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Gene Dmel\PSR

General Information
Symbol	Dmel\PSR	Species	D. melanogaster
Name	phosphatidylserine receptor	Annotation symbol	CG5383
Feature type	protein_coding_gene	FlyBase ID	FBgn0038948
Gene Model Status	Current	Stock availability	4 publicly available
Also Known As	dPSR
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	94A6-94A6	Sequence location	3R:18,186,504..18,188,093 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene phosphatidylserine receptor is referred to in FlyBase by the symbol Dmel\PSR (CG5383, FBgn0038948). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process: negative regulation of apoptotic process; cell competition in a multicellular organism; negative regulation of JNK cascade. 7 alleles are reported. The phenotypes of these alleles are annotated with: eye disc; trichogen cell; male genitalia; wing; ommatidium. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: JmjC domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, adult Malpighian tubules, larval salivary gland, larval trachea, adult ovary, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1640943_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of PSR. Gene sequence location is 3R:18186504..18188093.
User Contributed Data
	Beta version, feedback welcome
External Summaries
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 94A6-94A6   Limits computationally determined from genome sequence between P{lacW}l(3)L3560L3560 and P{PZ}l(3)rQ178rQ178
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\PSR for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.43 gene_with_stop_codon_read_through ; SO:0000697 Stop-codon suppression (UGA) postulated; FBrf0216884. Gene model reviewed during 5.44 Gene model reviewed during 5.49
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) PSR-RA FBtr0084239  NM_142769   1590   408 PSR-RB FBtr0330378  NM_001275903   1590   441
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein PSR-PA   FBpp0083632   47.0   408   9.44     NP_651026   AAF55975 PSR-PB   FBpp0303404   51.0   441   10.09     NP_001262832   AGB96212
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • JmjC domain (IPR003347)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA246248   AA246439   AA264531   AA391007   AA694734   AA696288   AA735370   AA821044   AA940716   AA940950   AA941457   AA941604   AA941818   AA950285   AA951036   AA979250   AE014297 AAF55975   AE014297 AGB96212   AI292881   AI514315   AI518625   AI531999   AI532244   AW942817   AY051727 AAK93151   BF493489   BF493490   BF495672   BG635243   BI215154   BI232624   BI234244   BI242188   BI355678   BI374423   BI622368   BI641261   BP551595   CO265409   CO295838   CO325393   CO327992   EC066447   EC086708   EC212875   EC244639
UniProtKB/Swiss-Prot	Q9VD28
UniProtKB/TrEMBL
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
nucleus inferred from direct assay (Krieser et al., 2007)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, adult Malpighian tubules, larval salivary gland, larval trachea, adult ovary, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    140.025 Larval Midgut    101.2 Larval Hindgut    146.2 Larval Malpighian Tubules    83.4 Larval Fat Body    68.6 Larval Salivary Gland    117.2 Larval Trachea    140.375 Larval Carcass    110 Adult Head    86.5 Adult Eye    77.6 Adult Brain    76.3 Adult Thoracic-Abdominal Ganglion    71.9 Adult Crop    129.4 Adult Midgut    118.2 Adult Hindgut    116.6 Adult Malpighian Tubules    153.5 Adult Fat Body    83.5 Adult Salivary Gland    93.8 Adult Heart    77.225 Adult VirginFemale Spermatheca    61.3 Adult InseminatedFemale Spermatheca    65.7 Adult Ovary    155.9 Adult Testis    63.1 Adult Male Accessory Gland    99.4 Adult Carcass    103.4 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    140.025 Larval Midgut    101.2 Larval Hindgut    146.2 Larval Malpighian Tubules    83.4 Larval Fat Body    68.6 Larval Salivary Gland    117.2 Larval Trachea    140.375 Larval Carcass    110 Adult Head    86.5 Adult Eye    77.6 Adult Brain    76.3 Adult Thoracic-Abdominal Ganglion    71.9 Adult Crop    129.4 Adult Midgut    118.2 Adult Hindgut    116.6 Adult Malpighian Tubules    153.5 Adult Fat Body    83.5 Adult Salivary Gland    93.8 Adult Heart    77.225 Adult VirginFemale Spermatheca    61.3 Adult InseminatedFemale Spermatheca    65.7 Adult Ovary    155.9 Adult Testis    63.1 Adult Male Accessory Gland    99.4 Adult Carcass    103.4 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    140.025 Larval Midgut    101.2 Larval Hindgut    146.2 Larval Malpighian Tubules    83.4 Larval Fat Body    68.6 Larval Salivary Gland    117.2 Larval Trachea    140.375 Larval Carcass    110 Adult Head    86.5 Adult Eye    77.6 Adult Brain    76.3 Adult Thoracic-Abdominal Ganglion    71.9 Adult Crop    129.4 Adult Midgut    118.2 Adult Hindgut    116.6 Adult Malpighian Tubules    153.5 Adult Fat Body    83.5 Adult Salivary Gland    93.8 Adult Heart    77.225 Adult VirginFemale Spermatheca    61.3 Adult InseminatedFemale Spermatheca    65.7 Adult Ovary    155.9 Adult Testis    63.1 Adult Male Accessory Gland    99.4 Adult Carcass    103.4 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    140.025 Larval Midgut    101.2 Larval Hindgut    146.2 Larval Malpighian Tubules    83.4 Larval Fat Body    68.6 Larval Salivary Gland    117.2 Larval Trachea    140.375 Larval Carcass    110 Adult Head    86.5 Adult Eye    77.6 Adult Brain    76.3 Adult Thoracic-Abdominal Ganglion    71.9 Adult Crop    129.4 Adult Midgut    118.2 Adult Hindgut    116.6 Adult Malpighian Tubules    153.5 Adult Fat Body    83.5 Adult Salivary Gland    93.8 Adult Heart    77.225 Adult VirginFemale Spermatheca    61.3 Adult InseminatedFemale Spermatheca    65.7 Adult Ovary    155.9 Adult Testis    63.1 Adult Male Accessory Gland    99.4 Adult Carcass    103.4 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    140.025 Larval Midgut    101.2 Larval Hindgut    146.2 Larval Malpighian Tubules    83.4 Larval Fat Body    68.6 Larval Salivary Gland    117.2 Larval Trachea    140.375 Larval Carcass    110 Adult Head    86.5 Adult Eye    77.6 Adult Brain    76.3 Adult Thoracic-Abdominal Ganglion    71.9 Adult Crop    129.4 Adult Midgut    118.2 Adult Hindgut    116.6 Adult Malpighian Tubules    153.5 Adult Fat Body    83.5 Adult Salivary Gland    93.8 Adult Heart    77.225 Adult VirginFemale Spermatheca    61.3 Adult InseminatedFemale Spermatheca    65.7 Adult Ovary    155.9 Adult Testis    63.1 Adult Male Accessory Gland    99.4 Adult Carcass    103.4 Expression Level Scale  None   Low   Moderate  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    140.025 Larval Midgut    101.2 Larval Hindgut    146.2 Larval Malpighian Tubules    83.4 Larval Fat Body    68.6 Larval Salivary Gland    117.2 Larval Trachea    140.375 Larval Carcass    110 Adult Head    86.5 Adult Eye    77.6 Adult Brain    76.3 Adult Thoracic-Abdominal Ganglion    71.9 Adult Crop    129.4 Adult Midgut    118.2 Adult Hindgut    116.6 Adult Malpighian Tubules    153.5 Adult Fat Body    83.5 Adult Salivary Gland    93.8 Adult Heart    77.225 Adult VirginFemale Spermatheca    61.3 Adult InseminatedFemale Spermatheca    65.7 Adult Ovary    155.9 Adult Testis    63.1 Adult Male Accessory Gland    99.4 Adult Carcass    103.4 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    140.025 Larval Midgut    101.2 Larval Hindgut    146.2 Larval Malpighian Tubules    83.4 Larval Fat Body    68.6 Larval Salivary Gland    117.2 Larval Trachea    140.375 Larval Carcass    110 Adult Head    86.5 Adult Eye    77.6 Adult Brain    76.3 Adult Thoracic-Abdominal Ganglion    71.9 Adult Crop    129.4 Adult Midgut    118.2 Adult Hindgut    116.6 Adult Malpighian Tubules    153.5 Adult Fat Body    83.5 Adult Salivary Gland    93.8 Adult Heart    77.225 Adult VirginFemale Spermatheca    61.3 Adult InseminatedFemale Spermatheca    65.7 Adult Ovary    155.9 Adult Testis    63.1 Adult Male Accessory Gland    99.4 Adult Carcass    103.4 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    140.025 Larval Midgut    101.2 Larval Hindgut    146.2 Larval Malpighian Tubules    83.4 Larval Fat Body    68.6 Larval Salivary Gland    117.2 Larval Trachea    140.375 Larval Carcass    110 Adult Head    86.5 Adult Eye    77.6 Adult Brain    76.3 Adult Thoracic-Abdominal Ganglion    71.9 Adult Crop    129.4 Adult Midgut    118.2 Adult Hindgut    116.6 Adult Malpighian Tubules    153.5 Adult Fat Body    83.5 Adult Salivary Gland    93.8 Adult Heart    77.225 Adult VirginFemale Spermatheca    61.3 Adult InseminatedFemale Spermatheca    65.7 Adult Ovary    155.9 Adult Testis    63.1 Adult Male Accessory Gland    99.4 Adult Carcass    103.4 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    86.5   NA  Eye    77.6   NA  Brain    76.3   140.025  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    71.9   NA  Crop    129.4   101.2  Midgut    118.2   146.2  Hindgut    116.6   83.4  Malpighian Tubules    153.5   68.6  Fat Body    83.5   117.2  Salivary Gland    93.8   NA  Heart    77.225   140.375  Trachea    NA   NA  VirginFemale Spermatheca    61.3   NA  InseminatedFemale Spermatheca    65.7   NA  Ovary    155.9   NA  Testis    63.1   NA  Male Accessory Gland    99.4   110  Carcass    103.4 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    37 central nervous system, larvae L3    23 central nervous system, pupae P8    8 head, virgin 1-day female    6 head, virgin 4-day female    8 head, virgin 20-day female    10 head, mated 1-day female    7 head, mated 4-day female    6 head, mated 20-day female    8 head, mated 1-day male    8 head, mated 4-day male    8 head, mated 20-day male    11 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    12 digestive system, 1-day adult    12 digestive system, 4-day adult    13 digestive system, 20-day adult    17 fat body, larvae L3 wandering    5 fat body, white prepupae    8 fat body, pupae P8    19 carcass, larvae L3 wandering    18 carcass, 1-day adult    8 carcass, 4-day adult    9 carcass, 20-day adult    11 ovary, virgin 4-day female    51 ovary, mated 4-day female    38 testis, mated 4-day male    32 accessory gland, mated 4-day male    10 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (37) central nervous system, larvae L3    23 central nervous system, pupae P8    8 head, virgin 1-day female    6 head, virgin 4-day female    8 head, virgin 20-day female    10 head, mated 1-day female    7 head, mated 4-day female    6 head, mated 20-day female    8 head, mated 1-day male    8 head, mated 4-day male    8 head, mated 20-day male    11 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    12 digestive system, 1-day adult    12 digestive system, 4-day adult    13 digestive system, 20-day adult    17 fat body, larvae L3 wandering    5 fat body, white prepupae    8 fat body, pupae P8    19 carcass, larvae L3 wandering    18 carcass, 1-day adult    8 carcass, 4-day adult    9 carcass, 20-day adult    11 ovary, virgin 4-day female  (51) ovary, mated 4-day female  (38) testis, mated 4-day male  (32) accessory gland, mated 4-day male    10 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    37 central nervous system, larvae L3    23 central nervous system, pupae P8    8 head, virgin 1-day female    6 head, virgin 4-day female    8 head, virgin 20-day female    10 head, mated 1-day female    7 head, mated 4-day female    6 head, mated 20-day female    8 head, mated 1-day male    8 head, mated 4-day male    8 head, mated 20-day male    11 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    12 digestive system, 1-day adult    12 digestive system, 4-day adult    13 digestive system, 20-day adult    17 fat body, larvae L3 wandering    5 fat body, white prepupae    8 fat body, pupae P8    19 carcass, larvae L3 wandering    18 carcass, 1-day adult    8 carcass, 4-day adult    9 carcass, 20-day adult    11 ovary, virgin 4-day female    51 ovary, mated 4-day female    38 testis, mated 4-day male    32 accessory gland, mated 4-day male    10 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    37 central nervous system, larvae L3    23 central nervous system, pupae P8    8 head, virgin 1-day female    6 head, virgin 4-day female    8 head, virgin 20-day female    10 head, mated 1-day female    7 head, mated 4-day female    6 head, mated 20-day female    8 head, mated 1-day male    8 head, mated 4-day male    8 head, mated 20-day male    11 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    12 digestive system, 1-day adult    12 digestive system, 4-day adult    13 digestive system, 20-day adult    17 fat body, larvae L3 wandering    5 fat body, white prepupae    8 fat body, pupae P8    19 carcass, larvae L3 wandering    18 carcass, 1-day adult    8 carcass, 4-day adult    9 carcass, 20-day adult    11 ovary, virgin 4-day female    51 ovary, mated 4-day female    38 testis, mated 4-day male    32 accessory gland, mated 4-day male    10 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    37 central nervous system, larvae L3    23 central nervous system, pupae P8    8 head, virgin 1-day female    6 head, virgin 4-day female    8 head, virgin 20-day female    10 head, mated 1-day female    7 head, mated 4-day female    6 head, mated 20-day female    8 head, mated 1-day male    8 head, mated 4-day male    8 head, mated 20-day male    11 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    12 digestive system, 1-day adult    12 digestive system, 4-day adult    13 digestive system, 20-day adult    17 fat body, larvae L3 wandering    5 fat body, white prepupae    8 fat body, pupae P8    19 carcass, larvae L3 wandering    18 carcass, 1-day adult    8 carcass, 4-day adult    9 carcass, 20-day adult    11 ovary, virgin 4-day female    51 ovary, mated 4-day female    38 testis, mated 4-day male    32 accessory gland, mated 4-day male    10 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (37) central nervous system, larvae L3    23 central nervous system, pupae P8    8 head, virgin 1-day female    6 head, virgin 4-day female    8 head, virgin 20-day female    10 head, mated 1-day female    7 head, mated 4-day female    6 head, mated 20-day female    8 head, mated 1-day male    8 head, mated 4-day male    8 head, mated 20-day male    11 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    12 digestive system, 1-day adult    12 digestive system, 4-day adult    13 digestive system, 20-day adult    17 fat body, larvae L3 wandering    5 fat body, white prepupae    8 fat body, pupae P8    19 carcass, larvae L3 wandering    18 carcass, 1-day adult    8 carcass, 4-day adult    9 carcass, 20-day adult    11 ovary, virgin 4-day female  (51) ovary, mated 4-day female  (38) testis, mated 4-day male  32 accessory gland, mated 4-day male    10 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    37 central nervous system, larvae L3    23 central nervous system, pupae P8    8 head, virgin 1-day female    6 head, virgin 4-day female    8 head, virgin 20-day female    10 head, mated 1-day female    7 head, mated 4-day female    6 head, mated 20-day female    8 head, mated 1-day male    8 head, mated 4-day male    8 head, mated 20-day male    11 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    12 digestive system, 1-day adult    12 digestive system, 4-day adult    13 digestive system, 20-day adult    17 fat body, larvae L3 wandering    5 fat body, white prepupae    8 fat body, pupae P8    19 carcass, larvae L3 wandering    18 carcass, 1-day adult    8 carcass, 4-day adult    9 carcass, 20-day adult    11 ovary, virgin 4-day female    51 ovary, mated 4-day female    38 testis, mated 4-day male    32 accessory gland, mated 4-day male    10 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    37 central nervous system, larvae L3    23 central nervous system, pupae P8    8 head, virgin 1-day female    6 head, virgin 4-day female    8 head, virgin 20-day female    10 head, mated 1-day female    7 head, mated 4-day female    6 head, mated 20-day female    8 head, mated 1-day male    8 head, mated 4-day male    8 head, mated 20-day male    11 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    3 digestive system, larvae L3 wandering    12 digestive system, 1-day adult    12 digestive system, 4-day adult    13 digestive system, 20-day adult    17 fat body, larvae L3 wandering    5 fat body, white prepupae    8 fat body, pupae P8    19 carcass, larvae L3 wandering    18 carcass, 1-day adult    8 carcass, 4-day adult    9 carcass, 20-day adult    11 ovary, virgin 4-day female    51 ovary, mated 4-day female    38 testis, mated 4-day male    32 accessory gland, mated 4-day male    10 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    99 embryo 02-04hr    172 embryo 04-06hr    165 embryo 06-08hr    136 embryo 08-10hr    106 embryo 10-12hr    94 embryo 12-14hr    45 embryo 14-16hr    58 embryo 16-18hr    36 embryo 18-20hr    32 embryo 20-22hr    37 embryo 22-24hr    31 larva L1    37 larva L2    31 larva L3 12hr old    29 larva L3 puffstage 1-2    22 larva L3 puffstage 3-6    25 larva L3 puffstage 7-9    24 white prepupae new    23 white prepupae 12hr    27 white prepupae 24hr    32 pupae 2d postWPP    22 pupae 3d postWPP    14 pupae 4d postWPP    25 adult male 01day    20 adult male 05day    26 adult male 30day    26 adult female 01day    58 adult female 05day    61 adult female 30day    67 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (99) embryo 02-04hr  (172) embryo 04-06hr  (165) embryo 06-08hr  (136) embryo 08-10hr  (106) embryo 10-12hr  (94) embryo 12-14hr  (45) embryo 14-16hr  (58) embryo 16-18hr  (36) embryo 18-20hr  (32) embryo 20-22hr  (37) embryo 22-24hr  (31) larva L1  (37) larva L2  (31) larva L3 12hr old  (29) larva L3 puffstage 1-2    22 larva L3 puffstage 3-6    25 larva L3 puffstage 7-9    24 white prepupae new    23 white prepupae 12hr  (27) white prepupae 24hr  (32) pupae 2d postWPP    22 pupae 3d postWPP    14 pupae 4d postWPP    25 adult male 01day    20 adult male 05day  26 adult male 30day  26 adult female 01day  (58) adult female 05day  (61) adult female 30day  (67) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    99 embryo 02-04hr  (172) embryo 04-06hr  (165) embryo 06-08hr  (136) embryo 08-10hr  106 embryo 10-12hr    94 embryo 12-14hr    45 embryo 14-16hr    58 embryo 16-18hr    36 embryo 18-20hr    32 embryo 20-22hr    37 embryo 22-24hr    31 larva L1    37 larva L2    31 larva L3 12hr old    29 larva L3 puffstage 1-2    22 larva L3 puffstage 3-6    25 larva L3 puffstage 7-9    24 white prepupae new    23 white prepupae 12hr    27 white prepupae 24hr    32 pupae 2d postWPP    22 pupae 3d postWPP    14 pupae 4d postWPP    25 adult male 01day    20 adult male 05day    26 adult male 30day    26 adult female 01day    58 adult female 05day    61 adult female 30day    67 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    99 embryo 02-04hr    172 embryo 04-06hr    165 embryo 06-08hr    136 embryo 08-10hr    106 embryo 10-12hr    94 embryo 12-14hr    45 embryo 14-16hr    58 embryo 16-18hr    36 embryo 18-20hr    32 embryo 20-22hr    37 embryo 22-24hr    31 larva L1    37 larva L2    31 larva L3 12hr old    29 larva L3 puffstage 1-2    22 larva L3 puffstage 3-6    25 larva L3 puffstage 7-9    24 white prepupae new    23 white prepupae 12hr    27 white prepupae 24hr    32 pupae 2d postWPP    22 pupae 3d postWPP    14 pupae 4d postWPP    25 adult male 01day    20 adult male 05day    26 adult male 30day    26 adult female 01day    58 adult female 05day    61 adult female 30day    67 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    99 embryo 02-04hr    172 embryo 04-06hr    165 embryo 06-08hr    136 embryo 08-10hr    106 embryo 10-12hr    94 embryo 12-14hr    45 embryo 14-16hr    58 embryo 16-18hr    36 embryo 18-20hr    32 embryo 20-22hr    37 embryo 22-24hr    31 larva L1    37 larva L2    31 larva L3 12hr old    29 larva L3 puffstage 1-2    22 larva L3 puffstage 3-6    25 larva L3 puffstage 7-9    24 white prepupae new    23 white prepupae 12hr    27 white prepupae 24hr    32 pupae 2d postWPP    22 pupae 3d postWPP    14 pupae 4d postWPP    25 adult male 01day    20 adult male 05day    26 adult male 30day    26 adult female 01day    58 adult female 05day    61 adult female 30day    67 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (99) embryo 02-04hr  (172) embryo 04-06hr  (165) embryo 06-08hr  (136) embryo 08-10hr  (106) embryo 10-12hr  (94) embryo 12-14hr  (45) embryo 14-16hr  (58) embryo 16-18hr  (36) embryo 18-20hr  32 embryo 20-22hr  (37) embryo 22-24hr  31 larva L1  (37) larva L2  31 larva L3 12hr old  29 larva L3 puffstage 1-2    22 larva L3 puffstage 3-6    25 larva L3 puffstage 7-9    24 white prepupae new    23 white prepupae 12hr  27 white prepupae 24hr  32 pupae 2d postWPP    22 pupae 3d postWPP    14 pupae 4d postWPP    25 adult male 01day    20 adult male 05day  26 adult male 30day  26 adult female 01day  (58) adult female 05day  (61) adult female 30day  (67) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    99 embryo 02-04hr  (172) embryo 04-06hr  (165) embryo 06-08hr  136 embryo 08-10hr  106 embryo 10-12hr    94 embryo 12-14hr    45 embryo 14-16hr    58 embryo 16-18hr    36 embryo 18-20hr    32 embryo 20-22hr    37 embryo 22-24hr    31 larva L1    37 larva L2    31 larva L3 12hr old    29 larva L3 puffstage 1-2    22 larva L3 puffstage 3-6    25 larva L3 puffstage 7-9    24 white prepupae new    23 white prepupae 12hr    27 white prepupae 24hr    32 pupae 2d postWPP    22 pupae 3d postWPP    14 pupae 4d postWPP    25 adult male 01day    20 adult male 05day    26 adult male 30day    26 adult female 01day    58 adult female 05day    61 adult female 30day    67 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    99 embryo 02-04hr    172 embryo 04-06hr    165 embryo 06-08hr    136 embryo 08-10hr    106 embryo 10-12hr    94 embryo 12-14hr    45 embryo 14-16hr    58 embryo 16-18hr    36 embryo 18-20hr    32 embryo 20-22hr    37 embryo 22-24hr    31 larva L1    37 larva L2    31 larva L3 12hr old    29 larva L3 puffstage 1-2    22 larva L3 puffstage 3-6    25 larva L3 puffstage 7-9    24 white prepupae new    23 white prepupae 12hr    27 white prepupae 24hr    32 pupae 2d postWPP    22 pupae 3d postWPP    14 pupae 4d postWPP    25 adult male 01day    20 adult male 05day    26 adult male 30day    26 adult female 01day    58 adult female 05day    61 adult female 30day    67 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    97 Schneider line 2 Sg4    59 embryonic 1182-4H    36 embryonic GM2    46 embryonic Kc167    79 embryonic S1    77 embryonic S3    42 leg disc CME L1    45 wing disc CME-W2    49 wing disc ML-DmD8    31 wing disc ML-DmD9    50 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    75 wing disc ML-DmD32    55 haltere disc ML-DmD17-c3    45 eye-antennal disc ML-DmD11    62 antennal disc ML-DmD20-c5    91 mixed discs ML-DmD4-c1    27 CNS ML-DmBG1-c1    43 CNS ML-DmBG2-c2    29 tumorous blood cells mbn2    32 ovary fGS/OSS    32 ovary OSC    25 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (97) Schneider line 2 Sg4  (59) embryonic 1182-4H  (36) embryonic GM2  (46) embryonic Kc167  (79) embryonic S1  (77) embryonic S3  (42) leg disc CME L1  (45) wing disc CME-W2  (49) wing disc ML-DmD8  (31) wing disc ML-DmD9  (50) wing disc ML-DmD16-c3  (39) wing disc ML-DmD21  (75) wing disc ML-DmD32  (55) haltere disc ML-DmD17-c3  (45) eye-antennal disc ML-DmD11  (62) antennal disc ML-DmD20-c5  (91) mixed discs ML-DmD4-c1  (27) CNS ML-DmBG1-c1  (43) CNS ML-DmBG2-c2  (29) tumorous blood cells mbn2  (32) ovary fGS/OSS  (32) ovary OSC    25 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    97 Schneider line 2 Sg4    59 embryonic 1182-4H    36 embryonic GM2    46 embryonic Kc167    79 embryonic S1    77 embryonic S3    42 leg disc CME L1    45 wing disc CME-W2    49 wing disc ML-DmD8    31 wing disc ML-DmD9    50 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    75 wing disc ML-DmD32    55 haltere disc ML-DmD17-c3    45 eye-antennal disc ML-DmD11    62 antennal disc ML-DmD20-c5    91 mixed discs ML-DmD4-c1    27 CNS ML-DmBG1-c1    43 CNS ML-DmBG2-c2    29 tumorous blood cells mbn2    32 ovary fGS/OSS    32 ovary OSC    25 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    97 Schneider line 2 Sg4    59 embryonic 1182-4H    36 embryonic GM2    46 embryonic Kc167    79 embryonic S1    77 embryonic S3    42 leg disc CME L1    45 wing disc CME-W2    49 wing disc ML-DmD8    31 wing disc ML-DmD9    50 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    75 wing disc ML-DmD32    55 haltere disc ML-DmD17-c3    45 eye-antennal disc ML-DmD11    62 antennal disc ML-DmD20-c5    91 mixed discs ML-DmD4-c1    27 CNS ML-DmBG1-c1    43 CNS ML-DmBG2-c2    29 tumorous blood cells mbn2    32 ovary fGS/OSS    32 ovary OSC    25 ovary OSS    8 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    97 Schneider line 2 Sg4    59 embryonic 1182-4H    36 embryonic GM2    46 embryonic Kc167    79 embryonic S1    77 embryonic S3    42 leg disc CME L1    45 wing disc CME-W2    49 wing disc ML-DmD8    31 wing disc ML-DmD9    50 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    75 wing disc ML-DmD32    55 haltere disc ML-DmD17-c3    45 eye-antennal disc ML-DmD11    62 antennal disc ML-DmD20-c5    91 mixed discs ML-DmD4-c1    27 CNS ML-DmBG1-c1    43 CNS ML-DmBG2-c2    29 tumorous blood cells mbn2    32 ovary fGS/OSS    32 ovary OSC    25 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (97) Schneider line 2 Sg4  (59) embryonic 1182-4H  (36) embryonic GM2  (46) embryonic Kc167  (79) embryonic S1  (77) embryonic S3  (42) leg disc CME L1  (45) wing disc CME-W2  (49) wing disc ML-DmD8  31 wing disc ML-DmD9  (50) wing disc ML-DmD16-c3  (39) wing disc ML-DmD21  (75) wing disc ML-DmD32  (55) haltere disc ML-DmD17-c3  (45) eye-antennal disc ML-DmD11  (62) antennal disc ML-DmD20-c5  (91) mixed discs ML-DmD4-c1  27 CNS ML-DmBG1-c1  (43) CNS ML-DmBG2-c2  29 tumorous blood cells mbn2  32 ovary fGS/OSS  32 ovary OSC    25 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    97 Schneider line 2 Sg4    59 embryonic 1182-4H    36 embryonic GM2    46 embryonic Kc167    79 embryonic S1    77 embryonic S3    42 leg disc CME L1    45 wing disc CME-W2    49 wing disc ML-DmD8    31 wing disc ML-DmD9    50 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    75 wing disc ML-DmD32    55 haltere disc ML-DmD17-c3    45 eye-antennal disc ML-DmD11    62 antennal disc ML-DmD20-c5    91 mixed discs ML-DmD4-c1    27 CNS ML-DmBG1-c1    43 CNS ML-DmBG2-c2    29 tumorous blood cells mbn2    32 ovary fGS/OSS    32 ovary OSC    25 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    97 Schneider line 2 Sg4    59 embryonic 1182-4H    36 embryonic GM2    46 embryonic Kc167    79 embryonic S1    77 embryonic S3    42 leg disc CME L1    45 wing disc CME-W2    49 wing disc ML-DmD8    31 wing disc ML-DmD9    50 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    75 wing disc ML-DmD32    55 haltere disc ML-DmD17-c3    45 eye-antennal disc ML-DmD11    62 antennal disc ML-DmD20-c5    91 mixed discs ML-DmD4-c1    27 CNS ML-DmBG1-c1    43 CNS ML-DmBG2-c2    29 tumorous blood cells mbn2    32 ovary fGS/OSS    32 ovary OSC    25 ovary OSS    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    17 cold shock, 4-day adult    12 heat shock, 4-day adult    23 Cadmium 50 mM 6 hrs, larvae L3    19 Cadmium 50 mM 12 hrs, larvae L3    9 Cadmium 50 mM 48 hrs, 4-day adult    20 Cadmium 100 mM 48 hrs, 4-day adult    28 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    21 Zinc 5 mM 12 hrs, larvae L3    13 Zinc 4.5 mM 48 hrs, 4-day adult    9 Ethanol 2.5% 3 hrs, larvae L3    41 Ethanol 5% 3 hrs, larvae L3    15 Ethanol 10% 3 hrs, larvae L3    17 Caffeine 1.5 mg/ml 4 hrs, larvae L3    16 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    28 Paraquat 10 mM 48 hrs, 4-day adult    36 Rotenone 2 μg 12 hrs, larvae L3    18 Rotenone 8 μg 12 hrs, larvae L3    22 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    17 cold shock, 4-day adult    12 heat shock, 4-day adult    23 Cadmium 50 mM 6 hrs, larvae L3    19 Cadmium 50 mM 12 hrs, larvae L3    9 Cadmium 50 mM 48 hrs, 4-day adult    20 Cadmium 100 mM 48 hrs, 4-day adult  (28) Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    21 Zinc 5 mM 12 hrs, larvae L3    13 Zinc 4.5 mM 48 hrs, 4-day adult    9 Ethanol 2.5% 3 hrs, larvae L3  (41) Ethanol 5% 3 hrs, larvae L3    15 Ethanol 10% 3 hrs, larvae L3    17 Caffeine 1.5 mg/ml 4 hrs, larvae L3    16 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (28) Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult  (28) Paraquat 10 mM 48 hrs, 4-day adult  (36) Rotenone 2 μg 12 hrs, larvae L3    18 Rotenone 8 μg 12 hrs, larvae L3    22 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    17 cold shock, 4-day adult    12 heat shock, 4-day adult    23 Cadmium 50 mM 6 hrs, larvae L3    19 Cadmium 50 mM 12 hrs, larvae L3    9 Cadmium 50 mM 48 hrs, 4-day adult    20 Cadmium 100 mM 48 hrs, 4-day adult    28 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    21 Zinc 5 mM 12 hrs, larvae L3    13 Zinc 4.5 mM 48 hrs, 4-day adult    9 Ethanol 2.5% 3 hrs, larvae L3    41 Ethanol 5% 3 hrs, larvae L3    15 Ethanol 10% 3 hrs, larvae L3    17 Caffeine 1.5 mg/ml 4 hrs, larvae L3    16 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    28 Paraquat 10 mM 48 hrs, 4-day adult    36 Rotenone 2 μg 12 hrs, larvae L3    18 Rotenone 8 μg 12 hrs, larvae L3    22 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    17 cold shock, 4-day adult    12 heat shock, 4-day adult    23 Cadmium 50 mM 6 hrs, larvae L3    19 Cadmium 50 mM 12 hrs, larvae L3    9 Cadmium 50 mM 48 hrs, 4-day adult    20 Cadmium 100 mM 48 hrs, 4-day adult    28 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    21 Zinc 5 mM 12 hrs, larvae L3    13 Zinc 4.5 mM 48 hrs, 4-day adult    9 Ethanol 2.5% 3 hrs, larvae L3    41 Ethanol 5% 3 hrs, larvae L3    15 Ethanol 10% 3 hrs, larvae L3    17 Caffeine 1.5 mg/ml 4 hrs, larvae L3    16 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    28 Paraquat 10 mM 48 hrs, 4-day adult    36 Rotenone 2 μg 12 hrs, larvae L3    18 Rotenone 8 μg 12 hrs, larvae L3    22 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    17 cold shock, 4-day adult    12 heat shock, 4-day adult    23 Cadmium 50 mM 6 hrs, larvae L3    19 Cadmium 50 mM 12 hrs, larvae L3    9 Cadmium 50 mM 48 hrs, 4-day adult    20 Cadmium 100 mM 48 hrs, 4-day adult    28 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    21 Zinc 5 mM 12 hrs, larvae L3    13 Zinc 4.5 mM 48 hrs, 4-day adult    9 Ethanol 2.5% 3 hrs, larvae L3    41 Ethanol 5% 3 hrs, larvae L3    15 Ethanol 10% 3 hrs, larvae L3    17 Caffeine 1.5 mg/ml 4 hrs, larvae L3    16 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    28 Paraquat 10 mM 48 hrs, 4-day adult    36 Rotenone 2 μg 12 hrs, larvae L3    18 Rotenone 8 μg 12 hrs, larvae L3    22 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    17 cold shock, 4-day adult    12 heat shock, 4-day adult    23 Cadmium 50 mM 6 hrs, larvae L3    19 Cadmium 50 mM 12 hrs, larvae L3    9 Cadmium 50 mM 48 hrs, 4-day adult    20 Cadmium 100 mM 48 hrs, 4-day adult  28 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    21 Zinc 5 mM 12 hrs, larvae L3    13 Zinc 4.5 mM 48 hrs, 4-day adult    9 Ethanol 2.5% 3 hrs, larvae L3  (41) Ethanol 5% 3 hrs, larvae L3    15 Ethanol 10% 3 hrs, larvae L3    17 Caffeine 1.5 mg/ml 4 hrs, larvae L3    16 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  28 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult  28 Paraquat 10 mM 48 hrs, 4-day adult  (36) Rotenone 2 μg 12 hrs, larvae L3    18 Rotenone 8 μg 12 hrs, larvae L3    22 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    17 cold shock, 4-day adult    12 heat shock, 4-day adult    23 Cadmium 50 mM 6 hrs, larvae L3    19 Cadmium 50 mM 12 hrs, larvae L3    9 Cadmium 50 mM 48 hrs, 4-day adult    20 Cadmium 100 mM 48 hrs, 4-day adult    28 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    21 Zinc 5 mM 12 hrs, larvae L3    13 Zinc 4.5 mM 48 hrs, 4-day adult    9 Ethanol 2.5% 3 hrs, larvae L3    41 Ethanol 5% 3 hrs, larvae L3    15 Ethanol 10% 3 hrs, larvae L3    17 Caffeine 1.5 mg/ml 4 hrs, larvae L3    16 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    28 Paraquat 10 mM 48 hrs, 4-day adult    36 Rotenone 2 μg 12 hrs, larvae L3    18 Rotenone 8 μg 12 hrs, larvae L3    22 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    17 cold shock, 4-day adult    12 heat shock, 4-day adult    23 Cadmium 50 mM 6 hrs, larvae L3    19 Cadmium 50 mM 12 hrs, larvae L3    9 Cadmium 50 mM 48 hrs, 4-day adult    20 Cadmium 100 mM 48 hrs, 4-day adult    28 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    21 Zinc 5 mM 12 hrs, larvae L3    13 Zinc 4.5 mM 48 hrs, 4-day adult    9 Ethanol 2.5% 3 hrs, larvae L3    41 Ethanol 5% 3 hrs, larvae L3    15 Ethanol 10% 3 hrs, larvae L3    17 Caffeine 1.5 mg/ml 4 hrs, larvae L3    16 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    28 Paraquat 10 mM 48 hrs, 4-day adult    36 Rotenone 2 μg 12 hrs, larvae L3    18 Rotenone 8 μg 12 hrs, larvae L3    22 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_08 mE1_20_mRNA_expression_cluster_03
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0038948 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG5383-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable PSRFM1 viable, with Scer\GAL4pnr-MD237 PSRGD11631 Sterility Allele fertile PSRFM1 Other Phenotypes Allele visible, with Scer\GAL4ap-md544 PSRScer\UAS.cKa visible, with Scer\GAL4pnr-MD237 PSRGD11631 visible | male, with Scer\GAL4Act5C.PU PSRScer\UAS.cKa visible | male, with Scer\GAL4tub.PU PSRScer\UAS.cKa Phenotype manifest in Allele eye disc, with Scer\GAL4GMR.PF PSRScer\UAS.cKa male genitalia, with Scer\GAL4Act5C.PU PSRScer\UAS.cKa male genitalia, with Scer\GAL4tub.PU PSRScer\UAS.cKa ommatidium PSRFM1 trichogen cell, with Scer\GAL4pnr-MD237 PSRGD11631 wing, with Scer\GAL4ap-md544 PSRScer\UAS.cKa
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of PSR Class Mutagen Stocks Known lesion PSREY07193 1 -- PSRFM1 Delta2-3 0 Yes PSRnull 0 --
Alleles Carried on Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show
Allele of PSR Class Mutagen Stocks Known lesion PSRGD11631 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes PSRHMS00576 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes PSRNIG.5383R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes PSRScer\UAS.cKa in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel6190 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD11631} NA P{NIG.5383R} NA P{TRiP.HMS00576} NA P{UAS-PSR.K} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EP}EP561 NA P{EPgy2}PSREY07193 NA miscellaneous insertions P{?EP}PSRFM1 NA
Gene Ontology: Function, Process & Cellular Component ( 4 unique terms )
	There is no information supporting a molecular function term for this gene. (Based on a review of available data before: 2006)
Terms Based on Experimental Evidence ( 4 terms )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
cell competition in a multicellular organism inferred from mutant phenotype (Li and Baker, 2007) negative regulation of apoptotic process inferred from genetic interaction with W (Krieser et al., 2007) inferred from mutant phenotype (Krieser et al., 2007) negative regulation of JNK cascade inferred from genetic interaction with puc (Krieser et al., 2007)
Cellular Component
CV term Evidence References
nucleus inferred from direct assay (Krieser et al., 2007)
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
nucleus inferred from sequence or structural similarity with UniProtKB:Q6NYC1 (assigned by UniProtKB) (UniProtKB Project Members, 2005.6.5)
Sequence Ontology: Class of Gene
	gene_with_stop_codon_read_through (Jungreis et al., 2011) nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
PSR - Aats-phe experimental knowledge based, anti tag coimmunoprecipitation, peptide massfingerprinting (Guruharsha et al., 2011, Mintseris et al., 2009.11.23) PSR - Atg4 anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based (Mintseris et al., 2009.11.23, Guruharsha et al., 2011) PSR - CG10347 experimental knowledge based, anti tag coimmunoprecipitation, peptide massfingerprinting (Guruharsha et al., 2011, Mintseris et al., 2009.11.23) PSR - CG11504 anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based (Mintseris et al., 2009.11.23, Guruharsha et al., 2011) PSR - CG11796 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) PSR - CG32698 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) PSR - CG3344 experimental knowledge based (Guruharsha et al., 2011) PSR - CG3793 experimental knowledge based (Guruharsha et al., 2011) PSR - CG4407 experimental knowledge based, anti tag coimmunoprecipitation, peptide massfingerprinting (Guruharsha et al., 2011, Mintseris et al., 2009.11.23) PSR - CG5538 experimental knowledge based, anti tag coimmunoprecipitation, peptide massfingerprinting (Guruharsha et al., 2011, Mintseris et al., 2009.11.23) PSR - CG6712 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) PSR - CG8560 experimental knowledge based (Guruharsha et al., 2011) PSR - CG8814 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) PSR - CG9967 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) PSR - CkIIα anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) PSR - Cyp6a13 experimental knowledge based (Guruharsha et al., 2011) PSR - Cyp6d4 experimental knowledge based (Guruharsha et al., 2011) PSR - Cyp9f2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) PSR - Dlc90F experimental knowledge based (Guruharsha et al., 2011) PSR - Fer1HCH experimental knowledge based (Guruharsha et al., 2011) PSR - Gβ13F anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) PSR - Hexim anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) PSR - Hmgs anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based (Mintseris et al., 2009.11.23, Guruharsha et al., 2011) PSR - Hsp26 experimental knowledge based (Guruharsha et al., 2011) PSR - Hsp60 experimental knowledge based (Guruharsha et al., 2011) PSR - Lst8 experimental knowledge based (Guruharsha et al., 2011) PSR - MRG15 experimental knowledge based (Guruharsha et al., 2011) PSR - ND75 experimental knowledge based, anti tag coimmunoprecipitation, peptide massfingerprinting (Guruharsha et al., 2011, Mintseris et al., 2009.11.23) PSR - Oscillin experimental knowledge based (Guruharsha et al., 2011) PSR - Ote experimental knowledge based, anti tag coimmunoprecipitation, peptide massfingerprinting (Guruharsha et al., 2011, Mintseris et al., 2009.11.23) PSR - SPE experimental knowledge based (Guruharsha et al., 2011) PSR - Tango2 experimental knowledge based (Guruharsha et al., 2011) PSR - Tap42 experimental knowledge based (Guruharsha et al., 2011) PSR - bocksbeutel experimental knowledge based (Guruharsha et al., 2011) PSR - exu anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based (Mintseris et al., 2009.11.23, Guruharsha et al., 2011) PSR - fal anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) PSR - igl experimental knowledge based (Guruharsha et al., 2011) PSR - l(1)G0469 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) PSR - mts anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based (Mintseris et al., 2009.11.23, Guruharsha et al., 2011) PSR - nwk experimental knowledge based (Guruharsha et al., 2011) PSR - santa-maria anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions PSR allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 67574 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0038948 DroID - A comprehensive database of gene and protein interactions. • FBgn0038948 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42616
Orthologs
OrthoDB Orthologs (39) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6JHD1N Dipteran inclusive ortholog search EOG6NGGWC Insect inclusive ortholog search EOG69W1B1 Arthropod inclusive ortholog search EOG60000W Metazoa inclusive ortholog search EOG647TN2
Orthologs in Drosophila Species (EOG6JHD1N)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\PSR     Drosophila simulans   Dsim\GD18469 Y   Drosophila sechellia   Dsec\GM23660 Y   Drosophila erecta   Dere\GG12525 Y   Drosophila yakuba   Dyak\GE24049 Y   Drosophila ananassae   Dana\GF16939 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA18839 Y   Drosophila persimilis   Dper\GL24169 Y   Drosophila willistoni   Dwil\GK14253 Y   Drosophila virilis   Dvir\GJ24074 Y   Drosophila mojavensis   Dmoj\GI22281 Y   Drosophila grimshawi   Dgri\GH19722 Y
Orthologs in non-Drosophila Dipterans (EOG6NGGWC)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL008084   Aedes aegypti Yellow fever mosquito  Aaeg\AAEL013632   Anopheles gambiae Malaria mosquito  Agam\AGAP000158   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ019866
Orthologs in non-Dipteran Insects (EOG69W1B1)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB46775   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG003028   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH13802   Atta cephalotes Leafcutter ant  Acep\ACEP19226   Camponotus floridanus Florida carpenter ant  Cflo\CFLO14360   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL16545   Linepithema humile Argentine ant  Lhum\LH12569   Pogonomyrmex barbatus Red harvester ant  Pbar\PB12153   Solenopsis invicta Red fire ant  Sinv\SINV22638   Acyrthosiphon pisum Pea aphid  Apim\ACYPI009937   Bombyx mori Silkmoth  Bmor\BGIBMGA005792   Pediculus humanus Human body louse  Phum\PHUM477580   Tribolium castaneum Red flour beetle  Tcas\TC014173
Orthologs in non-Insect Arthropods (EOG60000W)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\JGI_V11_216924   Ixodes scapularis Deer tick  Isca\ISCW020652
Orthologs in non-Arthropod Metazoa (EOG647TN2)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\psr-1   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_005205gn   Danio rerio Zebrafish  Drer\jmjd6   Xenopus tropicalis Western clawed frog  Xtro\jmjd6   Gallus gallus Domestic chicken  Ggal\JMJD6   Mus musculus House mouse  Mmus\Jmjd6   Rattus norvegicus Norway rat  Rnor\ENSRNOG00000000250   Homo sapiens Human  Hsap\ENSG00000070495
Human Orthologs (1)
Gene OMIM HGNC Hsap\ENSG00000070495
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD18469 Drosophila sechellia Dsec\GM23660 Drosophila erecta Dere\GG12525 Drosophila yakuba Dyak\GE24049 Drosophila ananassae Dana\GF16939 Drosophila pseudoobscura pseudoobscura Dpse\GA18839 Drosophila persimilis Dper\GL24169 Drosophila willistoni Dwil\GK14253 Drosophila virilis Dvir\GJ24074 Drosophila mojavensis Dmoj\GI22281 Drosophila grimshawi Dgri\GH19722
Stocks & Reagents
Stocks Listed in FlyBase ( 4 )
Bloomington	16798 y1 w67c23; P{EPgy2}PSREY07193 33700 y1 sc* v1; P{TRiP.HMS00576}attP2
VDRC	v22689 w1118; P{GD11631}v22689 v22108 w1118; P{GD11631}v22108/TM3
Genomic Clones ( 1 )
	BACR09L14 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 42 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD25827
Other clones	DPiM_LD25827
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT01782 AT04631 AT31763 GH15904 GM01430 GM05463 GM05481 GM31853 LD05310 LD06051 LD07676 LD09902 LD21195 LD22859 LD23302 LD25607 LD27115 LD28790 LD31306 LD33615 LD36263 LD38244 RE21382 RE28722 RE29918 RE39458 RE62009 RH54228 SD03334 SD03667 SD24483
Other clones	31990 73834 78053 160235 EK142563 EK196406 EK211715 EP08405 FGM213G03
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0038948 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42616
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: PSR CG5383 (Krieser, 2004.3.4)
Source for database merge of	Source for merge of: PSR BEST:LD22859 (Rana, 2004.7.8)
Additional comments
Other Comments
	PSR is needed in wild-type cells for the death of Minute neighbours in cell competition experiments. (Li and Baker, 2007) Identification: in a screen for genes required for the phagocytosis of apoptotic cells in the Drosophila embryo using a panel of Drosophila strains carrying genomic deletions. Several candidate deletions were identified that displayed potential defects in this process. One of these was a large deletion that included the Drosophila homolog of the phosphatidylserine receptor (dPSR). (Krieser et al., 2004) May function to protect from death in Drosophila. (Krieser et al., 2004)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_142769 NM_001275903 RefSeq (Proteins) • NP_651026 NP_001262832 DDBJ / EMBL / GenBank • AA940716 AA941604 AAF55975 AAK93151 AGB96212 AW942817 AY051727 Entrez Gene - A searchable database of RefSeq genes. • 42616 UniProtKB/Swiss-Prot • Q9VD28
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • JmjC domain (IPR003347)
Linkouts
	BioGRID - A database of protein and genetic interactions • 67574 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0038948 DroID - A comprehensive database of gene and protein interactions. • FBgn0038948 DRSC - Results from RNAi screens. • FBgn0038948 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0038948 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG5383-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0038948 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42616 Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution • /genebrief/phosph_ser_rec.htm InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42616 modMine - Data generated by the modENCODE project. • FBgn0038948
Synonyms & Secondary IDs ( 10 )
Reported As
Symbol Synonym	BEST:LD22859   CG5383 (Rana, 2004.7.8, Klose et al., 2006, Curtis et al., 2011, Krieser et al., 2007, Ni et al., 2010.12.1) dPSR (Krieser et al., 2005, Krieser et al., 2004, Krieser et al., 2007, Krieser et al., 2007) L0022859 (Fadok et al., 2000) PS (Bangs et al., 2000) PSR (UniProtKB Project Members, 2005.6.5, Curtis et al., 2011, Jungreis et al., 2011, Cernilogar et al., 2011, Japanese National Institute of Genetics, 2012.5.21) psr (Li and Baker, 2007, Li and Baker, 2007) Psr (Andersen et al., 2010)
Name Synonym	phosphatidylserine receptor (Krieser et al., 2004, Li and Baker, 2007) phosphatidyl-serine receptor (Li and Baker, 2007)
Secondary FlyBase IDs
	FBgn0042088
References ( 31 )
Generate a list of	All references relating to this gene ( 31 )
List References by type	Research paper  ( 8 ) Supplementary material  ( 6 ) Review  ( 2 ) Personal communication to FlyBase  ( 7 ) Abstract  ( 3 ) FlyBase analysis  ( 2 ) Protein sequence record  ( 1 ) Stock list  ( 1 )
Recent research papers ( 3 )
	Lolo et al., 2012, Cell Rep. 2(3): 526--539 Cell competition time line: winners kill losers, which are extruded and engulfed by hemocytes. [FBrf0220993] Cernilogar et al., 2011, Nature 480(7377): 391--395 Chromatin-associated RNA interference components contribute to transcriptional regulation in Drosophila. [FBrf0216979] Curtis et al., 2011, Dev. Biol. 350(2): 534--547 Histone lysine demethylases function as co-repressors of SWI/SNF remodeling activities during Drosophila wing development. [FBrf0212876] Show all research papers ...
Recent reviews (0)
	All reviews listed in FlyBase were published before 2011 Show reviews ...