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Gene Dmel\CG7655

General Information
Symbol	Dmel\CG7655	Species	D. melanogaster
Name		Annotation symbol	CG7655
Feature type	protein_coding_gene	FlyBase ID	FBgn0038536
Gene Model Status	Current	Stock availability	2 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	90C1-90C1	Sequence location	3R:13,508,393..13,509,476 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG7655 (FBgn0038536). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process: lateral inhibition. 2 alleles are reported. The phenotype of these alleles is annotated with: chaeta. It has one annotated transcript and one annotated polypeptide. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 06-12 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult crop, adult hindgut, larval trachea. Comments on Affy2 ProbeSet: ProbeSet 1639790_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG7655. Gene sequence location is 3R:13508393..13509476.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2012_01	Sequence features BKN28245 HFA16275
FB2011_10
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 90C1-90C1   Limits computationally determined from genome sequence between P{PZ}l(3)0788207882 and P{EP}cpoEP3679
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG7655 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG7655-RA FBtr0083479  NM_142389   1025   253
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG7655-PA   FBpp0082912   28.6   253   9.89     NP_650646   AAF55455
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA391119   AE014297 AAF55455   AI404232   AW940932   AY060774 AAL28322   BI164319   BI228246   BI231017   BI367287   BI633004   BP540684   BP540685   BT003593 AAO39596   CO153787   CO270978   CO323159   CO342601   EC059843   EC086135   EC264579   GH750490   GH754093   GH755237   GH756704   GH757198   GH758558   GH760656   GH771753   GH774726   GH775310   GH786350   GH787888   GH788046   GH789727   GH791038   GH791850   GH791913   GH796683   GH798385   GH799480   GH805122   GH814994   GH816572   GH817355   GH820561   GH825028   GH836523   GH837805   GH837987   GH841301   GH844490   GH849467   GH850597   GH855164   GH856992   GH860380   GH860546   GH862768   GH864133   GH872324   GH873185   GH873440   GH873808   GH874525   GH877182   GH877399   GH880704   GH882365   GH885915   GH887146   GH889741   GH891916   GH897605   GH898684   GH903361   GH904139   GH910317   GH913431   GH914373   GH914717   GH917032   GH920350   GH925576   GH928371   GH930342   GH932500
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VEG9
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0038536    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0038536 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 06-12 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0038536 expression level Developmental Stage   Expression Level embryo 00-02hr    1087 embryo 02-04hr    1427 embryo 04-06hr    3710 embryo 06-08hr    5240 embryo 08-10hr    4489 embryo 10-12hr    4619 embryo 12-14hr    3406 embryo 14-16hr    3048 embryo 16-18hr    2521 embryo 18-20hr    2591 embryo 20-22hr    1792 embryo 22-24hr    2055 larva L1    1803 larva L2    1148 larva L3 12hr old    826 larva L3 puffstage 1-2    850 larva L3 puffstage 3-6    992 larva L3 puffstage 7-9    1248 white prepupae new    1200 white prepupae 12hr    1281 white prepupae 24hr    1594 pupae 2d postWPP    1294 pupae 3d postWPP    1286 pupae 4d postWPP    669 adult male 01day    573 adult male 05day    539 adult male 30day    566 adult female 01day    760 adult female 05day    711 adult female 30day    711 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1087) embryo 02-04hr  (1427) embryo 04-06hr  (3710) embryo 06-08hr  (5240) embryo 08-10hr  (4489) embryo 10-12hr  (4619) embryo 12-14hr  (3406) embryo 14-16hr  (3048) embryo 16-18hr  (2521) embryo 18-20hr  (2591) embryo 20-22hr  (1792) embryo 22-24hr  (2055) larva L1  (1803) larva L2  (1148) larva L3 12hr old  (826) larva L3 puffstage 1-2  (850) larva L3 puffstage 3-6  (992) larva L3 puffstage 7-9  (1248) white prepupae new  (1200) white prepupae 12hr  (1281) white prepupae 24hr  (1594) pupae 2d postWPP  (1294) pupae 3d postWPP  (1286) pupae 4d postWPP  (669) adult male 01day  (573) adult male 05day  (539) adult male 30day  (566) adult female 01day  (760) adult female 05day  (711) adult female 30day  (711) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1087 embryo 02-04hr  1427 embryo 04-06hr  (3710) embryo 06-08hr  (5240) embryo 08-10hr  (4489) embryo 10-12hr  (4619) embryo 12-14hr  (3406) embryo 14-16hr  (3048) embryo 16-18hr  (2521) embryo 18-20hr  (2591) embryo 20-22hr  (1792) embryo 22-24hr  (2055) larva L1  (1803) larva L2    1148 larva L3 12hr old    826 larva L3 puffstage 1-2    850 larva L3 puffstage 3-6    992 larva L3 puffstage 7-9    1248 white prepupae new    1200 white prepupae 12hr    1281 white prepupae 24hr  (1594) pupae 2d postWPP    1294 pupae 3d postWPP    1286 pupae 4d postWPP    669 adult male 01day    573 adult male 05day    539 adult male 30day    566 adult female 01day    760 adult female 05day    711 adult female 30day    711 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1087 embryo 02-04hr    1427 embryo 04-06hr    3710 embryo 06-08hr    5240 embryo 08-10hr    4489 embryo 10-12hr    4619 embryo 12-14hr    3406 embryo 14-16hr    3048 embryo 16-18hr    2521 embryo 18-20hr    2591 embryo 20-22hr    1792 embryo 22-24hr    2055 larva L1    1803 larva L2    1148 larva L3 12hr old    826 larva L3 puffstage 1-2    850 larva L3 puffstage 3-6    992 larva L3 puffstage 7-9    1248 white prepupae new    1200 white prepupae 12hr    1281 white prepupae 24hr    1594 pupae 2d postWPP    1294 pupae 3d postWPP    1286 pupae 4d postWPP    669 adult male 01day    573 adult male 05day    539 adult male 30day    566 adult female 01day    760 adult female 05day    711 adult female 30day    711 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1087 embryo 02-04hr    1427 embryo 04-06hr    3710 embryo 06-08hr    5240 embryo 08-10hr    4489 embryo 10-12hr    4619 embryo 12-14hr    3406 embryo 14-16hr    3048 embryo 16-18hr    2521 embryo 18-20hr    2591 embryo 20-22hr    1792 embryo 22-24hr    2055 larva L1    1803 larva L2    1148 larva L3 12hr old    826 larva L3 puffstage 1-2    850 larva L3 puffstage 3-6    992 larva L3 puffstage 7-9    1248 white prepupae new    1200 white prepupae 12hr    1281 white prepupae 24hr    1594 pupae 2d postWPP    1294 pupae 3d postWPP    1286 pupae 4d postWPP    669 adult male 01day    573 adult male 05day    539 adult male 30day    566 adult female 01day    760 adult female 05day    711 adult female 30day    711 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0038536 expression level Developmental Stage   Expression Level embryo 00-02hr    1087 embryo 02-04hr    1427 embryo 04-06hr    3710 embryo 06-08hr    5240 embryo 08-10hr    4489 embryo 10-12hr    4619 embryo 12-14hr    3406 embryo 14-16hr    3048 embryo 16-18hr    2521 embryo 18-20hr    2591 embryo 20-22hr    1792 embryo 22-24hr    2055 larva L1    1803 larva L2    1148 larva L3 12hr old    826 larva L3 puffstage 1-2    850 larva L3 puffstage 3-6    992 larva L3 puffstage 7-9    1248 white prepupae new    1200 white prepupae 12hr    1281 white prepupae 24hr    1594 pupae 2d postWPP    1294 pupae 3d postWPP    1286 pupae 4d postWPP    669 adult male 01day    573 adult male 05day    539 adult male 30day    566 adult female 01day    760 adult female 05day    711 adult female 30day    711 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1087) embryo 02-04hr  (1427) embryo 04-06hr  (3710) embryo 06-08hr  (5240) embryo 08-10hr  (4489) embryo 10-12hr  (4619) embryo 12-14hr  (3406) embryo 14-16hr  (3048) embryo 16-18hr  (2521) embryo 18-20hr  (2591) embryo 20-22hr  (1792) embryo 22-24hr  (2055) larva L1  (1803) larva L2  (1148) larva L3 12hr old  (826) larva L3 puffstage 1-2  (850) larva L3 puffstage 3-6  (992) larva L3 puffstage 7-9  (1248) white prepupae new  (1200) white prepupae 12hr  (1281) white prepupae 24hr  (1594) pupae 2d postWPP  (1294) pupae 3d postWPP  (1286) pupae 4d postWPP  (669) adult male 01day  (573) adult male 05day  (539) adult male 30day  (566) adult female 01day  (760) adult female 05day  (711) adult female 30day  (711) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1087 embryo 02-04hr  1427 embryo 04-06hr  (3710) embryo 06-08hr  (5240) embryo 08-10hr  (4489) embryo 10-12hr  (4619) embryo 12-14hr  (3406) embryo 14-16hr  (3048) embryo 16-18hr  (2521) embryo 18-20hr  (2591) embryo 20-22hr  1792 embryo 22-24hr  2055 larva L1  1803 larva L2    1148 larva L3 12hr old    826 larva L3 puffstage 1-2    850 larva L3 puffstage 3-6    992 larva L3 puffstage 7-9    1248 white prepupae new    1200 white prepupae 12hr    1281 white prepupae 24hr  1594 pupae 2d postWPP    1294 pupae 3d postWPP    1286 pupae 4d postWPP    669 adult male 01day    573 adult male 05day    539 adult male 30day    566 adult female 01day    760 adult female 05day    711 adult female 30day    711 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1087 embryo 02-04hr    1427 embryo 04-06hr    3710 embryo 06-08hr    5240 embryo 08-10hr    4489 embryo 10-12hr    4619 embryo 12-14hr    3406 embryo 14-16hr    3048 embryo 16-18hr    2521 embryo 18-20hr    2591 embryo 20-22hr    1792 embryo 22-24hr    2055 larva L1    1803 larva L2    1148 larva L3 12hr old    826 larva L3 puffstage 1-2    850 larva L3 puffstage 3-6    992 larva L3 puffstage 7-9    1248 white prepupae new    1200 white prepupae 12hr    1281 white prepupae 24hr    1594 pupae 2d postWPP    1294 pupae 3d postWPP    1286 pupae 4d postWPP    669 adult male 01day    573 adult male 05day    539 adult male 30day    566 adult female 01day    760 adult female 05day    711 adult female 30day    711 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1087 embryo 02-04hr    1427 embryo 04-06hr    3710 embryo 06-08hr    5240 embryo 08-10hr    4489 embryo 10-12hr    4619 embryo 12-14hr    3406 embryo 14-16hr    3048 embryo 16-18hr    2521 embryo 18-20hr    2591 embryo 20-22hr    1792 embryo 22-24hr    2055 larva L1    1803 larva L2    1148 larva L3 12hr old    826 larva L3 puffstage 1-2    850 larva L3 puffstage 3-6    992 larva L3 puffstage 7-9    1248 white prepupae new    1200 white prepupae 12hr    1281 white prepupae 24hr    1594 pupae 2d postWPP    1294 pupae 3d postWPP    1286 pupae 4d postWPP    669 adult male 01day    573 adult male 05day    539 adult male 30day    566 adult female 01day    760 adult female 05day    711 adult female 30day    711 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0038536    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0038536 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult crop, adult hindgut, larval trachea. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0038536 expression level Tissue   Expression Level Larval Central Nervous System    87.825 Larval Midgut    41.3 Larval Hindgut    89.7 Larval Malpighian Tubules    60.9 Larval Fat Body    42.6 Larval Salivary Gland    78.7 Larval Trachea    146.25 Larval Carcass    65.95 Adult Head    47.9 Adult Eye    31.225 Adult Brain    40.8 Adult Thoracic-Abdominal Ganglion    42.7 Adult Crop    150.8 Adult Midgut    49.9 Adult Hindgut    106.9 Adult Malpighian Tubules no informative data Adult Fat Body    45.7 Adult Salivary Gland no informative data Adult Heart    42.7 Adult VirginFemale Spermatheca    33 Adult InseminatedFemale Spermatheca    40.3 Adult Ovary    55.3 Adult Testis    25.1 Adult Male Accessory Gland    54.6 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    87.825 Larval Midgut    41.3 Larval Hindgut    89.7 Larval Malpighian Tubules    60.9 Larval Fat Body    42.6 Larval Salivary Gland    78.7 Larval Trachea    146.25 Larval Carcass    65.95 Adult Head    47.9 Adult Eye    31.225 Adult Brain    40.8 Adult Thoracic-Abdominal Ganglion    42.7 Adult Crop    150.8 Adult Midgut    49.9 Adult Hindgut    106.9 Adult Malpighian Tubules no informative data Adult Fat Body    45.7 Adult Salivary Gland no informative data Adult Heart    42.7 Adult VirginFemale Spermatheca    33 Adult InseminatedFemale Spermatheca    40.3 Adult Ovary    55.3 Adult Testis    25.1 Adult Male Accessory Gland    54.6 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    87.825 Larval Midgut    41.3 Larval Hindgut    89.7 Larval Malpighian Tubules    60.9 Larval Fat Body    42.6 Larval Salivary Gland    78.7 Larval Trachea    146.25 Larval Carcass    65.95 Adult Head    47.9 Adult Eye    31.225 Adult Brain    40.8 Adult Thoracic-Abdominal Ganglion    42.7 Adult Crop    150.8 Adult Midgut    49.9 Adult Hindgut    106.9 Adult Malpighian Tubules no informative data Adult Fat Body    45.7 Adult Salivary Gland no informative data Adult Heart    42.7 Adult VirginFemale Spermatheca    33 Adult InseminatedFemale Spermatheca    40.3 Adult Ovary    55.3 Adult Testis    25.1 Adult Male Accessory Gland    54.6 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    87.825 Larval Midgut    41.3 Larval Hindgut    89.7 Larval Malpighian Tubules    60.9 Larval Fat Body    42.6 Larval Salivary Gland    78.7 Larval Trachea    146.25 Larval Carcass    65.95 Adult Head    47.9 Adult Eye    31.225 Adult Brain    40.8 Adult Thoracic-Abdominal Ganglion    42.7 Adult Crop    150.8 Adult Midgut    49.9 Adult Hindgut    106.9 Adult Malpighian Tubules no informative data Adult Fat Body    45.7 Adult Salivary Gland no informative data Adult Heart    42.7 Adult VirginFemale Spermatheca    33 Adult InseminatedFemale Spermatheca    40.3 Adult Ovary    55.3 Adult Testis    25.1 Adult Male Accessory Gland    54.6 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0038536 expression level Tissue   Expression Level Larval Central Nervous System    87.825 Larval Midgut    41.3 Larval Hindgut    89.7 Larval Malpighian Tubules    60.9 Larval Fat Body    42.6 Larval Salivary Gland    78.7 Larval Trachea    146.25 Larval Carcass    65.95 Adult Head    47.9 Adult Eye    31.225 Adult Brain    40.8 Adult Thoracic-Abdominal Ganglion    42.7 Adult Crop    150.8 Adult Midgut    49.9 Adult Hindgut    106.9 Adult Malpighian Tubules no informative data Adult Fat Body    45.7 Adult Salivary Gland no informative data Adult Heart    42.7 Adult VirginFemale Spermatheca    33 Adult InseminatedFemale Spermatheca    40.3 Adult Ovary    55.3 Adult Testis    25.1 Adult Male Accessory Gland    54.6 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    87.825 Larval Midgut    41.3 Larval Hindgut    89.7 Larval Malpighian Tubules    60.9 Larval Fat Body    42.6 Larval Salivary Gland    78.7 Larval Trachea    146.25 Larval Carcass    65.95 Adult Head    47.9 Adult Eye    31.225 Adult Brain    40.8 Adult Thoracic-Abdominal Ganglion    42.7 Adult Crop    150.8 Adult Midgut    49.9 Adult Hindgut    106.9 Adult Malpighian Tubules no informative data Adult Fat Body    45.7 Adult Salivary Gland no informative data Adult Heart    42.7 Adult VirginFemale Spermatheca    33 Adult InseminatedFemale Spermatheca    40.3 Adult Ovary    55.3 Adult Testis    25.1 Adult Male Accessory Gland    54.6 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    87.825 Larval Midgut    41.3 Larval Hindgut    89.7 Larval Malpighian Tubules    60.9 Larval Fat Body    42.6 Larval Salivary Gland    78.7 Larval Trachea    146.25 Larval Carcass    65.95 Adult Head    47.9 Adult Eye    31.225 Adult Brain    40.8 Adult Thoracic-Abdominal Ganglion    42.7 Adult Crop    150.8 Adult Midgut    49.9 Adult Hindgut    106.9 Adult Malpighian Tubules no informative data Adult Fat Body    45.7 Adult Salivary Gland no informative data Adult Heart    42.7 Adult VirginFemale Spermatheca    33 Adult InseminatedFemale Spermatheca    40.3 Adult Ovary    55.3 Adult Testis    25.1 Adult Male Accessory Gland    54.6 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    87.825 Larval Midgut    41.3 Larval Hindgut    89.7 Larval Malpighian Tubules    60.9 Larval Fat Body    42.6 Larval Salivary Gland    78.7 Larval Trachea    146.25 Larval Carcass    65.95 Adult Head    47.9 Adult Eye    31.225 Adult Brain    40.8 Adult Thoracic-Abdominal Ganglion    42.7 Adult Crop    150.8 Adult Midgut    49.9 Adult Hindgut    106.9 Adult Malpighian Tubules no informative data Adult Fat Body    45.7 Adult Salivary Gland no informative data Adult Heart    42.7 Adult VirginFemale Spermatheca    33 Adult InseminatedFemale Spermatheca    40.3 Adult Ovary    55.3 Adult Testis    25.1 Adult Male Accessory Gland    54.6 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules no informative data Adult Fat Body     Adult Salivary Gland no informative data Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass no informative data FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    47.9   NA  Eye    31.225   NA  Brain    40.8   87.825  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    42.7   NA  Crop    150.8   41.3  Midgut    49.9   89.7  Hindgut    106.9   60.9  Malpighian Tubules    no informative data   42.6  Fat Body    45.7   78.7  Salivary Gland    no informative data   NA  Heart    42.7   146.25  Trachea    NA   NA  VirginFemale Spermatheca    33   NA  InseminatedFemale Spermatheca    40.3   NA  Ovary    55.3   NA  Testis    25.1   NA  Male Accessory Gland    54.6   65.95  Carcass    no informative data modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_11
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0038536 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG13422-RA;CG7655-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG7655 Stages(s) 1-3 Stages(s) 7-8 Stages(s) 9-10 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG7655GD3038 Other Phenotypes Allele visible, with Scer\GAL4pnr-MD237 CG7655GD3038 Phenotype manifest in Allele chaeta, with Scer\GAL4pnr-MD237 CG7655GD3038
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CG7655 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG7655 Class Mutagen Stocks Known lesion CG7655GD3038 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG7655KK108245 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Duplicated in	Dp(3;3)cpo1.36 (Schmidt et al., 2008)
Disrupted in	Df(3R)cpo1.45 (Schmidt et al., 2008) Df(3R)Exel6177 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD3038} NA P{KK108245} NA
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 2 unique terms )
	There is no information supporting a molecular function term for this gene. (Based on a review of available data on: 2007-09-14)
Terms Based on Experimental Evidence ( 1 term )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
lateral inhibition inferred from mutant phenotype (Mummery-Widmer et al., 2009)
Cellular Component ( 0 terms)
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
nuclear envelope inferred from sequence or structural similarity with human NRM (assigned by UniProtKB) (GOA Curators et al., 2007)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG7655 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 67160 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0038536 DroID - A comprehensive database of gene and protein interactions. • FBgn0038536 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42128
Orthologs
Genome-wide drosophilid orthologs	Dana\GF17825 Dere\GG22437 Dgri\GH14928 Dmoj\GI11446 Dper\GL22123 Dpse\GA20505 Dsec\GM15257 Dsim\GD19182 Dvir\GJ13642 Dwil\GK13493 Dyak\GE25492
Curated drosophilid orthologs	Dpse\GA20505
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL009075-PA Aedes aegypti (mosquito) AGAP005818-PA Anopheles gambiae (mosquito) XP_001121274.1 Apis mellifera (honey bee) 257710 Branchiostoma floridae (lancelet) ENSBTAP00000035763 Bos taurus (bovine) ENSCAFP00000000641 Canis familiaris (dog) ENSCINP00000001973 Ciona intestinalis (sea squirt) CPIJ002093 Culex pipens (mosquito) 170344 Chlamidomonas reinhardtii (green alga) ENSCSAVP00000005565 Ciona savignyi (sedentary tunicate) 93306 Capitella spl (polychaete worm) DDB0219303 Dictyostelium discoideum (amoeba) 229408 Daphnia pulex (daphnia) ENSDARP00000087736 Danio rerio (zebra fish) ENSECAP00000007628 Equus caballus (horse) ENSGACP00000003613 Gymnopilus aculeatus (mushroom) ENSP00000259953 Homo sapiens (human) ENSP00000372890 Homo sapiens (human) ENSP00000373065 Homo sapiens (human) ISCW023914-PA Ixodes scapularis (deer tick) ENSMMUP00000022618 Macaca mulatta (rhesus monkey) ENSMUSP00000073873 Mus musculus (house mouse) XP_001604338.1 Nasonia vitripennis (wasp) ENSPPYP00000018355 Pongo pygmaeus (orangutan) ENSPTRP00000030602 Pan troglodytes (chimpanzee) ENSRNOP00000001085 Rattus norvegicus (norway rat) 18248 Trichoplax adhaerens (metazoa) ENSTNIP00000006209 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000006809 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000051984 Xenopus tropicalis (frog) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV13282 LH20214 ISCW023914 FBgn0242559 FBgn0215501 FBgn0200863 FBgn0190687 FBgn0170177 JGI_V11_229408 FBgn0080499 FBgn0159715 FBgn0134207 FBgn0122403 FBgn0114609 FBgn0094843 CPIJ002093 GB16505 AGAP005818 AAEL009075 PB24256
Stocks & Reagents
Stocks Listed in FlyBase ( 2 )
VDRC	v105286 P{KK108245}VIE-260B v12429 w1118; P{GD3038}v12429/TM3
Genomic Clones ( 2 )
	BACR14A01 BACR21K03 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 83 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GH23865 GM24483
Other clones	DPiM_GH23865
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	LD10078 RE03972 RE16695 RE25721 RE53025 SD26939
Other clones	64404 522799 CK01.132D.A8 EK101236 EK189843 EN02822 EP15204 FGA007A08 RP003007735 RP003053188 RP003057912 RP003068871 RP003080853 RP003081039 RP003137010 RP003146343 RP003147693 RP003152964 RP003155816 RP003168831 RP003170946 RP003176969 RP003184352 RP003184720 RP003191278 RP003206380 RP003210708 RP003223378 RP003226893 RP003255881 RP003256891 RP003261219 RP003269351 RP003270217 RP003284623 RP003291426 RP003292612 RP003299510 RP003300039 RP003311034 RP003315118 RP003327286 RP003339730 RP003355023 RP003358297 RP003360069 RP003375099 RP003414817 RP003415603 RP003432584 RP003439439 RP003446125 RP003446197 RP003454406 RP003458352 RP003470053 RP003481562 RP003491970 RP003492806 RP003494535 RP003496161 RP003501145 RP003508564 RP003508727 RP003510863 RP003542324 RP003556570 RP003577487 RP003591399 RP003596616 RP003607528 RP003623588 RP003664307 RP003678250
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0038536 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42128
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
	CG31251- CG31360+ CG31249- Overall orientation not stated: CG14322+ CG7523- ald+ CG18212- CG7655+ (Gilliland et al., 2005)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_142389 RefSeq (Proteins) • NP_650646 DDBJ / EMBL / GenBank • AAF55455 AAL28322 AAO39596 AI404232 AW940932 AY060774 BT003593 Entrez Gene - A searchable database of RefSeq genes. • 42128 UniProtKB/TrEMBL • Q9VEG9
Other Crossreferences
Linkouts
	BioGRID - A database of protein and genetic interactions • 67160 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0038536 DroID - A comprehensive database of gene and protein interactions. • FBgn0038536 DRSC - Results from RNAi screens. • FBgn0038536 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0038536 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG13422-RA;CG7655-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0038536 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42128 InParanoid A subset of ortholog calls from InParanoid. • AAEL009075-PA Aedes aegypti (mosquito) AGAP005818-PA Anopheles gambiae (mosquito) XP_001121274.1 Apis mellifera (honey bee) 257710 Branchiostoma floridae (lancelet) ENSBTAP00000035763 Bos taurus (bovine) ENSCAFP00000000641 Canis familiaris (dog) ENSCINP00000001973 Ciona intestinalis (sea squirt) CPIJ002093 Culex pipens (mosquito) 170344 Chlamidomonas reinhardtii (green alga) ENSCSAVP00000005565 Ciona savignyi (sedentary tunicate) 93306 Capitella spl (polychaete worm) DDB0219303 Dictyostelium discoideum (amoeba) 229408 Daphnia pulex (daphnia) ENSDARP00000087736 Danio rerio (zebra fish) ENSECAP00000007628 Equus caballus (horse) ENSGACP00000003613 Gymnopilus aculeatus (mushroom) ENSP00000259953 Homo sapiens (human) ENSP00000372890 Homo sapiens (human) ENSP00000373065 Homo sapiens (human) ISCW023914-PA Ixodes scapularis (deer tick) ENSMMUP00000022618 Macaca mulatta (rhesus monkey) ENSMUSP00000073873 Mus musculus (house mouse) XP_001604338.1 Nasonia vitripennis (wasp) ENSPPYP00000018355 Pongo pygmaeus (orangutan) ENSPTRP00000030602 Pan troglodytes (chimpanzee) ENSRNOP00000001085 Rattus norvegicus (norway rat) 18248 Trichoplax adhaerens (metazoa) ENSTNIP00000006209 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000006809 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000051984 Xenopus tropicalis (frog) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42128 modMine - Data generated by the modENCODE project. • FBgn0038536 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV13282 LH20214 ISCW023914 FBgn0242559 FBgn0215501 FBgn0200863 FBgn0190687 FBgn0170177 JGI_V11_229408 FBgn0080499 FBgn0159715 FBgn0134207 FBgn0122403 FBgn0114609 FBgn0094843 CPIJ002093 GB16505 AGAP005818 AAEL009075 PB24256
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG7655 (Keleman et al., 2009.8.5)
Name Synonym
Secondary FlyBase IDs
References ( 14 )
Research paper	Schmidt et al., 2008, Proc. Natl. Acad. Sci. U.S.A. 105(42): 16207--16211 An amino acid polymorphism in the couch potato gene forms the basis for climatic adaptation in Drosophila melanogaster. [FBrf0206248] Gilliland et al., 2005, Curr. Biol. 15(7): 672--677 The meiotic defects of mutants in the Drosophila mps1 gene reveal a critical role of Mps1 in the segregation of achiasmate homologs. [FBrf0187308]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase Curators, 2002-, Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. [FBrf0159398] FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Website	GOA Curators et al., 2007, Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity. Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity. [FBrf0212479]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Curated genome annotation	Gelbart, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126667]