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Gene Dmel\CG5315

General Information
Symbol	Dmel\CG5315	Species	D. melanogaster
Name		Annotation symbol	CG5315
Feature type	protein_coding_gene	FlyBase ID	FBgn0038984
Gene Model Status	Current	Stock availability	5 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	94B3-94B3	Sequence location	3R:18,369,415..18,373,568 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG5315 (FBgn0038984). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: hormone binding. Based on sequence similarity, it is predicted to be involved in the biological process: hormone-mediated signaling pathway; fatty acid oxidation. 5 alleles are reported. No phenotypic data is available. It has 5 annotated transcripts and 5 annotated polypeptides. Protein features are: Hly-III-related. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed at stages throughout embryogenesis, during late larval stages, at stages throughout the pupal period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult midgut, adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, adult salivary gland, adult spermathecae, adult male accessory gland, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system, larval hindgut, larval salivary gland, larval trachea, adult ovary, adult testis, larval carcass. Comments on Affy2 ProbeSet: ProbeSet 1636967_a_at completely aligns to an exonic region common to each of the 3 FlyBase-annotated transcript isoforms of CG5315. Gene sequence location is 3R:18369415..18373568.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 94B3-94B3   Limits computationally determined from genome sequence between P{PZ}l(3)rQ178rQ178 and P{lacW}Dph5L4910
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG5315 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.40 Gene model reviewed during 5.47 Low-frequency RNA-Seq exon junction(s) not annotated. Annotated transcripts do not represent all supported alternative splices within 5' UTR.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG5315-RA FBtr0084282  NM_142804   2299   444 CG5315-RB FBtr0084284  NM_170020   1618   362 CG5315-RC FBtr0084283  NM_170019   2186   444 CG5315-RD FBtr0308848  NM_001260310   1875   444 CG5315-RE FBtr0334561  NM_001275915   1869   444
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG5315-PA   FBpp0083675   49.8   444   4.97     NP_651061   AAF56016 CG5315-PB   FBpp0083677   41.2   362   6.87     NP_732759   AAF56017 CG5315-PC   FBpp0083676   49.8   444   4.97     NP_732758   AAN13909 CG5315-PD   FBpp0301003   49.8   444   4.97     NP_001247239   AFH06557 CG5315-PE   FBpp0306628   49.8   444   4.97     NP_001262844   AGB96224
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Hly-III-related (IPR004254)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA140983   AA140984   AA142208   AA142209   AA698099   AA820298   AA820551   AA950770   AE014297 AAF56016   AE014297 AAF56017   AE014297 AAN13909   AE014297 AFH06557   AE014297 AGB96224   AI063414   AI063796   AI064081   AI064395   AI064402   AI064685   AI107634   AI107972   AI134899   AI135022   AI238882   AI292909   AI387634   AI388465   AI403067   AI404646   AI404654   AI455386   AI514188   AI517214   BE977225   BF489318   BF493684   BF494968   BF498061   BF503151   BF506163   BG634283   BG637258   BG638405   BI229823   BI236345   BI238698   BI242021   BI242750   BI367587   BI369116   BI565657   BI568145   BI571954   BI573034   BI575848   BI583517   BI584765   BI585801   BI591856   BI605560   BI607620   BI609325   BI609461   BI613584   BI613942   BI614628   BI615387   BI615580   BI615628   BI618154   BI618591   BI618722   BI618947   BI619367   BI619841   BI620992   BI621718   BI625357   BI625898   BI628500   BI629039   BI629612   BI633601   BI634386   BI636139   BI637570   BI638597   BT001487 AAN71242   BT099567   BT133262   BT133272   CK131818   CK605075   CK605076   CO153222   CO177172   CO188023   CO261967   CO264049   CO267614   CO268624   CO270453   CO271943   CO271996   CO273772   CO274491   CO274657   CO275395   CO279553   CO280277   CO282199   CO285748   CO289414   CO289875   CO293556   CO295403   CO299451   CO299526   CO299646   CO299821   CO302030   CO303173   CO303542   CO313269   CO317769   CO320622   CO322705   CO323559   CO325770   CZ467723   CZ467724   CZ487957   CZ487958   EC057263   EC062208   EC063489   EC067249   EC070928   EC072098   EC072187   EC073174   EC073723   EC080991   EC083044   EC083793   EC085181   EC087323   EC088393   EC089042   EC202620   EC209910   EC210709   EC211988   EC212792   EC214404   EC219114   EC219767   EC220945   EC228566   EC232532   EC232782   EC234013   EC234182   EC235725   EC238680   EC242225   EC242790   EC244441   EC246174   EC249005   EC261779   EL870079   EL870080   EL870082   EL874227   EL874228   EL874337   EL874338   EL882116   EV584239   EV584327
UniProtKB/Swiss-Prot	Q9VCY8
UniProtKB/TrEMBL	A4V392
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism | ubiquitous   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 4 -- 6   organism   (Fisher et al., 2012) Comment:rapidly degraded organism | faint & ubiquitous   (Fisher et al., 2012) embryonic stage 7 -- 8   organism | faint & ubiquitous   (Fisher et al., 2012) organism | ubiquitous   (Fisher et al., 2012) embryonic stage 9 -- 10   anterior endoderm   (Fisher et al., 2012) organism | faint & ubiquitous   (Fisher et al., 2012) posterior endoderm   (Fisher et al., 2012) organism | ubiquitous   (Fisher et al., 2012) embryonic stage 11 -- 12   anterior midgut primordium   (Fisher et al., 2012) organism | faint & ubiquitous   (Fisher et al., 2012) posterior midgut primordium   (Fisher et al., 2012) visceral muscle primordium   (Fisher et al., 2012) organism | intense & ubiquitous   (Fisher et al., 2012) organism | ubiquitous   (Fisher et al., 2012) embryonic stage 13 -- 16   embryonic/larval circulatory system   (Fisher et al., 2012) embryonic/larval midgut   (Fisher et al., 2012) embryonic/larval visceral muscle   (Fisher et al., 2012) organism | faint & ubiquitous   (Fisher et al., 2012) organism | intense & ubiquitous   (Fisher et al., 2012) organism | ubiquitous   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult midgut, adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, adult salivary gland, adult spermathecae, adult male accessory gland, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system, larval hindgut, larval salivary gland, larval trachea, adult ovary, adult testis, larval carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    414.475 Larval Midgut    642.7 Larval Hindgut    427.6 Larval Malpighian Tubules    674 Larval Fat Body    702 Larval Salivary Gland    386.3 Larval Trachea    438.65 Larval Carcass    272.975 Adult Head    2183.5 Adult Eye    2811.925 Adult Brain    1021.9 Adult Thoracic-Abdominal Ganglion    1139.6 Adult Crop    2719.1 Adult Midgut    957.5 Adult Hindgut    1990.9 Adult Malpighian Tubules    551 Adult Fat Body    3572.2 Adult Salivary Gland    1225.3 Adult Heart    3391.8 Adult VirginFemale Spermatheca    4414.2 Adult InseminatedFemale Spermatheca    3933.4 Adult Ovary    134.8 Adult Testis    107.8 Adult Male Accessory Gland    1042.6 Adult Carcass    2573.9 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    414.475 Larval Midgut  (642.7) Larval Hindgut    427.6 Larval Malpighian Tubules  (674) Larval Fat Body  (702) Larval Salivary Gland    386.3 Larval Trachea    438.65 Larval Carcass    272.975 Adult Head  (2183.5) Adult Eye  (2811.925) Adult Brain  (1021.9) Adult Thoracic-Abdominal Ganglion  (1139.6) Adult Crop  (2719.1) Adult Midgut  (957.5) Adult Hindgut  (1990.9) Adult Malpighian Tubules  (551) Adult Fat Body  (3572.2) Adult Salivary Gland  (1225.3) Adult Heart  (3391.8) Adult VirginFemale Spermatheca  (4414.2) Adult InseminatedFemale Spermatheca  (3933.4) Adult Ovary    134.8 Adult Testis    107.8 Adult Male Accessory Gland  (1042.6) Adult Carcass  (2573.9) Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    414.475 Larval Midgut    642.7 Larval Hindgut    427.6 Larval Malpighian Tubules    674 Larval Fat Body    702 Larval Salivary Gland    386.3 Larval Trachea    438.65 Larval Carcass    272.975 Adult Head  (2183.5) Adult Eye  (2811.925) Adult Brain  1021.9 Adult Thoracic-Abdominal Ganglion  (1139.6) Adult Crop  (2719.1) Adult Midgut    957.5 Adult Hindgut  (1990.9) Adult Malpighian Tubules    551 Adult Fat Body  (3572.2) Adult Salivary Gland  (1225.3) Adult Heart  (3391.8) Adult VirginFemale Spermatheca  (4414.2) Adult InseminatedFemale Spermatheca  (3933.4) Adult Ovary    134.8 Adult Testis    107.8 Adult Male Accessory Gland  1042.6 Adult Carcass  (2573.9) Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    414.475 Larval Midgut    642.7 Larval Hindgut    427.6 Larval Malpighian Tubules    674 Larval Fat Body    702 Larval Salivary Gland    386.3 Larval Trachea    438.65 Larval Carcass    272.975 Adult Head    2183.5 Adult Eye    2811.925 Adult Brain    1021.9 Adult Thoracic-Abdominal Ganglion    1139.6 Adult Crop    2719.1 Adult Midgut    957.5 Adult Hindgut    1990.9 Adult Malpighian Tubules    551 Adult Fat Body    3572.2 Adult Salivary Gland    1225.3 Adult Heart    3391.8 Adult VirginFemale Spermatheca    4414.2 Adult InseminatedFemale Spermatheca    3933.4 Adult Ovary    134.8 Adult Testis    107.8 Adult Male Accessory Gland    1042.6 Adult Carcass    2573.9 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    414.475 Larval Midgut    642.7 Larval Hindgut    427.6 Larval Malpighian Tubules    674 Larval Fat Body    702 Larval Salivary Gland    386.3 Larval Trachea    438.65 Larval Carcass    272.975 Adult Head    2183.5 Adult Eye    2811.925 Adult Brain    1021.9 Adult Thoracic-Abdominal Ganglion    1139.6 Adult Crop    2719.1 Adult Midgut    957.5 Adult Hindgut    1990.9 Adult Malpighian Tubules    551 Adult Fat Body    3572.2 Adult Salivary Gland    1225.3 Adult Heart    3391.8 Adult VirginFemale Spermatheca    4414.2 Adult InseminatedFemale Spermatheca    3933.4 Adult Ovary    134.8 Adult Testis    107.8 Adult Male Accessory Gland    1042.6 Adult Carcass    2573.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    414.475 Larval Midgut  642.7 Larval Hindgut    427.6 Larval Malpighian Tubules  674 Larval Fat Body  702 Larval Salivary Gland    386.3 Larval Trachea    438.65 Larval Carcass    272.975 Adult Head  (2183.5) Adult Eye  (2811.925) Adult Brain  (1021.9) Adult Thoracic-Abdominal Ganglion  (1139.6) Adult Crop  (2719.1) Adult Midgut  (957.5) Adult Hindgut  (1990.9) Adult Malpighian Tubules  551 Adult Fat Body  (3572.2) Adult Salivary Gland  (1225.3) Adult Heart  (3391.8) Adult VirginFemale Spermatheca  (4414.2) Adult InseminatedFemale Spermatheca  (3933.4) Adult Ovary    134.8 Adult Testis    107.8 Adult Male Accessory Gland  (1042.6) Adult Carcass  (2573.9) Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    414.475 Larval Midgut    642.7 Larval Hindgut    427.6 Larval Malpighian Tubules    674 Larval Fat Body    702 Larval Salivary Gland    386.3 Larval Trachea    438.65 Larval Carcass    272.975 Adult Head  (2183.5) Adult Eye  (2811.925) Adult Brain  1021.9 Adult Thoracic-Abdominal Ganglion  1139.6 Adult Crop  (2719.1) Adult Midgut    957.5 Adult Hindgut  (1990.9) Adult Malpighian Tubules    551 Adult Fat Body  (3572.2) Adult Salivary Gland  1225.3 Adult Heart  (3391.8) Adult VirginFemale Spermatheca  (4414.2) Adult InseminatedFemale Spermatheca  (3933.4) Adult Ovary    134.8 Adult Testis    107.8 Adult Male Accessory Gland  1042.6 Adult Carcass  (2573.9) Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    414.475 Larval Midgut    642.7 Larval Hindgut    427.6 Larval Malpighian Tubules    674 Larval Fat Body    702 Larval Salivary Gland    386.3 Larval Trachea    438.65 Larval Carcass    272.975 Adult Head    2183.5 Adult Eye    2811.925 Adult Brain    1021.9 Adult Thoracic-Abdominal Ganglion    1139.6 Adult Crop    2719.1 Adult Midgut    957.5 Adult Hindgut    1990.9 Adult Malpighian Tubules    551 Adult Fat Body    3572.2 Adult Salivary Gland    1225.3 Adult Heart    3391.8 Adult VirginFemale Spermatheca    4414.2 Adult InseminatedFemale Spermatheca    3933.4 Adult Ovary    134.8 Adult Testis    107.8 Adult Male Accessory Gland    1042.6 Adult Carcass    2573.9 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    2183.5   NA  Eye    2811.925   NA  Brain    1021.9   414.475  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    1139.6   NA  Crop    2719.1   642.7  Midgut    957.5   427.6  Hindgut    1990.9   674  Malpighian Tubules    551   702  Fat Body    3572.2   386.3  Salivary Gland    1225.3   NA  Heart    3391.8   438.65  Trachea    NA   NA  VirginFemale Spermatheca    4414.2   NA  InseminatedFemale Spermatheca    3933.4   NA  Ovary    134.8   NA  Testis    107.8   NA  Male Accessory Gland    1042.6   272.975  Carcass    2573.9 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    22 central nervous system, pupae P8    54 head, virgin 1-day female    90 head, virgin 4-day female    129 head, virgin 20-day female    190 head, mated 1-day female    84 head, mated 4-day female    133 head, mated 20-day female    133 head, mated 1-day male    104 head, mated 4-day male    131 head, mated 20-day male    147 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    27 digestive system, larvae L3 wandering    52 digestive system, 1-day adult    55 digestive system, 4-day adult    54 digestive system, 20-day adult    46 fat body, larvae L3 wandering    27 fat body, white prepupae    27 fat body, pupae P8    52 carcass, larvae L3 wandering    22 carcass, 1-day adult    80 carcass, 4-day adult    102 carcass, 20-day adult    130 ovary, virgin 4-day female    39 ovary, mated 4-day female    26 testis, mated 4-day male    86 accessory gland, mated 4-day male    46 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (49) central nervous system, larvae L3    22 central nervous system, pupae P8  (54) head, virgin 1-day female  (90) head, virgin 4-day female  (129) head, virgin 20-day female  (190) head, mated 1-day female  (84) head, mated 4-day female  (133) head, mated 20-day female  (133) head, mated 1-day male  (104) head, mated 4-day male  (131) head, mated 20-day male  (147) salivary gland, larvae L3 wandering    13 salivary gland, white prepupae  (27) digestive system, larvae L3 wandering  (52) digestive system, 1-day adult  (55) digestive system, 4-day adult  (54) digestive system, 20-day adult  (46) fat body, larvae L3 wandering  (27) fat body, white prepupae  (27) fat body, pupae P8  (52) carcass, larvae L3 wandering    22 carcass, 1-day adult  (80) carcass, 4-day adult  (102) carcass, 20-day adult  (130) ovary, virgin 4-day female  (39) ovary, mated 4-day female  26 testis, mated 4-day male  (86) accessory gland, mated 4-day male  (46) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    22 central nervous system, pupae P8    54 head, virgin 1-day female    90 head, virgin 4-day female  (129) head, virgin 20-day female  (190) head, mated 1-day female    84 head, mated 4-day female  (133) head, mated 20-day female  (133) head, mated 1-day male  104 head, mated 4-day male  (131) head, mated 20-day male  (147) salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    27 digestive system, larvae L3 wandering    52 digestive system, 1-day adult    55 digestive system, 4-day adult    54 digestive system, 20-day adult    46 fat body, larvae L3 wandering    27 fat body, white prepupae    27 fat body, pupae P8    52 carcass, larvae L3 wandering    22 carcass, 1-day adult    80 carcass, 4-day adult  102 carcass, 20-day adult  (130) ovary, virgin 4-day female    39 ovary, mated 4-day female    26 testis, mated 4-day male    86 accessory gland, mated 4-day male    46 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    22 central nervous system, pupae P8    54 head, virgin 1-day female    90 head, virgin 4-day female    129 head, virgin 20-day female    190 head, mated 1-day female    84 head, mated 4-day female    133 head, mated 20-day female    133 head, mated 1-day male    104 head, mated 4-day male    131 head, mated 20-day male    147 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    27 digestive system, larvae L3 wandering    52 digestive system, 1-day adult    55 digestive system, 4-day adult    54 digestive system, 20-day adult    46 fat body, larvae L3 wandering    27 fat body, white prepupae    27 fat body, pupae P8    52 carcass, larvae L3 wandering    22 carcass, 1-day adult    80 carcass, 4-day adult    102 carcass, 20-day adult    130 ovary, virgin 4-day female    39 ovary, mated 4-day female    26 testis, mated 4-day male    86 accessory gland, mated 4-day male    46 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    22 central nervous system, pupae P8    54 head, virgin 1-day female    90 head, virgin 4-day female    129 head, virgin 20-day female    190 head, mated 1-day female    84 head, mated 4-day female    133 head, mated 20-day female    133 head, mated 1-day male    104 head, mated 4-day male    131 head, mated 20-day male    147 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    27 digestive system, larvae L3 wandering    52 digestive system, 1-day adult    55 digestive system, 4-day adult    54 digestive system, 20-day adult    46 fat body, larvae L3 wandering    27 fat body, white prepupae    27 fat body, pupae P8    52 carcass, larvae L3 wandering    22 carcass, 1-day adult    80 carcass, 4-day adult    102 carcass, 20-day adult    130 ovary, virgin 4-day female    39 ovary, mated 4-day female    26 testis, mated 4-day male    86 accessory gland, mated 4-day male    46 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (49) central nervous system, larvae L3    22 central nervous system, pupae P8  (54) head, virgin 1-day female  (90) head, virgin 4-day female  (129) head, virgin 20-day female  (190) head, mated 1-day female  (84) head, mated 4-day female  (133) head, mated 20-day female  (133) head, mated 1-day male  (104) head, mated 4-day male  (131) head, mated 20-day male  (147) salivary gland, larvae L3 wandering    13 salivary gland, white prepupae  27 digestive system, larvae L3 wandering  (52) digestive system, 1-day adult  (55) digestive system, 4-day adult  (54) digestive system, 20-day adult  (46) fat body, larvae L3 wandering  27 fat body, white prepupae  27 fat body, pupae P8  (52) carcass, larvae L3 wandering    22 carcass, 1-day adult  (80) carcass, 4-day adult  (102) carcass, 20-day adult  (130) ovary, virgin 4-day female  (39) ovary, mated 4-day female  26 testis, mated 4-day male  (86) accessory gland, mated 4-day male  (46) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    22 central nervous system, pupae P8    54 head, virgin 1-day female    90 head, virgin 4-day female  129 head, virgin 20-day female  (190) head, mated 1-day female    84 head, mated 4-day female  133 head, mated 20-day female  133 head, mated 1-day male  104 head, mated 4-day male  131 head, mated 20-day male  (147) salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    27 digestive system, larvae L3 wandering    52 digestive system, 1-day adult    55 digestive system, 4-day adult    54 digestive system, 20-day adult    46 fat body, larvae L3 wandering    27 fat body, white prepupae    27 fat body, pupae P8    52 carcass, larvae L3 wandering    22 carcass, 1-day adult    80 carcass, 4-day adult  102 carcass, 20-day adult  130 ovary, virgin 4-day female    39 ovary, mated 4-day female    26 testis, mated 4-day male    86 accessory gland, mated 4-day male    46 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    22 central nervous system, pupae P8    54 head, virgin 1-day female    90 head, virgin 4-day female    129 head, virgin 20-day female    190 head, mated 1-day female    84 head, mated 4-day female    133 head, mated 20-day female    133 head, mated 1-day male    104 head, mated 4-day male    131 head, mated 20-day male    147 salivary gland, larvae L3 wandering    13 salivary gland, white prepupae    27 digestive system, larvae L3 wandering    52 digestive system, 1-day adult    55 digestive system, 4-day adult    54 digestive system, 20-day adult    46 fat body, larvae L3 wandering    27 fat body, white prepupae    27 fat body, pupae P8    52 carcass, larvae L3 wandering    22 carcass, 1-day adult    80 carcass, 4-day adult    102 carcass, 20-day adult    130 ovary, virgin 4-day female    39 ovary, mated 4-day female    26 testis, mated 4-day male    86 accessory gland, mated 4-day male    46 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed at stages throughout embryogenesis, during late larval stages, at stages throughout the pupal period, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    50 embryo 02-04hr    38 embryo 04-06hr    69 embryo 06-08hr    76 embryo 08-10hr    77 embryo 10-12hr    101 embryo 12-14hr    80 embryo 14-16hr    66 embryo 16-18hr    65 embryo 18-20hr    54 embryo 20-22hr    33 embryo 22-24hr    42 larva L1    34 larva L2    41 larva L3 12hr old    41 larva L3 puffstage 1-2    36 larva L3 puffstage 3-6    49 larva L3 puffstage 7-9    60 white prepupae new    67 white prepupae 12hr    64 white prepupae 24hr    49 pupae 2d postWPP    70 pupae 3d postWPP    58 pupae 4d postWPP    50 adult male 01day    104 adult male 05day    106 adult male 30day    86 adult female 01day    61 adult female 05day    68 adult female 30day    63 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (50) embryo 02-04hr  (38) embryo 04-06hr  (69) embryo 06-08hr  (76) embryo 08-10hr  (77) embryo 10-12hr  (101) embryo 12-14hr  (80) embryo 14-16hr  (66) embryo 16-18hr  (65) embryo 18-20hr  (54) embryo 20-22hr  (33) embryo 22-24hr  (42) larva L1  (34) larva L2  (41) larva L3 12hr old  (41) larva L3 puffstage 1-2  (36) larva L3 puffstage 3-6  (49) larva L3 puffstage 7-9  (60) white prepupae new  (67) white prepupae 12hr  (64) white prepupae 24hr  (49) pupae 2d postWPP  (70) pupae 3d postWPP  (58) pupae 4d postWPP  (50) adult male 01day  (104) adult male 05day  (106) adult male 30day  (86) adult female 01day  (61) adult female 05day  (68) adult female 30day  (63) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    50 embryo 02-04hr    38 embryo 04-06hr    69 embryo 06-08hr    76 embryo 08-10hr    77 embryo 10-12hr  101 embryo 12-14hr    80 embryo 14-16hr    66 embryo 16-18hr    65 embryo 18-20hr    54 embryo 20-22hr    33 embryo 22-24hr    42 larva L1    34 larva L2    41 larva L3 12hr old    41 larva L3 puffstage 1-2    36 larva L3 puffstage 3-6    49 larva L3 puffstage 7-9    60 white prepupae new    67 white prepupae 12hr    64 white prepupae 24hr    49 pupae 2d postWPP    70 pupae 3d postWPP    58 pupae 4d postWPP    50 adult male 01day  104 adult male 05day  106 adult male 30day    86 adult female 01day    61 adult female 05day    68 adult female 30day    63 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    50 embryo 02-04hr    38 embryo 04-06hr    69 embryo 06-08hr    76 embryo 08-10hr    77 embryo 10-12hr    101 embryo 12-14hr    80 embryo 14-16hr    66 embryo 16-18hr    65 embryo 18-20hr    54 embryo 20-22hr    33 embryo 22-24hr    42 larva L1    34 larva L2    41 larva L3 12hr old    41 larva L3 puffstage 1-2    36 larva L3 puffstage 3-6    49 larva L3 puffstage 7-9    60 white prepupae new    67 white prepupae 12hr    64 white prepupae 24hr    49 pupae 2d postWPP    70 pupae 3d postWPP    58 pupae 4d postWPP    50 adult male 01day    104 adult male 05day    106 adult male 30day    86 adult female 01day    61 adult female 05day    68 adult female 30day    63 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    50 embryo 02-04hr    38 embryo 04-06hr    69 embryo 06-08hr    76 embryo 08-10hr    77 embryo 10-12hr    101 embryo 12-14hr    80 embryo 14-16hr    66 embryo 16-18hr    65 embryo 18-20hr    54 embryo 20-22hr    33 embryo 22-24hr    42 larva L1    34 larva L2    41 larva L3 12hr old    41 larva L3 puffstage 1-2    36 larva L3 puffstage 3-6    49 larva L3 puffstage 7-9    60 white prepupae new    67 white prepupae 12hr    64 white prepupae 24hr    49 pupae 2d postWPP    70 pupae 3d postWPP    58 pupae 4d postWPP    50 adult male 01day    104 adult male 05day    106 adult male 30day    86 adult female 01day    61 adult female 05day    68 adult female 30day    63 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (50) embryo 02-04hr  (38) embryo 04-06hr  (69) embryo 06-08hr  (76) embryo 08-10hr  (77) embryo 10-12hr  (101) embryo 12-14hr  (80) embryo 14-16hr  (66) embryo 16-18hr  (65) embryo 18-20hr  (54) embryo 20-22hr  (33) embryo 22-24hr  (42) larva L1  (34) larva L2  (41) larva L3 12hr old  (41) larva L3 puffstage 1-2  (36) larva L3 puffstage 3-6  (49) larva L3 puffstage 7-9  (60) white prepupae new  (67) white prepupae 12hr  (64) white prepupae 24hr  (49) pupae 2d postWPP  (70) pupae 3d postWPP  (58) pupae 4d postWPP  (50) adult male 01day  (104) adult male 05day  (106) adult male 30day  (86) adult female 01day  (61) adult female 05day  (68) adult female 30day  (63) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    50 embryo 02-04hr    38 embryo 04-06hr    69 embryo 06-08hr    76 embryo 08-10hr    77 embryo 10-12hr  101 embryo 12-14hr    80 embryo 14-16hr    66 embryo 16-18hr    65 embryo 18-20hr    54 embryo 20-22hr    33 embryo 22-24hr    42 larva L1    34 larva L2    41 larva L3 12hr old    41 larva L3 puffstage 1-2    36 larva L3 puffstage 3-6    49 larva L3 puffstage 7-9    60 white prepupae new    67 white prepupae 12hr    64 white prepupae 24hr    49 pupae 2d postWPP    70 pupae 3d postWPP    58 pupae 4d postWPP    50 adult male 01day  104 adult male 05day  106 adult male 30day    86 adult female 01day    61 adult female 05day    68 adult female 30day    63 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    50 embryo 02-04hr    38 embryo 04-06hr    69 embryo 06-08hr    76 embryo 08-10hr    77 embryo 10-12hr    101 embryo 12-14hr    80 embryo 14-16hr    66 embryo 16-18hr    65 embryo 18-20hr    54 embryo 20-22hr    33 embryo 22-24hr    42 larva L1    34 larva L2    41 larva L3 12hr old    41 larva L3 puffstage 1-2    36 larva L3 puffstage 3-6    49 larva L3 puffstage 7-9    60 white prepupae new    67 white prepupae 12hr    64 white prepupae 24hr    49 pupae 2d postWPP    70 pupae 3d postWPP    58 pupae 4d postWPP    50 adult male 01day    104 adult male 05day    106 adult male 30day    86 adult female 01day    61 adult female 05day    68 adult female 30day    63 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    103 Schneider line 2 Sg4    56 embryonic 1182-4H    24 embryonic GM2    64 embryonic Kc167    57 embryonic S1    29 embryonic S3    70 leg disc CME L1    36 wing disc CME-W2    68 wing disc ML-DmD8    29 wing disc ML-DmD9    18 wing disc ML-DmD16-c3    29 wing disc ML-DmD21    30 wing disc ML-DmD32    22 haltere disc ML-DmD17-c3    34 eye-antennal disc ML-DmD11    26 antennal disc ML-DmD20-c5    40 mixed discs ML-DmD4-c1    43 CNS ML-DmBG1-c1    29 CNS ML-DmBG2-c2    49 tumorous blood cells mbn2    54 ovary fGS/OSS    22 ovary OSC    17 ovary OSS    13 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (103) Schneider line 2 Sg4  (56) embryonic 1182-4H    24 embryonic GM2  (64) embryonic Kc167  (57) embryonic S1  (29) embryonic S3  (70) leg disc CME L1  (36) wing disc CME-W2  (68) wing disc ML-DmD8  (29) wing disc ML-DmD9    18 wing disc ML-DmD16-c3  (29) wing disc ML-DmD21  (30) wing disc ML-DmD32    22 haltere disc ML-DmD17-c3  (34) eye-antennal disc ML-DmD11  26 antennal disc ML-DmD20-c5  (40) mixed discs ML-DmD4-c1  (43) CNS ML-DmBG1-c1  (29) CNS ML-DmBG2-c2  (49) tumorous blood cells mbn2  (54) ovary fGS/OSS    22 ovary OSC    17 ovary OSS    13 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  103 Schneider line 2 Sg4    56 embryonic 1182-4H    24 embryonic GM2    64 embryonic Kc167    57 embryonic S1    29 embryonic S3    70 leg disc CME L1    36 wing disc CME-W2    68 wing disc ML-DmD8    29 wing disc ML-DmD9    18 wing disc ML-DmD16-c3    29 wing disc ML-DmD21    30 wing disc ML-DmD32    22 haltere disc ML-DmD17-c3    34 eye-antennal disc ML-DmD11    26 antennal disc ML-DmD20-c5    40 mixed discs ML-DmD4-c1    43 CNS ML-DmBG1-c1    29 CNS ML-DmBG2-c2    49 tumorous blood cells mbn2    54 ovary fGS/OSS    22 ovary OSC    17 ovary OSS    13 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    103 Schneider line 2 Sg4    56 embryonic 1182-4H    24 embryonic GM2    64 embryonic Kc167    57 embryonic S1    29 embryonic S3    70 leg disc CME L1    36 wing disc CME-W2    68 wing disc ML-DmD8    29 wing disc ML-DmD9    18 wing disc ML-DmD16-c3    29 wing disc ML-DmD21    30 wing disc ML-DmD32    22 haltere disc ML-DmD17-c3    34 eye-antennal disc ML-DmD11    26 antennal disc ML-DmD20-c5    40 mixed discs ML-DmD4-c1    43 CNS ML-DmBG1-c1    29 CNS ML-DmBG2-c2    49 tumorous blood cells mbn2    54 ovary fGS/OSS    22 ovary OSC    17 ovary OSS    13 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    103 Schneider line 2 Sg4    56 embryonic 1182-4H    24 embryonic GM2    64 embryonic Kc167    57 embryonic S1    29 embryonic S3    70 leg disc CME L1    36 wing disc CME-W2    68 wing disc ML-DmD8    29 wing disc ML-DmD9    18 wing disc ML-DmD16-c3    29 wing disc ML-DmD21    30 wing disc ML-DmD32    22 haltere disc ML-DmD17-c3    34 eye-antennal disc ML-DmD11    26 antennal disc ML-DmD20-c5    40 mixed discs ML-DmD4-c1    43 CNS ML-DmBG1-c1    29 CNS ML-DmBG2-c2    49 tumorous blood cells mbn2    54 ovary fGS/OSS    22 ovary OSC    17 ovary OSS    13 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (103) Schneider line 2 Sg4  (56) embryonic 1182-4H    24 embryonic GM2  (64) embryonic Kc167  (57) embryonic S1  29 embryonic S3  (70) leg disc CME L1  (36) wing disc CME-W2  (68) wing disc ML-DmD8  29 wing disc ML-DmD9    18 wing disc ML-DmD16-c3  29 wing disc ML-DmD21  30 wing disc ML-DmD32    22 haltere disc ML-DmD17-c3  (34) eye-antennal disc ML-DmD11  26 antennal disc ML-DmD20-c5  (40) mixed discs ML-DmD4-c1  (43) CNS ML-DmBG1-c1  29 CNS ML-DmBG2-c2  (49) tumorous blood cells mbn2  (54) ovary fGS/OSS    22 ovary OSC    17 ovary OSS    13 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  103 Schneider line 2 Sg4    56 embryonic 1182-4H    24 embryonic GM2    64 embryonic Kc167    57 embryonic S1    29 embryonic S3    70 leg disc CME L1    36 wing disc CME-W2    68 wing disc ML-DmD8    29 wing disc ML-DmD9    18 wing disc ML-DmD16-c3    29 wing disc ML-DmD21    30 wing disc ML-DmD32    22 haltere disc ML-DmD17-c3    34 eye-antennal disc ML-DmD11    26 antennal disc ML-DmD20-c5    40 mixed discs ML-DmD4-c1    43 CNS ML-DmBG1-c1    29 CNS ML-DmBG2-c2    49 tumorous blood cells mbn2    54 ovary fGS/OSS    22 ovary OSC    17 ovary OSS    13 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    103 Schneider line 2 Sg4    56 embryonic 1182-4H    24 embryonic GM2    64 embryonic Kc167    57 embryonic S1    29 embryonic S3    70 leg disc CME L1    36 wing disc CME-W2    68 wing disc ML-DmD8    29 wing disc ML-DmD9    18 wing disc ML-DmD16-c3    29 wing disc ML-DmD21    30 wing disc ML-DmD32    22 haltere disc ML-DmD17-c3    34 eye-antennal disc ML-DmD11    26 antennal disc ML-DmD20-c5    40 mixed discs ML-DmD4-c1    43 CNS ML-DmBG1-c1    29 CNS ML-DmBG2-c2    49 tumorous blood cells mbn2    54 ovary fGS/OSS    22 ovary OSC    17 ovary OSS    13 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    19 cold shock, 4-day adult    12 heat shock, 4-day adult    37 Cadmium 50 mM 6 hrs, larvae L3    32 Cadmium 50 mM 12 hrs, larvae L3    49 Cadmium 50 mM 48 hrs, 4-day adult    39 Cadmium 100 mM 48 hrs, 4-day adult    57 Copper 0.5 mM 12 hrs, larvae L3    13 Copper 15 mM 48 hrs, 4-day adult    98 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    91 Ethanol 2.5% 3 hrs, larvae L3    54 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    31 Caffeine 1.5 mg/ml 4 hrs, larvae L3    38 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    75 Caffeine 25 mg/ml 48 hrs, 4-day adult    24 Paraquat 5 mM 48 hrs, 4-day adult    77 Paraquat 10 mM 48 hrs, 4-day adult    66 Rotenone 2 μg 12 hrs, larvae L3    43 Rotenone 8 μg 12 hrs, larvae L3    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    19 cold shock, 4-day adult    12 heat shock, 4-day adult  (37) Cadmium 50 mM 6 hrs, larvae L3  (32) Cadmium 50 mM 12 hrs, larvae L3  (49) Cadmium 50 mM 48 hrs, 4-day adult  (39) Cadmium 100 mM 48 hrs, 4-day adult  (57) Copper 0.5 mM 12 hrs, larvae L3    13 Copper 15 mM 48 hrs, 4-day adult  (98) Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult  (91) Ethanol 2.5% 3 hrs, larvae L3  (54) Ethanol 5% 3 hrs, larvae L3  (45) Ethanol 10% 3 hrs, larvae L3  (31) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (38) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (75) Caffeine 25 mg/ml 48 hrs, 4-day adult    24 Paraquat 5 mM 48 hrs, 4-day adult  (77) Paraquat 10 mM 48 hrs, 4-day adult  (66) Rotenone 2 μg 12 hrs, larvae L3  (43) Rotenone 8 μg 12 hrs, larvae L3  (29) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    19 cold shock, 4-day adult    12 heat shock, 4-day adult    37 Cadmium 50 mM 6 hrs, larvae L3    32 Cadmium 50 mM 12 hrs, larvae L3    49 Cadmium 50 mM 48 hrs, 4-day adult    39 Cadmium 100 mM 48 hrs, 4-day adult    57 Copper 0.5 mM 12 hrs, larvae L3    13 Copper 15 mM 48 hrs, 4-day adult    98 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    91 Ethanol 2.5% 3 hrs, larvae L3    54 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    31 Caffeine 1.5 mg/ml 4 hrs, larvae L3    38 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    75 Caffeine 25 mg/ml 48 hrs, 4-day adult    24 Paraquat 5 mM 48 hrs, 4-day adult    77 Paraquat 10 mM 48 hrs, 4-day adult    66 Rotenone 2 μg 12 hrs, larvae L3    43 Rotenone 8 μg 12 hrs, larvae L3    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    19 cold shock, 4-day adult    12 heat shock, 4-day adult    37 Cadmium 50 mM 6 hrs, larvae L3    32 Cadmium 50 mM 12 hrs, larvae L3    49 Cadmium 50 mM 48 hrs, 4-day adult    39 Cadmium 100 mM 48 hrs, 4-day adult    57 Copper 0.5 mM 12 hrs, larvae L3    13 Copper 15 mM 48 hrs, 4-day adult    98 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    91 Ethanol 2.5% 3 hrs, larvae L3    54 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    31 Caffeine 1.5 mg/ml 4 hrs, larvae L3    38 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    75 Caffeine 25 mg/ml 48 hrs, 4-day adult    24 Paraquat 5 mM 48 hrs, 4-day adult    77 Paraquat 10 mM 48 hrs, 4-day adult    66 Rotenone 2 μg 12 hrs, larvae L3    43 Rotenone 8 μg 12 hrs, larvae L3    29 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    19 cold shock, 4-day adult    12 heat shock, 4-day adult    37 Cadmium 50 mM 6 hrs, larvae L3    32 Cadmium 50 mM 12 hrs, larvae L3    49 Cadmium 50 mM 48 hrs, 4-day adult    39 Cadmium 100 mM 48 hrs, 4-day adult    57 Copper 0.5 mM 12 hrs, larvae L3    13 Copper 15 mM 48 hrs, 4-day adult    98 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    91 Ethanol 2.5% 3 hrs, larvae L3    54 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    31 Caffeine 1.5 mg/ml 4 hrs, larvae L3    38 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    75 Caffeine 25 mg/ml 48 hrs, 4-day adult    24 Paraquat 5 mM 48 hrs, 4-day adult    77 Paraquat 10 mM 48 hrs, 4-day adult    66 Rotenone 2 μg 12 hrs, larvae L3    43 Rotenone 8 μg 12 hrs, larvae L3    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    19 cold shock, 4-day adult    12 heat shock, 4-day adult  (37) Cadmium 50 mM 6 hrs, larvae L3  32 Cadmium 50 mM 12 hrs, larvae L3  (49) Cadmium 50 mM 48 hrs, 4-day adult  (39) Cadmium 100 mM 48 hrs, 4-day adult  (57) Copper 0.5 mM 12 hrs, larvae L3    13 Copper 15 mM 48 hrs, 4-day adult  (98) Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult  (91) Ethanol 2.5% 3 hrs, larvae L3  (54) Ethanol 5% 3 hrs, larvae L3  (45) Ethanol 10% 3 hrs, larvae L3  31 Caffeine 1.5 mg/ml 4 hrs, larvae L3  (38) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (75) Caffeine 25 mg/ml 48 hrs, 4-day adult    24 Paraquat 5 mM 48 hrs, 4-day adult  (77) Paraquat 10 mM 48 hrs, 4-day adult  (66) Rotenone 2 μg 12 hrs, larvae L3  (43) Rotenone 8 μg 12 hrs, larvae L3  29 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    19 cold shock, 4-day adult    12 heat shock, 4-day adult    37 Cadmium 50 mM 6 hrs, larvae L3    32 Cadmium 50 mM 12 hrs, larvae L3    49 Cadmium 50 mM 48 hrs, 4-day adult    39 Cadmium 100 mM 48 hrs, 4-day adult    57 Copper 0.5 mM 12 hrs, larvae L3    13 Copper 15 mM 48 hrs, 4-day adult    98 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    91 Ethanol 2.5% 3 hrs, larvae L3    54 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    31 Caffeine 1.5 mg/ml 4 hrs, larvae L3    38 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    75 Caffeine 25 mg/ml 48 hrs, 4-day adult    24 Paraquat 5 mM 48 hrs, 4-day adult    77 Paraquat 10 mM 48 hrs, 4-day adult    66 Rotenone 2 μg 12 hrs, larvae L3    43 Rotenone 8 μg 12 hrs, larvae L3    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    19 cold shock, 4-day adult    12 heat shock, 4-day adult    37 Cadmium 50 mM 6 hrs, larvae L3    32 Cadmium 50 mM 12 hrs, larvae L3    49 Cadmium 50 mM 48 hrs, 4-day adult    39 Cadmium 100 mM 48 hrs, 4-day adult    57 Copper 0.5 mM 12 hrs, larvae L3    13 Copper 15 mM 48 hrs, 4-day adult    98 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    91 Ethanol 2.5% 3 hrs, larvae L3    54 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    31 Caffeine 1.5 mg/ml 4 hrs, larvae L3    38 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    75 Caffeine 25 mg/ml 48 hrs, 4-day adult    24 Paraquat 5 mM 48 hrs, 4-day adult    77 Paraquat 10 mM 48 hrs, 4-day adult    66 Rotenone 2 μg 12 hrs, larvae L3    43 Rotenone 8 μg 12 hrs, larvae L3    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_21 mE1_20_mRNA_expression_cluster_02
External Data & Images
Linkouts	BDGP expression data • IP14059 LD23846 IP02188 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0038984 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG5315-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal | pupal stage, with Scer\GAL4pnr-MD237 CG5315GD3112 Phenotype manifest in Allele
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of CG5315 Class Mutagen Stocks Known lesion CG5315c02150 piggyBac transposase 1 -- CG5315f05395 piggyBac transposase 1 -- CG5315G6641 P-element activity 1 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG5315 Class Mutagen Stocks Known lesion CG5315GD3112 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG5315NIG.5315R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel6273 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD3112} NA P{NIG.5315R} NA
Insertions
	Type of insertions Name Expression data insertion of enhancer trap P{lacW}l(3)SH127SH127 No miscellaneous insertions PBac{PB}CG5315c02150 NA PBac{WH}CG5315f05395 NA insertion of mobile activating element P{EP}CG5315G6641 NA
Gene Ontology: Function, Process & Cellular Component ( 4 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 4 terms )
Molecular Function
CV term Evidence References
hormone binding inferred from sequence or structural similarity with UniProtKB:Q96A54 (assigned by UniProtKB) (Swiss-Prot Project Members, 2004.3.15)
Biological Process
CV term Evidence References
fatty acid oxidation inferred from sequence or structural similarity with UniProtKB:Q96A54 (assigned by UniProtKB) (Swiss-Prot Project Members, 2004.3.15) hormone-mediated signaling pathway inferred from sequence or structural similarity with UniProtKB:Q96A54 (assigned by UniProtKB) (Swiss-Prot Project Members, 2004.3.15)
Cellular Component
CV term Evidence References
integral to membrane inferred from sequence or structural similarity with UniProtKB:Q96A54 (assigned by UniProtKB) (Swiss-Prot Project Members, 2004.3.15)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
CG5315 - Esp anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG5315 - Men anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG5315 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 67611 DroID - A comprehensive database of gene and protein interactions. • FBgn0038984 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42656
Orthologs
OrthoDB Orthologs (47) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG66WZV7 Dipteran inclusive ortholog search EOG6D7ZF6 Insect inclusive ortholog search EOG6SQVS4 Arthropod inclusive ortholog search EOG6WDBT7 Metazoa inclusive ortholog search EOG6TTVBC
Orthologs in Drosophila Species (EOG66WZV7)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG5315     Drosophila simulans   Dsim\GD18448 Y   Drosophila sechellia   Dsec\GM23638 Y   Drosophila erecta   Dere\GG12506 Y   Drosophila yakuba   Dyak\GE24027 Y   Drosophila ananassae   Dana\GF16147 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA18798 Y   Drosophila persimilis   Dper\GL13682 Y   Drosophila willistoni   Dwil\GK14433 Y   Drosophila virilis   Dvir\GJ24663 Y   Drosophila mojavensis   Dmoj\GI22724 Y   Drosophila grimshawi   Dgri\GH17396 Y
Orthologs in non-Drosophila Dipterans (EOG6D7ZF6)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL014717   Anopheles gambiae Malaria mosquito  Agam\AGAP004486   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ002779
Orthologs in non-Dipteran Insects (EOG6SQVS4)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\LOC550659   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG013710   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH19165   Atta cephalotes Leafcutter ant  Acep\ACEP18105   Camponotus floridanus Florida carpenter ant  Cflo\CFLO18027   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL19706   Linepithema humile Argentine ant  Lhum\LH18563   Pogonomyrmex barbatus Red harvester ant  Pbar\PB21075   Solenopsis invicta Red fire ant  Sinv\SINV15268   Acyrthosiphon pisum Pea aphid  Apim\ACYPI001921   Bombyx mori Silkmoth  Bmor\BGIBMGA009418   Pediculus humanus Human body louse  Phum\PHUM499090   Tribolium castaneum Red flour beetle  Tcas\GLEAN_15429
Orthologs in non-Insect Arthropods (EOG6WDBT7)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\R3hcc1l   Daphnia pulex Water flea  Dpux\JGI_V11_116103   Ixodes scapularis Deer tick  Isca\ISCW018477
Orthologs in non-Arthropod Metazoa (EOG6TTVBC)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\paqr-1   Caenorhabditis elegans Nematode  Cele\paqr-2   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_004548gn   Danio rerio Zebrafish  Drer\adipor2   Danio rerio Zebrafish  Drer\adipor1b   Danio rerio Zebrafish  Drer\adipor1a   Xenopus tropicalis Western clawed frog  Xtro\adipor1   Xenopus tropicalis Western clawed frog  Xtro\adipor2   Gallus gallus Domestic chicken  Ggal\ADIPOR2   Gallus gallus Domestic chicken  Ggal\ADIPOR1   Mus musculus House mouse  Mmus\Adipor2   Mus musculus House mouse  Mmus\Adipor1   Rattus norvegicus Norway rat  Rnor\Adipor2   Rattus norvegicus Norway rat  Rnor\Adipor1   Homo sapiens Human  Hsap\ADIPOR1   Homo sapiens Human  Hsap\ADIPOR2
Human Orthologs (2)
Gene OMIM HGNC Hsap\ADIPOR1     Hsap\ADIPOR2
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD18448 Drosophila sechellia Dsec\GM23638 Drosophila erecta Dere\GG12506 Drosophila yakuba Dyak\GE24027 Drosophila ananassae Dana\GF16147 Drosophila pseudoobscura pseudoobscura Dpse\GA18798 Drosophila persimilis Dper\GL13682 Drosophila willistoni Dwil\GK14433 Drosophila virilis Dvir\GJ24663 Drosophila mojavensis Dmoj\GI22724 Drosophila grimshawi Dgri\GH17396
Stocks & Reagents
Stocks Listed in FlyBase ( 5 )
Bloomington	31800 w1118; P{EP}CG5315G6641/TM6C, Sb1
Harvard	- PBac{PB}CG5315c02150 - PBac{WH}CG5315f05395
VDRC	v40935 w1118; P{GD3112}v40935 v40936 w1118; P{GD3112}v40936/TM3
Genomic Clones ( 2 )
	BACR30J14 BACR48C17 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 163 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD23846
Other clones	IP14059 MIP33713 MIP33813
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT02014 AT03760 AT08563 AT12420 AT19065 AT25287 AT30441 GH02918 GH03212 GH03776 GH04343 GH04801 GH04812 GH05419 GH05884 GH12476 GH12634 GH15017 GH15939 GH18207 GH19392 GH22432 GH24433 GH24445 GH27261 GH27877 HL03771 LD30885 LP12835 RE27684 RE32386 RE35215 RE39237 RE40167 RE53382 RE55207 RH07276 RH07653 RH08724 RH14089 RH14246 RH22146 RH24037 RH25475 RH32176 RH38433 RH39529 RH42768 RH43212 RH44055 RH44996 RH45263 RH45323 RH48732 RH49457 RH49611 RH49896 RH50391 RH50964 RH52265 RH53116 RH56931 RH57835 RH58509 RH63464 RH65716 RH66405 RH71316 RH74719 SD15163 SD17716 SD19616 SD20930 SD27731
Other clones	211 11598 12840 13192 15235 16002 17266 21352 29473 38338 40438 44323 47419 47774 50115 50666 58947 63757 70085 73827 76814 82754 106227 118924 120371 121929 149897 164564 181597 522182 bs61c02 CK01.13C.G6 CK01.67A.H10 CK01.90B.H8 CK01.92C.D1 CK01.108A.F2 CK01.109C.D5 CK01.111D.D11 CK00339 CK01059 Dmel_dig_004328_0609_0489 Dmel_dig_019011_0593_2523 EK036207 EK052663 EK060608 EK070964 EK072304 EK083015 EK092153 EK098915 EK105243 EK105422 EK112133 EK114254 EK114922 EK117502 EK135233 EK137252 EK151121 EK153563 EK159756 EK175460 EK175728 EK176045 EK176663 EK182923 EK188703 EK190829 EK197424 EK203452 EK209744 EK232041 EK240350 EK242046 EK269035 EK286553 EN01522 IP02186 IP02187 IP02188 IP11892 IP14259 IP14359 LD24344 UT01658
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0038984 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42656
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
	The Hrp59 protein binds preferentially to a subset of mRNAs, including CG5315 mRNA. (Kiesler et al., 2005)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_142804 NM_170019 NM_170020 NM_001260310 NM_001275915 RefSeq (Proteins) • NP_651061 NP_732758 NP_732759 NP_001247239 NP_001262844 DDBJ / EMBL / GenBank • AA820298 AAF56016 AAF56017 AAN13909 AAN71242 AFH06557 AGB96224 AI455386 BI621718 BT001487 CZ467723 CZ467724 CZ487957 CZ487958 Entrez Gene - A searchable database of RefSeq genes. • 42656 UniProtKB/Swiss-Prot • Q9VCY8 UniProtKB/TrEMBL • A4V392
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Hly-III-related (IPR004254) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • IP02188 IP14059 LD23846
Linkouts
	BioGRID - A database of protein and genetic interactions • 67611 DroID - A comprehensive database of gene and protein interactions. • FBgn0038984 DRSC - Results from RNAi screens. • FBgn0038984 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0038984 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG5315-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0038984 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42656 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42656 modMine - Data generated by the modENCODE project. • FBgn0038984
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG5315 (Kiesler et al., 2005, Gan et al., 2010, Szafer-Glusman et al., 2008, Japanese National Institute of Genetics, 2012.5.21)
Name Synonym
Secondary FlyBase IDs
References ( 21 )
Generate a list of	All references relating to this gene ( 21 )
List References by type	Research paper  ( 5 ) Supplementary material  ( 5 ) Personal communication to FlyBase  ( 7 ) Stock list  ( 1 ) Protein sequence record  ( 1 ) Website  ( 1 )
Recent research papers ( 2 )
	Krauchunas et al., 2012, Dev. Biol. 370(1): 125--134 Protein phosphorylation changes reveal new candidates in the regulation of egg activation and early embryogenesis in D. melanogaster. [FBrf0219342] Weber et al., 2012, PLoS ONE 7(4): e34745 Genome-Wide Association Analysis of Oxidative Stress Resistance in Drosophila melanogaster. [FBrf0218073] Show all research papers ...