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Gene Dmel\CG6800

General Information
Symbol	Dmel\CG6800	Species	D. melanogaster
Name		Annotation symbol	CG6800
Feature type	protein_coding_gene	FlyBase ID	FBgn0038902
Gene Model Status	Current	Stock availability	3 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	93F9-93F9	Sequence location	3R:17,601,860..17,602,935 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG6800 (FBgn0038902). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: cyclin-dependent protein kinase activity. Based on sequence similarity, it is predicted to be involved in the biological process: protein phosphorylation. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Protein kinase, ATP binding site; Protein kinase, catalytic domain; Protein kinase-like domain; Serine/threonine-protein kinase, active site; Serine/threonine-protein kinase, catalytic domain; Serine/threonine-protein kinase-like domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very low expression to a trough of extremely low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. Comments on Affy2 ProbeSet: ProbeSet 1624479_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG6800. Gene sequence location is 3R:17601860..17602935.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2012_01	Sequence features BKN51379 BKN26383 HFA16119 BKN51195
FB2011_10
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 93F9-93F9   Limits computationally determined from genome sequence between P{PZ}InR05545 and P{PZ}tsl00617
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG6800 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG6800-RA FBtr0084132  NM_142727   909   302
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG6800-PA   FBpp0083530   34.4   302   8.77     NP_650984   AAF55917
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Protein kinase, catalytic domain (IPR000719) Serine/threonine-protein kinase, catalytic domain (IPR002290) Serine/threonine-protein kinase, active site (IPR008271) Protein kinase-like domain (IPR011009) Protein kinase, ATP binding site (IPR017441) Serine/threonine-protein kinase-like domain (IPR017442)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014297 AAF55917
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VD82
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0038902    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0038902 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very low expression to a trough of extremely low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0038902 expression level Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    34 embryo 04-06hr    62 embryo 06-08hr    71 embryo 08-10hr    49 embryo 10-12hr    75 embryo 12-14hr    72 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr    29 embryo 20-22hr    30 embryo 22-24hr    40 larva L1    61 larva L2    35 larva L3 12hr old    36 larva L3 puffstage 1-2    19 larva L3 puffstage 3-6    23 larva L3 puffstage 7-9    40 white prepupae new    19 white prepupae 12hr    31 white prepupae 24hr    61 pupae 2d postWPP    38 pupae 3d postWPP    45 pupae 4d postWPP    38 adult male 01day    27 adult male 05day    78 adult male 30day    82 adult female 01day    30 adult female 05day    26 adult female 30day    26 Expression Level Scale  None   Extremely low   Very low  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    34 embryo 04-06hr    62 embryo 06-08hr    71 embryo 08-10hr    49 embryo 10-12hr    75 embryo 12-14hr    72 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr    29 embryo 20-22hr    30 embryo 22-24hr    40 larva L1    61 larva L2    35 larva L3 12hr old    36 larva L3 puffstage 1-2    19 larva L3 puffstage 3-6    23 larva L3 puffstage 7-9    40 white prepupae new    19 white prepupae 12hr    31 white prepupae 24hr    61 pupae 2d postWPP    38 pupae 3d postWPP    45 pupae 4d postWPP    38 adult male 01day    27 adult male 05day    78 adult male 30day    82 adult female 01day    30 adult female 05day    26 adult female 30day    26 Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    34 embryo 04-06hr    62 embryo 06-08hr    71 embryo 08-10hr    49 embryo 10-12hr    75 embryo 12-14hr    72 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr    29 embryo 20-22hr    30 embryo 22-24hr    40 larva L1    61 larva L2    35 larva L3 12hr old    36 larva L3 puffstage 1-2    19 larva L3 puffstage 3-6    23 larva L3 puffstage 7-9    40 white prepupae new    19 white prepupae 12hr    31 white prepupae 24hr    61 pupae 2d postWPP    38 pupae 3d postWPP    45 pupae 4d postWPP    38 adult male 01day    27 adult male 05day    78 adult male 30day    82 adult female 01day    30 adult female 05day    26 adult female 30day    26 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    34 embryo 04-06hr    62 embryo 06-08hr    71 embryo 08-10hr    49 embryo 10-12hr    75 embryo 12-14hr    72 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr    29 embryo 20-22hr    30 embryo 22-24hr    40 larva L1    61 larva L2    35 larva L3 12hr old    36 larva L3 puffstage 1-2    19 larva L3 puffstage 3-6    23 larva L3 puffstage 7-9    40 white prepupae new    19 white prepupae 12hr    31 white prepupae 24hr    61 pupae 2d postWPP    38 pupae 3d postWPP    45 pupae 4d postWPP    38 adult male 01day    27 adult male 05day    78 adult male 30day    82 adult female 01day    30 adult female 05day    26 adult female 30day    26 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    34 embryo 04-06hr    62 embryo 06-08hr    71 embryo 08-10hr    49 embryo 10-12hr    75 embryo 12-14hr    72 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr    29 embryo 20-22hr    30 embryo 22-24hr    40 larva L1    61 larva L2    35 larva L3 12hr old    36 larva L3 puffstage 1-2    19 larva L3 puffstage 3-6    23 larva L3 puffstage 7-9    40 white prepupae new    19 white prepupae 12hr    31 white prepupae 24hr    61 pupae 2d postWPP    38 pupae 3d postWPP    45 pupae 4d postWPP    38 adult male 01day    27 adult male 05day    78 adult male 30day    82 adult female 01day    30 adult female 05day    26 adult female 30day    26 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0038902 expression level Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    34 embryo 04-06hr    62 embryo 06-08hr    71 embryo 08-10hr    49 embryo 10-12hr    75 embryo 12-14hr    72 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr    29 embryo 20-22hr    30 embryo 22-24hr    40 larva L1    61 larva L2    35 larva L3 12hr old    36 larva L3 puffstage 1-2    19 larva L3 puffstage 3-6    23 larva L3 puffstage 7-9    40 white prepupae new    19 white prepupae 12hr    31 white prepupae 24hr    61 pupae 2d postWPP    38 pupae 3d postWPP    45 pupae 4d postWPP    38 adult male 01day    27 adult male 05day    78 adult male 30day    82 adult female 01day    30 adult female 05day    26 adult female 30day    26 Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    34 embryo 04-06hr    62 embryo 06-08hr    71 embryo 08-10hr    49 embryo 10-12hr    75 embryo 12-14hr    72 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr    29 embryo 20-22hr    30 embryo 22-24hr    40 larva L1    61 larva L2    35 larva L3 12hr old    36 larva L3 puffstage 1-2    19 larva L3 puffstage 3-6    23 larva L3 puffstage 7-9    40 white prepupae new    19 white prepupae 12hr    31 white prepupae 24hr    61 pupae 2d postWPP    38 pupae 3d postWPP    45 pupae 4d postWPP    38 adult male 01day    27 adult male 05day    78 adult male 30day    82 adult female 01day    30 adult female 05day    26 adult female 30day    26 Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    34 embryo 04-06hr    62 embryo 06-08hr    71 embryo 08-10hr    49 embryo 10-12hr    75 embryo 12-14hr    72 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr    29 embryo 20-22hr    30 embryo 22-24hr    40 larva L1    61 larva L2    35 larva L3 12hr old    36 larva L3 puffstage 1-2    19 larva L3 puffstage 3-6    23 larva L3 puffstage 7-9    40 white prepupae new    19 white prepupae 12hr    31 white prepupae 24hr    61 pupae 2d postWPP    38 pupae 3d postWPP    45 pupae 4d postWPP    38 adult male 01day    27 adult male 05day    78 adult male 30day    82 adult female 01day    30 adult female 05day    26 adult female 30day    26 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    34 embryo 04-06hr    62 embryo 06-08hr    71 embryo 08-10hr    49 embryo 10-12hr    75 embryo 12-14hr    72 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr    29 embryo 20-22hr    30 embryo 22-24hr    40 larva L1    61 larva L2    35 larva L3 12hr old    36 larva L3 puffstage 1-2    19 larva L3 puffstage 3-6    23 larva L3 puffstage 7-9    40 white prepupae new    19 white prepupae 12hr    31 white prepupae 24hr    61 pupae 2d postWPP    38 pupae 3d postWPP    45 pupae 4d postWPP    38 adult male 01day    27 adult male 05day    78 adult male 30day    82 adult female 01day    30 adult female 05day    26 adult female 30day    26 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    34 embryo 04-06hr    62 embryo 06-08hr    71 embryo 08-10hr    49 embryo 10-12hr    75 embryo 12-14hr    72 embryo 14-16hr    20 embryo 16-18hr    22 embryo 18-20hr    29 embryo 20-22hr    30 embryo 22-24hr    40 larva L1    61 larva L2    35 larva L3 12hr old    36 larva L3 puffstage 1-2    19 larva L3 puffstage 3-6    23 larva L3 puffstage 7-9    40 white prepupae new    19 white prepupae 12hr    31 white prepupae 24hr    61 pupae 2d postWPP    38 pupae 3d postWPP    45 pupae 4d postWPP    38 adult male 01day    27 adult male 05day    78 adult male 30day    82 adult female 01day    30 adult female 05day    26 adult female 30day    26 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0038902    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0038902 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0038902 expression level Tissue   Expression Level Larval Central Nervous System    8.925 Larval Midgut    9.4 Larval Hindgut    3.7 Larval Malpighian Tubules    5.1 Larval Fat Body no informative data Larval Salivary Gland    5.6 Larval Trachea    6.575 Larval Carcass    5.225 Adult Head no informative data Adult Eye    2.55 Adult Brain    16.3 Adult Thoracic-Abdominal Ganglion    17.1 Adult Crop    7.3 Adult Midgut no informative data Adult Hindgut    7.9 Adult Malpighian Tubules    6.9 Adult Fat Body    2.9 Adult Salivary Gland    7.9 Adult Heart    1.45 Adult VirginFemale Spermatheca    4.4 Adult InseminatedFemale Spermatheca    7.4 Adult Ovary    3.1 Adult Testis    6.6 Adult Male Accessory Gland    3.1 Adult Carcass    7.3 Expression Level Scale  None   Low  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    8.925 Larval Midgut    9.4 Larval Hindgut    3.7 Larval Malpighian Tubules    5.1 Larval Fat Body no informative data Larval Salivary Gland    5.6 Larval Trachea    6.575 Larval Carcass    5.225 Adult Head no informative data Adult Eye    2.55 Adult Brain    16.3 Adult Thoracic-Abdominal Ganglion    17.1 Adult Crop    7.3 Adult Midgut no informative data Adult Hindgut    7.9 Adult Malpighian Tubules    6.9 Adult Fat Body    2.9 Adult Salivary Gland    7.9 Adult Heart    1.45 Adult VirginFemale Spermatheca    4.4 Adult InseminatedFemale Spermatheca    7.4 Adult Ovary    3.1 Adult Testis    6.6 Adult Male Accessory Gland    3.1 Adult Carcass    7.3 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    8.925 Larval Midgut    9.4 Larval Hindgut    3.7 Larval Malpighian Tubules    5.1 Larval Fat Body no informative data Larval Salivary Gland    5.6 Larval Trachea    6.575 Larval Carcass    5.225 Adult Head no informative data Adult Eye    2.55 Adult Brain    16.3 Adult Thoracic-Abdominal Ganglion    17.1 Adult Crop    7.3 Adult Midgut no informative data Adult Hindgut    7.9 Adult Malpighian Tubules    6.9 Adult Fat Body    2.9 Adult Salivary Gland    7.9 Adult Heart    1.45 Adult VirginFemale Spermatheca    4.4 Adult InseminatedFemale Spermatheca    7.4 Adult Ovary    3.1 Adult Testis    6.6 Adult Male Accessory Gland    3.1 Adult Carcass    7.3 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    8.925 Larval Midgut    9.4 Larval Hindgut    3.7 Larval Malpighian Tubules    5.1 Larval Fat Body no informative data Larval Salivary Gland    5.6 Larval Trachea    6.575 Larval Carcass    5.225 Adult Head no informative data Adult Eye    2.55 Adult Brain    16.3 Adult Thoracic-Abdominal Ganglion    17.1 Adult Crop    7.3 Adult Midgut no informative data Adult Hindgut    7.9 Adult Malpighian Tubules    6.9 Adult Fat Body    2.9 Adult Salivary Gland    7.9 Adult Heart    1.45 Adult VirginFemale Spermatheca    4.4 Adult InseminatedFemale Spermatheca    7.4 Adult Ovary    3.1 Adult Testis    6.6 Adult Male Accessory Gland    3.1 Adult Carcass    7.3 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0038902 expression level Tissue   Expression Level Larval Central Nervous System    8.925 Larval Midgut    9.4 Larval Hindgut    3.7 Larval Malpighian Tubules    5.1 Larval Fat Body no informative data Larval Salivary Gland    5.6 Larval Trachea    6.575 Larval Carcass    5.225 Adult Head no informative data Adult Eye    2.55 Adult Brain    16.3 Adult Thoracic-Abdominal Ganglion    17.1 Adult Crop    7.3 Adult Midgut no informative data Adult Hindgut    7.9 Adult Malpighian Tubules    6.9 Adult Fat Body    2.9 Adult Salivary Gland    7.9 Adult Heart    1.45 Adult VirginFemale Spermatheca    4.4 Adult InseminatedFemale Spermatheca    7.4 Adult Ovary    3.1 Adult Testis    6.6 Adult Male Accessory Gland    3.1 Adult Carcass    7.3 Expression Level Scale  None   Low  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    8.925 Larval Midgut    9.4 Larval Hindgut    3.7 Larval Malpighian Tubules    5.1 Larval Fat Body no informative data Larval Salivary Gland    5.6 Larval Trachea    6.575 Larval Carcass    5.225 Adult Head no informative data Adult Eye    2.55 Adult Brain    16.3 Adult Thoracic-Abdominal Ganglion    17.1 Adult Crop    7.3 Adult Midgut no informative data Adult Hindgut    7.9 Adult Malpighian Tubules    6.9 Adult Fat Body    2.9 Adult Salivary Gland    7.9 Adult Heart    1.45 Adult VirginFemale Spermatheca    4.4 Adult InseminatedFemale Spermatheca    7.4 Adult Ovary    3.1 Adult Testis    6.6 Adult Male Accessory Gland    3.1 Adult Carcass    7.3 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    8.925 Larval Midgut    9.4 Larval Hindgut    3.7 Larval Malpighian Tubules    5.1 Larval Fat Body no informative data Larval Salivary Gland    5.6 Larval Trachea    6.575 Larval Carcass    5.225 Adult Head no informative data Adult Eye    2.55 Adult Brain    16.3 Adult Thoracic-Abdominal Ganglion    17.1 Adult Crop    7.3 Adult Midgut no informative data Adult Hindgut    7.9 Adult Malpighian Tubules    6.9 Adult Fat Body    2.9 Adult Salivary Gland    7.9 Adult Heart    1.45 Adult VirginFemale Spermatheca    4.4 Adult InseminatedFemale Spermatheca    7.4 Adult Ovary    3.1 Adult Testis    6.6 Adult Male Accessory Gland    3.1 Adult Carcass    7.3 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    8.925 Larval Midgut    9.4 Larval Hindgut    3.7 Larval Malpighian Tubules    5.1 Larval Fat Body no informative data Larval Salivary Gland    5.6 Larval Trachea    6.575 Larval Carcass    5.225 Adult Head no informative data Adult Eye    2.55 Adult Brain    16.3 Adult Thoracic-Abdominal Ganglion    17.1 Adult Crop    7.3 Adult Midgut no informative data Adult Hindgut    7.9 Adult Malpighian Tubules    6.9 Adult Fat Body    2.9 Adult Salivary Gland    7.9 Adult Heart    1.45 Adult VirginFemale Spermatheca    4.4 Adult InseminatedFemale Spermatheca    7.4 Adult Ovary    3.1 Adult Testis    6.6 Adult Male Accessory Gland    3.1 Adult Carcass    7.3 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body no informative data Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head no informative data Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut no informative data Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    no informative data   NA  Eye    2.55   NA  Brain    16.3   8.925  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    17.1   NA  Crop    7.3   9.4  Midgut    no informative data   3.7  Hindgut    7.9   5.1  Malpighian Tubules    6.9   no informative data  Fat Body    2.9   5.6  Salivary Gland    7.9   NA  Heart    1.45   6.575  Trachea    NA   NA  VirginFemale Spermatheca    4.4   NA  InseminatedFemale Spermatheca    7.4   NA  Ovary    3.1   NA  Testis    6.6   NA  Male Accessory Gland    3.1   5.225  Carcass    7.3 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_24
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0038902 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6800-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG6800GD12042 Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CG6800 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG6800 Class Mutagen Stocks Known lesion CG6800GD12042 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG6800KK106383 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel6187 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD12042} NA P{KK106383} NA
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 4 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 4 terms )
Molecular Function
CV term Evidence References
ATP binding inferred from electronic annotation with InterPro:IPR000719, InterPro:IPR002290, InterPro:IPR017441 (FlyBase Curators et al., 2004-) cyclin-dependent protein kinase activity inferred from sequence or structural similarity (Liu and Kipreos, 2000) inferred from sequence or structural similarity with mouse Cdk7 (FlyBase, 1992-) protein serine/threonine kinase activity non-traceable author statement (Morrison et al., 2000)
Biological Process
CV term Evidence References
protein phosphorylation inferred from electronic annotation with InterPro:IPR000719, InterPro:IPR002290, InterPro:IPR008271 (FlyBase Curators et al., 2004-) inferred from sequence or structural similarity (Liu and Kipreos, 2000) non-traceable author statement (Morrison et al., 2000)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG6800 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 67527 DroID - A comprehensive database of gene and protein interactions. • FBgn0038902 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42562
Orthologs
Genome-wide drosophilid orthologs	Dana\GF18045 Dere\GG17482 Dgri\GH17105 Dmoj\GI10576 Dper\GL23794 Dpse\GA19870 Dsec\GM26375 Dsim\GD20897 Dvir\GJ22933 Dwil\GK14226 Dyak\GE10241
Curated drosophilid orthologs	Dpse\GA19870
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL010413-PA Aedes aegypti (mosquito) AGAP004594-PA Anopheles gambiae (mosquito) XP_624845.2 Apis mellifera (honey bee) XP_001943042.1 Acyrthosiphon pisum (pea aphid) ENSBTAP00000020188 Bos taurus (bovine) CBP28518 Caenorhabditis briggsae (nematode) CE35567 Caenorhabditis elegans (worm) JA08183 Caenorhabditis japonica (nematode) CPIJ008640 Culex pipens (mosquito) ENSCPOP00000007716 Cavia porcellus (guinea pig) RP16729 Caenorhabditis remanei (nematode) ENSDARP00000006661 Danio rerio (zebra fish) ENSMODP00000012638 Monodelphis domestica (gray opossum) ENSMUSP00000021939 Mus musculus (house mouse) 236269 Nematostella vectensis (starlet anemone) XP_001606120.1 Nasonia vitripennis (wasp) ENSOANP00000017065 Ornithorynchus anatinus (platypus) PHUM000109-PA Pediculus humanus (human body louse) ENSPPYP00000021685 Pongo pygmaeus (orangutan) ENSRNOP00000024466 Rattus norvegicus (norway rat) XP_966910.1 Tribolium castaneum (red flour beetle) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB16858 NV12744 LH17443 FBgn0228115 FBgn0216232 FBgn0210036 FBgn0192357 FBgn0181228 JGI_V11_324412 FBgn0079866 FBgn0161384 FBgn0133340 FBgn0124575 FBgn0109707 FBgn0103344 FBgn0095063 CPIJ008640 ACYPI005548 GB19432 AGAP004594 AAEL010413 PHUM313720 GLEAN_09414
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
VDRC	v104255 P{KK106383}VIE-260B v40394 w1118; P{GD12042}v40394 v40397 w1118; P{GD12042}v40397
Genomic Clones ( 1 )
	BACR42I20 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 0 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0038902 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42562
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG6800 AC014407 (Butler, 2000.11.13)
Additional comments
Other Comments
	dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology. (Kiger et al., 2003)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_142727 RefSeq (Proteins) • NP_650984 DDBJ / EMBL / GenBank • AAF55917 Entrez Gene - A searchable database of RefSeq genes. • 42562 UniProtKB/TrEMBL • Q9VD82
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Protein kinase, catalytic domain (IPR000719) Serine/threonine-protein kinase, catalytic domain (IPR002290) Serine/threonine-protein kinase, active site (IPR008271) Protein kinase-like domain (IPR011009) Protein kinase, ATP binding site (IPR017441) Serine/threonine-protein kinase-like domain (IPR017442)
Linkouts
	BioGRID - A database of protein and genetic interactions • 67527 DroID - A comprehensive database of gene and protein interactions. • FBgn0038902 DRSC - Results from RNAi screens. • FBgn0038902 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0038902 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6800-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0038902 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42562 InParanoid A subset of ortholog calls from InParanoid. • AAEL010413-PA Aedes aegypti (mosquito) AGAP004594-PA Anopheles gambiae (mosquito) XP_624845.2 Apis mellifera (honey bee) XP_001943042.1 Acyrthosiphon pisum (pea aphid) ENSBTAP00000020188 Bos taurus (bovine) CBP28518 Caenorhabditis briggsae (nematode) CE35567 Caenorhabditis elegans (worm) JA08183 Caenorhabditis japonica (nematode) CPIJ008640 Culex pipens (mosquito) ENSCPOP00000007716 Cavia porcellus (guinea pig) RP16729 Caenorhabditis remanei (nematode) ENSDARP00000006661 Danio rerio (zebra fish) ENSMODP00000012638 Monodelphis domestica (gray opossum) ENSMUSP00000021939 Mus musculus (house mouse) 236269 Nematostella vectensis (starlet anemone) XP_001606120.1 Nasonia vitripennis (wasp) ENSOANP00000017065 Ornithorynchus anatinus (platypus) PHUM000109-PA Pediculus humanus (human body louse) ENSPPYP00000021685 Pongo pygmaeus (orangutan) ENSRNOP00000024466 Rattus norvegicus (norway rat) XP_966910.1 Tribolium castaneum (red flour beetle) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42562 modMine - Data generated by the modENCODE project. • FBgn0038902 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB16858 NV12744 LH17443 FBgn0228115 FBgn0216232 FBgn0210036 FBgn0192357 FBgn0181228 JGI_V11_324412 FBgn0079866 FBgn0161384 FBgn0133340 FBgn0124575 FBgn0109707 FBgn0103344 FBgn0095063 CPIJ008640 ACYPI005548 GB19432 AGAP004594 AAEL010413 PHUM313720 GLEAN_09414
Synonyms & Secondary IDs ( 3 )
Reported As
Symbol Synonym	AC014407 (Liu and Kipreos, 2000, ) CG6800 (Keleman et al., 2009.8.5)
Name Synonym	CDK7-like (Morrison et al., 2000)
Secondary FlyBase IDs
	FBgn0043015
References ( 15 )
Research paper	Liu and Kipreos, 2000, Molec. Biol. Evol. 17(7): 1061--1074 Evolution of cyclin-dependent kinases (CDKs) and CDK-activating kinases (CAKs): differential conservation of CAKs in yeast and metazoa. [FBrf0128813]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452] Kiger et al., 2003, J. Biol. 2(4): Additional data file 1: The gene identity and primer sequences for dsRNAs used in the RNAi screens. [FBrf0174231] Morrison et al., 2000, J. Cell Biol. 150(2): Table S1. Drosophila protein kinases and phosphatases. [FBrf0132098]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335] Butler, 2000.11.13, New genes. New genes. [FBrf0132133]
FlyBase analysis	FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]
Curated genome annotation	Zhu, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126704]