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Gene Dmel\CG7357

General Information
Symbol	Dmel\CG7357	Species	D. melanogaster
Name		Annotation symbol	CG7357
Feature type	protein_coding_gene	FlyBase ID	FBgn0038551
Gene Model Status	Current	Stock availability	5 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	90C6-90C6	Sequence location	3R:13,633,129..13,634,944 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG7357 (FBgn0038551). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: DNA binding. The biological processes in which it is involved are not known. 4 alleles are reported. The phenotypes of these alleles are annotated with: trichogen cell; mesothoracic tergum. It has one annotated transcript and one annotated polypeptide. Protein features are: Zinc finger C2H2-type/integrase DNA-binding domain; Zinc finger, AD-type; Zinc finger, C2H2; Zinc finger, C2H2-like. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, larval salivary gland, adult female reproductive system, adult male reproductive system. Comments on Affy2 ProbeSet: ProbeSet 1626568_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG7357. Gene sequence location is 3R:13633129..13634944.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02	Controlled Vocabulary Terms DNA binding
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 90C6-90C6   Limits computationally determined from genome sequence between P{PZ}l(3)0788207882 and P{EP}cpoEP3679
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG7357 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.45
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG7357-RA FBtr0083524  NM_142404   1645   430
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG7357-PA   FBpp0082948   50.5   430   6.43     NP_650661   AAF55474
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, C2H2 (IPR007087) Zinc finger, AD-type (IPR012934) Zinc finger, C2H2-like (IPR015880) Zinc finger C2H2-type/integrase DNA-binding domain (IPR013087)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA201603   AA201715   AA201792   AA246597   AA391697   AA951096   AE014297 AAF55474   AI061699   AI530806   AI532502   AI534201   AW943201   AY051834 AAK93258   BF490043   BI170159   BI241326   BI361609   BI368429   BI369952   BI371431   BI637886   BI641048   CO177360   CO278871   CO305030   CO317999   CZ482982   EC057209   EC075973   EC083944   EC203268   EC207147   EC236813   GH751202   GH751645   GH751675   GH752817   GH756674   GH757298   GH758920   GH770451   GH773498   GH774798   GH778114   GH779530   GH780845   GH782244   GH782441   GH783122   GH783581   GH787776   GH788810   GH791301   GH792186   GH794106   GH795750   GH798207   GH798551   GH802707   GH806928   GH809476   GH810255   GH812759   GH815179   GH815677   GH817934   GH819650   GH820642   GH820915   GH821644   GH826793   GH829359   GH832117   GH832326   GH832542   GH833966   GH838272   GH839187   GH844433   GH853840   GH854000   GH857259   GH857436   GH860227   GH860430   GH860561   GH861162   GH861619   GH865863   GH867624   GH868094   GH871729   GH872335   GH873733   GH875895   GH879230   GH884853   GH888295   GH895024   GH895474   GH899485   GH900088   GH900714   GH901903   GH903605   GH906066   GH907998   GH912814   GH913676   GH915384   GH916134   GH916524   GH920023   GH921844   GH923107   GH924838   GH927031   GH927839   GH931146   GH934092   GH935191
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VEF0
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 4 -- 6   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 7 -- 8   organism | faint & ubiquitous   (Fisher et al., 2012) embryonic stage 9 -- 10   organism | faint & ubiquitous   (Fisher et al., 2012) embryonic stage 11 -- 12   central brain primordium   (Fisher et al., 2012) organism | faint & ubiquitous   (Fisher et al., 2012) ventral nerve cord primordium   (Fisher et al., 2012) embryonic stage 13 -- 16   embryonic brain   (Fisher et al., 2012) embryonic/larval nervous system   (Fisher et al., 2012) ventral nerve cord   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, larval salivary gland, adult female reproductive system, adult male reproductive system. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    250.725 Larval Midgut    65.3 Larval Hindgut    66.1 Larval Malpighian Tubules    71.1 Larval Fat Body    77.9 Larval Salivary Gland    112.2 Larval Trachea    96.1 Larval Carcass    46.425 Adult Head    84.6 Adult Eye    83.45 Adult Brain    135.8 Adult Thoracic-Abdominal Ganglion    117 Adult Crop    84.8 Adult Midgut    99.8 Adult Hindgut    71.2 Adult Malpighian Tubules    61.7 Adult Fat Body    66.6 Adult Salivary Gland    96.2 Adult Heart    62.275 Adult VirginFemale Spermatheca    111.5 Adult InseminatedFemale Spermatheca    113.6 Adult Ovary    338.3 Adult Testis    105.2 Adult Male Accessory Gland    104.4 Adult Carcass    62.9 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    250.725 Larval Midgut    65.3 Larval Hindgut    66.1 Larval Malpighian Tubules    71.1 Larval Fat Body    77.9 Larval Salivary Gland    112.2 Larval Trachea    96.1 Larval Carcass    46.425 Adult Head    84.6 Adult Eye    83.45 Adult Brain    135.8 Adult Thoracic-Abdominal Ganglion    117 Adult Crop    84.8 Adult Midgut    99.8 Adult Hindgut    71.2 Adult Malpighian Tubules    61.7 Adult Fat Body    66.6 Adult Salivary Gland    96.2 Adult Heart    62.275 Adult VirginFemale Spermatheca    111.5 Adult InseminatedFemale Spermatheca    113.6 Adult Ovary    338.3 Adult Testis    105.2 Adult Male Accessory Gland    104.4 Adult Carcass    62.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    250.725 Larval Midgut    65.3 Larval Hindgut    66.1 Larval Malpighian Tubules    71.1 Larval Fat Body    77.9 Larval Salivary Gland    112.2 Larval Trachea    96.1 Larval Carcass    46.425 Adult Head    84.6 Adult Eye    83.45 Adult Brain    135.8 Adult Thoracic-Abdominal Ganglion    117 Adult Crop    84.8 Adult Midgut    99.8 Adult Hindgut    71.2 Adult Malpighian Tubules    61.7 Adult Fat Body    66.6 Adult Salivary Gland    96.2 Adult Heart    62.275 Adult VirginFemale Spermatheca    111.5 Adult InseminatedFemale Spermatheca    113.6 Adult Ovary    338.3 Adult Testis    105.2 Adult Male Accessory Gland    104.4 Adult Carcass    62.9 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    250.725 Larval Midgut    65.3 Larval Hindgut    66.1 Larval Malpighian Tubules    71.1 Larval Fat Body    77.9 Larval Salivary Gland    112.2 Larval Trachea    96.1 Larval Carcass    46.425 Adult Head    84.6 Adult Eye    83.45 Adult Brain    135.8 Adult Thoracic-Abdominal Ganglion    117 Adult Crop    84.8 Adult Midgut    99.8 Adult Hindgut    71.2 Adult Malpighian Tubules    61.7 Adult Fat Body    66.6 Adult Salivary Gland    96.2 Adult Heart    62.275 Adult VirginFemale Spermatheca    111.5 Adult InseminatedFemale Spermatheca    113.6 Adult Ovary    338.3 Adult Testis    105.2 Adult Male Accessory Gland    104.4 Adult Carcass    62.9 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    250.725 Larval Midgut    65.3 Larval Hindgut    66.1 Larval Malpighian Tubules    71.1 Larval Fat Body    77.9 Larval Salivary Gland    112.2 Larval Trachea    96.1 Larval Carcass    46.425 Adult Head    84.6 Adult Eye    83.45 Adult Brain    135.8 Adult Thoracic-Abdominal Ganglion    117 Adult Crop    84.8 Adult Midgut    99.8 Adult Hindgut    71.2 Adult Malpighian Tubules    61.7 Adult Fat Body    66.6 Adult Salivary Gland    96.2 Adult Heart    62.275 Adult VirginFemale Spermatheca    111.5 Adult InseminatedFemale Spermatheca    113.6 Adult Ovary    338.3 Adult Testis    105.2 Adult Male Accessory Gland    104.4 Adult Carcass    62.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    250.725 Larval Midgut    65.3 Larval Hindgut    66.1 Larval Malpighian Tubules    71.1 Larval Fat Body    77.9 Larval Salivary Gland    112.2 Larval Trachea    96.1 Larval Carcass    46.425 Adult Head    84.6 Adult Eye    83.45 Adult Brain    135.8 Adult Thoracic-Abdominal Ganglion    117 Adult Crop    84.8 Adult Midgut    99.8 Adult Hindgut    71.2 Adult Malpighian Tubules    61.7 Adult Fat Body    66.6 Adult Salivary Gland    96.2 Adult Heart    62.275 Adult VirginFemale Spermatheca    111.5 Adult InseminatedFemale Spermatheca    113.6 Adult Ovary    338.3 Adult Testis    105.2 Adult Male Accessory Gland    104.4 Adult Carcass    62.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    250.725 Larval Midgut    65.3 Larval Hindgut    66.1 Larval Malpighian Tubules    71.1 Larval Fat Body    77.9 Larval Salivary Gland    112.2 Larval Trachea    96.1 Larval Carcass    46.425 Adult Head    84.6 Adult Eye    83.45 Adult Brain    135.8 Adult Thoracic-Abdominal Ganglion    117 Adult Crop    84.8 Adult Midgut    99.8 Adult Hindgut    71.2 Adult Malpighian Tubules    61.7 Adult Fat Body    66.6 Adult Salivary Gland    96.2 Adult Heart    62.275 Adult VirginFemale Spermatheca    111.5 Adult InseminatedFemale Spermatheca    113.6 Adult Ovary    338.3 Adult Testis    105.2 Adult Male Accessory Gland    104.4 Adult Carcass    62.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    250.725 Larval Midgut    65.3 Larval Hindgut    66.1 Larval Malpighian Tubules    71.1 Larval Fat Body    77.9 Larval Salivary Gland    112.2 Larval Trachea    96.1 Larval Carcass    46.425 Adult Head    84.6 Adult Eye    83.45 Adult Brain    135.8 Adult Thoracic-Abdominal Ganglion    117 Adult Crop    84.8 Adult Midgut    99.8 Adult Hindgut    71.2 Adult Malpighian Tubules    61.7 Adult Fat Body    66.6 Adult Salivary Gland    96.2 Adult Heart    62.275 Adult VirginFemale Spermatheca    111.5 Adult InseminatedFemale Spermatheca    113.6 Adult Ovary    338.3 Adult Testis    105.2 Adult Male Accessory Gland    104.4 Adult Carcass    62.9 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    84.6   NA  Eye    83.45   NA  Brain    135.8   250.725  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    117   NA  Crop    84.8   65.3  Midgut    99.8   66.1  Hindgut    71.2   71.1  Malpighian Tubules    61.7   77.9  Fat Body    66.6   112.2  Salivary Gland    96.2   NA  Heart    62.275   96.1  Trachea    NA   NA  VirginFemale Spermatheca    111.5   NA  InseminatedFemale Spermatheca    113.6   NA  Ovary    338.3   NA  Testis    105.2   NA  Male Accessory Gland    104.4   46.425  Carcass    62.9 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    32 central nervous system, larvae L3    28 central nervous system, pupae P8    13 head, virgin 1-day female    9 head, virgin 4-day female    9 head, virgin 20-day female    7 head, mated 1-day female    7 head, mated 4-day female    11 head, mated 20-day female    6 head, mated 1-day male    10 head, mated 4-day male    13 head, mated 20-day male    19 salivary gland, larvae L3 wandering    3 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    11 digestive system, 1-day adult    10 digestive system, 4-day adult    14 digestive system, 20-day adult    10 fat body, larvae L3 wandering    4 fat body, white prepupae    10 fat body, pupae P8    26 carcass, larvae L3 wandering    19 carcass, 1-day adult    6 carcass, 4-day adult    10 carcass, 20-day adult    8 ovary, virgin 4-day female    73 ovary, mated 4-day female    80 testis, mated 4-day male    18 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (32) central nervous system, larvae L3  (28) central nervous system, pupae P8    13 head, virgin 1-day female    9 head, virgin 4-day female    9 head, virgin 20-day female    7 head, mated 1-day female    7 head, mated 4-day female    11 head, mated 20-day female    6 head, mated 1-day male    10 head, mated 4-day male    13 head, mated 20-day male    19 salivary gland, larvae L3 wandering    3 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    11 digestive system, 1-day adult    10 digestive system, 4-day adult    14 digestive system, 20-day adult    10 fat body, larvae L3 wandering    4 fat body, white prepupae    10 fat body, pupae P8  26 carcass, larvae L3 wandering    19 carcass, 1-day adult    6 carcass, 4-day adult    10 carcass, 20-day adult    8 ovary, virgin 4-day female  (73) ovary, mated 4-day female  (80) testis, mated 4-day male    18 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    32 central nervous system, larvae L3    28 central nervous system, pupae P8    13 head, virgin 1-day female    9 head, virgin 4-day female    9 head, virgin 20-day female    7 head, mated 1-day female    7 head, mated 4-day female    11 head, mated 20-day female    6 head, mated 1-day male    10 head, mated 4-day male    13 head, mated 20-day male    19 salivary gland, larvae L3 wandering    3 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    11 digestive system, 1-day adult    10 digestive system, 4-day adult    14 digestive system, 20-day adult    10 fat body, larvae L3 wandering    4 fat body, white prepupae    10 fat body, pupae P8    26 carcass, larvae L3 wandering    19 carcass, 1-day adult    6 carcass, 4-day adult    10 carcass, 20-day adult    8 ovary, virgin 4-day female    73 ovary, mated 4-day female    80 testis, mated 4-day male    18 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    32 central nervous system, larvae L3    28 central nervous system, pupae P8    13 head, virgin 1-day female    9 head, virgin 4-day female    9 head, virgin 20-day female    7 head, mated 1-day female    7 head, mated 4-day female    11 head, mated 20-day female    6 head, mated 1-day male    10 head, mated 4-day male    13 head, mated 20-day male    19 salivary gland, larvae L3 wandering    3 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    11 digestive system, 1-day adult    10 digestive system, 4-day adult    14 digestive system, 20-day adult    10 fat body, larvae L3 wandering    4 fat body, white prepupae    10 fat body, pupae P8    26 carcass, larvae L3 wandering    19 carcass, 1-day adult    6 carcass, 4-day adult    10 carcass, 20-day adult    8 ovary, virgin 4-day female    73 ovary, mated 4-day female    80 testis, mated 4-day male    18 accessory gland, mated 4-day male    7 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    32 central nervous system, larvae L3    28 central nervous system, pupae P8    13 head, virgin 1-day female    9 head, virgin 4-day female    9 head, virgin 20-day female    7 head, mated 1-day female    7 head, mated 4-day female    11 head, mated 20-day female    6 head, mated 1-day male    10 head, mated 4-day male    13 head, mated 20-day male    19 salivary gland, larvae L3 wandering    3 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    11 digestive system, 1-day adult    10 digestive system, 4-day adult    14 digestive system, 20-day adult    10 fat body, larvae L3 wandering    4 fat body, white prepupae    10 fat body, pupae P8    26 carcass, larvae L3 wandering    19 carcass, 1-day adult    6 carcass, 4-day adult    10 carcass, 20-day adult    8 ovary, virgin 4-day female    73 ovary, mated 4-day female    80 testis, mated 4-day male    18 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  32 central nervous system, larvae L3  28 central nervous system, pupae P8    13 head, virgin 1-day female    9 head, virgin 4-day female    9 head, virgin 20-day female    7 head, mated 1-day female    7 head, mated 4-day female    11 head, mated 20-day female    6 head, mated 1-day male    10 head, mated 4-day male    13 head, mated 20-day male    19 salivary gland, larvae L3 wandering    3 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    11 digestive system, 1-day adult    10 digestive system, 4-day adult    14 digestive system, 20-day adult    10 fat body, larvae L3 wandering    4 fat body, white prepupae    10 fat body, pupae P8  26 carcass, larvae L3 wandering    19 carcass, 1-day adult    6 carcass, 4-day adult    10 carcass, 20-day adult    8 ovary, virgin 4-day female  (73) ovary, mated 4-day female  (80) testis, mated 4-day male    18 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    32 central nervous system, larvae L3    28 central nervous system, pupae P8    13 head, virgin 1-day female    9 head, virgin 4-day female    9 head, virgin 20-day female    7 head, mated 1-day female    7 head, mated 4-day female    11 head, mated 20-day female    6 head, mated 1-day male    10 head, mated 4-day male    13 head, mated 20-day male    19 salivary gland, larvae L3 wandering    3 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    11 digestive system, 1-day adult    10 digestive system, 4-day adult    14 digestive system, 20-day adult    10 fat body, larvae L3 wandering    4 fat body, white prepupae    10 fat body, pupae P8    26 carcass, larvae L3 wandering    19 carcass, 1-day adult    6 carcass, 4-day adult    10 carcass, 20-day adult    8 ovary, virgin 4-day female    73 ovary, mated 4-day female    80 testis, mated 4-day male    18 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    32 central nervous system, larvae L3    28 central nervous system, pupae P8    13 head, virgin 1-day female    9 head, virgin 4-day female    9 head, virgin 20-day female    7 head, mated 1-day female    7 head, mated 4-day female    11 head, mated 20-day female    6 head, mated 1-day male    10 head, mated 4-day male    13 head, mated 20-day male    19 salivary gland, larvae L3 wandering    3 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    11 digestive system, 1-day adult    10 digestive system, 4-day adult    14 digestive system, 20-day adult    10 fat body, larvae L3 wandering    4 fat body, white prepupae    10 fat body, pupae P8    26 carcass, larvae L3 wandering    19 carcass, 1-day adult    6 carcass, 4-day adult    10 carcass, 20-day adult    8 ovary, virgin 4-day female    73 ovary, mated 4-day female    80 testis, mated 4-day male    18 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    64 embryo 02-04hr    80 embryo 04-06hr    50 embryo 06-08hr    39 embryo 08-10hr    40 embryo 10-12hr    24 embryo 12-14hr    23 embryo 14-16hr    21 embryo 16-18hr    18 embryo 18-20hr    10 embryo 20-22hr    32 embryo 22-24hr    28 larva L1    8 larva L2    7 larva L3 12hr old    6 larva L3 puffstage 1-2    9 larva L3 puffstage 3-6    11 larva L3 puffstage 7-9    13 white prepupae new    12 white prepupae 12hr    17 white prepupae 24hr    18 pupae 2d postWPP    13 pupae 3d postWPP    7 pupae 4d postWPP    6 adult male 01day    9 adult male 05day    12 adult male 30day    11 adult female 01day    14 adult female 05day    31 adult female 30day    32 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (64) embryo 02-04hr  (80) embryo 04-06hr  (50) embryo 06-08hr  (39) embryo 08-10hr  (40) embryo 10-12hr    24 embryo 12-14hr    23 embryo 14-16hr    21 embryo 16-18hr    18 embryo 18-20hr    10 embryo 20-22hr  (32) embryo 22-24hr  (28) larva L1    8 larva L2    7 larva L3 12hr old    6 larva L3 puffstage 1-2    9 larva L3 puffstage 3-6    11 larva L3 puffstage 7-9    13 white prepupae new    12 white prepupae 12hr    17 white prepupae 24hr    18 pupae 2d postWPP    13 pupae 3d postWPP    7 pupae 4d postWPP    6 adult male 01day    9 adult male 05day    12 adult male 30day    11 adult female 01day    14 adult female 05day  (31) adult female 30day  (32) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    64 embryo 02-04hr    80 embryo 04-06hr    50 embryo 06-08hr    39 embryo 08-10hr    40 embryo 10-12hr    24 embryo 12-14hr    23 embryo 14-16hr    21 embryo 16-18hr    18 embryo 18-20hr    10 embryo 20-22hr    32 embryo 22-24hr    28 larva L1    8 larva L2    7 larva L3 12hr old    6 larva L3 puffstage 1-2    9 larva L3 puffstage 3-6    11 larva L3 puffstage 7-9    13 white prepupae new    12 white prepupae 12hr    17 white prepupae 24hr    18 pupae 2d postWPP    13 pupae 3d postWPP    7 pupae 4d postWPP    6 adult male 01day    9 adult male 05day    12 adult male 30day    11 adult female 01day    14 adult female 05day    31 adult female 30day    32 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    64 embryo 02-04hr    80 embryo 04-06hr    50 embryo 06-08hr    39 embryo 08-10hr    40 embryo 10-12hr    24 embryo 12-14hr    23 embryo 14-16hr    21 embryo 16-18hr    18 embryo 18-20hr    10 embryo 20-22hr    32 embryo 22-24hr    28 larva L1    8 larva L2    7 larva L3 12hr old    6 larva L3 puffstage 1-2    9 larva L3 puffstage 3-6    11 larva L3 puffstage 7-9    13 white prepupae new    12 white prepupae 12hr    17 white prepupae 24hr    18 pupae 2d postWPP    13 pupae 3d postWPP    7 pupae 4d postWPP    6 adult male 01day    9 adult male 05day    12 adult male 30day    11 adult female 01day    14 adult female 05day    31 adult female 30day    32 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    64 embryo 02-04hr    80 embryo 04-06hr    50 embryo 06-08hr    39 embryo 08-10hr    40 embryo 10-12hr    24 embryo 12-14hr    23 embryo 14-16hr    21 embryo 16-18hr    18 embryo 18-20hr    10 embryo 20-22hr    32 embryo 22-24hr    28 larva L1    8 larva L2    7 larva L3 12hr old    6 larva L3 puffstage 1-2    9 larva L3 puffstage 3-6    11 larva L3 puffstage 7-9    13 white prepupae new    12 white prepupae 12hr    17 white prepupae 24hr    18 pupae 2d postWPP    13 pupae 3d postWPP    7 pupae 4d postWPP    6 adult male 01day    9 adult male 05day    12 adult male 30day    11 adult female 01day    14 adult female 05day    31 adult female 30day    32 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (64) embryo 02-04hr  (80) embryo 04-06hr  (50) embryo 06-08hr  (39) embryo 08-10hr  (40) embryo 10-12hr    24 embryo 12-14hr    23 embryo 14-16hr    21 embryo 16-18hr    18 embryo 18-20hr    10 embryo 20-22hr  32 embryo 22-24hr  28 larva L1    8 larva L2    7 larva L3 12hr old    6 larva L3 puffstage 1-2    9 larva L3 puffstage 3-6    11 larva L3 puffstage 7-9    13 white prepupae new    12 white prepupae 12hr    17 white prepupae 24hr    18 pupae 2d postWPP    13 pupae 3d postWPP    7 pupae 4d postWPP    6 adult male 01day    9 adult male 05day    12 adult male 30day    11 adult female 01day    14 adult female 05day  31 adult female 30day  32 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    64 embryo 02-04hr    80 embryo 04-06hr    50 embryo 06-08hr    39 embryo 08-10hr    40 embryo 10-12hr    24 embryo 12-14hr    23 embryo 14-16hr    21 embryo 16-18hr    18 embryo 18-20hr    10 embryo 20-22hr    32 embryo 22-24hr    28 larva L1    8 larva L2    7 larva L3 12hr old    6 larva L3 puffstage 1-2    9 larva L3 puffstage 3-6    11 larva L3 puffstage 7-9    13 white prepupae new    12 white prepupae 12hr    17 white prepupae 24hr    18 pupae 2d postWPP    13 pupae 3d postWPP    7 pupae 4d postWPP    6 adult male 01day    9 adult male 05day    12 adult male 30day    11 adult female 01day    14 adult female 05day    31 adult female 30day    32 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    64 embryo 02-04hr    80 embryo 04-06hr    50 embryo 06-08hr    39 embryo 08-10hr    40 embryo 10-12hr    24 embryo 12-14hr    23 embryo 14-16hr    21 embryo 16-18hr    18 embryo 18-20hr    10 embryo 20-22hr    32 embryo 22-24hr    28 larva L1    8 larva L2    7 larva L3 12hr old    6 larva L3 puffstage 1-2    9 larva L3 puffstage 3-6    11 larva L3 puffstage 7-9    13 white prepupae new    12 white prepupae 12hr    17 white prepupae 24hr    18 pupae 2d postWPP    13 pupae 3d postWPP    7 pupae 4d postWPP    6 adult male 01day    9 adult male 05day    12 adult male 30day    11 adult female 01day    14 adult female 05day    31 adult female 30day    32 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    55 Schneider line 2 Sg4    21 embryonic 1182-4H    30 embryonic GM2    31 embryonic Kc167    43 embryonic S1    31 embryonic S3    34 leg disc CME L1    27 wing disc CME-W2    33 wing disc ML-DmD8    28 wing disc ML-DmD9    30 wing disc ML-DmD16-c3    33 wing disc ML-DmD21    18 wing disc ML-DmD32    26 haltere disc ML-DmD17-c3    32 eye-antennal disc ML-DmD11    23 antennal disc ML-DmD20-c5    25 mixed discs ML-DmD4-c1    30 CNS ML-DmBG1-c1    32 CNS ML-DmBG2-c2    36 tumorous blood cells mbn2    32 ovary fGS/OSS    40 ovary OSC    32 ovary OSS    15 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (55) Schneider line 2 Sg4    21 embryonic 1182-4H  (30) embryonic GM2  (31) embryonic Kc167  (43) embryonic S1  (31) embryonic S3  (34) leg disc CME L1  (27) wing disc CME-W2  (33) wing disc ML-DmD8  (28) wing disc ML-DmD9  (30) wing disc ML-DmD16-c3  (33) wing disc ML-DmD21    18 wing disc ML-DmD32  26 haltere disc ML-DmD17-c3  (32) eye-antennal disc ML-DmD11    23 antennal disc ML-DmD20-c5    25 mixed discs ML-DmD4-c1  (30) CNS ML-DmBG1-c1  (32) CNS ML-DmBG2-c2  (36) tumorous blood cells mbn2  (32) ovary fGS/OSS  (40) ovary OSC  (32) ovary OSS    15 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    55 Schneider line 2 Sg4    21 embryonic 1182-4H    30 embryonic GM2    31 embryonic Kc167    43 embryonic S1    31 embryonic S3    34 leg disc CME L1    27 wing disc CME-W2    33 wing disc ML-DmD8    28 wing disc ML-DmD9    30 wing disc ML-DmD16-c3    33 wing disc ML-DmD21    18 wing disc ML-DmD32    26 haltere disc ML-DmD17-c3    32 eye-antennal disc ML-DmD11    23 antennal disc ML-DmD20-c5    25 mixed discs ML-DmD4-c1    30 CNS ML-DmBG1-c1    32 CNS ML-DmBG2-c2    36 tumorous blood cells mbn2    32 ovary fGS/OSS    40 ovary OSC    32 ovary OSS    15 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    55 Schneider line 2 Sg4    21 embryonic 1182-4H    30 embryonic GM2    31 embryonic Kc167    43 embryonic S1    31 embryonic S3    34 leg disc CME L1    27 wing disc CME-W2    33 wing disc ML-DmD8    28 wing disc ML-DmD9    30 wing disc ML-DmD16-c3    33 wing disc ML-DmD21    18 wing disc ML-DmD32    26 haltere disc ML-DmD17-c3    32 eye-antennal disc ML-DmD11    23 antennal disc ML-DmD20-c5    25 mixed discs ML-DmD4-c1    30 CNS ML-DmBG1-c1    32 CNS ML-DmBG2-c2    36 tumorous blood cells mbn2    32 ovary fGS/OSS    40 ovary OSC    32 ovary OSS    15 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    55 Schneider line 2 Sg4    21 embryonic 1182-4H    30 embryonic GM2    31 embryonic Kc167    43 embryonic S1    31 embryonic S3    34 leg disc CME L1    27 wing disc CME-W2    33 wing disc ML-DmD8    28 wing disc ML-DmD9    30 wing disc ML-DmD16-c3    33 wing disc ML-DmD21    18 wing disc ML-DmD32    26 haltere disc ML-DmD17-c3    32 eye-antennal disc ML-DmD11    23 antennal disc ML-DmD20-c5    25 mixed discs ML-DmD4-c1    30 CNS ML-DmBG1-c1    32 CNS ML-DmBG2-c2    36 tumorous blood cells mbn2    32 ovary fGS/OSS    40 ovary OSC    32 ovary OSS    15 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (55) Schneider line 2 Sg4    21 embryonic 1182-4H  30 embryonic GM2  31 embryonic Kc167  (43) embryonic S1  31 embryonic S3  (34) leg disc CME L1  27 wing disc CME-W2  (33) wing disc ML-DmD8  28 wing disc ML-DmD9  30 wing disc ML-DmD16-c3  (33) wing disc ML-DmD21    18 wing disc ML-DmD32  26 haltere disc ML-DmD17-c3  32 eye-antennal disc ML-DmD11    23 antennal disc ML-DmD20-c5    25 mixed discs ML-DmD4-c1  30 CNS ML-DmBG1-c1  32 CNS ML-DmBG2-c2  (36) tumorous blood cells mbn2  32 ovary fGS/OSS  (40) ovary OSC  32 ovary OSS    15 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    55 Schneider line 2 Sg4    21 embryonic 1182-4H    30 embryonic GM2    31 embryonic Kc167    43 embryonic S1    31 embryonic S3    34 leg disc CME L1    27 wing disc CME-W2    33 wing disc ML-DmD8    28 wing disc ML-DmD9    30 wing disc ML-DmD16-c3    33 wing disc ML-DmD21    18 wing disc ML-DmD32    26 haltere disc ML-DmD17-c3    32 eye-antennal disc ML-DmD11    23 antennal disc ML-DmD20-c5    25 mixed discs ML-DmD4-c1    30 CNS ML-DmBG1-c1    32 CNS ML-DmBG2-c2    36 tumorous blood cells mbn2    32 ovary fGS/OSS    40 ovary OSC    32 ovary OSS    15 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    55 Schneider line 2 Sg4    21 embryonic 1182-4H    30 embryonic GM2    31 embryonic Kc167    43 embryonic S1    31 embryonic S3    34 leg disc CME L1    27 wing disc CME-W2    33 wing disc ML-DmD8    28 wing disc ML-DmD9    30 wing disc ML-DmD16-c3    33 wing disc ML-DmD21    18 wing disc ML-DmD32    26 haltere disc ML-DmD17-c3    32 eye-antennal disc ML-DmD11    23 antennal disc ML-DmD20-c5    25 mixed discs ML-DmD4-c1    30 CNS ML-DmBG1-c1    32 CNS ML-DmBG2-c2    36 tumorous blood cells mbn2    32 ovary fGS/OSS    40 ovary OSC    32 ovary OSS    15 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    18 cold shock, 4-day adult    12 heat shock, 4-day adult    25 Cadmium 50 mM 6 hrs, larvae L3    6 Cadmium 50 mM 12 hrs, larvae L3    16 Cadmium 50 mM 48 hrs, 4-day adult    24 Cadmium 100 mM 48 hrs, 4-day adult    53 Copper 0.5 mM 12 hrs, larvae L3    7 Copper 15 mM 48 hrs, 4-day adult    50 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    42 Ethanol 5% 3 hrs, larvae L3    13 Ethanol 10% 3 hrs, larvae L3    8 Caffeine 1.5 mg/ml 4 hrs, larvae L3    12 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    52 Caffeine 25 mg/ml 48 hrs, 4-day adult    23 Paraquat 5 mM 48 hrs, 4-day adult    38 Paraquat 10 mM 48 hrs, 4-day adult    31 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    18 cold shock, 4-day adult    12 heat shock, 4-day adult    25 Cadmium 50 mM 6 hrs, larvae L3    6 Cadmium 50 mM 12 hrs, larvae L3    16 Cadmium 50 mM 48 hrs, 4-day adult    24 Cadmium 100 mM 48 hrs, 4-day adult  (53) Copper 0.5 mM 12 hrs, larvae L3    7 Copper 15 mM 48 hrs, 4-day adult  (50) Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3  (42) Ethanol 5% 3 hrs, larvae L3    13 Ethanol 10% 3 hrs, larvae L3    8 Caffeine 1.5 mg/ml 4 hrs, larvae L3    12 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (52) Caffeine 25 mg/ml 48 hrs, 4-day adult    23 Paraquat 5 mM 48 hrs, 4-day adult  (38) Paraquat 10 mM 48 hrs, 4-day adult  (31) Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    18 cold shock, 4-day adult    12 heat shock, 4-day adult    25 Cadmium 50 mM 6 hrs, larvae L3    6 Cadmium 50 mM 12 hrs, larvae L3    16 Cadmium 50 mM 48 hrs, 4-day adult    24 Cadmium 100 mM 48 hrs, 4-day adult    53 Copper 0.5 mM 12 hrs, larvae L3    7 Copper 15 mM 48 hrs, 4-day adult    50 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    42 Ethanol 5% 3 hrs, larvae L3    13 Ethanol 10% 3 hrs, larvae L3    8 Caffeine 1.5 mg/ml 4 hrs, larvae L3    12 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    52 Caffeine 25 mg/ml 48 hrs, 4-day adult    23 Paraquat 5 mM 48 hrs, 4-day adult    38 Paraquat 10 mM 48 hrs, 4-day adult    31 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    18 cold shock, 4-day adult    12 heat shock, 4-day adult    25 Cadmium 50 mM 6 hrs, larvae L3    6 Cadmium 50 mM 12 hrs, larvae L3    16 Cadmium 50 mM 48 hrs, 4-day adult    24 Cadmium 100 mM 48 hrs, 4-day adult    53 Copper 0.5 mM 12 hrs, larvae L3    7 Copper 15 mM 48 hrs, 4-day adult    50 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    42 Ethanol 5% 3 hrs, larvae L3    13 Ethanol 10% 3 hrs, larvae L3    8 Caffeine 1.5 mg/ml 4 hrs, larvae L3    12 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    52 Caffeine 25 mg/ml 48 hrs, 4-day adult    23 Paraquat 5 mM 48 hrs, 4-day adult    38 Paraquat 10 mM 48 hrs, 4-day adult    31 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    18 cold shock, 4-day adult    12 heat shock, 4-day adult    25 Cadmium 50 mM 6 hrs, larvae L3    6 Cadmium 50 mM 12 hrs, larvae L3    16 Cadmium 50 mM 48 hrs, 4-day adult    24 Cadmium 100 mM 48 hrs, 4-day adult    53 Copper 0.5 mM 12 hrs, larvae L3    7 Copper 15 mM 48 hrs, 4-day adult    50 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    42 Ethanol 5% 3 hrs, larvae L3    13 Ethanol 10% 3 hrs, larvae L3    8 Caffeine 1.5 mg/ml 4 hrs, larvae L3    12 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    52 Caffeine 25 mg/ml 48 hrs, 4-day adult    23 Paraquat 5 mM 48 hrs, 4-day adult    38 Paraquat 10 mM 48 hrs, 4-day adult    31 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    18 cold shock, 4-day adult    12 heat shock, 4-day adult    25 Cadmium 50 mM 6 hrs, larvae L3    6 Cadmium 50 mM 12 hrs, larvae L3    16 Cadmium 50 mM 48 hrs, 4-day adult    24 Cadmium 100 mM 48 hrs, 4-day adult  (53) Copper 0.5 mM 12 hrs, larvae L3    7 Copper 15 mM 48 hrs, 4-day adult  (50) Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3  (42) Ethanol 5% 3 hrs, larvae L3    13 Ethanol 10% 3 hrs, larvae L3    8 Caffeine 1.5 mg/ml 4 hrs, larvae L3    12 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (52) Caffeine 25 mg/ml 48 hrs, 4-day adult    23 Paraquat 5 mM 48 hrs, 4-day adult  (38) Paraquat 10 mM 48 hrs, 4-day adult  31 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    18 cold shock, 4-day adult    12 heat shock, 4-day adult    25 Cadmium 50 mM 6 hrs, larvae L3    6 Cadmium 50 mM 12 hrs, larvae L3    16 Cadmium 50 mM 48 hrs, 4-day adult    24 Cadmium 100 mM 48 hrs, 4-day adult    53 Copper 0.5 mM 12 hrs, larvae L3    7 Copper 15 mM 48 hrs, 4-day adult    50 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    42 Ethanol 5% 3 hrs, larvae L3    13 Ethanol 10% 3 hrs, larvae L3    8 Caffeine 1.5 mg/ml 4 hrs, larvae L3    12 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    52 Caffeine 25 mg/ml 48 hrs, 4-day adult    23 Paraquat 5 mM 48 hrs, 4-day adult    38 Paraquat 10 mM 48 hrs, 4-day adult    31 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    18 cold shock, 4-day adult    12 heat shock, 4-day adult    25 Cadmium 50 mM 6 hrs, larvae L3    6 Cadmium 50 mM 12 hrs, larvae L3    16 Cadmium 50 mM 48 hrs, 4-day adult    24 Cadmium 100 mM 48 hrs, 4-day adult    53 Copper 0.5 mM 12 hrs, larvae L3    7 Copper 15 mM 48 hrs, 4-day adult    50 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    42 Ethanol 5% 3 hrs, larvae L3    13 Ethanol 10% 3 hrs, larvae L3    8 Caffeine 1.5 mg/ml 4 hrs, larvae L3    12 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    52 Caffeine 25 mg/ml 48 hrs, 4-day adult    23 Paraquat 5 mM 48 hrs, 4-day adult    38 Paraquat 10 mM 48 hrs, 4-day adult    31 Rotenone 2 μg 12 hrs, larvae L3    11 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_17 mE1_20_mRNA_expression_cluster_04
External Data & Images
Linkouts	BDGP expression data • LD33778 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0038551 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG7357-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG7357 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 7-8 Stages(s) 9-10 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable CG7357f00521 viable, with Scer\GAL4pnr-MD237 CG7357GD12211 Sterility Allele fertile CG7357f00521 Other Phenotypes Allele visible, with Scer\GAL4pnr-MD237 CG7357GD12211 Phenotype manifest in Allele mesothoracic tergum, with Scer\GAL4pnr-MD237 CG7357GD12211 trichogen cell, with Scer\GAL4pnr-MD237 CG7357GD12211
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of CG7357 Class Mutagen Stocks Known lesion CG7357f00521 piggyBac transposase 2 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG7357 Class Mutagen Stocks Known lesion CG7357GD12211 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG7357KK103636 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG7357NIG.7357R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Partially duplicated in	Dp(3;3)cpo3.20 (Schmidt et al., 2008)
Partially disrupted in	Df(3R)cpo3.42 (Schmidt et al., 2008)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD12211} NA P{KK103636} NA P{NIG.7357R} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions PBac{WH}CG7357f00521 NA
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 1 term )
Molecular Function
CV term Evidence References
DNA binding inferred from direct assay (Krystel and Ayyanathan, 2013)
Biological Process ( 0 terms)
Cellular Component ( 0 terms)
Terms Based on Predictions or Assertions ( 2 terms )
Molecular Function
CV term Evidence References
zinc ion binding inferred from electronic annotation with InterPro:IPR007087, InterPro:IPR012934, InterPro:IPR015880 (FlyBase Curators et al., 2004-)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
nucleus inferred from electronic annotation with InterPro:IPR012934 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
CG7357 - CkIIα anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG7357 - pUf68 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG7357 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 67177 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0038551 DroID - A comprehensive database of gene and protein interactions. • FBgn0038551 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42145
Orthologs
OrthoDB Orthologs (12) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG62NJKT Dipteran inclusive ortholog search No orthologs identified Insect inclusive ortholog search No orthologs identified Arthropod inclusive ortholog search No orthologs identified Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (EOG62NJKT)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG7357     Drosophila simulans   Dsim\GD20207 Y   Drosophila sechellia   Dsec\GM15333 Y   Drosophila erecta   Dere\GG16747 Y   Drosophila yakuba   Dyak\GE25242 Y   Drosophila ananassae   Dana\GF18166 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA20291     Drosophila persimilis   Dper\GL12613     Drosophila willistoni   Dwil\GK13292     Drosophila virilis   Dvir\GJ24679 Y   Drosophila mojavensis   Dmoj\GI22984     Drosophila grimshawi   Dgri\GH22313 Y
Orthologs in non-Drosophila Dipterans (None identified)
No non-Drosophilid orthologies identified
Orthologs in non-Dipteran Insects (None identified)
No non-Dipteran orthologies identified
Orthologs in non-Insect Arthropods (None identified)
No non-Insect Arthropod orthologies identified
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (7) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD20207 Drosophila sechellia Dsec\GM15333 Drosophila erecta Dere\GG16747 Drosophila yakuba Dyak\GE25242 Drosophila ananassae Dana\GF18166 Drosophila virilis Dvir\GJ24679 Drosophila grimshawi Dgri\GH22313
Stocks & Reagents
Stocks Listed in FlyBase ( 5 )
Bloomington	18341 w1118; PBac{WH}CG7357f00521
Harvard	- PBac{WH}CG7357f00521
VDRC	v100097 P{KK103636}VIE-260B v27970 w1118; P{GD12211}v27970 v27971 w1118; P{GD12211}v27971
Genomic Clones ( 2 )
	BACR14A01 BACR45M04 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 118 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD33778
Other clones	DPiM_LD33778
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT26318 LD03719 LD04682 LD04920 LD05468 LD11643 LD31381 RE11527 RE38363 RE45903 RE54395 RE56304 RE58317 SD01529 SD04039 SD06770 SD20023 SD24139
Other clones	15389 97524 102471 124884 CK01.11B.C4 CK01.65B.E10 EK053249 EK131942 EK247111 EK270001 RP003020712 RP003022858 RP003035150 RP003042953 RP003051428 RP003055570 RP003071343 RP003076611 RP003097636 RP003099439 RP003101523 RP003105196 RP003108022 RP003112436 RP003123156 RP003123324 RP003127689 RP003135920 RP003139129 RP003144852 RP003149210 RP003155153 RP003157376 RP003158739 RP003162716 RP003196625 RP003201869 RP003203497 RP003217087 RP003217519 RP003221170 RP003224131 RP003227392 RP003231795 RP003237545 RP003238153 RP003240323 RP003242194 RP003242488 RP003244261 RP003250164 RP003257270 RP003274210 RP003280948 RP003281431 RP003291615 RP003297845 RP003304453 RP003306331 RP003311394 RP003312142 RP003313696 RP003314932 RP003315992 RP003331889 RP003339771 RP003344403 RP003344527 RP003347066 RP003359647 RP003360593 RP003387684 RP003391838 RP003398325 RP003400565 RP003405607 RP003420574 RP003431200 RP003447605 RP003453602 RP003467169 RP003492347 RP003492904 RP003502463 RP003505191 RP003520786 RP003526121 RP003530658 RP003536898 RP003537904 RP003561913 RP003566613 RP003592788 RP003603253 RP003605292 RP003632158 RP003648631 RP003661382
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0038551 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42145
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_142404 RefSeq (Proteins) • NP_650661 DDBJ / EMBL / GenBank • AAF55474 AAK93258 AI061699 AW943201 AY051834 CZ482982 Entrez Gene - A searchable database of RefSeq genes. • 42145 UniProtKB/TrEMBL • Q9VEF0
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, C2H2 (IPR007087) Zinc finger, AD-type (IPR012934) Zinc finger, C2H2-like (IPR015880) Zinc finger C2H2-type/integrase DNA-binding domain (IPR013087) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • LD33778
Linkouts
	BioGRID - A database of protein and genetic interactions • 67177 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0038551 DroID - A comprehensive database of gene and protein interactions. • FBgn0038551 DRSC - Results from RNAi screens. • FBgn0038551 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0038551 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG7357-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0038551 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42145 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42145 modMine - Data generated by the modENCODE project. • FBgn0038551
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG7357 (Keleman et al., 2009.8.5, Krystel and Ayyanathan, 2013, Japanese National Institute of Genetics, 2012.5.21, Felix et al., 2012)
Name Synonym
Secondary FlyBase IDs
References ( 22 )
Generate a list of	All references relating to this gene ( 22 )
List References by type	Research paper  ( 4 ) Supplementary material  ( 4 ) Personal communication to FlyBase  ( 8 ) FlyBase analysis  ( 1 ) Stock list  ( 1 ) Website  ( 1 ) Curated genome annotation  ( 2 )
Recent research papers ( 2 )
	Krystel and Ayyanathan, 2013, Gene 512(2): 373--382 Global analysis of target genes of 21 members of the ZAD transcription factor family in Drosophila melanogaster. [FBrf0220103] Felix et al., 2012, Genetics 191(3): 989--1002 Age-Specific Variation in Immune Response in Drosophila melanogaster Has a Genetic Basis. [FBrf0218944] Show all research papers ...