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Gene Dmel\CG7987

General Information
Symbol	Dmel\CG7987	Species	D. melanogaster
Name		Annotation symbol	CG7987
Feature type	protein_coding_gene	FlyBase ID	FBgn0038244
Gene Model Status	Current	Stock availability	5 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	88C6-88C6	Sequence location	3R:10,396,194..10,401,570 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG7987 (FBgn0038244). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: zinc ion binding; nucleic acid binding. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Zinc finger, C2H2; Zinc finger, C2H2-like; Zinc finger, C2H2-type/integrase, DNA-binding. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, adult crop, larval/adult hindgut, adult fat body, larval/adult salivary gland, adult female reproductive system, adult male accessory gland, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1636867_s_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of CG7987. Gene sequence location is 3R:10396194..10401570.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features HFA16357 BKN25327
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 88C6-88C6   Limits computationally determined from genome sequence between P{PZ}cv-c06951 and P{PZ}put10460
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG7987 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG7987-RA FBtr0082978  NM_142118   4203   1283 CG7987-RB FBtr0082979  NM_169587   4377   1283
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG7987-PA   FBpp0082437   141.9   1283   6.85     NP_650375   AAF55075 CG7987-PB   FBpp0082438   141.9   1283   6.85     NP_731922   AAF55074
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, C2H2 (IPR007087) Zinc finger, C2H2-type/integrase, DNA-binding (IPR013087) Zinc finger, C2H2-like (IPR015880)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA247031   AA264471   AA820538   AE014297 AAF55074   AE014297 AAF55075   AI064098   AI135263   AI259059   AI388155   AI455159   AI455450   AI513040   AI516073   AI518488   AI532468   AI534769   AI534884   AI534941   AI542997   AW944169   AX094121   AY094956 AAM11309   BG633043   BI142065   BI483409   BI637188   BT024230   CK660445   CO275878   CO277978   CO340439   EC084012   EC086771   EC206112   EC237799   EC243328   EC255845   GH943935   GH946349   GH949066   GH950020   GH950135   GH951453   GH951662   GH955244   GH961650   GH962805   GH968991   GH974491   GH976967
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8T3L3 Q29R10
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0038244    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0038244 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0038244 expression level Developmental Stage   Expression Level embryo 00-02hr    4863 embryo 02-04hr    1153 embryo 04-06hr    1125 embryo 06-08hr    1700 embryo 08-10hr    1878 embryo 10-12hr    2095 embryo 12-14hr    1507 embryo 14-16hr    1294 embryo 16-18hr    1159 embryo 18-20hr    1119 embryo 20-22hr    1534 embryo 22-24hr    1510 larva L1    1947 larva L2    1085 larva L3 12hr old    965 larva L3 puffstage 1-2    760 larva L3 puffstage 3-6    1029 larva L3 puffstage 7-9    1064 white prepupae new    1028 white prepupae 12hr    1129 white prepupae 24hr    1367 pupae 2d postWPP    1143 pupae 3d postWPP    1032 pupae 4d postWPP    755 adult male 01day    1099 adult male 05day    1151 adult male 30day    1063 adult female 01day    2410 adult female 05day    3645 adult female 30day    3555 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (4863) embryo 02-04hr  (1153) embryo 04-06hr  (1125) embryo 06-08hr  (1700) embryo 08-10hr  (1878) embryo 10-12hr  (2095) embryo 12-14hr  (1507) embryo 14-16hr  (1294) embryo 16-18hr  (1159) embryo 18-20hr  (1119) embryo 20-22hr  (1534) embryo 22-24hr  (1510) larva L1  (1947) larva L2  (1085) larva L3 12hr old  (965) larva L3 puffstage 1-2  (760) larva L3 puffstage 3-6  (1029) larva L3 puffstage 7-9  (1064) white prepupae new  (1028) white prepupae 12hr  (1129) white prepupae 24hr  (1367) pupae 2d postWPP  (1143) pupae 3d postWPP  (1032) pupae 4d postWPP  (755) adult male 01day  (1099) adult male 05day  (1151) adult male 30day  (1063) adult female 01day  (2410) adult female 05day  (3645) adult female 30day  (3555) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (4863) embryo 02-04hr    1153 embryo 04-06hr    1125 embryo 06-08hr  (1700) embryo 08-10hr  (1878) embryo 10-12hr  (2095) embryo 12-14hr  1507 embryo 14-16hr    1294 embryo 16-18hr    1159 embryo 18-20hr    1119 embryo 20-22hr  (1534) embryo 22-24hr  (1510) larva L1  (1947) larva L2    1085 larva L3 12hr old    965 larva L3 puffstage 1-2    760 larva L3 puffstage 3-6    1029 larva L3 puffstage 7-9    1064 white prepupae new    1028 white prepupae 12hr    1129 white prepupae 24hr    1367 pupae 2d postWPP    1143 pupae 3d postWPP    1032 pupae 4d postWPP    755 adult male 01day    1099 adult male 05day    1151 adult male 30day    1063 adult female 01day  (2410) adult female 05day  (3645) adult female 30day  (3555) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    4863 embryo 02-04hr    1153 embryo 04-06hr    1125 embryo 06-08hr    1700 embryo 08-10hr    1878 embryo 10-12hr    2095 embryo 12-14hr    1507 embryo 14-16hr    1294 embryo 16-18hr    1159 embryo 18-20hr    1119 embryo 20-22hr    1534 embryo 22-24hr    1510 larva L1    1947 larva L2    1085 larva L3 12hr old    965 larva L3 puffstage 1-2    760 larva L3 puffstage 3-6    1029 larva L3 puffstage 7-9    1064 white prepupae new    1028 white prepupae 12hr    1129 white prepupae 24hr    1367 pupae 2d postWPP    1143 pupae 3d postWPP    1032 pupae 4d postWPP    755 adult male 01day    1099 adult male 05day    1151 adult male 30day    1063 adult female 01day    2410 adult female 05day    3645 adult female 30day    3555 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    4863 embryo 02-04hr    1153 embryo 04-06hr    1125 embryo 06-08hr    1700 embryo 08-10hr    1878 embryo 10-12hr    2095 embryo 12-14hr    1507 embryo 14-16hr    1294 embryo 16-18hr    1159 embryo 18-20hr    1119 embryo 20-22hr    1534 embryo 22-24hr    1510 larva L1    1947 larva L2    1085 larva L3 12hr old    965 larva L3 puffstage 1-2    760 larva L3 puffstage 3-6    1029 larva L3 puffstage 7-9    1064 white prepupae new    1028 white prepupae 12hr    1129 white prepupae 24hr    1367 pupae 2d postWPP    1143 pupae 3d postWPP    1032 pupae 4d postWPP    755 adult male 01day    1099 adult male 05day    1151 adult male 30day    1063 adult female 01day    2410 adult female 05day    3645 adult female 30day    3555 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0038244 expression level Developmental Stage   Expression Level embryo 00-02hr    4863 embryo 02-04hr    1153 embryo 04-06hr    1125 embryo 06-08hr    1700 embryo 08-10hr    1878 embryo 10-12hr    2095 embryo 12-14hr    1507 embryo 14-16hr    1294 embryo 16-18hr    1159 embryo 18-20hr    1119 embryo 20-22hr    1534 embryo 22-24hr    1510 larva L1    1947 larva L2    1085 larva L3 12hr old    965 larva L3 puffstage 1-2    760 larva L3 puffstage 3-6    1029 larva L3 puffstage 7-9    1064 white prepupae new    1028 white prepupae 12hr    1129 white prepupae 24hr    1367 pupae 2d postWPP    1143 pupae 3d postWPP    1032 pupae 4d postWPP    755 adult male 01day    1099 adult male 05day    1151 adult male 30day    1063 adult female 01day    2410 adult female 05day    3645 adult female 30day    3555 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (4863) embryo 02-04hr  (1153) embryo 04-06hr  (1125) embryo 06-08hr  (1700) embryo 08-10hr  (1878) embryo 10-12hr  (2095) embryo 12-14hr  (1507) embryo 14-16hr  (1294) embryo 16-18hr  (1159) embryo 18-20hr  (1119) embryo 20-22hr  (1534) embryo 22-24hr  (1510) larva L1  (1947) larva L2  (1085) larva L3 12hr old  (965) larva L3 puffstage 1-2  (760) larva L3 puffstage 3-6  (1029) larva L3 puffstage 7-9  (1064) white prepupae new  (1028) white prepupae 12hr  (1129) white prepupae 24hr  (1367) pupae 2d postWPP  (1143) pupae 3d postWPP  (1032) pupae 4d postWPP  (755) adult male 01day  (1099) adult male 05day  (1151) adult male 30day  (1063) adult female 01day  (2410) adult female 05day  (3645) adult female 30day  (3555) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (4863) embryo 02-04hr    1153 embryo 04-06hr    1125 embryo 06-08hr  1700 embryo 08-10hr  1878 embryo 10-12hr  2095 embryo 12-14hr  1507 embryo 14-16hr    1294 embryo 16-18hr    1159 embryo 18-20hr    1119 embryo 20-22hr  1534 embryo 22-24hr  1510 larva L1  1947 larva L2    1085 larva L3 12hr old    965 larva L3 puffstage 1-2    760 larva L3 puffstage 3-6    1029 larva L3 puffstage 7-9    1064 white prepupae new    1028 white prepupae 12hr    1129 white prepupae 24hr    1367 pupae 2d postWPP    1143 pupae 3d postWPP    1032 pupae 4d postWPP    755 adult male 01day    1099 adult male 05day    1151 adult male 30day    1063 adult female 01day  2410 adult female 05day  (3645) adult female 30day  (3555) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    4863 embryo 02-04hr    1153 embryo 04-06hr    1125 embryo 06-08hr    1700 embryo 08-10hr    1878 embryo 10-12hr    2095 embryo 12-14hr    1507 embryo 14-16hr    1294 embryo 16-18hr    1159 embryo 18-20hr    1119 embryo 20-22hr    1534 embryo 22-24hr    1510 larva L1    1947 larva L2    1085 larva L3 12hr old    965 larva L3 puffstage 1-2    760 larva L3 puffstage 3-6    1029 larva L3 puffstage 7-9    1064 white prepupae new    1028 white prepupae 12hr    1129 white prepupae 24hr    1367 pupae 2d postWPP    1143 pupae 3d postWPP    1032 pupae 4d postWPP    755 adult male 01day    1099 adult male 05day    1151 adult male 30day    1063 adult female 01day    2410 adult female 05day    3645 adult female 30day    3555 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    4863 embryo 02-04hr    1153 embryo 04-06hr    1125 embryo 06-08hr    1700 embryo 08-10hr    1878 embryo 10-12hr    2095 embryo 12-14hr    1507 embryo 14-16hr    1294 embryo 16-18hr    1159 embryo 18-20hr    1119 embryo 20-22hr    1534 embryo 22-24hr    1510 larva L1    1947 larva L2    1085 larva L3 12hr old    965 larva L3 puffstage 1-2    760 larva L3 puffstage 3-6    1029 larva L3 puffstage 7-9    1064 white prepupae new    1028 white prepupae 12hr    1129 white prepupae 24hr    1367 pupae 2d postWPP    1143 pupae 3d postWPP    1032 pupae 4d postWPP    755 adult male 01day    1099 adult male 05day    1151 adult male 30day    1063 adult female 01day    2410 adult female 05day    3645 adult female 30day    3555 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0038244    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0038244 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, adult crop, larval/adult hindgut, adult fat body, larval/adult salivary gland, adult female reproductive system, adult male accessory gland, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0038244 expression level Tissue   Expression Level Larval Central Nervous System    160.5 Larval Midgut    79.6 Larval Hindgut    100.6 Larval Malpighian Tubules    81 Larval Fat Body    57.7 Larval Salivary Gland    110.6 Larval Trachea    98.5 Larval Carcass    131.075 Adult Head    88.5 Adult Eye    94.2 Adult Brain    173.7 Adult Thoracic-Abdominal Ganglion    140.1 Adult Crop    104 Adult Midgut    81.2 Adult Hindgut    100 Adult Malpighian Tubules    93.2 Adult Fat Body    103.1 Adult Salivary Gland    123.4 Adult Heart    76.55 Adult VirginFemale Spermatheca    136.1 Adult InseminatedFemale Spermatheca    106.1 Adult Ovary    267.6 Adult Testis    64.2 Adult Male Accessory Gland    112.1 Adult Carcass    111.7 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    160.5 Larval Midgut    79.6 Larval Hindgut    100.6 Larval Malpighian Tubules    81 Larval Fat Body    57.7 Larval Salivary Gland    110.6 Larval Trachea    98.5 Larval Carcass    131.075 Adult Head    88.5 Adult Eye    94.2 Adult Brain    173.7 Adult Thoracic-Abdominal Ganglion    140.1 Adult Crop    104 Adult Midgut    81.2 Adult Hindgut    100 Adult Malpighian Tubules    93.2 Adult Fat Body    103.1 Adult Salivary Gland    123.4 Adult Heart    76.55 Adult VirginFemale Spermatheca    136.1 Adult InseminatedFemale Spermatheca    106.1 Adult Ovary    267.6 Adult Testis    64.2 Adult Male Accessory Gland    112.1 Adult Carcass    111.7 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    160.5 Larval Midgut    79.6 Larval Hindgut    100.6 Larval Malpighian Tubules    81 Larval Fat Body    57.7 Larval Salivary Gland    110.6 Larval Trachea    98.5 Larval Carcass    131.075 Adult Head    88.5 Adult Eye    94.2 Adult Brain    173.7 Adult Thoracic-Abdominal Ganglion    140.1 Adult Crop    104 Adult Midgut    81.2 Adult Hindgut    100 Adult Malpighian Tubules    93.2 Adult Fat Body    103.1 Adult Salivary Gland    123.4 Adult Heart    76.55 Adult VirginFemale Spermatheca    136.1 Adult InseminatedFemale Spermatheca    106.1 Adult Ovary    267.6 Adult Testis    64.2 Adult Male Accessory Gland    112.1 Adult Carcass    111.7 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    160.5 Larval Midgut    79.6 Larval Hindgut    100.6 Larval Malpighian Tubules    81 Larval Fat Body    57.7 Larval Salivary Gland    110.6 Larval Trachea    98.5 Larval Carcass    131.075 Adult Head    88.5 Adult Eye    94.2 Adult Brain    173.7 Adult Thoracic-Abdominal Ganglion    140.1 Adult Crop    104 Adult Midgut    81.2 Adult Hindgut    100 Adult Malpighian Tubules    93.2 Adult Fat Body    103.1 Adult Salivary Gland    123.4 Adult Heart    76.55 Adult VirginFemale Spermatheca    136.1 Adult InseminatedFemale Spermatheca    106.1 Adult Ovary    267.6 Adult Testis    64.2 Adult Male Accessory Gland    112.1 Adult Carcass    111.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0038244 expression level Tissue   Expression Level Larval Central Nervous System    160.5 Larval Midgut    79.6 Larval Hindgut    100.6 Larval Malpighian Tubules    81 Larval Fat Body    57.7 Larval Salivary Gland    110.6 Larval Trachea    98.5 Larval Carcass    131.075 Adult Head    88.5 Adult Eye    94.2 Adult Brain    173.7 Adult Thoracic-Abdominal Ganglion    140.1 Adult Crop    104 Adult Midgut    81.2 Adult Hindgut    100 Adult Malpighian Tubules    93.2 Adult Fat Body    103.1 Adult Salivary Gland    123.4 Adult Heart    76.55 Adult VirginFemale Spermatheca    136.1 Adult InseminatedFemale Spermatheca    106.1 Adult Ovary    267.6 Adult Testis    64.2 Adult Male Accessory Gland    112.1 Adult Carcass    111.7 Expression Level Scale  None   Low   Moderate  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    160.5 Larval Midgut    79.6 Larval Hindgut    100.6 Larval Malpighian Tubules    81 Larval Fat Body    57.7 Larval Salivary Gland    110.6 Larval Trachea    98.5 Larval Carcass    131.075 Adult Head    88.5 Adult Eye    94.2 Adult Brain    173.7 Adult Thoracic-Abdominal Ganglion    140.1 Adult Crop    104 Adult Midgut    81.2 Adult Hindgut    100 Adult Malpighian Tubules    93.2 Adult Fat Body    103.1 Adult Salivary Gland    123.4 Adult Heart    76.55 Adult VirginFemale Spermatheca    136.1 Adult InseminatedFemale Spermatheca    106.1 Adult Ovary    267.6 Adult Testis    64.2 Adult Male Accessory Gland    112.1 Adult Carcass    111.7 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    160.5 Larval Midgut    79.6 Larval Hindgut    100.6 Larval Malpighian Tubules    81 Larval Fat Body    57.7 Larval Salivary Gland    110.6 Larval Trachea    98.5 Larval Carcass    131.075 Adult Head    88.5 Adult Eye    94.2 Adult Brain    173.7 Adult Thoracic-Abdominal Ganglion    140.1 Adult Crop    104 Adult Midgut    81.2 Adult Hindgut    100 Adult Malpighian Tubules    93.2 Adult Fat Body    103.1 Adult Salivary Gland    123.4 Adult Heart    76.55 Adult VirginFemale Spermatheca    136.1 Adult InseminatedFemale Spermatheca    106.1 Adult Ovary    267.6 Adult Testis    64.2 Adult Male Accessory Gland    112.1 Adult Carcass    111.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    160.5 Larval Midgut    79.6 Larval Hindgut    100.6 Larval Malpighian Tubules    81 Larval Fat Body    57.7 Larval Salivary Gland    110.6 Larval Trachea    98.5 Larval Carcass    131.075 Adult Head    88.5 Adult Eye    94.2 Adult Brain    173.7 Adult Thoracic-Abdominal Ganglion    140.1 Adult Crop    104 Adult Midgut    81.2 Adult Hindgut    100 Adult Malpighian Tubules    93.2 Adult Fat Body    103.1 Adult Salivary Gland    123.4 Adult Heart    76.55 Adult VirginFemale Spermatheca    136.1 Adult InseminatedFemale Spermatheca    106.1 Adult Ovary    267.6 Adult Testis    64.2 Adult Male Accessory Gland    112.1 Adult Carcass    111.7 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    88.5   NA  Eye    94.2   NA  Brain    173.7   160.5  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    140.1   NA  Crop    104   79.6  Midgut    81.2   100.6  Hindgut    100   81  Malpighian Tubules    93.2   57.7  Fat Body    103.1   110.6  Salivary Gland    123.4   NA  Heart    76.55   98.5  Trachea    NA   NA  VirginFemale Spermatheca    136.1   NA  InseminatedFemale Spermatheca    106.1   NA  Ovary    267.6   NA  Testis    64.2   NA  Male Accessory Gland    112.1   131.075  Carcass    111.7 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_13
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0038244 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG7987-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG7987 Stages(s) 4-6 Stages(s) 7-8 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG7987GD12343 Phenotype manifest in Allele
Classical Alleles ( 2 )
For All Classical Alleles Show
Allele of CG7987 Class Mutagen Stocks Known lesion CG7987EY22125 P-element activity 1 -- CG7987MB01525 1 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG7987 Class Mutagen Stocks Known lesion CG7987GD12343 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG7987KK104367 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD12343} NA P{KK104367} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EPgy2}CG7987EY22125 NA insertion of enhancer trap binary system Mi{ET1}CG7987MB01525 No
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
nucleic acid binding inferred from electronic annotation with InterPro:IPR013087 (FlyBase Curators et al., 2004-) zinc ion binding inferred from electronic annotation with InterPro:IPR007087, InterPro:IPR015880 (FlyBase Curators et al., 2004-)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
intracellular inferred from electronic annotation with InterPro:IPR007087, InterPro:IPR015880 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG7987 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 66843 DroID - A comprehensive database of gene and protein interactions. • FBgn0038244 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 41768
Orthologs
Genome-wide drosophilid orthologs	Dana\GF17472 Dere\GG21197 Dgri\GH14127 Dmoj\GI10657 Dper\GL24170 Dpse\GA20743 Dsec\GM25840 Dsim\GD20411 Dvir\GJ23014 Dwil\GK11348 Dyak\GE26438
Curated drosophilid orthologs	Dpse\GA20743
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL001910-PA Aedes aegypti (mosquito) AGAP008984-PA Anopheles gambiae (mosquito) XP_001945030.1 Acyrthosiphon pisum (pea aphid) BGIBMGA005450-PA Bombyx mori (silk worm) CPIJ010966 Culex pipens (mosquito) ENSCPOP00000004708 Cavia porcellus (guinea pig) DEHA2B03586g Debaryomyces Hansenii (yeast) XP_001603852.1 Nasonia vitripennis (wasp) PHUM000977-PA Pediculus humanus (human body louse) XP_001810857.1 Tribolium castaneum (red flour beetle) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB18467 PB18466 NV12426 LH20121 FBgn0243460 FBgn0213359 FBgn0210116 FBgn0191883 FBgn0180696 FBgn0176923 FBgn0174517 FBgn0080734 FBgn0161760 FBgn0133421 FBgn0121603 FBgn0113377 FBgn0094490 CPIJ010967 CPIJ010966 BGIBMGA005450 ACYPI56069 ACYPI000462 GB19521 AGAP008984 AAEL001910 PHUM320330 GLEAN_12655
Stocks & Reagents
Stocks Listed in FlyBase ( 5 )
Bloomington	23330 y1 w67c23; Mi{ET1}CG7987MB01525 22538 y1 w67c23; P{EPgy2}CG7987EY22125
VDRC	v100631 P{KK104367}VIE-260B v22647 w1118; P{GD12343}v22647 v22649 w1118; P{GD12343}v22649
Genomic Clones ( 1 )
	BACR45M03 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 42 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD24322 SD01232
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH04360 GH12935 LD06134 LD08948 LD21508 LD38021 LD41822 LD45256 LP02382 LP19044 RE66306 SD01150 SD04003 SD07777 SD09549 SD16062 SD19132
Other clones	16542 74704 125796 214565.27 CK01.11A.F2 CK01.142B.H9 EK119029 EK127946 EP10646 GH18963 RP004101587 RP004155589 RP004160913 RP004176416 RP004177728 RP004189956 RP004222383 RP004244283 RP004305978 RP004362423 RP004447687 RP004521225 RP004532409
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0038244 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41768
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG7987 anon-WO0118547.245 (FlyBase, 1996-)
Additional comments	Source for merge of CG7987 anon-WO0118547.245 was sequence comparison (date:051113). (FlyBase, 1996-)
Other Comments
	Area matching Drosophila EST AI135263 (inverted). (Davies, 2001.3.15)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_142118 NM_169587 RefSeq (Proteins) • NP_650375 NP_731922 DDBJ / EMBL / GenBank • AA820538 AAF55074 AAF55075 AAM11309 AI135263 AI455450 AI534941 AW944169 AX094121 AY094956 Entrez Gene - A searchable database of RefSeq genes. • 41768 UniProtKB/TrEMBL • Q8T3L3 Q29R10
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, C2H2 (IPR007087) Zinc finger, C2H2-type/integrase, DNA-binding (IPR013087) Zinc finger, C2H2-like (IPR015880)
Linkouts
	BioGRID - A database of protein and genetic interactions • 66843 DroID - A comprehensive database of gene and protein interactions. • FBgn0038244 DRSC - Results from RNAi screens. • FBgn0038244 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0038244 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG7987-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0038244 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41768 InParanoid A subset of ortholog calls from InParanoid. • AAEL001910-PA Aedes aegypti (mosquito) AGAP008984-PA Anopheles gambiae (mosquito) XP_001945030.1 Acyrthosiphon pisum (pea aphid) BGIBMGA005450-PA Bombyx mori (silk worm) CPIJ010966 Culex pipens (mosquito) ENSCPOP00000004708 Cavia porcellus (guinea pig) DEHA2B03586g Debaryomyces Hansenii (yeast) XP_001603852.1 Nasonia vitripennis (wasp) PHUM000977-PA Pediculus humanus (human body louse) XP_001810857.1 Tribolium castaneum (red flour beetle) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 41768 modMine - Data generated by the modENCODE project. • FBgn0038244 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB18467 PB18466 NV12426 LH20121 FBgn0243460 FBgn0213359 FBgn0210116 FBgn0191883 FBgn0180696 FBgn0176923 FBgn0174517 FBgn0080734 FBgn0161760 FBgn0133421 FBgn0121603 FBgn0113377 FBgn0094490 CPIJ010967 CPIJ010966 BGIBMGA005450 ACYPI56069 ACYPI000462 GB19521 AGAP008984 AAEL001910 PHUM320330 GLEAN_12655
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	anon-WO0118547.245   CG7987 (Keleman et al., 2009.8.5)
Name Synonym
Secondary FlyBase IDs
	FBgn0062149
References ( 16 )
Research paper	Brody et al., 2002, Mech. Dev. 113(1): 41--59 Identification of novel Drosophila neural precursor genes using a differential embryonic head cDNA screen. [FBrf0147137]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] BDGP TI submission, 2007.5.25, MB714.xml MB714.xml [FBrf0200402] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Bellen, 2006.8.3, MBBatch686_2.xml MBBatch686_2.xml [FBrf0191805] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
FlyBase analysis	FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946] FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Patent	Davies et al., 2001, World Patent 0118547: Essential genes and assays relating thereto. [FBrf0199103]
DNA/RNA sequence record	Davies, 2001.3.15, GenBank/EMBL/DDBJ: AX094121 Sequence 245 from Patent WO0118547. [FBrf0149941]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]
Curated genome annotation	Lei, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126680]