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Gene Dmel\CG14741

General Information
Symbol	Dmel\CG14741	Species	D. melanogaster
Name		Annotation symbol	CG14741
Feature type	protein_coding_gene	FlyBase ID	FBgn0037989
Gene Model Status	Current	Stock availability	4 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	87A7-87A8	Sequence location	3R:7,894,097..7,916,334 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG14741 (FBgn0037989). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: cation transport; phospholipid transport. 4 alleles are reported. No phenotypic data is available. It has 7 annotated transcripts and 7 annotated polypeptides. Protein features are: Cation-transporting P-type ATPase; HAD-like domain; P-type ATPase, A domain; P-type ATPase, cytoplasmic domain N; P-type ATPase, phosphorylation site; Phospholipid-transporting P-type ATPase, subfamily IV. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 12-24 hour embryonic stages, during early larval stages, at stages throughout the pupal period, in adult male stages. Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. Comments on Affy2 ProbeSet: ProbeSet 1638859_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG14741. Gene sequence location is 3R:7894097..7916334.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 87A7-87A8   Limits computationally determined from genome sequence between P{EP}Lk6EP886 and P{PZ}svp07842
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG14741 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.49 Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters. Low-frequency RNA-Seq exon junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG14741-RB FBtr0300351  NM_169450   6697   1726 CG14741-RC FBtr0307015  NM_001260138   6500   1547 CG14741-RD FBtr0307016  NM_001260139   6007   1496 CG14741-RF FBtr0339643     5810   1317 CG14741-RG FBtr0339644     6245   1462 CG14741-RH FBtr0339645     6458   1533 CG14741-RI FBtr0339646     6203   1448
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG14741-PB   FBpp0289580   193.4   1726   7.67     NP_731669   AAF54749 CG14741-PC   FBpp0297858   173.3   1547   7.41     NP_001247067   AFH06385 CG14741-PD   FBpp0297859   168.2   1496   6.62     NP_001247068   AFH06386 CG14741-PF   FBpp0308705   148.2   1317   6.38       CG14741-PG   FBpp0308706   163.5   1462   6.88       CG14741-PH   FBpp0308707   171.7   1533   7.41       CG14741-PI   FBpp0308708   161.9   1448   6.88
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Cation-transporting P-type ATPase (IPR001757) Phospholipid-transporting P-type ATPase, subfamily IV (IPR006539) P-type ATPase, A domain (IPR008250) P-type ATPase, phosphorylation site (IPR018303) HAD-like domain (IPR023214) P-type ATPase, cytoplasmic domain N (IPR023299)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014297 AAF54749   AE014297 AFH06385   AE014297 AFH06386   BI353449   BT023848   CO177222   CO267741   CO271333   CO284938   CO292226   CO304524   CO308884   CO326150   CO343229   EC075083   EC076754   EC077736   EC084661   EC206361   EC208973   EC214351   EC223036   EC230099   EY198879   GR705718
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VGD4
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    13.725 Larval Midgut    13.5 Larval Hindgut    13.1 Larval Malpighian Tubules    16.9 Larval Fat Body    9.5 Larval Salivary Gland    2.7 Larval Trachea    3.85 Larval Carcass    6.25 Adult Head    16.9 Adult Eye    6.35 Adult Brain    39.5 Adult Thoracic-Abdominal Ganglion    40.1 Adult Crop    11.1 Adult Midgut    20.9 Adult Hindgut    18.1 Adult Malpighian Tubules    12.4 Adult Fat Body    8.2 Adult Salivary Gland    24.5 Adult Heart    4.525 Adult VirginFemale Spermatheca    6.2 Adult InseminatedFemale Spermatheca    8.1 Adult Ovary    2.1 Adult Testis    20.2 Adult Male Accessory Gland    9.3 Adult Carcass    14.6 Expression Level Scale  None   Low  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    13.725 Larval Midgut    13.5 Larval Hindgut    13.1 Larval Malpighian Tubules    16.9 Larval Fat Body    9.5 Larval Salivary Gland    2.7 Larval Trachea    3.85 Larval Carcass    6.25 Adult Head    16.9 Adult Eye    6.35 Adult Brain    39.5 Adult Thoracic-Abdominal Ganglion    40.1 Adult Crop    11.1 Adult Midgut    20.9 Adult Hindgut    18.1 Adult Malpighian Tubules    12.4 Adult Fat Body    8.2 Adult Salivary Gland    24.5 Adult Heart    4.525 Adult VirginFemale Spermatheca    6.2 Adult InseminatedFemale Spermatheca    8.1 Adult Ovary    2.1 Adult Testis    20.2 Adult Male Accessory Gland    9.3 Adult Carcass    14.6 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    13.725 Larval Midgut    13.5 Larval Hindgut    13.1 Larval Malpighian Tubules    16.9 Larval Fat Body    9.5 Larval Salivary Gland    2.7 Larval Trachea    3.85 Larval Carcass    6.25 Adult Head    16.9 Adult Eye    6.35 Adult Brain    39.5 Adult Thoracic-Abdominal Ganglion    40.1 Adult Crop    11.1 Adult Midgut    20.9 Adult Hindgut    18.1 Adult Malpighian Tubules    12.4 Adult Fat Body    8.2 Adult Salivary Gland    24.5 Adult Heart    4.525 Adult VirginFemale Spermatheca    6.2 Adult InseminatedFemale Spermatheca    8.1 Adult Ovary    2.1 Adult Testis    20.2 Adult Male Accessory Gland    9.3 Adult Carcass    14.6 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    13.725 Larval Midgut    13.5 Larval Hindgut    13.1 Larval Malpighian Tubules    16.9 Larval Fat Body    9.5 Larval Salivary Gland    2.7 Larval Trachea    3.85 Larval Carcass    6.25 Adult Head    16.9 Adult Eye    6.35 Adult Brain    39.5 Adult Thoracic-Abdominal Ganglion    40.1 Adult Crop    11.1 Adult Midgut    20.9 Adult Hindgut    18.1 Adult Malpighian Tubules    12.4 Adult Fat Body    8.2 Adult Salivary Gland    24.5 Adult Heart    4.525 Adult VirginFemale Spermatheca    6.2 Adult InseminatedFemale Spermatheca    8.1 Adult Ovary    2.1 Adult Testis    20.2 Adult Male Accessory Gland    9.3 Adult Carcass    14.6 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    13.725 Larval Midgut    13.5 Larval Hindgut    13.1 Larval Malpighian Tubules    16.9 Larval Fat Body    9.5 Larval Salivary Gland    2.7 Larval Trachea    3.85 Larval Carcass    6.25 Adult Head    16.9 Adult Eye    6.35 Adult Brain    39.5 Adult Thoracic-Abdominal Ganglion    40.1 Adult Crop    11.1 Adult Midgut    20.9 Adult Hindgut    18.1 Adult Malpighian Tubules    12.4 Adult Fat Body    8.2 Adult Salivary Gland    24.5 Adult Heart    4.525 Adult VirginFemale Spermatheca    6.2 Adult InseminatedFemale Spermatheca    8.1 Adult Ovary    2.1 Adult Testis    20.2 Adult Male Accessory Gland    9.3 Adult Carcass    14.6 Expression Level Scale  None   Low  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    13.725 Larval Midgut    13.5 Larval Hindgut    13.1 Larval Malpighian Tubules    16.9 Larval Fat Body    9.5 Larval Salivary Gland    2.7 Larval Trachea    3.85 Larval Carcass    6.25 Adult Head    16.9 Adult Eye    6.35 Adult Brain    39.5 Adult Thoracic-Abdominal Ganglion    40.1 Adult Crop    11.1 Adult Midgut    20.9 Adult Hindgut    18.1 Adult Malpighian Tubules    12.4 Adult Fat Body    8.2 Adult Salivary Gland    24.5 Adult Heart    4.525 Adult VirginFemale Spermatheca    6.2 Adult InseminatedFemale Spermatheca    8.1 Adult Ovary    2.1 Adult Testis    20.2 Adult Male Accessory Gland    9.3 Adult Carcass    14.6 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    13.725 Larval Midgut    13.5 Larval Hindgut    13.1 Larval Malpighian Tubules    16.9 Larval Fat Body    9.5 Larval Salivary Gland    2.7 Larval Trachea    3.85 Larval Carcass    6.25 Adult Head    16.9 Adult Eye    6.35 Adult Brain    39.5 Adult Thoracic-Abdominal Ganglion    40.1 Adult Crop    11.1 Adult Midgut    20.9 Adult Hindgut    18.1 Adult Malpighian Tubules    12.4 Adult Fat Body    8.2 Adult Salivary Gland    24.5 Adult Heart    4.525 Adult VirginFemale Spermatheca    6.2 Adult InseminatedFemale Spermatheca    8.1 Adult Ovary    2.1 Adult Testis    20.2 Adult Male Accessory Gland    9.3 Adult Carcass    14.6 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    13.725 Larval Midgut    13.5 Larval Hindgut    13.1 Larval Malpighian Tubules    16.9 Larval Fat Body    9.5 Larval Salivary Gland    2.7 Larval Trachea    3.85 Larval Carcass    6.25 Adult Head    16.9 Adult Eye    6.35 Adult Brain    39.5 Adult Thoracic-Abdominal Ganglion    40.1 Adult Crop    11.1 Adult Midgut    20.9 Adult Hindgut    18.1 Adult Malpighian Tubules    12.4 Adult Fat Body    8.2 Adult Salivary Gland    24.5 Adult Heart    4.525 Adult VirginFemale Spermatheca    6.2 Adult InseminatedFemale Spermatheca    8.1 Adult Ovary    2.1 Adult Testis    20.2 Adult Male Accessory Gland    9.3 Adult Carcass    14.6 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    no informative data   NA  Eye    6.35   NA  Brain    39.5   no informative data  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    40.1   NA  Crop    no informative data   no informative data  Midgut    no informative data   no informative data  Hindgut    no informative data   no informative data  Malpighian Tubules    no informative data   9.5  Fat Body    8.2   2.7  Salivary Gland    no informative data   NA  Heart    4.525   3.85  Trachea    NA   NA  VirginFemale Spermatheca    6.2   NA  InseminatedFemale Spermatheca    8.1   NA  Ovary    2.1   NA  Testis    no informative data   NA  Male Accessory Gland    9.3   6.25  Carcass    no informative data FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    2 central nervous system, larvae L3    7 central nervous system, pupae P8    6 head, virgin 1-day female    8 head, virgin 4-day female    8 head, virgin 20-day female    6 head, mated 1-day female    7 head, mated 4-day female    8 head, mated 20-day female    5 head, mated 1-day male    12 head, mated 4-day male    15 head, mated 20-day male    12 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    2 digestive system, 1-day adult    3 digestive system, 4-day adult    4 digestive system, 20-day adult    6 fat body, larvae L3 wandering    0 fat body, white prepupae    1 fat body, pupae P8    0 carcass, larvae L3 wandering    4 carcass, 1-day adult    4 carcass, 4-day adult    5 carcass, 20-day adult    3 ovary, virgin 4-day female    1 ovary, mated 4-day female    1 testis, mated 4-day male    3 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    2 central nervous system, larvae L3    7 central nervous system, pupae P8    6 head, virgin 1-day female    8 head, virgin 4-day female    8 head, virgin 20-day female    6 head, mated 1-day female    7 head, mated 4-day female    8 head, mated 20-day female    5 head, mated 1-day male    12 head, mated 4-day male    15 head, mated 20-day male    12 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    2 digestive system, 1-day adult    3 digestive system, 4-day adult    4 digestive system, 20-day adult    6 fat body, larvae L3 wandering    0 fat body, white prepupae    1 fat body, pupae P8    0 carcass, larvae L3 wandering    4 carcass, 1-day adult    4 carcass, 4-day adult    5 carcass, 20-day adult    3 ovary, virgin 4-day female    1 ovary, mated 4-day female    1 testis, mated 4-day male    3 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    2 central nervous system, larvae L3    7 central nervous system, pupae P8    6 head, virgin 1-day female    8 head, virgin 4-day female    8 head, virgin 20-day female    6 head, mated 1-day female    7 head, mated 4-day female    8 head, mated 20-day female    5 head, mated 1-day male    12 head, mated 4-day male    15 head, mated 20-day male    12 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    2 digestive system, 1-day adult    3 digestive system, 4-day adult    4 digestive system, 20-day adult    6 fat body, larvae L3 wandering    0 fat body, white prepupae    1 fat body, pupae P8    0 carcass, larvae L3 wandering    4 carcass, 1-day adult    4 carcass, 4-day adult    5 carcass, 20-day adult    3 ovary, virgin 4-day female    1 ovary, mated 4-day female    1 testis, mated 4-day male    3 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    2 central nervous system, larvae L3    7 central nervous system, pupae P8    6 head, virgin 1-day female    8 head, virgin 4-day female    8 head, virgin 20-day female    6 head, mated 1-day female    7 head, mated 4-day female    8 head, mated 20-day female    5 head, mated 1-day male    12 head, mated 4-day male    15 head, mated 20-day male    12 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    2 digestive system, 1-day adult    3 digestive system, 4-day adult    4 digestive system, 20-day adult    6 fat body, larvae L3 wandering    0 fat body, white prepupae    1 fat body, pupae P8    0 carcass, larvae L3 wandering    4 carcass, 1-day adult    4 carcass, 4-day adult    5 carcass, 20-day adult    3 ovary, virgin 4-day female    1 ovary, mated 4-day female    1 testis, mated 4-day male    3 accessory gland, mated 4-day male    1 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    2 central nervous system, larvae L3    7 central nervous system, pupae P8    6 head, virgin 1-day female    8 head, virgin 4-day female    8 head, virgin 20-day female    6 head, mated 1-day female    7 head, mated 4-day female    8 head, mated 20-day female    5 head, mated 1-day male    12 head, mated 4-day male    15 head, mated 20-day male    12 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    2 digestive system, 1-day adult    3 digestive system, 4-day adult    4 digestive system, 20-day adult    6 fat body, larvae L3 wandering    0 fat body, white prepupae    1 fat body, pupae P8    0 carcass, larvae L3 wandering    4 carcass, 1-day adult    4 carcass, 4-day adult    5 carcass, 20-day adult    3 ovary, virgin 4-day female    1 ovary, mated 4-day female    1 testis, mated 4-day male    3 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    2 central nervous system, larvae L3    7 central nervous system, pupae P8    6 head, virgin 1-day female    8 head, virgin 4-day female    8 head, virgin 20-day female    6 head, mated 1-day female    7 head, mated 4-day female    8 head, mated 20-day female    5 head, mated 1-day male    12 head, mated 4-day male    15 head, mated 20-day male    12 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    2 digestive system, 1-day adult    3 digestive system, 4-day adult    4 digestive system, 20-day adult    6 fat body, larvae L3 wandering    0 fat body, white prepupae    1 fat body, pupae P8    0 carcass, larvae L3 wandering    4 carcass, 1-day adult    4 carcass, 4-day adult    5 carcass, 20-day adult    3 ovary, virgin 4-day female    1 ovary, mated 4-day female    1 testis, mated 4-day male    3 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    2 central nervous system, larvae L3    7 central nervous system, pupae P8    6 head, virgin 1-day female    8 head, virgin 4-day female    8 head, virgin 20-day female    6 head, mated 1-day female    7 head, mated 4-day female    8 head, mated 20-day female    5 head, mated 1-day male    12 head, mated 4-day male    15 head, mated 20-day male    12 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    2 digestive system, 1-day adult    3 digestive system, 4-day adult    4 digestive system, 20-day adult    6 fat body, larvae L3 wandering    0 fat body, white prepupae    1 fat body, pupae P8    0 carcass, larvae L3 wandering    4 carcass, 1-day adult    4 carcass, 4-day adult    5 carcass, 20-day adult    3 ovary, virgin 4-day female    1 ovary, mated 4-day female    1 testis, mated 4-day male    3 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    2 central nervous system, larvae L3    7 central nervous system, pupae P8    6 head, virgin 1-day female    8 head, virgin 4-day female    8 head, virgin 20-day female    6 head, mated 1-day female    7 head, mated 4-day female    8 head, mated 20-day female    5 head, mated 1-day male    12 head, mated 4-day male    15 head, mated 20-day male    12 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    2 digestive system, 1-day adult    3 digestive system, 4-day adult    4 digestive system, 20-day adult    6 fat body, larvae L3 wandering    0 fat body, white prepupae    1 fat body, pupae P8    0 carcass, larvae L3 wandering    4 carcass, 1-day adult    4 carcass, 4-day adult    5 carcass, 20-day adult    3 ovary, virgin 4-day female    1 ovary, mated 4-day female    1 testis, mated 4-day male    3 accessory gland, mated 4-day male    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 12-24 hour embryonic stages, during early larval stages, at stages throughout the pupal period, in adult male stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    1 embryo 10-12hr    1 embryo 12-14hr    2 embryo 14-16hr    2 embryo 16-18hr    5 embryo 18-20hr    7 embryo 20-22hr    5 embryo 22-24hr    6 larva L1    5 larva L2    5 larva L3 12hr old    4 larva L3 puffstage 1-2    2 larva L3 puffstage 3-6    4 larva L3 puffstage 7-9    3 white prepupae new    3 white prepupae 12hr    5 white prepupae 24hr    4 pupae 2d postWPP    3 pupae 3d postWPP    4 pupae 4d postWPP    7 adult male 01day    8 adult male 05day    9 adult male 30day    9 adult female 01day    3 adult female 05day    2 adult female 30day    2 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    1 embryo 10-12hr    1 embryo 12-14hr    2 embryo 14-16hr    2 embryo 16-18hr    5 embryo 18-20hr    7 embryo 20-22hr    5 embryo 22-24hr    6 larva L1    5 larva L2    5 larva L3 12hr old    4 larva L3 puffstage 1-2    2 larva L3 puffstage 3-6    4 larva L3 puffstage 7-9    3 white prepupae new    3 white prepupae 12hr    5 white prepupae 24hr    4 pupae 2d postWPP    3 pupae 3d postWPP    4 pupae 4d postWPP    7 adult male 01day    8 adult male 05day    9 adult male 30day    9 adult female 01day    3 adult female 05day    2 adult female 30day    2 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    1 embryo 10-12hr    1 embryo 12-14hr    2 embryo 14-16hr    2 embryo 16-18hr    5 embryo 18-20hr    7 embryo 20-22hr    5 embryo 22-24hr    6 larva L1    5 larva L2    5 larva L3 12hr old    4 larva L3 puffstage 1-2    2 larva L3 puffstage 3-6    4 larva L3 puffstage 7-9    3 white prepupae new    3 white prepupae 12hr    5 white prepupae 24hr    4 pupae 2d postWPP    3 pupae 3d postWPP    4 pupae 4d postWPP    7 adult male 01day    8 adult male 05day    9 adult male 30day    9 adult female 01day    3 adult female 05day    2 adult female 30day    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    1 embryo 10-12hr    1 embryo 12-14hr    2 embryo 14-16hr    2 embryo 16-18hr    5 embryo 18-20hr    7 embryo 20-22hr    5 embryo 22-24hr    6 larva L1    5 larva L2    5 larva L3 12hr old    4 larva L3 puffstage 1-2    2 larva L3 puffstage 3-6    4 larva L3 puffstage 7-9    3 white prepupae new    3 white prepupae 12hr    5 white prepupae 24hr    4 pupae 2d postWPP    3 pupae 3d postWPP    4 pupae 4d postWPP    7 adult male 01day    8 adult male 05day    9 adult male 30day    9 adult female 01day    3 adult female 05day    2 adult female 30day    2 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    1 embryo 10-12hr    1 embryo 12-14hr    2 embryo 14-16hr    2 embryo 16-18hr    5 embryo 18-20hr    7 embryo 20-22hr    5 embryo 22-24hr    6 larva L1    5 larva L2    5 larva L3 12hr old    4 larva L3 puffstage 1-2    2 larva L3 puffstage 3-6    4 larva L3 puffstage 7-9    3 white prepupae new    3 white prepupae 12hr    5 white prepupae 24hr    4 pupae 2d postWPP    3 pupae 3d postWPP    4 pupae 4d postWPP    7 adult male 01day    8 adult male 05day    9 adult male 30day    9 adult female 01day    3 adult female 05day    2 adult female 30day    2 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    1 embryo 10-12hr    1 embryo 12-14hr    2 embryo 14-16hr    2 embryo 16-18hr    5 embryo 18-20hr    7 embryo 20-22hr    5 embryo 22-24hr    6 larva L1    5 larva L2    5 larva L3 12hr old    4 larva L3 puffstage 1-2    2 larva L3 puffstage 3-6    4 larva L3 puffstage 7-9    3 white prepupae new    3 white prepupae 12hr    5 white prepupae 24hr    4 pupae 2d postWPP    3 pupae 3d postWPP    4 pupae 4d postWPP    7 adult male 01day    8 adult male 05day    9 adult male 30day    9 adult female 01day    3 adult female 05day    2 adult female 30day    2 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    1 embryo 10-12hr    1 embryo 12-14hr    2 embryo 14-16hr    2 embryo 16-18hr    5 embryo 18-20hr    7 embryo 20-22hr    5 embryo 22-24hr    6 larva L1    5 larva L2    5 larva L3 12hr old    4 larva L3 puffstage 1-2    2 larva L3 puffstage 3-6    4 larva L3 puffstage 7-9    3 white prepupae new    3 white prepupae 12hr    5 white prepupae 24hr    4 pupae 2d postWPP    3 pupae 3d postWPP    4 pupae 4d postWPP    7 adult male 01day    8 adult male 05day    9 adult male 30day    9 adult female 01day    3 adult female 05day    2 adult female 30day    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    1 embryo 10-12hr    1 embryo 12-14hr    2 embryo 14-16hr    2 embryo 16-18hr    5 embryo 18-20hr    7 embryo 20-22hr    5 embryo 22-24hr    6 larva L1    5 larva L2    5 larva L3 12hr old    4 larva L3 puffstage 1-2    2 larva L3 puffstage 3-6    4 larva L3 puffstage 7-9    3 white prepupae new    3 white prepupae 12hr    5 white prepupae 24hr    4 pupae 2d postWPP    3 pupae 3d postWPP    4 pupae 4d postWPP    7 adult male 01day    8 adult male 05day    9 adult male 30day    9 adult female 01day    3 adult female 05day    2 adult female 30day    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    2 Schneider line 2 Sg4    31 embryonic 1182-4H    2 embryonic GM2    82 embryonic Kc167    15 embryonic S1    47 embryonic S3    2 leg disc CME L1    33 wing disc CME-W2    58 wing disc ML-DmD8    30 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    11 wing disc ML-DmD21    0 wing disc ML-DmD32    30 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    46 antennal disc ML-DmD20-c5    5 mixed discs ML-DmD4-c1    11 CNS ML-DmBG1-c1    9 CNS ML-DmBG2-c2    16 tumorous blood cells mbn2    43 ovary fGS/OSS    0 ovary OSC    1 ovary OSS    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    2 Schneider line 2 Sg4  (31) embryonic 1182-4H    2 embryonic GM2  (82) embryonic Kc167    15 embryonic S1  (47) embryonic S3    2 leg disc CME L1  (33) wing disc CME-W2  (58) wing disc ML-DmD8  (30) wing disc ML-DmD9    17 wing disc ML-DmD16-c3    11 wing disc ML-DmD21    0 wing disc ML-DmD32  (30) haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11  (46) antennal disc ML-DmD20-c5    5 mixed discs ML-DmD4-c1    11 CNS ML-DmBG1-c1    9 CNS ML-DmBG2-c2    16 tumorous blood cells mbn2  (43) ovary fGS/OSS    0 ovary OSC    1 ovary OSS    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    2 Schneider line 2 Sg4    31 embryonic 1182-4H    2 embryonic GM2    82 embryonic Kc167    15 embryonic S1    47 embryonic S3    2 leg disc CME L1    33 wing disc CME-W2    58 wing disc ML-DmD8    30 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    11 wing disc ML-DmD21    0 wing disc ML-DmD32    30 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    46 antennal disc ML-DmD20-c5    5 mixed discs ML-DmD4-c1    11 CNS ML-DmBG1-c1    9 CNS ML-DmBG2-c2    16 tumorous blood cells mbn2    43 ovary fGS/OSS    0 ovary OSC    1 ovary OSS    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    2 Schneider line 2 Sg4    31 embryonic 1182-4H    2 embryonic GM2    82 embryonic Kc167    15 embryonic S1    47 embryonic S3    2 leg disc CME L1    33 wing disc CME-W2    58 wing disc ML-DmD8    30 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    11 wing disc ML-DmD21    0 wing disc ML-DmD32    30 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    46 antennal disc ML-DmD20-c5    5 mixed discs ML-DmD4-c1    11 CNS ML-DmBG1-c1    9 CNS ML-DmBG2-c2    16 tumorous blood cells mbn2    43 ovary fGS/OSS    0 ovary OSC    1 ovary OSS    3 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    2 Schneider line 2 Sg4    31 embryonic 1182-4H    2 embryonic GM2    82 embryonic Kc167    15 embryonic S1    47 embryonic S3    2 leg disc CME L1    33 wing disc CME-W2    58 wing disc ML-DmD8    30 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    11 wing disc ML-DmD21    0 wing disc ML-DmD32    30 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    46 antennal disc ML-DmD20-c5    5 mixed discs ML-DmD4-c1    11 CNS ML-DmBG1-c1    9 CNS ML-DmBG2-c2    16 tumorous blood cells mbn2    43 ovary fGS/OSS    0 ovary OSC    1 ovary OSS    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    2 Schneider line 2 Sg4  31 embryonic 1182-4H    2 embryonic GM2  (82) embryonic Kc167    15 embryonic S1  (47) embryonic S3    2 leg disc CME L1  (33) wing disc CME-W2  (58) wing disc ML-DmD8  30 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    11 wing disc ML-DmD21    0 wing disc ML-DmD32  30 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11  (46) antennal disc ML-DmD20-c5    5 mixed discs ML-DmD4-c1    11 CNS ML-DmBG1-c1    9 CNS ML-DmBG2-c2    16 tumorous blood cells mbn2  (43) ovary fGS/OSS    0 ovary OSC    1 ovary OSS    3 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    2 Schneider line 2 Sg4    31 embryonic 1182-4H    2 embryonic GM2    82 embryonic Kc167    15 embryonic S1    47 embryonic S3    2 leg disc CME L1    33 wing disc CME-W2    58 wing disc ML-DmD8    30 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    11 wing disc ML-DmD21    0 wing disc ML-DmD32    30 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    46 antennal disc ML-DmD20-c5    5 mixed discs ML-DmD4-c1    11 CNS ML-DmBG1-c1    9 CNS ML-DmBG2-c2    16 tumorous blood cells mbn2    43 ovary fGS/OSS    0 ovary OSC    1 ovary OSS    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    2 Schneider line 2 Sg4    31 embryonic 1182-4H    2 embryonic GM2    82 embryonic Kc167    15 embryonic S1    47 embryonic S3    2 leg disc CME L1    33 wing disc CME-W2    58 wing disc ML-DmD8    30 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    11 wing disc ML-DmD21    0 wing disc ML-DmD32    30 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    46 antennal disc ML-DmD20-c5    5 mixed discs ML-DmD4-c1    11 CNS ML-DmBG1-c1    9 CNS ML-DmBG2-c2    16 tumorous blood cells mbn2    43 ovary fGS/OSS    0 ovary OSC    1 ovary OSS    3 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    2 cold shock, 4-day adult    1 heat shock, 4-day adult    2 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    2 Cadmium 50 mM 48 hrs, 4-day adult    2 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    1 Zinc 4.5 mM 48 hrs, 4-day adult    8 Ethanol 2.5% 3 hrs, larvae L3    3 Ethanol 5% 3 hrs, larvae L3    2 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    2 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    2 Paraquat 5 mM 48 hrs, 4-day adult    4 Paraquat 10 mM 48 hrs, 4-day adult    4 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    2 cold shock, 4-day adult    1 heat shock, 4-day adult    2 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    2 Cadmium 50 mM 48 hrs, 4-day adult    2 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    1 Zinc 4.5 mM 48 hrs, 4-day adult    8 Ethanol 2.5% 3 hrs, larvae L3    3 Ethanol 5% 3 hrs, larvae L3    2 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    2 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    2 Paraquat 5 mM 48 hrs, 4-day adult    4 Paraquat 10 mM 48 hrs, 4-day adult    4 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    2 cold shock, 4-day adult    1 heat shock, 4-day adult    2 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    2 Cadmium 50 mM 48 hrs, 4-day adult    2 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    1 Zinc 4.5 mM 48 hrs, 4-day adult    8 Ethanol 2.5% 3 hrs, larvae L3    3 Ethanol 5% 3 hrs, larvae L3    2 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    2 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    2 Paraquat 5 mM 48 hrs, 4-day adult    4 Paraquat 10 mM 48 hrs, 4-day adult    4 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    2 cold shock, 4-day adult    1 heat shock, 4-day adult    2 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    2 Cadmium 50 mM 48 hrs, 4-day adult    2 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    1 Zinc 4.5 mM 48 hrs, 4-day adult    8 Ethanol 2.5% 3 hrs, larvae L3    3 Ethanol 5% 3 hrs, larvae L3    2 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    2 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    2 Paraquat 5 mM 48 hrs, 4-day adult    4 Paraquat 10 mM 48 hrs, 4-day adult    4 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    2 cold shock, 4-day adult    1 heat shock, 4-day adult    2 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    2 Cadmium 50 mM 48 hrs, 4-day adult    2 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    1 Zinc 4.5 mM 48 hrs, 4-day adult    8 Ethanol 2.5% 3 hrs, larvae L3    3 Ethanol 5% 3 hrs, larvae L3    2 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    2 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    2 Paraquat 5 mM 48 hrs, 4-day adult    4 Paraquat 10 mM 48 hrs, 4-day adult    4 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    2 cold shock, 4-day adult    1 heat shock, 4-day adult    2 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    2 Cadmium 50 mM 48 hrs, 4-day adult    2 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    1 Zinc 4.5 mM 48 hrs, 4-day adult    8 Ethanol 2.5% 3 hrs, larvae L3    3 Ethanol 5% 3 hrs, larvae L3    2 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    2 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    2 Paraquat 5 mM 48 hrs, 4-day adult    4 Paraquat 10 mM 48 hrs, 4-day adult    4 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    2 cold shock, 4-day adult    1 heat shock, 4-day adult    2 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    2 Cadmium 50 mM 48 hrs, 4-day adult    2 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    1 Zinc 4.5 mM 48 hrs, 4-day adult    8 Ethanol 2.5% 3 hrs, larvae L3    3 Ethanol 5% 3 hrs, larvae L3    2 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    2 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    2 Paraquat 5 mM 48 hrs, 4-day adult    4 Paraquat 10 mM 48 hrs, 4-day adult    4 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    2 cold shock, 4-day adult    1 heat shock, 4-day adult    2 Cadmium 50 mM 6 hrs, larvae L3    1 Cadmium 50 mM 12 hrs, larvae L3    2 Cadmium 50 mM 48 hrs, 4-day adult    2 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    1 Copper 15 mM 48 hrs, 4-day adult    4 Zinc 5 mM 12 hrs, larvae L3    1 Zinc 4.5 mM 48 hrs, 4-day adult    8 Ethanol 2.5% 3 hrs, larvae L3    3 Ethanol 5% 3 hrs, larvae L3    2 Ethanol 10% 3 hrs, larvae L3    1 Caffeine 1.5 mg/ml 4 hrs, larvae L3    2 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    2 Paraquat 5 mM 48 hrs, 4-day adult    4 Paraquat 10 mM 48 hrs, 4-day adult    4 Rotenone 2 μg 12 hrs, larvae L3    2 Rotenone 8 μg 12 hrs, larvae L3    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_18 mE1_20_mRNA_expression_cluster_11
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037989 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG14741-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable CG14741f05203 Sterility Allele fertile CG14741f05203 Phenotype manifest in Allele
Classical Alleles ( 2 )
For All Classical Alleles Show
Allele of CG14741 Class Mutagen Stocks Known lesion CG14741f05203 piggyBac transposase 2 -- CG14741MI06979 1 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG14741 Class Mutagen Stocks Known lesion CG14741KK103739 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG14741GD2936 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel6162 (Ryder, 2004.4.26) Df(3R)Exel7312 (Ryder, 2004.4.26) Df(3R)Exel8155 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD2936} NA P{KK103739} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions Mi{MIC}CG14741MI06979 NA PBac{WH}CG14741f05203 NA
Gene Ontology: Function, Process & Cellular Component ( 8 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 8 terms )
Molecular Function
CV term Evidence References
ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism inferred from sequence or structural similarity with EMBL:U75321 (FlyBase, 1992-) ATP binding inferred from electronic annotation with InterPro:IPR001757, InterPro:IPR006539, InterPro:IPR018303 (FlyBase Curators et al., 2004-) cation-transporting ATPase activity inferred from electronic annotation with InterPro:IPR001757 (FlyBase Curators et al., 2004-) magnesium ion binding inferred from electronic annotation with InterPro:IPR006539 (FlyBase Curators et al., 2004-) phospholipid-translocating ATPase activity inferred from electronic annotation with InterPro:IPR006539 (FlyBase Curators et al., 2004-)
Biological Process
CV term Evidence References
cation transport inferred from electronic annotation with InterPro:IPR001757 (FlyBase Curators et al., 2004-) phospholipid transport inferred from electronic annotation with InterPro:IPR006539 (FlyBase Curators et al., 2004-)
Cellular Component
CV term Evidence References
integral to membrane inferred from electronic annotation with InterPro:IPR006539 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG14741 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0037989 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 41469
Orthologs
OrthoDB Orthologs (71) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6QRHP9 Dipteran inclusive ortholog search EOG63FH4V Insect inclusive ortholog search EOG61G200 Arthropod inclusive ortholog search EOG6XKSNV Metazoa inclusive ortholog search EOG6K13F2
Orthologs in Drosophila Species (EOG6QRHP9)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG14741     Drosophila simulans   Dsim\GD20604 Y   Drosophila sechellia   Dsec\GM26043 Y   Drosophila erecta   Dere\GG17161 Y   Drosophila yakuba   Dyak\GE24551 Y   Drosophila ananassae   Dana\GF17746 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA13214 Y   Drosophila persimilis   Dper\GL21577 Y   Drosophila willistoni   Dwil\GK25424 Y   Drosophila virilis   Dvir\GJ18766 Y   Drosophila mojavensis   Dmoj\GI14418 Y   Drosophila grimshawi   Dgri\GH24867 Y
Orthologs in non-Drosophila Dipterans (EOG63FH4V)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL005495   Anopheles gambiae Malaria mosquito  Agam\AGAP002644   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ008924
Orthologs in non-Dipteran Insects (EOG61G200)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB52189   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG006046   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH24404   Atta cephalotes Leafcutter ant  Acep\ACEP20377   Camponotus floridanus Florida carpenter ant  Cflo\CFLO18340   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL14881   Linepithema humile Argentine ant  Lhum\LH13744   Pogonomyrmex barbatus Red harvester ant  Pbar\PB25587   Solenopsis invicta Red fire ant  Sinv\SINV14365   Acyrthosiphon pisum Pea aphid  Apim\ACYPI088026   Bombyx mori Silkmoth  Bmor\BGIBMGA001552   Bombyx mori Silkmoth  Bmor\BGIBMGA001553   Pediculus humanus Human body louse  Phum\PHUM399950   Tribolium castaneum Red flour beetle  Tcas\TC011007
Orthologs in non-Insect Arthropods (EOG6XKSNV)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\ND1   Ixodes scapularis Deer tick  Isca\ISCW000685
Orthologs in non-Arthropod Metazoa (EOG6K13F2)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\H06H21.10 Y Caenorhabditis elegans Nematode  Cele\tat-1 Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_004751gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_006111gn Y Danio rerio Zebrafish  Drer\ENSDARG00000079235 Y Danio rerio Zebrafish  Drer\ENSDARG00000079453 Y Danio rerio Zebrafish  Drer\si:ch211-180b7.2 Y Danio rerio Zebrafish  Drer\ENSDARG00000077492 Y Danio rerio Zebrafish  Drer\si:ch211-250o15.1 Y Danio rerio Zebrafish  Drer\atp8b2 Y Xenopus tropicalis Western clawed frog  Xtro\atp8b3 Y Xenopus tropicalis Western clawed frog  Xtro\ENSXETG00000020878 Y Xenopus tropicalis Western clawed frog  Xtro\atp8a1 Y Xenopus tropicalis Western clawed frog  Xtro\atp8b4 Y Xenopus tropicalis Western clawed frog  Xtro\atp8a2 Y Xenopus tropicalis Western clawed frog  Xtro\ENSXETG00000005302 Y Gallus gallus Domestic chicken  Ggal\LOC431656 Y Gallus gallus Domestic chicken  Ggal\ATP8A2 Y Gallus gallus Domestic chicken  Ggal\ATP8B3 Y Gallus gallus Domestic chicken  Ggal\ATP8B1 Y Gallus gallus Domestic chicken  Ggal\ATP8A1 Y Mus musculus House mouse  Mmus\Atp8b5 Y Mus musculus House mouse  Mmus\Atp8b3 Y Mus musculus House mouse  Mmus\Atp8b1 Y Mus musculus House mouse  Mmus\Atp8a1 Y Mus musculus House mouse  Mmus\Atp8a2 Y Mus musculus House mouse  Mmus\Atp8b4 Y Mus musculus House mouse  Mmus\Atp8b2 Y Rattus norvegicus Norway rat  Rnor\Atp8b4 Y Rattus norvegicus Norway rat  Rnor\ENSRNOG00000008053 Y Rattus norvegicus Norway rat  Rnor\Atp8b2 Y Rattus norvegicus Norway rat  Rnor\Atp8a1 Y Rattus norvegicus Norway rat  Rnor\Atp8b1 Y Rattus norvegicus Norway rat  Rnor\Atp8b3 Y Homo sapiens Human  Hsap\ATP8B4 Y Homo sapiens Human  Hsap\ATP8A1 Y Homo sapiens Human  Hsap\ENSG00000143515 Y Homo sapiens Human  Hsap\ATP8B1 Y Homo sapiens Human  Hsap\ATP8B3 Y Homo sapiens Human  Hsap\ENSG00000132932 Y
Human Orthologs (6)
Gene OMIM HGNC Hsap\ATP8B4     Hsap\ATP8A1     Hsap\ENSG00000143515     Hsap\ATP8B1     Hsap\ATP8B3     Hsap\ENSG00000132932
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD20604 Drosophila sechellia Dsec\GM26043 Drosophila erecta Dere\GG17161 Drosophila yakuba Dyak\GE24551 Drosophila ananassae Dana\GF17746 Drosophila pseudoobscura pseudoobscura Dpse\GA13214 Drosophila persimilis Dper\GL21577 Drosophila willistoni Dwil\GK25424 Drosophila virilis Dvir\GJ18766 Drosophila mojavensis Dmoj\GI14418 Drosophila grimshawi Dgri\GH24867
Stocks & Reagents
Stocks Listed in FlyBase ( 4 )
Bloomington	18847 w1118; PBac{WH}CG14741f05203 43090 y1 w*; Mi{MIC}CG14741MI06979
Harvard	- PBac{WH}CG14741f05203
VDRC	v102648 P{KK103739}VIE-260B
Genomic Clones ( 2 )
	BACR06O05 BACR48E12 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 21 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones	IP14033
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GM23677
Other clones	38445 56039 71738 108715 119721 156598 CK01.26A.C3 CK01.65A.D9 CK01.167C.E6 EK052915 EK103051 EK151642 EK167623 EK199512 EK245015 EK259563 EP03329 EP16342 MB6-CG14741.a
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0037989 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41469
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_169450 NM_001260138 NM_001260139 RefSeq (Proteins) • NP_731669 NP_001247067 NP_001247068 DDBJ / EMBL / GenBank • AAF54749 AFH06385 AFH06386 AFH06387 Entrez Gene - A searchable database of RefSeq genes. • 41469 UniProtKB/TrEMBL • Q9VGD4
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Cation-transporting P-type ATPase (IPR001757) Phospholipid-transporting P-type ATPase, subfamily IV (IPR006539) P-type ATPase, A domain (IPR008250) P-type ATPase, phosphorylation site (IPR018303) HAD-like domain (IPR023214) P-type ATPase, cytoplasmic domain N (IPR023299)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0037989 DRSC - Results from RNAi screens. • FBgn0037989 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0037989 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG14741-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0037989 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41469 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 41469 modMine - Data generated by the modENCODE project. • FBgn0037989
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG14741 (Ma et al., 2012, Keleman et al., 2009.8.5, Anholt and Williams, 2010)
Name Synonym
Secondary FlyBase IDs
References ( 13 )
Research paper	Ma et al., 2012, Genetics 190(4): 1299--1308 Membrane phospholipid asymmetry counters the adverse effects of sterol overloading in the Golgi membrane of Drosophila. [FBrf0217992] Anholt and Williams, 2010, Chem. Senses 35(1): 21--30 The soluble proteome of the Drosophila antenna. [FBrf0209552]
Supplementary material	Graveley et al., 2011, Nature 471(7339): Supplementary Table 33. Fuzzy Cluster Members. [FBrf0213980] The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Dietzl et al., 2007, Nature 448(7150): Supplementary Table 1. [FBrf0202579]
Personal communication to FlyBase	Bellen, 2012.12.17, set1016.xml set1016.xml [FBrf0220305] Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase. Exelixis insertion alleles that are not in FlyBase. [FBrf0179797] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase, 1992-, FlyBase curation. FlyBase curation. [FBrf0105495]
Curated genome annotation	FamiliarityBreedsContempt, 1999.11, [Automatic annotations performed at the Celera Jamboreee.] [Automatic annotations performed at the Celera Jamboreee.] [FBrf0126705] Ketchum, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126677]