Body no informative data Larval Salivary Gland    6.2 Larval Trachea    398.3 Larval Carcass    104.675 Adult Head    3.3 Adult Eye    4.275 Adult Brain    3.1 Adult Thoracic-Abdominal Ganglion    1.5 Adult Crop    7.8 Adult Midgut no informative data Adult Hindgut    9.9 Adult Malpighian Tubules    1.3 Adult Fat Body    1.4 Adult Salivary Gland no informative data Adult Heart    3.925 Adult VirginFemale Spermatheca    2.3 Adult InseminatedFemale Spermatheca    2.1 Adult Ovary    7.2 Adult Testis    8.7 Adult Male Accessory Gland    3.5 Adult Carcass    3 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut    238 Larval Malpighian Tubules    2.1 Larval Fat Body no informative data Larval Salivary Gland    6.2 Larval Trachea    398.3 Larval Carcass    104.675 Adult Head    3.3 Adult Eye    4.275 Adult Brain    3.1 Adult Thoracic-Abdominal Ganglion    1.5 Adult Crop    7.8 Adult Midgut no informative data Adult Hindgut    9.9 Adult Malpighian Tubules    1.3 Adult Fat Body    1.4 Adult Salivary Gland no informative data Adult Heart    3.925 Adult VirginFemale Spermatheca    2.3 Adult InseminatedFemale Spermatheca    2.1 Adult Ovary    7.2 Adult Testis    8.7 Adult Male Accessory Gland    3.5 Adult Carcass    3 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body no informative data Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut no informative data Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland no informative data Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    3.3   NA  Eye    4.275   NA  Brain    3.1   no informative data  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    1.5   NA  Crop    7.8   no informative data  Midgut    no informative data   238  Hindgut    9.9   2.1  Malpighian Tubules    1.3   no informative data  Fat Body    1.4   6.2  Salivary Gland    no informative data   NA  Heart    3.925   398.3  Trachea    NA   NA  VirginFemale Spermatheca    2.3   NA  InseminatedFemale Spermatheca    2.1   NA  Ovary    7.2   NA  Testis    8.7   NA  Male Accessory Gland    3.5   104.675  Carcass    3 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_25
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037972 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG10005-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG10005GD5682 Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CG10005 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG10005 Class Mutagen Stocks Known lesion CG10005GD5682 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG10005KK109696 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel6162 (Ryder, 2004.4.26) Df(3R)Exel6163 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD5682} NA P{KK109696} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{SUPor-P}KG04493 NA
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
	There is no information supporting a biological process, cellular component or molecular function term for this gene. (Based on a review of available data on: 2011-07-04)
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG10005 allele Gene References
External Data
Linkouts	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0037972 DroID - A comprehensive database of gene and protein interactions. • FBgn0037972
Orthologs
Genome-wide drosophilid orthologs	Dana\GF23187 Dere\GG17174 Dgri\GH12788 Dmoj\GI24066 Dper\GL21589 Dpse\GA10003 Dsec\GM26054 Dsim\GD20617 Dvir\GJ23714 Dwil\GK11672 Dyak\GE24564
Curated drosophilid orthologs	Dpse\GA10003   Dyak\GE24564
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL008654-PA Aedes aegypti (mosquito) AGAP001445-PA Anopheles gambiae (mosquito) CPIJ006250 Culex pipens (mosquito) 306516 Daphnia pulex (daphnia) XP_969703.1 Tribolium castaneum (red flour beetle) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB16385 LH12192 FBgn0068522 FBgn0213683 FBgn0210811 FBgn0192084 FBgn0180909 JGI_V11_306516 FBgn0070062 FBgn0159182 FBgn0146789 FBgn0120267 FBgn0109401 FBgn0100181 CPIJ006250 AGAP001445 AAEL008654 GLEAN_14104
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
VDRC	v101799 P{KK109696}VIE-260B v38056 w1118 P{GD5682}v38056 v38055 w1118; P{GD5682}v38055
Genomic Clones ( 1 )
	BACR48E12 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 18 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE59626
Other clones	DPiM_RE59626
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	RE44761 SD07576
Other clones	RM06103 RM06203 RM06303 RM06403 RM06503 RP001006563 RP001011172 RP001013981 RP001024633 RP001037294 RP001040113 RP001040508 RP001043092 RP001047220
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0037972 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41451
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG10005 BcDNA:RE59626 (FlyBase, 1996-)
Additional comments	Source for merge of CG10005 BcDNA:RE59626 was a shared cDNA (date:030728). (FlyBase, 1996-)
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_141880 RefSeq (Proteins) • NP_650137 DDBJ / EMBL / GenBank • AAF54728 AAM29521 AY113516 BI372618 Entrez Gene - A searchable database of RefSeq genes. • 41451 UniProtKB/TrEMBL • Q8MYX4
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Zona pellucida sperm-binding protein (IPR001507)
Linkouts
	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0037972 DroID - A comprehensive database of gene and protein interactions. • FBgn0037972 DRSC - Results from RNAi screens. • FBgn0037972 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037972 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG10005-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0037972 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41451 InParanoid A subset of ortholog calls from InParanoid. • AAEL008654-PA Aedes aegypti (mosquito) AGAP001445-PA Anopheles gambiae (mosquito) CPIJ006250 Culex pipens (mosquito) 306516 Daphnia pulex (daphnia) XP_969703.1 Tribolium castaneum (red flour beetle) modMine - Data generated by the modENCODE project. • FBgn0037972 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB16385 LH12192 FBgn0068522 FBgn0213683 FBgn0210811 FBgn0192084 FBgn0180909 JGI_V11_306516 FBgn0070062 FBgn0159182 FBgn0146789 FBgn0120267 FBgn0109401 FBgn0100181 CPIJ006250 AGAP001445 AAEL008654 GLEAN_14104
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	BcDNA:RE59626   CG10005 (Keleman et al., 2009.8.5, Rehmsmeier et al., 2004)
Name Synonym
Secondary FlyBase IDs
	FBgn0062992
References ( 15 )
Research paper	Blanco et al., 2010, BMC Dev. Biol. 10: 94 Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812] Rehmsmeier et al., 2004, RNA, N.Y. 10(10): 1507--1517 Fast and effective prediction of microRNA/target duplexes. [FBrf0180666]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase Curators, 2010-, Gene Ontology (GO) annotation review. Gene Ontology (GO) annotation review. [FBrf0216433] FlyBase Curators, 2002-, Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. [FBrf0159398] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946] FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]