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Gene Dmel\CG6234

General Information
Symbol	Dmel\CG6234	Species	D. melanogaster
Name		Annotation symbol	CG6234
Feature type	protein_coding_gene	FlyBase ID	FBgn0038071
Gene Model Status	Current	Stock availability	3 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	87C3-87C3	Sequence location	3R:8,473,782..8,478,635 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG6234 (FBgn0038071). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process: gastrulation. 3 alleles are reported. The phenotypes of these alleles are annotated with: embryonic head; germ band. It has one annotated transcript and one annotated polypeptide. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of very low expression. Peak expression observed within 00-18 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, larval central nervous system, larval/adult midgut, larval Malpighian tubules, larval fat body, larval trachea. Comments on Affy2 ProbeSet: ProbeSet 1640342_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG6234. Gene sequence location is 3R:8473782..8478635.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features HFA15998 BKN24464
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 87C3-87C3   Limits computationally determined from genome sequence between P{lacW}Vha55j2E9 and P{PZ}CtBP03463
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG6234 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG6234-RA FBtr0082648  NM_141963   2465   612
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG6234-PA   FBpp0082117   67.0   612   3.84     NP_650220   AAF54845
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014297 AAF54845   AI260469   AI297415   AI520363   AY052038 AAK93462   BG638983   BI172607   BI215430   BI227565   BI228586   BI235999   BI237025   BI237028   BI358524   BI370878   BI372390   BI373270   BI374869   BI376134   BI482711   BI580640   BT044191   CK657860   CO188733   CO310343   CO312259   CO315583   CO331948   EC064635   EC080649   EC083678   EC225214   EC226670   EC238376   EC239700   GH947400   GH949505   GH953646   GH958737   GH963846   GH965592   GH977872   GH983369
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q960I9 Q9VG45
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0038071    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0038071 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of very low expression. Peak expression observed within 00-18 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0038071 expression level Developmental Stage   Expression Level embryo 00-02hr    637 embryo 02-04hr    11462 embryo 04-06hr    21425 embryo 06-08hr    16810 embryo 08-10hr    14459 embryo 10-12hr    15294 embryo 12-14hr    14782 embryo 14-16hr    5817 embryo 16-18hr    1717 embryo 18-20hr    749 embryo 20-22hr    228 embryo 22-24hr    458 larva L1    146 larva L2    127 larva L3 12hr old    65 larva L3 puffstage 1-2    590 larva L3 puffstage 3-6    1943 larva L3 puffstage 7-9    5634 white prepupae new    9718 white prepupae 12hr    4859 white prepupae 24hr    7634 pupae 2d postWPP    5300 pupae 3d postWPP    1136 pupae 4d postWPP    384 adult male 01day    179 adult male 05day    113 adult male 30day    124 adult female 01day    175 adult female 05day    83 adult female 30day    116 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (637) embryo 02-04hr  (11462) embryo 04-06hr  (21425) embryo 06-08hr  (16810) embryo 08-10hr  (14459) embryo 10-12hr  (15294) embryo 12-14hr  (14782) embryo 14-16hr  (5817) embryo 16-18hr  (1717) embryo 18-20hr  (749) embryo 20-22hr  (228) embryo 22-24hr  (458) larva L1  (146) larva L2  (127) larva L3 12hr old    65 larva L3 puffstage 1-2  (590) larva L3 puffstage 3-6  (1943) larva L3 puffstage 7-9  (5634) white prepupae new  (9718) white prepupae 12hr  (4859) white prepupae 24hr  (7634) pupae 2d postWPP  (5300) pupae 3d postWPP  (1136) pupae 4d postWPP  (384) adult male 01day  (179) adult male 05day  (113) adult male 30day  (124) adult female 01day  (175) adult female 05day    83 adult female 30day  (116) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    637 embryo 02-04hr  (11462) embryo 04-06hr  (21425) embryo 06-08hr  (16810) embryo 08-10hr  (14459) embryo 10-12hr  (15294) embryo 12-14hr  (14782) embryo 14-16hr  (5817) embryo 16-18hr  (1717) embryo 18-20hr    749 embryo 20-22hr    228 embryo 22-24hr    458 larva L1    146 larva L2    127 larva L3 12hr old    65 larva L3 puffstage 1-2    590 larva L3 puffstage 3-6  (1943) larva L3 puffstage 7-9  (5634) white prepupae new  (9718) white prepupae 12hr  (4859) white prepupae 24hr  (7634) pupae 2d postWPP  (5300) pupae 3d postWPP    1136 pupae 4d postWPP    384 adult male 01day    179 adult male 05day    113 adult male 30day    124 adult female 01day    175 adult female 05day    83 adult female 30day    116 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    637 embryo 02-04hr  (11462) embryo 04-06hr  (21425) embryo 06-08hr  (16810) embryo 08-10hr  (14459) embryo 10-12hr  (15294) embryo 12-14hr  (14782) embryo 14-16hr    5817 embryo 16-18hr    1717 embryo 18-20hr    749 embryo 20-22hr    228 embryo 22-24hr    458 larva L1    146 larva L2    127 larva L3 12hr old    65 larva L3 puffstage 1-2    590 larva L3 puffstage 3-6    1943 larva L3 puffstage 7-9    5634 white prepupae new    9718 white prepupae 12hr    4859 white prepupae 24hr    7634 pupae 2d postWPP    5300 pupae 3d postWPP    1136 pupae 4d postWPP    384 adult male 01day    179 adult male 05day    113 adult male 30day    124 adult female 01day    175 adult female 05day    83 adult female 30day    116 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    637 embryo 02-04hr    11462 embryo 04-06hr    21425 embryo 06-08hr    16810 embryo 08-10hr    14459 embryo 10-12hr    15294 embryo 12-14hr    14782 embryo 14-16hr    5817 embryo 16-18hr    1717 embryo 18-20hr    749 embryo 20-22hr    228 embryo 22-24hr    458 larva L1    146 larva L2    127 larva L3 12hr old    65 larva L3 puffstage 1-2    590 larva L3 puffstage 3-6    1943 larva L3 puffstage 7-9    5634 white prepupae new    9718 white prepupae 12hr    4859 white prepupae 24hr    7634 pupae 2d postWPP    5300 pupae 3d postWPP    1136 pupae 4d postWPP    384 adult male 01day    179 adult male 05day    113 adult male 30day    124 adult female 01day    175 adult female 05day    83 adult female 30day    116 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0038071 expression level Developmental Stage   Expression Level embryo 00-02hr    637 embryo 02-04hr    11462 embryo 04-06hr    21425 embryo 06-08hr    16810 embryo 08-10hr    14459 embryo 10-12hr    15294 embryo 12-14hr    14782 embryo 14-16hr    5817 embryo 16-18hr    1717 embryo 18-20hr    749 embryo 20-22hr    228 embryo 22-24hr    458 larva L1    146 larva L2    127 larva L3 12hr old    65 larva L3 puffstage 1-2    590 larva L3 puffstage 3-6    1943 larva L3 puffstage 7-9    5634 white prepupae new    9718 white prepupae 12hr    4859 white prepupae 24hr    7634 pupae 2d postWPP    5300 pupae 3d postWPP    1136 pupae 4d postWPP    384 adult male 01day    179 adult male 05day    113 adult male 30day    124 adult female 01day    175 adult female 05day    83 adult female 30day    116 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (637) embryo 02-04hr  (11462) embryo 04-06hr  (21425) embryo 06-08hr  (16810) embryo 08-10hr  (14459) embryo 10-12hr  (15294) embryo 12-14hr  (14782) embryo 14-16hr  (5817) embryo 16-18hr  (1717) embryo 18-20hr  (749) embryo 20-22hr  (228) embryo 22-24hr  (458) larva L1  (146) larva L2  127 larva L3 12hr old    65 larva L3 puffstage 1-2  (590) larva L3 puffstage 3-6  (1943) larva L3 puffstage 7-9  (5634) white prepupae new  (9718) white prepupae 12hr  (4859) white prepupae 24hr  (7634) pupae 2d postWPP  (5300) pupae 3d postWPP  (1136) pupae 4d postWPP  (384) adult male 01day  (179) adult male 05day  113 adult male 30day  124 adult female 01day  (175) adult female 05day    83 adult female 30day  116 Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    637 embryo 02-04hr  (11462) embryo 04-06hr  (21425) embryo 06-08hr  (16810) embryo 08-10hr  (14459) embryo 10-12hr  (15294) embryo 12-14hr  (14782) embryo 14-16hr  (5817) embryo 16-18hr  1717 embryo 18-20hr    749 embryo 20-22hr    228 embryo 22-24hr    458 larva L1    146 larva L2    127 larva L3 12hr old    65 larva L3 puffstage 1-2    590 larva L3 puffstage 3-6  1943 larva L3 puffstage 7-9  (5634) white prepupae new  (9718) white prepupae 12hr  (4859) white prepupae 24hr  (7634) pupae 2d postWPP  (5300) pupae 3d postWPP    1136 pupae 4d postWPP    384 adult male 01day    179 adult male 05day    113 adult male 30day    124 adult female 01day    175 adult female 05day    83 adult female 30day    116 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    637 embryo 02-04hr  11462 embryo 04-06hr  (21425) embryo 06-08hr  16810 embryo 08-10hr  14459 embryo 10-12hr  15294 embryo 12-14hr  14782 embryo 14-16hr    5817 embryo 16-18hr    1717 embryo 18-20hr    749 embryo 20-22hr    228 embryo 22-24hr    458 larva L1    146 larva L2    127 larva L3 12hr old    65 larva L3 puffstage 1-2    590 larva L3 puffstage 3-6    1943 larva L3 puffstage 7-9    5634 white prepupae new    9718 white prepupae 12hr    4859 white prepupae 24hr    7634 pupae 2d postWPP    5300 pupae 3d postWPP    1136 pupae 4d postWPP    384 adult male 01day    179 adult male 05day    113 adult male 30day    124 adult female 01day    175 adult female 05day    83 adult female 30day    116 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    637 embryo 02-04hr    11462 embryo 04-06hr    21425 embryo 06-08hr    16810 embryo 08-10hr    14459 embryo 10-12hr    15294 embryo 12-14hr    14782 embryo 14-16hr    5817 embryo 16-18hr    1717 embryo 18-20hr    749 embryo 20-22hr    228 embryo 22-24hr    458 larva L1    146 larva L2    127 larva L3 12hr old    65 larva L3 puffstage 1-2    590 larva L3 puffstage 3-6    1943 larva L3 puffstage 7-9    5634 white prepupae new    9718 white prepupae 12hr    4859 white prepupae 24hr    7634 pupae 2d postWPP    5300 pupae 3d postWPP    1136 pupae 4d postWPP    384 adult male 01day    179 adult male 05day    113 adult male 30day    124 adult female 01day    175 adult female 05day    83 adult female 30day    116 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0038071    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0038071 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, larval central nervous system, larval/adult midgut, larval Malpighian tubules, larval fat body, larval trachea. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0038071 expression level Tissue   Expression Level Larval Central Nervous System    496.475 Larval Midgut    122.8 Larval Hindgut    48.3 Larval Malpighian Tubules    116.1 Larval Fat Body    190 Larval Salivary Gland no informative data Larval Trachea    158.875 Larval Carcass    58.525 Adult Head    47.8 Adult Eye    110.3 Adult Brain no informative data Adult Thoracic-Abdominal Ganglion    9.9 Adult Crop no informative data Adult Midgut    142.6 Adult Hindgut no informative data Adult Malpighian Tubules    4.9 Adult Fat Body    7.1 Adult Salivary Gland no informative data Adult Heart    3.775 Adult VirginFemale Spermatheca    7.4 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    2.2 Adult Testis    4.1 Adult Male Accessory Gland no informative data Adult Carcass    1.7 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    496.475 Larval Midgut    122.8 Larval Hindgut    48.3 Larval Malpighian Tubules    116.1 Larval Fat Body    190 Larval Salivary Gland no informative data Larval Trachea    158.875 Larval Carcass    58.525 Adult Head    47.8 Adult Eye    110.3 Adult Brain no informative data Adult Thoracic-Abdominal Ganglion    9.9 Adult Crop no informative data Adult Midgut    142.6 Adult Hindgut no informative data Adult Malpighian Tubules    4.9 Adult Fat Body    7.1 Adult Salivary Gland no informative data Adult Heart    3.775 Adult VirginFemale Spermatheca    7.4 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    2.2 Adult Testis    4.1 Adult Male Accessory Gland no informative data Adult Carcass    1.7 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    496.475 Larval Midgut    122.8 Larval Hindgut    48.3 Larval Malpighian Tubules    116.1 Larval Fat Body    190 Larval Salivary Gland no informative data Larval Trachea    158.875 Larval Carcass    58.525 Adult Head    47.8 Adult Eye    110.3 Adult Brain no informative data Adult Thoracic-Abdominal Ganglion    9.9 Adult Crop no informative data Adult Midgut    142.6 Adult Hindgut no informative data Adult Malpighian Tubules    4.9 Adult Fat Body    7.1 Adult Salivary Gland no informative data Adult Heart    3.775 Adult VirginFemale Spermatheca    7.4 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    2.2 Adult Testis    4.1 Adult Male Accessory Gland no informative data Adult Carcass    1.7 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    496.475 Larval Midgut    122.8 Larval Hindgut    48.3 Larval Malpighian Tubules    116.1 Larval Fat Body    190 Larval Salivary Gland no informative data Larval Trachea    158.875 Larval Carcass    58.525 Adult Head    47.8 Adult Eye    110.3 Adult Brain no informative data Adult Thoracic-Abdominal Ganglion    9.9 Adult Crop no informative data Adult Midgut    142.6 Adult Hindgut no informative data Adult Malpighian Tubules    4.9 Adult Fat Body    7.1 Adult Salivary Gland no informative data Adult Heart    3.775 Adult VirginFemale Spermatheca    7.4 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    2.2 Adult Testis    4.1 Adult Male Accessory Gland no informative data Adult Carcass    1.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0038071 expression level Tissue   Expression Level Larval Central Nervous System    496.475 Larval Midgut    122.8 Larval Hindgut    48.3 Larval Malpighian Tubules    116.1 Larval Fat Body    190 Larval Salivary Gland no informative data Larval Trachea    158.875 Larval Carcass    58.525 Adult Head    47.8 Adult Eye    110.3 Adult Brain no informative data Adult Thoracic-Abdominal Ganglion    9.9 Adult Crop no informative data Adult Midgut    142.6 Adult Hindgut no informative data Adult Malpighian Tubules    4.9 Adult Fat Body    7.1 Adult Salivary Gland no informative data Adult Heart    3.775 Adult VirginFemale Spermatheca    7.4 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    2.2 Adult Testis    4.1 Adult Male Accessory Gland no informative data Adult Carcass    1.7 Expression Level Scale  None   Low   Moderate   High  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    496.475 Larval Midgut    122.8 Larval Hindgut    48.3 Larval Malpighian Tubules    116.1 Larval Fat Body    190 Larval Salivary Gland no informative data Larval Trachea    158.875 Larval Carcass    58.525 Adult Head    47.8 Adult Eye    110.3 Adult Brain no informative data Adult Thoracic-Abdominal Ganglion    9.9 Adult Crop no informative data Adult Midgut    142.6 Adult Hindgut no informative data Adult Malpighian Tubules    4.9 Adult Fat Body    7.1 Adult Salivary Gland no informative data Adult Heart    3.775 Adult VirginFemale Spermatheca    7.4 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    2.2 Adult Testis    4.1 Adult Male Accessory Gland no informative data Adult Carcass    1.7 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    496.475 Larval Midgut    122.8 Larval Hindgut    48.3 Larval Malpighian Tubules    116.1 Larval Fat Body    190 Larval Salivary Gland no informative data Larval Trachea    158.875 Larval Carcass    58.525 Adult Head    47.8 Adult Eye    110.3 Adult Brain no informative data Adult Thoracic-Abdominal Ganglion    9.9 Adult Crop no informative data Adult Midgut    142.6 Adult Hindgut no informative data Adult Malpighian Tubules    4.9 Adult Fat Body    7.1 Adult Salivary Gland no informative data Adult Heart    3.775 Adult VirginFemale Spermatheca    7.4 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    2.2 Adult Testis    4.1 Adult Male Accessory Gland no informative data Adult Carcass    1.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    496.475 Larval Midgut    122.8 Larval Hindgut    48.3 Larval Malpighian Tubules    116.1 Larval Fat Body    190 Larval Salivary Gland no informative data Larval Trachea    158.875 Larval Carcass    58.525 Adult Head    47.8 Adult Eye    110.3 Adult Brain no informative data Adult Thoracic-Abdominal Ganglion    9.9 Adult Crop no informative data Adult Midgut    142.6 Adult Hindgut no informative data Adult Malpighian Tubules    4.9 Adult Fat Body    7.1 Adult Salivary Gland no informative data Adult Heart    3.775 Adult VirginFemale Spermatheca    7.4 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    2.2 Adult Testis    4.1 Adult Male Accessory Gland no informative data Adult Carcass    1.7 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland no informative data Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain no informative data Adult Thoracic-Abdominal Ganglion     Adult Crop no informative data Adult Midgut     Adult Hindgut no informative data Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland no informative data Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca no informative data Adult Ovary     Adult Testis     Adult Male Accessory Gland no informative data Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    47.8   NA  Eye    110.3   NA  Brain    no informative data   496.475  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    9.9   NA  Crop    no informative data   122.8  Midgut    142.6   48.3  Hindgut    no informative data   116.1  Malpighian Tubules    4.9   190  Fat Body    7.1   no informative data  Salivary Gland    no informative data   NA  Heart    3.775   158.875  Trachea    NA   NA  VirginFemale Spermatheca    7.4   NA  InseminatedFemale Spermatheca    no informative data   NA  Ovary    2.2   NA  Testis    4.1   NA  Male Accessory Gland    no informative data   58.525  Carcass    1.7 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_30
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0038071 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6234-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Phenotype manifest in Allele embryonic head, with Scer\GAL4nos.PG CG6234dsRNA.Scer\UAS germ band, with Scer\GAL4nos.PG CG6234dsRNA.Scer\UAS
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CG6234 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG6234 Class Mutagen Stocks Known lesion CG6234GD2956 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG6234KK105328 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG6234dsRNA.Scer\UAS in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel8156 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD2956} NA P{KK105328} NA
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 3 terms )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
gastrulation inferred from expression pattern (Gonzalez-Aguero et al., 2005)
Cellular Component
CV term Evidence References
cell surface inferred from direct assay (Zúñiga et al., 2009) vesicle inferred from direct assay (Zúñiga et al., 2009)
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG6234 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0038071 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 41558
Orthologs
Genome-wide drosophilid orthologs	Dana\GF17112 Dere\GG19127 Dgri\GH18703 Dmoj\GI22850 Dper\GL27146 Dpse\GA19462 Dsec\GM24053 Dsim\GD18852 Dvir\GJ14151 Dwil\GK13722 Dyak\GE26211
Curated drosophilid orthologs	Dpse\GA19462
Linkouts	OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0243244 FBgn0215730 FBgn0201369 FBgn0190365 FBgn0178918 FBgn0079458 FBgn0164727 FBgn0145577 FBgn0126170 FBgn0111333 FBgn0094131
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
VDRC	v101649 P{KK105328}VIE-260B v51527 w1118; P{GD2956}v51527 v51528 w1118; P{GD2956}v51528
Genomic Clones ( 1 )
	BACR07J06 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 39 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LP04345
Other clones	FI05209
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	LP11710 LP24481 RE15140 RE21830 RE24649 RE26169 RE31975 RE33169 RE33172 RE45311 RE57647 RE59342 RE60527 RE62554 RE64067 RE65441 RE74857
Other clones	21266 98169 101289 158862 274546 CK01.50D.F7 EK041724 EK221258 EK228262 EK261925 EK302062 LD40502 RP004025381 RP004125960 RP004184102 RP004209321 RP004210544 RP004275318 RP004490031 RP004511372
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0038071 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41558
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
	dsRNA has been made from templates generated with primers directed against this gene. (Pilot et al., 2006)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_141963 RefSeq (Proteins) • NP_650220 DDBJ / EMBL / GenBank • AAF54845 AAK93462 AI260469 AY052038 Entrez Gene - A searchable database of RefSeq genes. • 41558 UniProtKB/TrEMBL • Q9VG45 Q960I9
Other Crossreferences
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0038071 DRSC - Results from RNAi screens. • FBgn0038071 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0038071 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6234-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0038071 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41558 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 41558 modMine - Data generated by the modENCODE project. • FBgn0038071 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0243244 FBgn0215730 FBgn0201369 FBgn0190365 FBgn0178918 FBgn0079458 FBgn0164727 FBgn0145577 FBgn0126170 FBgn0111333 FBgn0094131
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG6234 (Fang et al., 2006, Pilot et al., 2006, Blauwkamp et al., 2008, Keleman et al., 2009.8.5, Li et al., 2007, Zúñiga et al., 2009, Mohan et al., 2010, Buechling et al., 2010, Song et al., 2010, Bhambhani et al., 2011)
Name Synonym
Secondary FlyBase IDs
References ( 21 )
Generate a list of	All references relating to this gene ( 21 )
List References by type	Research paper  ( 13 ) Supplementary material  ( 1 ) Personal communication to FlyBase  ( 3 ) FlyBase analysis  ( 1 ) Computer file  ( 1 ) Automatic genome annotation  ( 1 )
Recent research papers ( 5 )
	Bhambhani et al., 2011, EMBO J. 30(10): 2031--2043 The oligomeric state of CtBP determines its role as a transcriptional co-activator and co-repressor of Wingless targets. [FBrf0213805] Blanco et al., 2010, BMC Dev. Biol. 10: 94 Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812] Buechling et al., 2010, Curr. Biol. 20(14): 1263--1268 Wnt/Frizzled Signaling Requires dPRR, the Drosophila Homolog of the Prorenin Receptor. [FBrf0211368] Mohan et al., 2010, Genes Dev. 24(6): 574--589 Linking H3K79 trimethylation to Wnt signaling through a novel Dot1-containing complex (DotCom). [FBrf0210203] Song et al., 2010, Genes Dev. 24(9): 881--886 Coop functions as a corepressor of Pangolin and antagonizes Wingless signaling. [FBrf0213249] Show all research papers ...