This gene is referred to in FlyBase by the symbol Dmel\CG6937 (FBgn0038989). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: mRNA binding. There is experimental evidence that it is involved in the biological process: neurogenesis. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Nucleotide-binding, alpha-beta plait; RNA recognition motif domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages, during early larval stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system, larval trachea, adult ovary. Comments on Affy2 ProbeSet: ProbeSet 1635058_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG6937. Gene sequence location is 3R:18410508..18411931.
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modENCODE Temporal Expression Data for FBgn0038989
Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages, during early larval stages, in adult female stages.
[download data (TSV)]
Guide to modENCODE expression level colors
No expression (0 - 0)
Extremely low expression (1 - 10)
Very low expression (11 - 100)
Low expression (101 - 400)
Moderate expression (401 - 1400)
Moderately high expression (1401 - 4000)
High expression (4001 - 10000)
Very high expression (10001 - 100000)
Extremely high expression (100001 - 2000000)
Linear, scaled to maximum FBgn0038989 expression level
Developmental Stage
Expression Level
embryo 00-02hr
7643
embryo 02-04hr
2057
embryo 04-06hr
4703
embryo 06-08hr
5786
embryo 08-10hr
5705
embryo 10-12hr
5349
embryo 12-14hr
3434
embryo 14-16hr
1827
embryo 16-18hr
1507
embryo 18-20hr
1393
embryo 20-22hr
3010
embryo 22-24hr
2637
larva L1
5325
larva L2
2993
larva L3 12hr old
1891
larva L3 puffstage 1-2
861
larva L3 puffstage 3-6
1013
larva L3 puffstage 7-9
1261
white prepupae new
1128
white prepupae 12hr
1066
white prepupae 24hr
1100
pupae 2d postWPP
934
pupae 3d postWPP
510
pupae 4d postWPP
644
adult male 01day
480
adult male 05day
569
adult male 30day
466
adult female 01day
2882
adult female 05day
5966
adult female 30day
6070
Expression Level Scale
None
Extremely low
Very low
Low
Moderate
Moderately high
High
Linear, scaled to Very low expression
Developmental Stage
Expression Level
embryo 00-02hr
(7643)
embryo 02-04hr
(2057)
embryo 04-06hr
(4703)
embryo 06-08hr
(5786)
embryo 08-10hr
(5705)
embryo 10-12hr
(5349)
embryo 12-14hr
(3434)
embryo 14-16hr
(1827)
embryo 16-18hr
(1507)
embryo 18-20hr
(1393)
embryo 20-22hr
(3010)
embryo 22-24hr
(2637)
larva L1
(5325)
larva L2
(2993)
larva L3 12hr old
(1891)
larva L3 puffstage 1-2
(861)
larva L3 puffstage 3-6
(1013)
larva L3 puffstage 7-9
(1261)
white prepupae new
(1128)
white prepupae 12hr
(1066)
white prepupae 24hr
(1100)
pupae 2d postWPP
(934)
pupae 3d postWPP
(510)
pupae 4d postWPP
(644)
adult male 01day
(480)
adult male 05day
(569)
adult male 30day
(466)
adult female 01day
(2882)
adult female 05day
(5966)
adult female 30day
(6070)
Expression Level Scale
None
Extremely low
Very low
Low
Linear, scaled to Moderate expression
Developmental Stage
Expression Level
embryo 00-02hr
(7643)
embryo 02-04hr
(2057)
embryo 04-06hr
(4703)
embryo 06-08hr
(5786)
embryo 08-10hr
(5705)
embryo 10-12hr
(5349)
embryo 12-14hr
(3434)
embryo 14-16hr
(1827)
embryo 16-18hr
1507
embryo 18-20hr
1393
embryo 20-22hr
(3010)
embryo 22-24hr
(2637)
larva L1
(5325)
larva L2
(2993)
larva L3 12hr old
(1891)
larva L3 puffstage 1-2
861
larva L3 puffstage 3-6
1013
larva L3 puffstage 7-9
1261
white prepupae new
1128
white prepupae 12hr
1066
white prepupae 24hr
1100
pupae 2d postWPP
934
pupae 3d postWPP
510
pupae 4d postWPP
644
adult male 01day
480
adult male 05day
569
adult male 30day
466
adult female 01day
(2882)
adult female 05day
(5966)
adult female 30day
(6070)
Expression Level Scale
None
Extremely low
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Developmental Stage
Expression Level
embryo 00-02hr
7643
embryo 02-04hr
2057
embryo 04-06hr
4703
embryo 06-08hr
5786
embryo 08-10hr
5705
embryo 10-12hr
5349
embryo 12-14hr
3434
embryo 14-16hr
1827
embryo 16-18hr
1507
embryo 18-20hr
1393
embryo 20-22hr
3010
embryo 22-24hr
2637
larva L1
5325
larva L2
2993
larva L3 12hr old
1891
larva L3 puffstage 1-2
861
larva L3 puffstage 3-6
1013
larva L3 puffstage 7-9
1261
white prepupae new
1128
white prepupae 12hr
1066
white prepupae 24hr
1100
pupae 2d postWPP
934
pupae 3d postWPP
510
pupae 4d postWPP
644
adult male 01day
480
adult male 05day
569
adult male 30day
466
adult female 01day
2882
adult female 05day
5966
adult female 30day
6070
Expression Level Scale
None
Extremely low
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Developmental Stage
Expression Level
embryo 00-02hr
7643
embryo 02-04hr
2057
embryo 04-06hr
4703
embryo 06-08hr
5786
embryo 08-10hr
5705
embryo 10-12hr
5349
embryo 12-14hr
3434
embryo 14-16hr
1827
embryo 16-18hr
1507
embryo 18-20hr
1393
embryo 20-22hr
3010
embryo 22-24hr
2637
larva L1
5325
larva L2
2993
larva L3 12hr old
1891
larva L3 puffstage 1-2
861
larva L3 puffstage 3-6
1013
larva L3 puffstage 7-9
1261
white prepupae new
1128
white prepupae 12hr
1066
white prepupae 24hr
1100
pupae 2d postWPP
934
pupae 3d postWPP
510
pupae 4d postWPP
644
adult male 01day
480
adult male 05day
569
adult male 30day
466
adult female 01day
2882
adult female 05day
5966
adult female 30day
6070
Expression Level Scale
None
Extremely low
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
log, scaled to maximum FBgn0038989 expression level
Developmental Stage
Expression Level
embryo 00-02hr
7643
embryo 02-04hr
2057
embryo 04-06hr
4703
embryo 06-08hr
5786
embryo 08-10hr
5705
embryo 10-12hr
5349
embryo 12-14hr
3434
embryo 14-16hr
1827
embryo 16-18hr
1507
embryo 18-20hr
1393
embryo 20-22hr
3010
embryo 22-24hr
2637
larva L1
5325
larva L2
2993
larva L3 12hr old
1891
larva L3 puffstage 1-2
861
larva L3 puffstage 3-6
1013
larva L3 puffstage 7-9
1261
white prepupae new
1128
white prepupae 12hr
1066
white prepupae 24hr
1100
pupae 2d postWPP
934
pupae 3d postWPP
510
pupae 4d postWPP
644
adult male 01day
480
adult male 05day
569
adult male 30day
466
adult female 01day
2882
adult female 05day
5966
adult female 30day
6070
Expression Level Scale
None
Extremely low
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Very low expression
Developmental Stage
Expression Level
embryo 00-02hr
(7643)
embryo 02-04hr
(2057)
embryo 04-06hr
(4703)
embryo 06-08hr
(5786)
embryo 08-10hr
(5705)
embryo 10-12hr
(5349)
embryo 12-14hr
(3434)
embryo 14-16hr
(1827)
embryo 16-18hr
(1507)
embryo 18-20hr
(1393)
embryo 20-22hr
(3010)
embryo 22-24hr
(2637)
larva L1
(5325)
larva L2
(2993)
larva L3 12hr old
(1891)
larva L3 puffstage 1-2
(861)
larva L3 puffstage 3-6
(1013)
larva L3 puffstage 7-9
(1261)
white prepupae new
(1128)
white prepupae 12hr
(1066)
white prepupae 24hr
(1100)
pupae 2d postWPP
(934)
pupae 3d postWPP
(510)
pupae 4d postWPP
(644)
adult male 01day
(480)
adult male 05day
(569)
adult male 30day
(466)
adult female 01day
(2882)
adult female 05day
(5966)
adult female 30day
(6070)
Expression Level Scale
None
Extremely low
Very low
Low
log, scaled to Moderate expression
Developmental Stage
Expression Level
embryo 00-02hr
(7643)
embryo 02-04hr
2057
embryo 04-06hr
(4703)
embryo 06-08hr
(5786)
embryo 08-10hr
(5705)
embryo 10-12hr
(5349)
embryo 12-14hr
(3434)
embryo 14-16hr
1827
embryo 16-18hr
1507
embryo 18-20hr
1393
embryo 20-22hr
(3010)
embryo 22-24hr
(2637)
larva L1
(5325)
larva L2
(2993)
larva L3 12hr old
1891
larva L3 puffstage 1-2
861
larva L3 puffstage 3-6
1013
larva L3 puffstage 7-9
1261
white prepupae new
1128
white prepupae 12hr
1066
white prepupae 24hr
1100
pupae 2d postWPP
934
pupae 3d postWPP
510
pupae 4d postWPP
644
adult male 01day
480
adult male 05day
569
adult male 30day
466
adult female 01day
(2882)
adult female 05day
(5966)
adult female 30day
(6070)
Expression Level Scale
None
Extremely low
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Developmental Stage
Expression Level
embryo 00-02hr
7643
embryo 02-04hr
2057
embryo 04-06hr
4703
embryo 06-08hr
5786
embryo 08-10hr
5705
embryo 10-12hr
5349
embryo 12-14hr
3434
embryo 14-16hr
1827
embryo 16-18hr
1507
embryo 18-20hr
1393
embryo 20-22hr
3010
embryo 22-24hr
2637
larva L1
5325
larva L2
2993
larva L3 12hr old
1891
larva L3 puffstage 1-2
861
larva L3 puffstage 3-6
1013
larva L3 puffstage 7-9
1261
white prepupae new
1128
white prepupae 12hr
1066
white prepupae 24hr
1100
pupae 2d postWPP
934
pupae 3d postWPP
510
pupae 4d postWPP
644
adult male 01day
480
adult male 05day
569
adult male 30day
466
adult female 01day
2882
adult female 05day
5966
adult female 30day
6070
Expression Level Scale
None
Extremely low
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Developmental Stage
Expression Level
embryo 00-02hr
7643
embryo 02-04hr
2057
embryo 04-06hr
4703
embryo 06-08hr
5786
embryo 08-10hr
5705
embryo 10-12hr
5349
embryo 12-14hr
3434
embryo 14-16hr
1827
embryo 16-18hr
1507
embryo 18-20hr
1393
embryo 20-22hr
3010
embryo 22-24hr
2637
larva L1
5325
larva L2
2993
larva L3 12hr old
1891
larva L3 puffstage 1-2
861
larva L3 puffstage 3-6
1013
larva L3 puffstage 7-9
1261
white prepupae new
1128
white prepupae 12hr
1066
white prepupae 24hr
1100
pupae 2d postWPP
934
pupae 3d postWPP
510
pupae 4d postWPP
644
adult male 01day
480
adult male 05day
569
adult male 30day
466
adult female 01day
2882
adult female 05day
5966
adult female 30day
6070
Expression Level Scale
None
Extremely low
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Developmental Stage
Expression Level
embryo 00-02hr
embryo 02-04hr
embryo 04-06hr
embryo 06-08hr
embryo 08-10hr
embryo 10-12hr
embryo 12-14hr
embryo 14-16hr
embryo 16-18hr
embryo 18-20hr
embryo 20-22hr
embryo 22-24hr
larva L1
larva L2
larva L3 12hr old
larva L3 puffstage 1-2
larva L3 puffstage 3-6
larva L3 puffstage 7-9
white prepupae new
white prepupae 12hr
white prepupae 24hr
pupae 2d postWPP
pupae 3d postWPP
pupae 4d postWPP
adult male 01day
adult male 05day
adult male 30day
adult female 01day
adult female 05day
adult female 30day
FlyAtlas Anatomical Expression Data for FBgn0038989
Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system, larval trachea, adult ovary.
[download data (TSV)]
Guide to FlyAtlas expression level colors
No expression (0 - 9.999)
Low expression (10 - 99.999)
Moderate expression (100 - 499.999)
High level expression (500 - 999.999)
Very high expression (1000 - 25000)
Linear, scaled to maximum FBgn0038989 expression level
Tissue
Expression Level
Larval Central Nervous System
136.3
Larval Midgut
38.4
Larval Hindgut
48.7
Larval Malpighian Tubules
no informative data
Larval Fat Body
no informative data
Larval Salivary Gland
89
Larval Trachea
140.375
Larval Carcass
78.775
Adult Head
27.2
Adult Eye
24.475
Adult Brain
34.4
Adult Thoracic-Abdominal Ganglion
25.9
Adult Crop
31.4
Adult Midgut
45.6
Adult Hindgut
30.9
Adult Malpighian Tubules
no informative data
Adult Fat Body
58.9
Adult Salivary Gland
no informative data
Adult Heart
35.35
Adult VirginFemale Spermatheca
22.7
Adult InseminatedFemale Spermatheca
37.5
Adult Ovary
412.9
Adult Testis
22.2
Adult Male Accessory Gland
98.2
Adult Carcass
no informative data
Expression Level Scale
None
Low
Moderate
Linear, scaled to Moderate expression
Tissue
Expression Level
Larval Central Nervous System
136.3
Larval Midgut
38.4
Larval Hindgut
48.7
Larval Malpighian Tubules
no informative data
Larval Fat Body
no informative data
Larval Salivary Gland
89
Larval Trachea
140.375
Larval Carcass
78.775
Adult Head
27.2
Adult Eye
24.475
Adult Brain
34.4
Adult Thoracic-Abdominal Ganglion
25.9
Adult Crop
31.4
Adult Midgut
45.6
Adult Hindgut
30.9
Adult Malpighian Tubules
no informative data
Adult Fat Body
58.9
Adult Salivary Gland
no informative data
Adult Heart
35.35
Adult VirginFemale Spermatheca
22.7
Adult InseminatedFemale Spermatheca
37.5
Adult Ovary
412.9
Adult Testis
22.2
Adult Male Accessory Gland
98.2
Adult Carcass
no informative data
Expression Level Scale
None
Low
Moderate
High
Linear, scaled to High level expression
Tissue
Expression Level
Larval Central Nervous System
136.3
Larval Midgut
38.4
Larval Hindgut
48.7
Larval Malpighian Tubules
no informative data
Larval Fat Body
no informative data
Larval Salivary Gland
89
Larval Trachea
140.375
Larval Carcass
78.775
Adult Head
27.2
Adult Eye
24.475
Adult Brain
34.4
Adult Thoracic-Abdominal Ganglion
25.9
Adult Crop
31.4
Adult Midgut
45.6
Adult Hindgut
30.9
Adult Malpighian Tubules
no informative data
Adult Fat Body
58.9
Adult Salivary Gland
no informative data
Adult Heart
35.35
Adult VirginFemale Spermatheca
22.7
Adult InseminatedFemale Spermatheca
37.5
Adult Ovary
412.9
Adult Testis
22.2
Adult Male Accessory Gland
98.2
Adult Carcass
no informative data
Expression Level Scale
None
Low
Moderate
High
Very high
Linear, scaled to Very high expression
Tissue
Expression Level
Larval Central Nervous System
136.3
Larval Midgut
38.4
Larval Hindgut
48.7
Larval Malpighian Tubules
no informative data
Larval Fat Body
no informative data
Larval Salivary Gland
89
Larval Trachea
140.375
Larval Carcass
78.775
Adult Head
27.2
Adult Eye
24.475
Adult Brain
34.4
Adult Thoracic-Abdominal Ganglion
25.9
Adult Crop
31.4
Adult Midgut
45.6
Adult Hindgut
30.9
Adult Malpighian Tubules
no informative data
Adult Fat Body
58.9
Adult Salivary Gland
no informative data
Adult Heart
35.35
Adult VirginFemale Spermatheca
22.7
Adult InseminatedFemale Spermatheca
37.5
Adult Ovary
412.9
Adult Testis
22.2
Adult Male Accessory Gland
98.2
Adult Carcass
no informative data
Expression Level Scale
None
Low
Moderate
High
Very high
log, scaled to maximum FBgn0038989 expression level
Tissue
Expression Level
Larval Central Nervous System
136.3
Larval Midgut
38.4
Larval Hindgut
48.7
Larval Malpighian Tubules
no informative data
Larval Fat Body
no informative data
Larval Salivary Gland
89
Larval Trachea
140.375
Larval Carcass
78.775
Adult Head
27.2
Adult Eye
24.475
Adult Brain
34.4
Adult Thoracic-Abdominal Ganglion
25.9
Adult Crop
31.4
Adult Midgut
45.6
Adult Hindgut
30.9
Adult Malpighian Tubules
no informative data
Adult Fat Body
58.9
Adult Salivary Gland
no informative data
Adult Heart
35.35
Adult VirginFemale Spermatheca
22.7
Adult InseminatedFemale Spermatheca
37.5
Adult Ovary
412.9
Adult Testis
22.2
Adult Male Accessory Gland
98.2
Adult Carcass
no informative data
Expression Level Scale
None
Low
Moderate
High
log, scaled to Moderate expression
Tissue
Expression Level
Larval Central Nervous System
136.3
Larval Midgut
38.4
Larval Hindgut
48.7
Larval Malpighian Tubules
no informative data
Larval Fat Body
no informative data
Larval Salivary Gland
89
Larval Trachea
140.375
Larval Carcass
78.775
Adult Head
27.2
Adult Eye
24.475
Adult Brain
34.4
Adult Thoracic-Abdominal Ganglion
25.9
Adult Crop
31.4
Adult Midgut
45.6
Adult Hindgut
30.9
Adult Malpighian Tubules
no informative data
Adult Fat Body
58.9
Adult Salivary Gland
no informative data
Adult Heart
35.35
Adult VirginFemale Spermatheca
22.7
Adult InseminatedFemale Spermatheca
37.5
Adult Ovary
412.9
Adult Testis
22.2
Adult Male Accessory Gland
98.2
Adult Carcass
no informative data
Expression Level Scale
None
Low
Moderate
High
log, scaled to High level expression
Tissue
Expression Level
Larval Central Nervous System
136.3
Larval Midgut
38.4
Larval Hindgut
48.7
Larval Malpighian Tubules
no informative data
Larval Fat Body
no informative data
Larval Salivary Gland
89
Larval Trachea
140.375
Larval Carcass
78.775
Adult Head
27.2
Adult Eye
24.475
Adult Brain
34.4
Adult Thoracic-Abdominal Ganglion
25.9
Adult Crop
31.4
Adult Midgut
45.6
Adult Hindgut
30.9
Adult Malpighian Tubules
no informative data
Adult Fat Body
58.9
Adult Salivary Gland
no informative data
Adult Heart
35.35
Adult VirginFemale Spermatheca
22.7
Adult InseminatedFemale Spermatheca
37.5
Adult Ovary
412.9
Adult Testis
22.2
Adult Male Accessory Gland
98.2
Adult Carcass
no informative data
Expression Level Scale
None
Low
Moderate
High
Very high
log, scaled to Very high expression
Tissue
Expression Level
Larval Central Nervous System
136.3
Larval Midgut
38.4
Larval Hindgut
48.7
Larval Malpighian Tubules
no informative data
Larval Fat Body
no informative data
Larval Salivary Gland
89
Larval Trachea
140.375
Larval Carcass
78.775
Adult Head
27.2
Adult Eye
24.475
Adult Brain
34.4
Adult Thoracic-Abdominal Ganglion
25.9
Adult Crop
31.4
Adult Midgut
45.6
Adult Hindgut
30.9
Adult Malpighian Tubules
no informative data
Adult Fat Body
58.9
Adult Salivary Gland
no informative data
Adult Heart
35.35
Adult VirginFemale Spermatheca
22.7
Adult InseminatedFemale Spermatheca
37.5
Adult Ovary
412.9
Adult Testis
22.2
Adult Male Accessory Gland
98.2
Adult Carcass
no informative data
Expression Level Scale
None
Low
Moderate
High
Very high
Heatmap
Tissue
Expression Level
Larval Central Nervous System
Larval Midgut
Larval Hindgut
Larval Malpighian Tubules
no informative data
Larval Fat Body
no informative data
Larval Salivary Gland
Larval Trachea
Larval Carcass
Adult Head
Adult Eye
Adult Brain
Adult Thoracic-Abdominal Ganglion
Adult Crop
Adult Midgut
Adult Hindgut
Adult Malpighian Tubules
no informative data
Adult Fat Body
Adult Salivary Gland
no informative data
Adult Heart
Adult VirginFemale Spermatheca
Adult InseminatedFemale Spermatheca
Adult Ovary
Adult Testis
Adult Male Accessory Gland
Adult Carcass
no informative data
FlyAtlas Organ/Tissue Expression, larval vs. adult
Please Note FlyBase no
longer curates genomic clone accessions so this list
may not be complete
cDNA Clones ( 23 )
Please Note
This section lists
cDNAs and ESTs that fall within the genomic extent
of the gene model, which may include cDNAs and ESTs
of genes within introns, or of overlapping genes.
Please see GBrowse for alignment of the cDNAs and ESTs
to the gene model.
Identified as a potential component of the hh signalling pathway in a genome-wide RNAi screen. dsRNA made from templates generated with primers directed affects the extent of expression of a hh signaling reporter construct in Clone 8 cells.