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Gene Dmel\RpS19b

General Information
Symbol	Dmel\RpS19b	Species	D. melanogaster
Name	Ribosomal protein S19b	Annotation symbol	CG5338
Feature type	protein_coding_gene	FlyBase ID	FBgn0039129
Gene Model Status	Current	Stock availability	6 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	95C13-95C13	Sequence location	3R:19,758,451..19,759,252 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Ribosomal protein S19b is referred to in FlyBase by the symbol Dmel\RpS19b (CG5338, FBgn0039129). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process: translation. 6 alleles are reported. The phenotype of these alleles is annotated with: mesothoracic tergum. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Ribosomal protein S19e; Ribosomal protein S19e, conserved site; Winged helix-turn-helix transcription repressor DNA-binding domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression. Peak expression observed in adult male stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: larval fat body. Comments on Affy2 ProbeSet: ProbeSet 1634464_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of RpS19b. Gene sequence location is 3R:19758451..19759252.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 95C13-95C13   Limits computationally determined from genome sequence between P{PZ}l(3)0468404684 and P{PZ}Atg600096
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\RpS19b for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.45 Gene model reviewed during 5.47
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) RpS19b-RB FBtr0084519  NM_142938   666   155 RpS19b-RC FBtr0332444  NM_001275962   659   155
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein RpS19b-PB   FBpp0083905   17.4   155   10.89     NP_651195   AAN13960 RpS19b-PC   FBpp0304717   17.4   155   10.89     NP_001262891   AGB96271
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Ribosomal protein S19e, conserved site (IPR018277) Ribosomal protein S19e (IPR001266) Winged helix-turn-helix DNA-binding domain (IPR011991)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014297 AAN13960   AE014297 AGB96271   AY119257 AAM51117   BE977997   BF488366   BI633953   BI639770   BP549278   BP549279   CZ467749
UniProtKB/Swiss-Prot	Q7KS38
UniProtKB/TrEMBL
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: larval fat body. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    10.125 Larval Midgut    5.8 Larval Hindgut    6.6 Larval Malpighian Tubules    8 Larval Fat Body    116.1 Larval Salivary Gland    3.1 Larval Trachea    6.85 Larval Carcass    5.8 Adult Head    3.2 Adult Eye    1.45 Adult Brain    3 Adult Thoracic-Abdominal Ganglion    5 Adult Crop    5.1 Adult Midgut    9.7 Adult Hindgut    7.2 Adult Malpighian Tubules    7.4 Adult Fat Body    2.8 Adult Salivary Gland    11 Adult Heart    3.825 Adult VirginFemale Spermatheca    7.2 Adult InseminatedFemale Spermatheca    7.5 Adult Ovary    6.1 Adult Testis    573.7 Adult Male Accessory Gland    9.3 Adult Carcass    8.4 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    10.125 Larval Midgut    5.8 Larval Hindgut    6.6 Larval Malpighian Tubules    8 Larval Fat Body    116.1 Larval Salivary Gland    3.1 Larval Trachea    6.85 Larval Carcass    5.8 Adult Head    3.2 Adult Eye    1.45 Adult Brain    3 Adult Thoracic-Abdominal Ganglion    5 Adult Crop    5.1 Adult Midgut    9.7 Adult Hindgut    7.2 Adult Malpighian Tubules    7.4 Adult Fat Body    2.8 Adult Salivary Gland    11 Adult Heart    3.825 Adult VirginFemale Spermatheca    7.2 Adult InseminatedFemale Spermatheca    7.5 Adult Ovary    6.1 Adult Testis  (573.7) Adult Male Accessory Gland    9.3 Adult Carcass    8.4 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    10.125 Larval Midgut    5.8 Larval Hindgut    6.6 Larval Malpighian Tubules    8 Larval Fat Body    116.1 Larval Salivary Gland    3.1 Larval Trachea    6.85 Larval Carcass    5.8 Adult Head    3.2 Adult Eye    1.45 Adult Brain    3 Adult Thoracic-Abdominal Ganglion    5 Adult Crop    5.1 Adult Midgut    9.7 Adult Hindgut    7.2 Adult Malpighian Tubules    7.4 Adult Fat Body    2.8 Adult Salivary Gland    11 Adult Heart    3.825 Adult VirginFemale Spermatheca    7.2 Adult InseminatedFemale Spermatheca    7.5 Adult Ovary    6.1 Adult Testis    573.7 Adult Male Accessory Gland    9.3 Adult Carcass    8.4 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    10.125 Larval Midgut    5.8 Larval Hindgut    6.6 Larval Malpighian Tubules    8 Larval Fat Body    116.1 Larval Salivary Gland    3.1 Larval Trachea    6.85 Larval Carcass    5.8 Adult Head    3.2 Adult Eye    1.45 Adult Brain    3 Adult Thoracic-Abdominal Ganglion    5 Adult Crop    5.1 Adult Midgut    9.7 Adult Hindgut    7.2 Adult Malpighian Tubules    7.4 Adult Fat Body    2.8 Adult Salivary Gland    11 Adult Heart    3.825 Adult VirginFemale Spermatheca    7.2 Adult InseminatedFemale Spermatheca    7.5 Adult Ovary    6.1 Adult Testis    573.7 Adult Male Accessory Gland    9.3 Adult Carcass    8.4 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    10.125 Larval Midgut    5.8 Larval Hindgut    6.6 Larval Malpighian Tubules    8 Larval Fat Body    116.1 Larval Salivary Gland    3.1 Larval Trachea    6.85 Larval Carcass    5.8 Adult Head    3.2 Adult Eye    1.45 Adult Brain    3 Adult Thoracic-Abdominal Ganglion    5 Adult Crop    5.1 Adult Midgut    9.7 Adult Hindgut    7.2 Adult Malpighian Tubules    7.4 Adult Fat Body    2.8 Adult Salivary Gland    11 Adult Heart    3.825 Adult VirginFemale Spermatheca    7.2 Adult InseminatedFemale Spermatheca    7.5 Adult Ovary    6.1 Adult Testis    573.7 Adult Male Accessory Gland    9.3 Adult Carcass    8.4 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    10.125 Larval Midgut    5.8 Larval Hindgut    6.6 Larval Malpighian Tubules    8 Larval Fat Body    116.1 Larval Salivary Gland    3.1 Larval Trachea    6.85 Larval Carcass    5.8 Adult Head    3.2 Adult Eye    1.45 Adult Brain    3 Adult Thoracic-Abdominal Ganglion    5 Adult Crop    5.1 Adult Midgut    9.7 Adult Hindgut    7.2 Adult Malpighian Tubules    7.4 Adult Fat Body    2.8 Adult Salivary Gland    11 Adult Heart    3.825 Adult VirginFemale Spermatheca    7.2 Adult InseminatedFemale Spermatheca    7.5 Adult Ovary    6.1 Adult Testis  573.7 Adult Male Accessory Gland    9.3 Adult Carcass    8.4 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    10.125 Larval Midgut    5.8 Larval Hindgut    6.6 Larval Malpighian Tubules    8 Larval Fat Body    116.1 Larval Salivary Gland    3.1 Larval Trachea    6.85 Larval Carcass    5.8 Adult Head    3.2 Adult Eye    1.45 Adult Brain    3 Adult Thoracic-Abdominal Ganglion    5 Adult Crop    5.1 Adult Midgut    9.7 Adult Hindgut    7.2 Adult Malpighian Tubules    7.4 Adult Fat Body    2.8 Adult Salivary Gland    11 Adult Heart    3.825 Adult VirginFemale Spermatheca    7.2 Adult InseminatedFemale Spermatheca    7.5 Adult Ovary    6.1 Adult Testis    573.7 Adult Male Accessory Gland    9.3 Adult Carcass    8.4 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    10.125 Larval Midgut    5.8 Larval Hindgut    6.6 Larval Malpighian Tubules    8 Larval Fat Body    116.1 Larval Salivary Gland    3.1 Larval Trachea    6.85 Larval Carcass    5.8 Adult Head    3.2 Adult Eye    1.45 Adult Brain    3 Adult Thoracic-Abdominal Ganglion    5 Adult Crop    5.1 Adult Midgut    9.7 Adult Hindgut    7.2 Adult Malpighian Tubules    7.4 Adult Fat Body    2.8 Adult Salivary Gland    11 Adult Heart    3.825 Adult VirginFemale Spermatheca    7.2 Adult InseminatedFemale Spermatheca    7.5 Adult Ovary    6.1 Adult Testis    573.7 Adult Male Accessory Gland    9.3 Adult Carcass    8.4 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    3.2   NA  Eye    1.45   NA  Brain    3   no informative data  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    5   NA  Crop    5.1   5.8  Midgut    9.7   6.6  Hindgut    7.2   8  Malpighian Tubules    7.4   116.1  Fat Body    2.8   3.1  Salivary Gland    no informative data   NA  Heart    3.825   6.85  Trachea    NA   NA  VirginFemale Spermatheca    7.2   NA  InseminatedFemale Spermatheca    7.5   NA  Ovary    6.1   NA  Testis    573.7   NA  Male Accessory Gland    9.3   5.8  Carcass    8.4 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    60 central nervous system, larvae L3    4 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    0 digestive system, 4-day adult    0 digestive system, 20-day adult    0 fat body, larvae L3 wandering    0 fat body, white prepupae    7 fat body, pupae P8    14 carcass, larvae L3 wandering    1 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    0 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    159 accessory gland, mated 4-day male    9 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (60) central nervous system, larvae L3    4 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    0 digestive system, 4-day adult    0 digestive system, 20-day adult    0 fat body, larvae L3 wandering    0 fat body, white prepupae    7 fat body, pupae P8    14 carcass, larvae L3 wandering    1 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    0 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male  (159) accessory gland, mated 4-day male    9 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    60 central nervous system, larvae L3    4 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    0 digestive system, 4-day adult    0 digestive system, 20-day adult    0 fat body, larvae L3 wandering    0 fat body, white prepupae    7 fat body, pupae P8    14 carcass, larvae L3 wandering    1 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    0 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male  (159) accessory gland, mated 4-day male    9 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    60 central nervous system, larvae L3    4 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    0 digestive system, 4-day adult    0 digestive system, 20-day adult    0 fat body, larvae L3 wandering    0 fat body, white prepupae    7 fat body, pupae P8    14 carcass, larvae L3 wandering    1 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    0 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    159 accessory gland, mated 4-day male    9 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    60 central nervous system, larvae L3    4 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    0 digestive system, 4-day adult    0 digestive system, 20-day adult    0 fat body, larvae L3 wandering    0 fat body, white prepupae    7 fat body, pupae P8    14 carcass, larvae L3 wandering    1 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    0 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    159 accessory gland, mated 4-day male    9 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (60) central nervous system, larvae L3    4 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    0 digestive system, 4-day adult    0 digestive system, 20-day adult    0 fat body, larvae L3 wandering    0 fat body, white prepupae    7 fat body, pupae P8    14 carcass, larvae L3 wandering    1 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    0 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male  (159) accessory gland, mated 4-day male    9 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    60 central nervous system, larvae L3    4 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    0 digestive system, 4-day adult    0 digestive system, 20-day adult    0 fat body, larvae L3 wandering    0 fat body, white prepupae    7 fat body, pupae P8    14 carcass, larvae L3 wandering    1 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    0 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male  (159) accessory gland, mated 4-day male    9 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    60 central nervous system, larvae L3    4 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    0 digestive system, 4-day adult    0 digestive system, 20-day adult    0 fat body, larvae L3 wandering    0 fat body, white prepupae    7 fat body, pupae P8    14 carcass, larvae L3 wandering    1 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    0 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    159 accessory gland, mated 4-day male    9 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression. Peak expression observed in adult male stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    1 embryo 04-06hr    1 embryo 06-08hr    1 embryo 08-10hr    3 embryo 10-12hr    4 embryo 12-14hr    2 embryo 14-16hr    1 embryo 16-18hr    1 embryo 18-20hr    1 embryo 20-22hr    2 embryo 22-24hr    2 larva L1    2 larva L2    4 larva L3 12hr old    7 larva L3 puffstage 1-2    12 larva L3 puffstage 3-6    15 larva L3 puffstage 7-9    17 white prepupae new    18 white prepupae 12hr    25 white prepupae 24hr    31 pupae 2d postWPP    31 pupae 3d postWPP    22 pupae 4d postWPP    17 adult male 01day    37 adult male 05day    53 adult male 30day    45 adult female 01day    1 adult female 05day    1 adult female 30day    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    1 embryo 04-06hr    1 embryo 06-08hr    1 embryo 08-10hr    3 embryo 10-12hr    4 embryo 12-14hr    2 embryo 14-16hr    1 embryo 16-18hr    1 embryo 18-20hr    1 embryo 20-22hr    2 embryo 22-24hr    2 larva L1    2 larva L2    4 larva L3 12hr old    7 larva L3 puffstage 1-2    12 larva L3 puffstage 3-6    15 larva L3 puffstage 7-9    17 white prepupae new    18 white prepupae 12hr    25 white prepupae 24hr  (31) pupae 2d postWPP  (31) pupae 3d postWPP    22 pupae 4d postWPP    17 adult male 01day  (37) adult male 05day  (53) adult male 30day  (45) adult female 01day    1 adult female 05day    1 adult female 30day    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    1 embryo 04-06hr    1 embryo 06-08hr    1 embryo 08-10hr    3 embryo 10-12hr    4 embryo 12-14hr    2 embryo 14-16hr    1 embryo 16-18hr    1 embryo 18-20hr    1 embryo 20-22hr    2 embryo 22-24hr    2 larva L1    2 larva L2    4 larva L3 12hr old    7 larva L3 puffstage 1-2    12 larva L3 puffstage 3-6    15 larva L3 puffstage 7-9    17 white prepupae new    18 white prepupae 12hr    25 white prepupae 24hr    31 pupae 2d postWPP    31 pupae 3d postWPP    22 pupae 4d postWPP    17 adult male 01day    37 adult male 05day    53 adult male 30day    45 adult female 01day    1 adult female 05day    1 adult female 30day    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    1 embryo 04-06hr    1 embryo 06-08hr    1 embryo 08-10hr    3 embryo 10-12hr    4 embryo 12-14hr    2 embryo 14-16hr    1 embryo 16-18hr    1 embryo 18-20hr    1 embryo 20-22hr    2 embryo 22-24hr    2 larva L1    2 larva L2    4 larva L3 12hr old    7 larva L3 puffstage 1-2    12 larva L3 puffstage 3-6    15 larva L3 puffstage 7-9    17 white prepupae new    18 white prepupae 12hr    25 white prepupae 24hr    31 pupae 2d postWPP    31 pupae 3d postWPP    22 pupae 4d postWPP    17 adult male 01day    37 adult male 05day    53 adult male 30day    45 adult female 01day    1 adult female 05day    1 adult female 30day    1 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    1 embryo 04-06hr    1 embryo 06-08hr    1 embryo 08-10hr    3 embryo 10-12hr    4 embryo 12-14hr    2 embryo 14-16hr    1 embryo 16-18hr    1 embryo 18-20hr    1 embryo 20-22hr    2 embryo 22-24hr    2 larva L1    2 larva L2    4 larva L3 12hr old    7 larva L3 puffstage 1-2    12 larva L3 puffstage 3-6    15 larva L3 puffstage 7-9    17 white prepupae new    18 white prepupae 12hr    25 white prepupae 24hr    31 pupae 2d postWPP    31 pupae 3d postWPP    22 pupae 4d postWPP    17 adult male 01day    37 adult male 05day    53 adult male 30day    45 adult female 01day    1 adult female 05day    1 adult female 30day    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    1 embryo 04-06hr    1 embryo 06-08hr    1 embryo 08-10hr    3 embryo 10-12hr    4 embryo 12-14hr    2 embryo 14-16hr    1 embryo 16-18hr    1 embryo 18-20hr    1 embryo 20-22hr    2 embryo 22-24hr    2 larva L1    2 larva L2    4 larva L3 12hr old    7 larva L3 puffstage 1-2    12 larva L3 puffstage 3-6    15 larva L3 puffstage 7-9    17 white prepupae new    18 white prepupae 12hr    25 white prepupae 24hr  31 pupae 2d postWPP  31 pupae 3d postWPP    22 pupae 4d postWPP    17 adult male 01day  (37) adult male 05day  (53) adult male 30day  (45) adult female 01day    1 adult female 05day    1 adult female 30day    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    1 embryo 04-06hr    1 embryo 06-08hr    1 embryo 08-10hr    3 embryo 10-12hr    4 embryo 12-14hr    2 embryo 14-16hr    1 embryo 16-18hr    1 embryo 18-20hr    1 embryo 20-22hr    2 embryo 22-24hr    2 larva L1    2 larva L2    4 larva L3 12hr old    7 larva L3 puffstage 1-2    12 larva L3 puffstage 3-6    15 larva L3 puffstage 7-9    17 white prepupae new    18 white prepupae 12hr    25 white prepupae 24hr    31 pupae 2d postWPP    31 pupae 3d postWPP    22 pupae 4d postWPP    17 adult male 01day    37 adult male 05day    53 adult male 30day    45 adult female 01day    1 adult female 05day    1 adult female 30day    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    1 embryo 04-06hr    1 embryo 06-08hr    1 embryo 08-10hr    3 embryo 10-12hr    4 embryo 12-14hr    2 embryo 14-16hr    1 embryo 16-18hr    1 embryo 18-20hr    1 embryo 20-22hr    2 embryo 22-24hr    2 larva L1    2 larva L2    4 larva L3 12hr old    7 larva L3 puffstage 1-2    12 larva L3 puffstage 3-6    15 larva L3 puffstage 7-9    17 white prepupae new    18 white prepupae 12hr    25 white prepupae 24hr    31 pupae 2d postWPP    31 pupae 3d postWPP    22 pupae 4d postWPP    17 adult male 01day    37 adult male 05day    53 adult male 30day    45 adult female 01day    1 adult female 05day    1 adult female 30day    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    75 Schneider line 2 Sg4    6 embryonic 1182-4H    2 embryonic GM2    3 embryonic Kc167    40 embryonic S1    16 embryonic S3    3 leg disc CME L1    4 wing disc CME-W2    20 wing disc ML-DmD8    2 wing disc ML-DmD9    5 wing disc ML-DmD16-c3    1 wing disc ML-DmD21    0 wing disc ML-DmD32    5 haltere disc ML-DmD17-c3    1 eye-antennal disc ML-DmD11    4 antennal disc ML-DmD20-c5    4 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    13 CNS ML-DmBG2-c2    2 tumorous blood cells mbn2    4 ovary fGS/OSS    1 ovary OSC    4 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (75) Schneider line 2 Sg4    6 embryonic 1182-4H    2 embryonic GM2    3 embryonic Kc167  (40) embryonic S1    16 embryonic S3    3 leg disc CME L1    4 wing disc CME-W2    20 wing disc ML-DmD8    2 wing disc ML-DmD9    5 wing disc ML-DmD16-c3    1 wing disc ML-DmD21    0 wing disc ML-DmD32    5 haltere disc ML-DmD17-c3    1 eye-antennal disc ML-DmD11    4 antennal disc ML-DmD20-c5    4 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    13 CNS ML-DmBG2-c2    2 tumorous blood cells mbn2    4 ovary fGS/OSS    1 ovary OSC    4 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    75 Schneider line 2 Sg4    6 embryonic 1182-4H    2 embryonic GM2    3 embryonic Kc167    40 embryonic S1    16 embryonic S3    3 leg disc CME L1    4 wing disc CME-W2    20 wing disc ML-DmD8    2 wing disc ML-DmD9    5 wing disc ML-DmD16-c3    1 wing disc ML-DmD21    0 wing disc ML-DmD32    5 haltere disc ML-DmD17-c3    1 eye-antennal disc ML-DmD11    4 antennal disc ML-DmD20-c5    4 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    13 CNS ML-DmBG2-c2    2 tumorous blood cells mbn2    4 ovary fGS/OSS    1 ovary OSC    4 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    75 Schneider line 2 Sg4    6 embryonic 1182-4H    2 embryonic GM2    3 embryonic Kc167    40 embryonic S1    16 embryonic S3    3 leg disc CME L1    4 wing disc CME-W2    20 wing disc ML-DmD8    2 wing disc ML-DmD9    5 wing disc ML-DmD16-c3    1 wing disc ML-DmD21    0 wing disc ML-DmD32    5 haltere disc ML-DmD17-c3    1 eye-antennal disc ML-DmD11    4 antennal disc ML-DmD20-c5    4 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    13 CNS ML-DmBG2-c2    2 tumorous blood cells mbn2    4 ovary fGS/OSS    1 ovary OSC    4 ovary OSS    1 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    75 Schneider line 2 Sg4    6 embryonic 1182-4H    2 embryonic GM2    3 embryonic Kc167    40 embryonic S1    16 embryonic S3    3 leg disc CME L1    4 wing disc CME-W2    20 wing disc ML-DmD8    2 wing disc ML-DmD9    5 wing disc ML-DmD16-c3    1 wing disc ML-DmD21    0 wing disc ML-DmD32    5 haltere disc ML-DmD17-c3    1 eye-antennal disc ML-DmD11    4 antennal disc ML-DmD20-c5    4 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    13 CNS ML-DmBG2-c2    2 tumorous blood cells mbn2    4 ovary fGS/OSS    1 ovary OSC    4 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (75) Schneider line 2 Sg4    6 embryonic 1182-4H    2 embryonic GM2    3 embryonic Kc167  (40) embryonic S1    16 embryonic S3    3 leg disc CME L1    4 wing disc CME-W2    20 wing disc ML-DmD8    2 wing disc ML-DmD9    5 wing disc ML-DmD16-c3    1 wing disc ML-DmD21    0 wing disc ML-DmD32    5 haltere disc ML-DmD17-c3    1 eye-antennal disc ML-DmD11    4 antennal disc ML-DmD20-c5    4 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    13 CNS ML-DmBG2-c2    2 tumorous blood cells mbn2    4 ovary fGS/OSS    1 ovary OSC    4 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    75 Schneider line 2 Sg4    6 embryonic 1182-4H    2 embryonic GM2    3 embryonic Kc167    40 embryonic S1    16 embryonic S3    3 leg disc CME L1    4 wing disc CME-W2    20 wing disc ML-DmD8    2 wing disc ML-DmD9    5 wing disc ML-DmD16-c3    1 wing disc ML-DmD21    0 wing disc ML-DmD32    5 haltere disc ML-DmD17-c3    1 eye-antennal disc ML-DmD11    4 antennal disc ML-DmD20-c5    4 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    13 CNS ML-DmBG2-c2    2 tumorous blood cells mbn2    4 ovary fGS/OSS    1 ovary OSC    4 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    75 Schneider line 2 Sg4    6 embryonic 1182-4H    2 embryonic GM2    3 embryonic Kc167    40 embryonic S1    16 embryonic S3    3 leg disc CME L1    4 wing disc CME-W2    20 wing disc ML-DmD8    2 wing disc ML-DmD9    5 wing disc ML-DmD16-c3    1 wing disc ML-DmD21    0 wing disc ML-DmD32    5 haltere disc ML-DmD17-c3    1 eye-antennal disc ML-DmD11    4 antennal disc ML-DmD20-c5    4 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    13 CNS ML-DmBG2-c2    2 tumorous blood cells mbn2    4 ovary fGS/OSS    1 ovary OSC    4 ovary OSS    1 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    1 cold shock, 4-day adult    1 heat shock, 4-day adult    5 Cadmium 50 mM 6 hrs, larvae L3    9 Cadmium 50 mM 12 hrs, larvae L3    9 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    3 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    2 Zinc 5 mM 12 hrs, larvae L3    1 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    5 Ethanol 5% 3 hrs, larvae L3    6 Ethanol 10% 3 hrs, larvae L3    5 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    1 Caffeine 25 mg/ml 48 hrs, 4-day adult    0 Paraquat 5 mM 48 hrs, 4-day adult    6 Paraquat 10 mM 48 hrs, 4-day adult    6 Rotenone 2 μg 12 hrs, larvae L3    8 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    1 cold shock, 4-day adult    1 heat shock, 4-day adult    5 Cadmium 50 mM 6 hrs, larvae L3    9 Cadmium 50 mM 12 hrs, larvae L3    9 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    3 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    2 Zinc 5 mM 12 hrs, larvae L3    1 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    5 Ethanol 5% 3 hrs, larvae L3    6 Ethanol 10% 3 hrs, larvae L3    5 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    1 Caffeine 25 mg/ml 48 hrs, 4-day adult    0 Paraquat 5 mM 48 hrs, 4-day adult    6 Paraquat 10 mM 48 hrs, 4-day adult    6 Rotenone 2 μg 12 hrs, larvae L3    8 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    1 cold shock, 4-day adult    1 heat shock, 4-day adult    5 Cadmium 50 mM 6 hrs, larvae L3    9 Cadmium 50 mM 12 hrs, larvae L3    9 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    3 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    2 Zinc 5 mM 12 hrs, larvae L3    1 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    5 Ethanol 5% 3 hrs, larvae L3    6 Ethanol 10% 3 hrs, larvae L3    5 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    1 Caffeine 25 mg/ml 48 hrs, 4-day adult    0 Paraquat 5 mM 48 hrs, 4-day adult    6 Paraquat 10 mM 48 hrs, 4-day adult    6 Rotenone 2 μg 12 hrs, larvae L3    8 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    1 cold shock, 4-day adult    1 heat shock, 4-day adult    5 Cadmium 50 mM 6 hrs, larvae L3    9 Cadmium 50 mM 12 hrs, larvae L3    9 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    3 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    2 Zinc 5 mM 12 hrs, larvae L3    1 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    5 Ethanol 5% 3 hrs, larvae L3    6 Ethanol 10% 3 hrs, larvae L3    5 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    1 Caffeine 25 mg/ml 48 hrs, 4-day adult    0 Paraquat 5 mM 48 hrs, 4-day adult    6 Paraquat 10 mM 48 hrs, 4-day adult    6 Rotenone 2 μg 12 hrs, larvae L3    8 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    1 cold shock, 4-day adult    1 heat shock, 4-day adult    5 Cadmium 50 mM 6 hrs, larvae L3    9 Cadmium 50 mM 12 hrs, larvae L3    9 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    3 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    2 Zinc 5 mM 12 hrs, larvae L3    1 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    5 Ethanol 5% 3 hrs, larvae L3    6 Ethanol 10% 3 hrs, larvae L3    5 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    1 Caffeine 25 mg/ml 48 hrs, 4-day adult    0 Paraquat 5 mM 48 hrs, 4-day adult    6 Paraquat 10 mM 48 hrs, 4-day adult    6 Rotenone 2 μg 12 hrs, larvae L3    8 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    1 cold shock, 4-day adult    1 heat shock, 4-day adult    5 Cadmium 50 mM 6 hrs, larvae L3    9 Cadmium 50 mM 12 hrs, larvae L3    9 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    3 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    2 Zinc 5 mM 12 hrs, larvae L3    1 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    5 Ethanol 5% 3 hrs, larvae L3    6 Ethanol 10% 3 hrs, larvae L3    5 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    1 Caffeine 25 mg/ml 48 hrs, 4-day adult    0 Paraquat 5 mM 48 hrs, 4-day adult    6 Paraquat 10 mM 48 hrs, 4-day adult    6 Rotenone 2 μg 12 hrs, larvae L3    8 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    1 cold shock, 4-day adult    1 heat shock, 4-day adult    5 Cadmium 50 mM 6 hrs, larvae L3    9 Cadmium 50 mM 12 hrs, larvae L3    9 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    3 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    2 Zinc 5 mM 12 hrs, larvae L3    1 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    5 Ethanol 5% 3 hrs, larvae L3    6 Ethanol 10% 3 hrs, larvae L3    5 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    1 Caffeine 25 mg/ml 48 hrs, 4-day adult    0 Paraquat 5 mM 48 hrs, 4-day adult    6 Paraquat 10 mM 48 hrs, 4-day adult    6 Rotenone 2 μg 12 hrs, larvae L3    8 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    1 cold shock, 4-day adult    1 heat shock, 4-day adult    5 Cadmium 50 mM 6 hrs, larvae L3    9 Cadmium 50 mM 12 hrs, larvae L3    9 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    3 Copper 0.5 mM 12 hrs, larvae L3    5 Copper 15 mM 48 hrs, 4-day adult    2 Zinc 5 mM 12 hrs, larvae L3    1 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    5 Ethanol 5% 3 hrs, larvae L3    6 Ethanol 10% 3 hrs, larvae L3    5 Caffeine 1.5 mg/ml 4 hrs, larvae L3    5 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    1 Caffeine 25 mg/ml 48 hrs, 4-day adult    0 Paraquat 5 mM 48 hrs, 4-day adult    6 Paraquat 10 mM 48 hrs, 4-day adult    6 Rotenone 2 μg 12 hrs, larvae L3    8 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_28
External Data & Images
Linkouts	BDGP expression data • SD22440 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039129 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG5338-RB
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele partially lethal - majority die | pupal stage, with Scer\GAL4pnr-MD237 RpS19bGD11613 Other Phenotypes Allele visible, with Scer\GAL4pnr-MD237 RpS19bGD11613 Phenotype manifest in Allele mesothoracic tergum, with Scer\GAL4pnr-MD237 RpS19bGD11613
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of RpS19b Class Mutagen Stocks Known lesion RpS19bc02184 piggyBac transposase 1 -- RpS19bEY00801 1 -- RpS19bEP3448 P-element activity 0 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of RpS19b Class Mutagen Stocks Known lesion RpS19bGD11613 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes RpS19bGL01233 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes RpS19bKK111007 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel6196 (Ryder, 2004.4.26) Df(3R)Exel9014 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD11613} NA P{KK111007} NA P{TRiP.GL01233} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EP}RpS19bEP3448 NA P{EPgy2}EY00316 NA P{EPgy2}RpS19bEY00801 NA miscellaneous insertions PBac{PB}RpS19bc02184 NA
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
structural constituent of ribosome inferred from sequence or structural similarity with Saccharomyces RPS19A (FlyBase, 1992-)
Biological Process
CV term Evidence References
translation inferred from sequence or structural similarity with Saccharomyces RPS19A (FlyBase, 1992-)
Cellular Component
CV term Evidence References
cytosolic small ribosomal subunit inferred from sequence or structural similarity with Saccharomyces RPS19A (FlyBase, 1992-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
RpS19b - CG10103 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CG1092 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CG11306 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CG11594 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CG15220 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CG15345 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CG17273 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CG17562 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CG1785 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CG3734 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CG4415 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CG7137 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CG7239 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CG7888 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CG8289 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CG8336 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CG8671 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CG9394 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CR18854 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - Cchl anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - Chi anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - CrebA anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - Gen anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - Golgin84 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - Hsp60C anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - Mob4 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - Obp44a anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - Pka-R1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - Prosβ4 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - Ran anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - Rbp1-like anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - Rca1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - RfC3 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - Stat92E anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - Timp anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - Traf4 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - U4-U6-60K experimental knowledge based (Guruharsha et al., 2011) RpS19b - Ugt86De anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - al anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - ap anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - ct anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - dgt4 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - dpn anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - frc anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - mab-21 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - msl-3 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - nuf anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - orb anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - ppa anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - qua anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - sina anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - tan anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) RpS19b - twin anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions RpS19b allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 67766 DroID - A comprehensive database of gene and protein interactions. • FBgn0039129 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42830
Orthologs
OrthoDB Orthologs (51) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6F7P5K Dipteran inclusive ortholog search EOG612MFQ Insect inclusive ortholog search EOG6X3FXQ Arthropod inclusive ortholog search EOG695X84 Metazoa inclusive ortholog search EOG6HB9F9
Orthologs in Drosophila Species (EOG6F7P5K)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\RpS19b     Drosophila simulans   Dsim\GD18336 Y   Drosophila sechellia   Dsec\GM23526 Y   Drosophila erecta   Dere\GG12389 Y   Drosophila yakuba   Dyak\GE10844 Y   Drosophila ananassae   Dana\GF17022 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA18813 Y   Drosophila persimilis   Dper\GL24165 Y
Orthologs in non-Drosophila Dipterans (EOG612MFQ)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL010756 Y Anopheles gambiae Malaria mosquito  Agam\AGAP010933 Y Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ004482 Y
Orthologs in non-Dipteran Insects (EOG6X3FXQ)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\LOC410024 Y Apis mellifera Western honey bee  Amel\LOC410024 Y Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG002462 Y Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH10806 Y Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH17664 Y Atta cephalotes Leafcutter ant  Acep\ACEP10372 Y Atta cephalotes Leafcutter ant  Acep\ACEP13496 Y Camponotus floridanus Florida carpenter ant  Cflo\CFLO15219 Y Camponotus floridanus Florida carpenter ant  Cflo\CFLO21954 Y Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL12873 Y Linepithema humile Argentine ant  Lhum\LH22469 Y Pogonomyrmex barbatus Red harvester ant  Pbar\PB20534 Y Pogonomyrmex barbatus Red harvester ant  Pbar\PB20539 Y Solenopsis invicta Red fire ant  Sinv\SINV19713 Y Acyrthosiphon pisum Pea aphid  Apim\ACYPI001643 Y Pediculus humanus Human body louse  Phum\PHUM569580 Y Tribolium castaneum Red flour beetle  Tcas\GLEAN_07818-OG22665 Y
Orthologs in non-Insect Arthropods (EOG695X84)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\JGI_V11_231884 Y Ixodes scapularis Deer tick  Isca\ISCW020743 Y
Orthologs in non-Arthropod Metazoa (EOG6HB9F9)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\rps-19 Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_006487gn Y Danio rerio Zebrafish  Drer\rps19 Y Xenopus tropicalis Western clawed frog  Xtro\rps19 Y Mus musculus House mouse  Mmus\Rps19 Y Mus musculus House mouse  Mmus\Rps19-ps1 Y Mus musculus House mouse  Mmus\Rps19-ps13 Y Mus musculus House mouse  Mmus\Rps19-ps4 Y Mus musculus House mouse  Mmus\Rps19-ps1 Y Rattus norvegicus Norway rat  Rnor\ENSRNOG00000013292 Y Rattus norvegicus Norway rat  Rnor\LOC100362339 Y Rattus norvegicus Norway rat  Rnor\ENSRNOG00000003303 Y Rattus norvegicus Norway rat  Rnor\LOC688899 Y Rattus norvegicus Norway rat  Rnor\ENSRNOG00000005430 Y Rattus norvegicus Norway rat  Rnor\RGD1559724 Y Rattus norvegicus Norway rat  Rnor\LOC100361732 Y Rattus norvegicus Norway rat  Rnor\LOC100360843 Y Rattus norvegicus Norway rat  Rnor\Rps19 Y Rattus norvegicus Norway rat  Rnor\RGD1562153 Y Rattus norvegicus Norway rat  Rnor\ENSRNOG00000033146 Y Homo sapiens Human  Hsap\RPS19 Y
Human Orthologs (1)
Gene OMIM HGNC Hsap\RPS19
AAA Orthologs (8) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD18336 Drosophila sechellia Dsec\GM23526 Drosophila erecta Dere\GG12389 Drosophila yakuba Dyak\GE10844 Drosophila ananassae Dana\GF17022 Drosophila pseudoobscura pseudoobscura Dpse\GA18813 Drosophila persimilis Dper\GL24165 Drosophila willistoni Dwil\GK22513
Stocks & Reagents
Stocks Listed in FlyBase ( 6 )
Bloomington	41651 y1 v1; P{TRiP.GL01233}attP2 15043 y1 w67c23; P{EPgy2}RpS19bEY00801
Harvard	- PBac{PB}RpS19bc02184
VDRC	v102171 P{KK111007}VIE-260B v22074 w1118 P{GD11613}v22074 v22073 w1118; P{GD11613}v22073/CyO
Genomic Clones ( 2 )
	BACR05C11 BACR15J11 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 5 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	SD22440
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	SD28170
Other clones	AT23620 bs72a07 FGM004F07
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0039129 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42830
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG5338 BcDNA:SD22440 (FlyBase, 1996-)
Additional comments	Source for merge of CG5338 BcDNA:SD22440 was a shared cDNA (date:030728). (FlyBase, 1996-)
Other Comments
	Not a Minute gene. (Marygold et al., 2007) Deletions removing RpS19b but no other cytoplasmic ribosomal protein-encoding genes do not show Minute phenotypes. (Marygold et al., 2007) Expression is enriched in embryonic gonads. (Shigenobu et al., 2006)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_142938 NM_001275962 RefSeq (Proteins) • NP_651195 NP_001262891 DDBJ / EMBL / GenBank • AAM51117 AAN13960 AGB96271 AY119257 BI639770 CZ467749 Entrez Gene - A searchable database of RefSeq genes. • 42830 UniProtKB/Swiss-Prot • Q7KS38
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Ribosomal protein S19e, conserved site (IPR018277) Ribosomal protein S19e (IPR001266) Winged helix-turn-helix DNA-binding domain (IPR011991) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • SD22440
Linkouts
	BioGRID - A database of protein and genetic interactions • 67766 DroID - A comprehensive database of gene and protein interactions. • FBgn0039129 DRSC - Results from RNAi screens. • FBgn0039129 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039129 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG5338-RB FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0039129 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42830 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42830 modMine - Data generated by the modENCODE project. • FBgn0039129
Synonyms & Secondary IDs ( 6 )
Reported As
Symbol Synonym	BcDNA:SD22440   CG5338 (Kai et al., 2005, Keleman et al., 2009.8.5, Marygold et al., 2007, Ni et al., 2010.12.1) RpS19 (McDermott et al., 2012) RpS19b (Shigenobu et al., 2006, Marygold et al., 2007, Lin et al., 2011, Tokusumi et al., 2012)
Name Synonym	Ribosomal protein S19 (Ahrens et al., 2007) Ribosomal protein S19b (Ashburner and Marygold, 2004.7.2)
Secondary FlyBase IDs
	FBgn0062857
References ( 25 )
Generate a list of	All references relating to this gene ( 25 )
List References by type	Research paper  ( 6 ) Supplementary material  ( 4 ) Review  ( 1 ) Personal communication to FlyBase  ( 9 ) FlyBase analysis  ( 3 ) Curated genome annotation  ( 2 )
Recent research papers ( 3 )
	McDermott et al., 2012, Biol. Open 1(5): 488--497 Drosophila Syncrip binds the gurken mRNA localisation signal and regulates localised transcripts during axis specification. [FBrf0218722] Tokusumi et al., 2012, PLoS ONE 7(7): e41604 Gene regulatory networks controlling hematopoietic progenitor niche cell production and differentiation in the Drosophila lymph gland. [FBrf0219204] Lin et al., 2011, PLoS Genet. 7(12): e1002408 Drosophila Ribosomal Protein Mutants Control Tissue Growth Non-Autonomously via Effects on the Prothoracic Gland and Ecdysone. [FBrf0217066] Show all research papers ...
Recent reviews (0)
	All reviews listed in FlyBase were published before 2011 Show reviews ...