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Gene Dmel\CG5510

General Information
Symbol	Dmel\CG5510	Species	D. melanogaster
Name		Annotation symbol	CG5510
Feature type	protein_coding_gene	FlyBase ID	FBgn0039160
Gene Model Status	Current	Stock availability	2 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	95E6-95E6	Sequence location	3R:19,993,395..19,995,283 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG5510 (FBgn0039160). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Concanavalin A-like lectin/glucanase; Concanavalin A-like lectin/glucanase, subgroup; Legume-like lectin. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1626811_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG5510. Gene sequence location is 3R:19993395..19995283.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features HFA15823 BKN27583
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 95E6-95E6   Limits computationally determined from genome sequence between P{PZ}Syx1A06737&P{PZ}Syx1A10660 and P{PZ}crb07207&P{PZ}BRWD305842
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG5510 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG5510-RA FBtr0084576  NM_142967   1363   329
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG5510-PA   FBpp0083961   37.6   329   6.87     NP_651224   AAF56250
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Legume-like lectin (IPR005052) Concanavalin A-like lectin/glucanase (IPR008985) Concanavalin A-like lectin/glucanase, subgroup (IPR013320)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA202282   AA941365   AE014297 AAF56250   AI455037   AI512498   AI541858   AY113492 AAM29497   BI141811   BI353295   BI364849   BI369928   BI610721   BI612571   BI626811   BI640946   BI641526   BP555928   CA807117   CO185185   CO195931   CO294397   CO317794   CO317907   EC227084   EC236042   EV579518   EV583431   EV590917   GH748030   GH754574   GH756559   GH759743   GH760057   GH772949   GH775228   GH778192   GH784347   GH799930   GH819399   GH828083   GH829003   GH829251   GH831858   GH834849   GH835822   GH836898   GH838670   GH854367   GH859623   GH861589   GH866474   GH875050   GH875648   GH877816   GH878476   GH883869   GH886567   GH887862   GH891337   GH894559   GH903517   GH917072   GH919566   GH920636   GH926188   GH937355
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VCC2
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0039160    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0039160 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0039160 expression level Developmental Stage   Expression Level embryo 00-02hr    7618 embryo 02-04hr    11726 embryo 04-06hr    10980 embryo 06-08hr    7011 embryo 08-10hr    6631 embryo 10-12hr    6734 embryo 12-14hr    3725 embryo 14-16hr    4387 embryo 16-18hr    2794 embryo 18-20hr    1483 embryo 20-22hr    1182 embryo 22-24hr    1255 larva L1    1623 larva L2    2727 larva L3 12hr old    2059 larva L3 puffstage 1-2    2461 larva L3 puffstage 3-6    3279 larva L3 puffstage 7-9    5080 white prepupae new    5842 white prepupae 12hr    2715 white prepupae 24hr    3763 pupae 2d postWPP    3101 pupae 3d postWPP    1949 pupae 4d postWPP    2010 adult male 01day    2734 adult male 05day    3413 adult male 30day    3432 adult female 01day    3117 adult female 05day    4149 adult female 30day    4148 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (7618) embryo 02-04hr  (11726) embryo 04-06hr  (10980) embryo 06-08hr  (7011) embryo 08-10hr  (6631) embryo 10-12hr  (6734) embryo 12-14hr  (3725) embryo 14-16hr  (4387) embryo 16-18hr  (2794) embryo 18-20hr  (1483) embryo 20-22hr  (1182) embryo 22-24hr  (1255) larva L1  (1623) larva L2  (2727) larva L3 12hr old  (2059) larva L3 puffstage 1-2  (2461) larva L3 puffstage 3-6  (3279) larva L3 puffstage 7-9  (5080) white prepupae new  (5842) white prepupae 12hr  (2715) white prepupae 24hr  (3763) pupae 2d postWPP  (3101) pupae 3d postWPP  (1949) pupae 4d postWPP  (2010) adult male 01day  (2734) adult male 05day  (3413) adult male 30day  (3432) adult female 01day  (3117) adult female 05day  (4149) adult female 30day  (4148) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (7618) embryo 02-04hr  (11726) embryo 04-06hr  (10980) embryo 06-08hr  (7011) embryo 08-10hr  (6631) embryo 10-12hr  (6734) embryo 12-14hr  (3725) embryo 14-16hr  (4387) embryo 16-18hr  (2794) embryo 18-20hr  1483 embryo 20-22hr    1182 embryo 22-24hr    1255 larva L1  (1623) larva L2  (2727) larva L3 12hr old  (2059) larva L3 puffstage 1-2  (2461) larva L3 puffstage 3-6  (3279) larva L3 puffstage 7-9  (5080) white prepupae new  (5842) white prepupae 12hr  (2715) white prepupae 24hr  (3763) pupae 2d postWPP  (3101) pupae 3d postWPP  (1949) pupae 4d postWPP  (2010) adult male 01day  (2734) adult male 05day  (3413) adult male 30day  (3432) adult female 01day  (3117) adult female 05day  (4149) adult female 30day  (4148) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    7618 embryo 02-04hr  (11726) embryo 04-06hr  (10980) embryo 06-08hr    7011 embryo 08-10hr    6631 embryo 10-12hr    6734 embryo 12-14hr    3725 embryo 14-16hr    4387 embryo 16-18hr    2794 embryo 18-20hr    1483 embryo 20-22hr    1182 embryo 22-24hr    1255 larva L1    1623 larva L2    2727 larva L3 12hr old    2059 larva L3 puffstage 1-2    2461 larva L3 puffstage 3-6    3279 larva L3 puffstage 7-9    5080 white prepupae new    5842 white prepupae 12hr    2715 white prepupae 24hr    3763 pupae 2d postWPP    3101 pupae 3d postWPP    1949 pupae 4d postWPP    2010 adult male 01day    2734 adult male 05day    3413 adult male 30day    3432 adult female 01day    3117 adult female 05day    4149 adult female 30day    4148 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    7618 embryo 02-04hr    11726 embryo 04-06hr    10980 embryo 06-08hr    7011 embryo 08-10hr    6631 embryo 10-12hr    6734 embryo 12-14hr    3725 embryo 14-16hr    4387 embryo 16-18hr    2794 embryo 18-20hr    1483 embryo 20-22hr    1182 embryo 22-24hr    1255 larva L1    1623 larva L2    2727 larva L3 12hr old    2059 larva L3 puffstage 1-2    2461 larva L3 puffstage 3-6    3279 larva L3 puffstage 7-9    5080 white prepupae new    5842 white prepupae 12hr    2715 white prepupae 24hr    3763 pupae 2d postWPP    3101 pupae 3d postWPP    1949 pupae 4d postWPP    2010 adult male 01day    2734 adult male 05day    3413 adult male 30day    3432 adult female 01day    3117 adult female 05day    4149 adult female 30day    4148 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0039160 expression level Developmental Stage   Expression Level embryo 00-02hr    7618 embryo 02-04hr    11726 embryo 04-06hr    10980 embryo 06-08hr    7011 embryo 08-10hr    6631 embryo 10-12hr    6734 embryo 12-14hr    3725 embryo 14-16hr    4387 embryo 16-18hr    2794 embryo 18-20hr    1483 embryo 20-22hr    1182 embryo 22-24hr    1255 larva L1    1623 larva L2    2727 larva L3 12hr old    2059 larva L3 puffstage 1-2    2461 larva L3 puffstage 3-6    3279 larva L3 puffstage 7-9    5080 white prepupae new    5842 white prepupae 12hr    2715 white prepupae 24hr    3763 pupae 2d postWPP    3101 pupae 3d postWPP    1949 pupae 4d postWPP    2010 adult male 01day    2734 adult male 05day    3413 adult male 30day    3432 adult female 01day    3117 adult female 05day    4149 adult female 30day    4148 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (7618) embryo 02-04hr  (11726) embryo 04-06hr  (10980) embryo 06-08hr  (7011) embryo 08-10hr  (6631) embryo 10-12hr  (6734) embryo 12-14hr  (3725) embryo 14-16hr  (4387) embryo 16-18hr  (2794) embryo 18-20hr  (1483) embryo 20-22hr  (1182) embryo 22-24hr  (1255) larva L1  (1623) larva L2  (2727) larva L3 12hr old  (2059) larva L3 puffstage 1-2  (2461) larva L3 puffstage 3-6  (3279) larva L3 puffstage 7-9  (5080) white prepupae new  (5842) white prepupae 12hr  (2715) white prepupae 24hr  (3763) pupae 2d postWPP  (3101) pupae 3d postWPP  (1949) pupae 4d postWPP  (2010) adult male 01day  (2734) adult male 05day  (3413) adult male 30day  (3432) adult female 01day  (3117) adult female 05day  (4149) adult female 30day  (4148) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (7618) embryo 02-04hr  (11726) embryo 04-06hr  (10980) embryo 06-08hr  (7011) embryo 08-10hr  (6631) embryo 10-12hr  (6734) embryo 12-14hr  (3725) embryo 14-16hr  (4387) embryo 16-18hr  (2794) embryo 18-20hr  1483 embryo 20-22hr    1182 embryo 22-24hr    1255 larva L1  1623 larva L2  (2727) larva L3 12hr old  2059 larva L3 puffstage 1-2  2461 larva L3 puffstage 3-6  (3279) larva L3 puffstage 7-9  (5080) white prepupae new  (5842) white prepupae 12hr  (2715) white prepupae 24hr  (3763) pupae 2d postWPP  (3101) pupae 3d postWPP  1949 pupae 4d postWPP  2010 adult male 01day  (2734) adult male 05day  (3413) adult male 30day  (3432) adult female 01day  (3117) adult female 05day  (4149) adult female 30day  (4148) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    7618 embryo 02-04hr  11726 embryo 04-06hr  10980 embryo 06-08hr    7011 embryo 08-10hr    6631 embryo 10-12hr    6734 embryo 12-14hr    3725 embryo 14-16hr    4387 embryo 16-18hr    2794 embryo 18-20hr    1483 embryo 20-22hr    1182 embryo 22-24hr    1255 larva L1    1623 larva L2    2727 larva L3 12hr old    2059 larva L3 puffstage 1-2    2461 larva L3 puffstage 3-6    3279 larva L3 puffstage 7-9    5080 white prepupae new    5842 white prepupae 12hr    2715 white prepupae 24hr    3763 pupae 2d postWPP    3101 pupae 3d postWPP    1949 pupae 4d postWPP    2010 adult male 01day    2734 adult male 05day    3413 adult male 30day    3432 adult female 01day    3117 adult female 05day    4149 adult female 30day    4148 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    7618 embryo 02-04hr    11726 embryo 04-06hr    10980 embryo 06-08hr    7011 embryo 08-10hr    6631 embryo 10-12hr    6734 embryo 12-14hr    3725 embryo 14-16hr    4387 embryo 16-18hr    2794 embryo 18-20hr    1483 embryo 20-22hr    1182 embryo 22-24hr    1255 larva L1    1623 larva L2    2727 larva L3 12hr old    2059 larva L3 puffstage 1-2    2461 larva L3 puffstage 3-6    3279 larva L3 puffstage 7-9    5080 white prepupae new    5842 white prepupae 12hr    2715 white prepupae 24hr    3763 pupae 2d postWPP    3101 pupae 3d postWPP    1949 pupae 4d postWPP    2010 adult male 01day    2734 adult male 05day    3413 adult male 30day    3432 adult female 01day    3117 adult female 05day    4149 adult female 30day    4148 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0039160    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0039160 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0039160 expression level Tissue   Expression Level Larval Central Nervous System    353.25 Larval Midgut    372.4 Larval Hindgut    316.4 Larval Malpighian Tubules    212 Larval Fat Body    336.8 Larval Salivary Gland    451.8 Larval Trachea    375.725 Larval Carcass    516.425 Adult Head    183.3 Adult Eye    238.775 Adult Brain    209.8 Adult Thoracic-Abdominal Ganglion    167.5 Adult Crop    289.4 Adult Midgut    334.4 Adult Hindgut    263 Adult Malpighian Tubules    75.7 Adult Fat Body    322 Adult Salivary Gland    170.8 Adult Heart    292.8 Adult VirginFemale Spermatheca    137.7 Adult InseminatedFemale Spermatheca    161.7 Adult Ovary    369.6 Adult Testis    371.6 Adult Male Accessory Gland    342.3 Adult Carcass    227.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    353.25 Larval Midgut    372.4 Larval Hindgut    316.4 Larval Malpighian Tubules    212 Larval Fat Body    336.8 Larval Salivary Gland    451.8 Larval Trachea    375.725 Larval Carcass  516.425 Adult Head    183.3 Adult Eye    238.775 Adult Brain    209.8 Adult Thoracic-Abdominal Ganglion    167.5 Adult Crop    289.4 Adult Midgut    334.4 Adult Hindgut    263 Adult Malpighian Tubules    75.7 Adult Fat Body    322 Adult Salivary Gland    170.8 Adult Heart    292.8 Adult VirginFemale Spermatheca    137.7 Adult InseminatedFemale Spermatheca    161.7 Adult Ovary    369.6 Adult Testis    371.6 Adult Male Accessory Gland    342.3 Adult Carcass    227.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    353.25 Larval Midgut    372.4 Larval Hindgut    316.4 Larval Malpighian Tubules    212 Larval Fat Body    336.8 Larval Salivary Gland    451.8 Larval Trachea    375.725 Larval Carcass    516.425 Adult Head    183.3 Adult Eye    238.775 Adult Brain    209.8 Adult Thoracic-Abdominal Ganglion    167.5 Adult Crop    289.4 Adult Midgut    334.4 Adult Hindgut    263 Adult Malpighian Tubules    75.7 Adult Fat Body    322 Adult Salivary Gland    170.8 Adult Heart    292.8 Adult VirginFemale Spermatheca    137.7 Adult InseminatedFemale Spermatheca    161.7 Adult Ovary    369.6 Adult Testis    371.6 Adult Male Accessory Gland    342.3 Adult Carcass    227.9 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    353.25 Larval Midgut    372.4 Larval Hindgut    316.4 Larval Malpighian Tubules    212 Larval Fat Body    336.8 Larval Salivary Gland    451.8 Larval Trachea    375.725 Larval Carcass    516.425 Adult Head    183.3 Adult Eye    238.775 Adult Brain    209.8 Adult Thoracic-Abdominal Ganglion    167.5 Adult Crop    289.4 Adult Midgut    334.4 Adult Hindgut    263 Adult Malpighian Tubules    75.7 Adult Fat Body    322 Adult Salivary Gland    170.8 Adult Heart    292.8 Adult VirginFemale Spermatheca    137.7 Adult InseminatedFemale Spermatheca    161.7 Adult Ovary    369.6 Adult Testis    371.6 Adult Male Accessory Gland    342.3 Adult Carcass    227.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0039160 expression level Tissue   Expression Level Larval Central Nervous System    353.25 Larval Midgut    372.4 Larval Hindgut    316.4 Larval Malpighian Tubules    212 Larval Fat Body    336.8 Larval Salivary Gland    451.8 Larval Trachea    375.725 Larval Carcass    516.425 Adult Head    183.3 Adult Eye    238.775 Adult Brain    209.8 Adult Thoracic-Abdominal Ganglion    167.5 Adult Crop    289.4 Adult Midgut    334.4 Adult Hindgut    263 Adult Malpighian Tubules    75.7 Adult Fat Body    322 Adult Salivary Gland    170.8 Adult Heart    292.8 Adult VirginFemale Spermatheca    137.7 Adult InseminatedFemale Spermatheca    161.7 Adult Ovary    369.6 Adult Testis    371.6 Adult Male Accessory Gland    342.3 Adult Carcass    227.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    353.25 Larval Midgut    372.4 Larval Hindgut    316.4 Larval Malpighian Tubules    212 Larval Fat Body    336.8 Larval Salivary Gland    451.8 Larval Trachea    375.725 Larval Carcass  516.425 Adult Head    183.3 Adult Eye    238.775 Adult Brain    209.8 Adult Thoracic-Abdominal Ganglion    167.5 Adult Crop    289.4 Adult Midgut    334.4 Adult Hindgut    263 Adult Malpighian Tubules    75.7 Adult Fat Body    322 Adult Salivary Gland    170.8 Adult Heart    292.8 Adult VirginFemale Spermatheca    137.7 Adult InseminatedFemale Spermatheca    161.7 Adult Ovary    369.6 Adult Testis    371.6 Adult Male Accessory Gland    342.3 Adult Carcass    227.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    353.25 Larval Midgut    372.4 Larval Hindgut    316.4 Larval Malpighian Tubules    212 Larval Fat Body    336.8 Larval Salivary Gland    451.8 Larval Trachea    375.725 Larval Carcass    516.425 Adult Head    183.3 Adult Eye    238.775 Adult Brain    209.8 Adult Thoracic-Abdominal Ganglion    167.5 Adult Crop    289.4 Adult Midgut    334.4 Adult Hindgut    263 Adult Malpighian Tubules    75.7 Adult Fat Body    322 Adult Salivary Gland    170.8 Adult Heart    292.8 Adult VirginFemale Spermatheca    137.7 Adult InseminatedFemale Spermatheca    161.7 Adult Ovary    369.6 Adult Testis    371.6 Adult Male Accessory Gland    342.3 Adult Carcass    227.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    353.25 Larval Midgut    372.4 Larval Hindgut    316.4 Larval Malpighian Tubules    212 Larval Fat Body    336.8 Larval Salivary Gland    451.8 Larval Trachea    375.725 Larval Carcass    516.425 Adult Head    183.3 Adult Eye    238.775 Adult Brain    209.8 Adult Thoracic-Abdominal Ganglion    167.5 Adult Crop    289.4 Adult Midgut    334.4 Adult Hindgut    263 Adult Malpighian Tubules    75.7 Adult Fat Body    322 Adult Salivary Gland    170.8 Adult Heart    292.8 Adult VirginFemale Spermatheca    137.7 Adult InseminatedFemale Spermatheca    161.7 Adult Ovary    369.6 Adult Testis    371.6 Adult Male Accessory Gland    342.3 Adult Carcass    227.9 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    183.3   NA  Eye    238.775   NA  Brain    209.8   353.25  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    167.5   NA  Crop    289.4   372.4  Midgut    334.4   316.4  Hindgut    263   212  Malpighian Tubules    75.7   336.8  Fat Body    322   451.8  Salivary Gland    170.8   NA  Heart    292.8   375.725  Trachea    NA   NA  VirginFemale Spermatheca    137.7   NA  InseminatedFemale Spermatheca    161.7   NA  Ovary    369.6   NA  Testis    371.6   NA  Male Accessory Gland    342.3   516.425  Carcass    227.9 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_30
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039160 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG5510-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CG5510 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG5510 Class Mutagen Stocks Known lesion CG5510GD17079 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG5510KK107583 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Apc2-79 (Takacs et al., 2008) Df(3R)Exel6198 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD12803} NA P{GD17079} NA P{KK107583} NA
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 1 unique term )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
membrane inferred from electronic annotation with InterPro:IPR005052 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG5510 allele Gene References
External Data
Linkouts	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0039160 DroID - A comprehensive database of gene and protein interactions. • FBgn0039160 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42872
Orthologs
Genome-wide drosophilid orthologs	Dana\GF18890 Dere\GG12366 Dgri\GH19087 Dmoj\GI23425 Dper\GL24136 Dpse\GA18939 Dsec\GM23505 Dsim\GD18315 Dvir\GJ14528 Dwil\GK11718 Dyak\GE10821
Curated drosophilid orthologs	Dpse\GA18939
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL010584-PA Aedes aegypti (mosquito) AGAP004407-PA Anopheles gambiae (mosquito) XP_625194.1 Apis mellifera (honey bee) XP_001952501.1 Acyrthosiphon pisum (pea aphid) 37267 Batrachochytrium dendrobatidis (chytrid fungus) 129693 Branchiostoma floridae (lancelet) XP_001902335.1 Brugia malayi (roundworm nematode) BGIBMGA010839-PA Bombyx mori (silk worm) ENSBTAP00000010569 Bos taurus (bovine) CN25328 Caenorhabditis brenneri (small nematode) CBP01921 Caenorhabditis briggsae (nematode) CE23946 Caenorhabditis elegans (worm) ENSCAFP00000024181 Canis familiaris (dog) ENSCINP00000005331 Ciona intestinalis (sea squirt) JA14203 Caenorhabditis japonica (nematode) cn08422 Cryptococcus neoformans (yeast-like fungus) CPIJ001653 Culex pipens (mosquito) ENSCPOP00000003640 Cavia porcellus (guinea pig) RP04503 Caenorhabditis remanei (nematode) ENSCSAVP00000001774 Ciona savignyi (sedentary tunicate) 227830 Capitella spl (polychaete worm) DEHA2C09900g Debaryomyces Hansenii (yeast) 209797 Daphnia pulex (daphnia) ENSDARP00000083123 Danio rerio (zebra fish) ENSECAP00000010401 Equus caballus (horse) XP_651747 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000022210 Gymnopilus aculeatus (mushroom) 65456 Hypsipyla robusta (cedar shoot borer) ENSP00000303366 Homo sapiens (human) ISCW012623-PA Ixodes scapularis (deer tick) KLLA0D05863g Kluyveromyces lactis (yeast) 203299 Lottia gigantea (owl limpet) 33100 Monocosta brevicollis (choanoflagellate) ENSMODP00000005405 Monodelphis domestica (gray opossum) ENSMMUP00000015078 Macaca mulatta (rhesus monkey) ENSMUSP00000021940 Mus musculus (house mouse) 82673 Nematostella vectensis (starlet anemone) XP_001602865.1 Nasonia vitripennis (wasp) ENSOANP00000024308 Ornithorynchus anatinus (platypus) ENSORLP00000020395 Oryzias latipes (japanese killifish) PHUM004368-PA Pediculus humanus (human body louse) PP04357 Pristionchus pacificus (nematode) ENSPPYP00000018003 Pongo pygmaeus (orangutan) 73325 Phytophthora ramorum (sudden oak death pathogen) 131341 Phytophthora sojae (root rot pathogen) ENSPTRP00000030027 Pan troglodytes (chimpanzee) ENSRNOP00000021638 Rattus norvegicus (norway rat) Smp_174580 Schistosoma mansoni (trematode parasite) SPCC126.08c Schizosaccharomyces pombe (fission yeast) XP_783719.2 Strongylocentrotus purpuratus (purple sea urchin) 28425 Trichoplax adhaerens (metazoa) XP_973445.1 Tribolium castaneum (red flour beetle) Tc00.1047053506177.20 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053506239.30 Trypanosoma cruzi (parasitic trypanosome) ENSTNIP00000009077 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000002770 Takifugu rubripes (pufferfish Takifugu) 90434.m00218 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000002692 Xenopus tropicalis (frog) YALI0E06347g Yarrowia lipolytica (nonconventional yeast) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV17786 LH18264 ISCW012623 FBgn0228661 FBgn0213729 FBgn0201739 FBgn0189846 FBgn0178372 JGI_V11_209797 FBgn0078938 FBgn0161726 FBgn0146151 FBgn0126554 FBgn0104655 FBgn0095904 CPIJ001653 BGIBMGA010839 ACYPI007683 GB14056 AGAP004407 AAEL010584 PB25376 PHUM457100 GLEAN_12578
Stocks & Reagents
Stocks Listed in FlyBase ( 2 )
VDRC	v49025 w1118; P{GD17079}v49025 v49027 w1118; P{GD17079}v49027
Genomic Clones ( 1 )
	BACR29F06 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 65 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE50040
Other clones	DPiM_RE50040
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GM23040 LD02431 LD05427 LD25476 LD44388 RE56269 RH16378 RH41491 RH67866 SD07804 SD15738 SD23988 SD24888
Other clones	78386 164998 Dmel_dig_005569_0630_0435 Dmel_dig_012790_0662_1532 Dmel_neb_014453_0375_2412 EC29872 EC43572 EK206831 EK269109 EK269657 ESG016b.E21_E05 FGM237H11 RP003015707 RP003064399 RP003065721 RP003089963 RP003120852 RP003140061 RP003156621 RP003203538 RP003215195 RP003220032 RP003231030 RP003247087 RP003256343 RP003287634 RP003303718 RP003321967 RP003334629 RP003334945 RP003345385 RP003345708 RP003345999 RP003359294 RP003380322 RP003382932 RP003385244 RP003397260 RP003440889 RP003459567 RP003461045 RP003476354 RP003483715 RP003495141 RP003516586 RP003531491 RP003562944 RP003582069 RP003622438 RP003640588
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0039160 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42872
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_142967 RefSeq (Proteins) • NP_651224 DDBJ / EMBL / GenBank • AAF56250 AAM29497 AY113492 BI364849 Entrez Gene - A searchable database of RefSeq genes. • 42872 UniProtKB/TrEMBL • Q9VCC2
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Legume-like lectin (IPR005052) Concanavalin A-like lectin/glucanase (IPR008985) Concanavalin A-like lectin/glucanase, subgroup (IPR013320)
Linkouts
	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0039160 DroID - A comprehensive database of gene and protein interactions. • FBgn0039160 DRSC - Results from RNAi screens. • FBgn0039160 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039160 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG5510-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0039160 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42872 InParanoid A subset of ortholog calls from InParanoid. • AAEL010584-PA Aedes aegypti (mosquito) AGAP004407-PA Anopheles gambiae (mosquito) XP_625194.1 Apis mellifera (honey bee) XP_001952501.1 Acyrthosiphon pisum (pea aphid) 37267 Batrachochytrium dendrobatidis (chytrid fungus) 129693 Branchiostoma floridae (lancelet) XP_001902335.1 Brugia malayi (roundworm nematode) BGIBMGA010839-PA Bombyx mori (silk worm) ENSBTAP00000010569 Bos taurus (bovine) CN25328 Caenorhabditis brenneri (small nematode) CBP01921 Caenorhabditis briggsae (nematode) CE23946 Caenorhabditis elegans (worm) ENSCAFP00000024181 Canis familiaris (dog) ENSCINP00000005331 Ciona intestinalis (sea squirt) JA14203 Caenorhabditis japonica (nematode) cn08422 Cryptococcus neoformans (yeast-like fungus) CPIJ001653 Culex pipens (mosquito) ENSCPOP00000003640 Cavia porcellus (guinea pig) RP04503 Caenorhabditis remanei (nematode) ENSCSAVP00000001774 Ciona savignyi (sedentary tunicate) 227830 Capitella spl (polychaete worm) DEHA2C09900g Debaryomyces Hansenii (yeast) 209797 Daphnia pulex (daphnia) ENSDARP00000083123 Danio rerio (zebra fish) ENSECAP00000010401 Equus caballus (horse) XP_651747 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000022210 Gymnopilus aculeatus (mushroom) 65456 Hypsipyla robusta (cedar shoot borer) ENSP00000303366 Homo sapiens (human) ISCW012623-PA Ixodes scapularis (deer tick) KLLA0D05863g Kluyveromyces lactis (yeast) 203299 Lottia gigantea (owl limpet) 33100 Monocosta brevicollis (choanoflagellate) ENSMODP00000005405 Monodelphis domestica (gray opossum) ENSMMUP00000015078 Macaca mulatta (rhesus monkey) ENSMUSP00000021940 Mus musculus (house mouse) 82673 Nematostella vectensis (starlet anemone) XP_001602865.1 Nasonia vitripennis (wasp) ENSOANP00000024308 Ornithorynchus anatinus (platypus) ENSORLP00000020395 Oryzias latipes (japanese killifish) PHUM004368-PA Pediculus humanus (human body louse) PP04357 Pristionchus pacificus (nematode) ENSPPYP00000018003 Pongo pygmaeus (orangutan) 73325 Phytophthora ramorum (sudden oak death pathogen) 131341 Phytophthora sojae (root rot pathogen) ENSPTRP00000030027 Pan troglodytes (chimpanzee) ENSRNOP00000021638 Rattus norvegicus (norway rat) Smp_174580 Schistosoma mansoni (trematode parasite) SPCC126.08c Schizosaccharomyces pombe (fission yeast) XP_783719.2 Strongylocentrotus purpuratus (purple sea urchin) 28425 Trichoplax adhaerens (metazoa) XP_973445.1 Tribolium castaneum (red flour beetle) Tc00.1047053506177.20 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053506239.30 Trypanosoma cruzi (parasitic trypanosome) ENSTNIP00000009077 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000002770 Takifugu rubripes (pufferfish Takifugu) 90434.m00218 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000002692 Xenopus tropicalis (frog) YALI0E06347g Yarrowia lipolytica (nonconventional yeast) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42872 modMine - Data generated by the modENCODE project. • FBgn0039160 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV17786 LH18264 ISCW012623 FBgn0228661 FBgn0213729 FBgn0201739 FBgn0189846 FBgn0178372 JGI_V11_209797 FBgn0078938 FBgn0161726 FBgn0146151 FBgn0126554 FBgn0104655 FBgn0095904 CPIJ001653 BGIBMGA010839 ACYPI007683 GB14056 AGAP004407 AAEL010584 PB25376 PHUM457100 GLEAN_12578
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG5510 (Keleman et al., 2009.8.5)
Name Synonym
Secondary FlyBase IDs
References ( 11 )
Research paper	Blanco et al., 2010, BMC Dev. Biol. 10: 94 Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Takacs et al., 2008, Science 319(5861): Supporting online material. [FBrf0202572]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Curated genome annotation	Ashburner, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126651]