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Gene Dmel\Esyt2

General Information
Symbol	Dmel\Esyt2	Species	D. melanogaster
Name		Annotation symbol	CG6643
Feature type	protein_coding_gene	FlyBase ID	FBgn0039208
Gene Model Status	Current	Stock availability	5 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	96A7-96A7	Sequence location	3R:20,370,441..20,382,271 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\Esyt2 (CG6643, FBgn0039208). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. Protein features are: C2 calcium-dependent membrane targeting; C2 calcium/lipid-binding domain, CaLB; C2 membrane targeting protein. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression. Peak expression observed within 18-24 hour embryonic stages, during late pupal stages. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult organs/tissues expressed at moderate or high levels. Expression at high levels in the following post-embryonic organs or tissues: adult crop, larval/adult hindgut, adult heart, larval salivary gland, larval trachea, adult spermathecae, adult male accessory gland, larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, larval midgut, larval/adult fat body, adult salivary gland, adult testis, adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1629776_a_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of Esyt2. Gene sequence location is 3R:20370441..20382271.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2011_10	Controlled Vocabulary Terms day 42 of adulthood day 41 of adulthood day 30 of adulthood day 49 of adulthood day 17 of adulthood day 45 of adulthood day 8 of adulthood day 26 of adulthood day 21 of adulthood day 13 of adulthood day 25 of adulthood day 20 of adulthood day 22 of adulthood day 39 of adulthood day 7 of adulthood day 36 of adulthood day 11 of adulthood day 37 of adulthood day 27 of adulthood day 18 of adulthood day 19 of adulthood day 28 of adulthood day 9 of adulthood day 29 of adulthood adult heart day 40 of adulthood day 16 of adulthood day 24 of adulthood day 15 of adulthood day 33 of adulthood day 43 of adulthood day 47 of adulthood day 38 of adulthood day 32 of adulthood day 48 of adulthood day 23 of adulthood day 35 of adulthood day 12 of adulthood day 10 of adulthood day 31 of adulthood day 34 of adulthood day 44 of adulthood day 14 of adulthood day 46 of adulthood
FB2012_01	Sequence features HFA16082 BKN21941
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 96A7-96A7   Limits computationally determined from genome sequence between P{PZ}crb07207&P{PZ}BRWD305842 and P{EP}CycB3EP3127
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Esyt2 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	DGC clone appears problematic: incomplete CDS
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Esyt2-RA FBtr0084647  NM_170652   3120   816 Esyt2-RB FBtr0084648  NM_170653   2972   849 Esyt2-RC FBtr0306024     2984   853
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Esyt2-PA   FBpp0084031   90.9   816   6.46     NP_733010   AAF56313 Esyt2-PB   FBpp0084032   94.5   849   5.91     NP_733011   AAN14000 Esyt2-PC   FBpp0297166   94.9   853   6.01
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • C2 calcium-dependent membrane targeting (IPR000008) C2 calcium/lipid-binding domain, CaLB (IPR008973) C2 membrane targeting protein (IPR018029)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014297 AAF56313   AE014297 AAN14000   AI063911   AI107053   AI107525   AI293691   AI386722   AI402334   AW941842   AY051567 AAK92991   BF496914   BF505384   BG632295   BI165087   BI166785   BI168179   BI168238   BI214715   BI216820   BI230706   BI240151   BI356638   BI362341   BI481715   BI486148   BT001393 AAN71148   BT031342   CA806282   CA807319   CK660556   CO177195   CO277056   CO277279   CO312970   CO340813   CO343033   CO343073   CZ490341   EC202564   EC213989   EC216948   EC232256   EC241476   EC247501   EC253671   EC253677   EL886800   EL886864   ES688547   GH753231   GH754316   GH759398   GH770902   GH772285   GH772289   GH776046   GH777987   GH780525   GH781321   GH783150   GH793973   GH795786   GH796082   GH799416   GH801464   GH803331   GH810379   GH817495   GH824094   GH828303   GH836077   GH846555   GH850214   GH853630   GH863586   GH866156   GH866852   GH872250   GH876663   GH887350   GH890187   GH896909   GH898865   GH905442   GH912152   GH914259   GH914818   GH921621   GH921992   GH922978   GH924073   GH926210   GH937236   GH940635
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q7KS16 Q8IH66 Q961I7 Q9VC62
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
mass spectroscopy Stage Tissue/Position (including subcellular localization) Reference day 7 of adulthood -- day 49 of adulthood   adult heart   (Cammarato et al., 2011)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0039208    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0039208 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression. Peak expression observed within 18-24 hour embryonic stages, during late pupal stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0039208 expression level Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    11 embryo 04-06hr    20 embryo 06-08hr    14 embryo 08-10hr    43 embryo 10-12hr    121 embryo 12-14hr    383 embryo 14-16hr    1485 embryo 16-18hr    2798 embryo 18-20hr    4724 embryo 20-22hr    5761 embryo 22-24hr    6865 larva L1    1973 larva L2    1579 larva L3 12hr old    2400 larva L3 puffstage 1-2    2450 larva L3 puffstage 3-6    2046 larva L3 puffstage 7-9    1165 white prepupae new    484 white prepupae 12hr    3464 white prepupae 24hr    860 pupae 2d postWPP    775 pupae 3d postWPP    2075 pupae 4d postWPP    5001 adult male 01day    1924 adult male 05day    2036 adult male 30day    2341 adult female 01day    1032 adult female 05day    485 adult female 30day    542 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    11 embryo 04-06hr    20 embryo 06-08hr    14 embryo 08-10hr    43 embryo 10-12hr  (121) embryo 12-14hr  (383) embryo 14-16hr  (1485) embryo 16-18hr  (2798) embryo 18-20hr  (4724) embryo 20-22hr  (5761) embryo 22-24hr  (6865) larva L1  (1973) larva L2  (1579) larva L3 12hr old  (2400) larva L3 puffstage 1-2  (2450) larva L3 puffstage 3-6  (2046) larva L3 puffstage 7-9  (1165) white prepupae new  (484) white prepupae 12hr  (3464) white prepupae 24hr  (860) pupae 2d postWPP  (775) pupae 3d postWPP  (2075) pupae 4d postWPP  (5001) adult male 01day  (1924) adult male 05day  (2036) adult male 30day  (2341) adult female 01day  (1032) adult female 05day  (485) adult female 30day  (542) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    11 embryo 04-06hr    20 embryo 06-08hr    14 embryo 08-10hr    43 embryo 10-12hr    121 embryo 12-14hr    383 embryo 14-16hr  1485 embryo 16-18hr  (2798) embryo 18-20hr  (4724) embryo 20-22hr  (5761) embryo 22-24hr  (6865) larva L1  (1973) larva L2  (1579) larva L3 12hr old  (2400) larva L3 puffstage 1-2  (2450) larva L3 puffstage 3-6  (2046) larva L3 puffstage 7-9    1165 white prepupae new    484 white prepupae 12hr  (3464) white prepupae 24hr    860 pupae 2d postWPP    775 pupae 3d postWPP  (2075) pupae 4d postWPP  (5001) adult male 01day  (1924) adult male 05day  (2036) adult male 30day  (2341) adult female 01day    1032 adult female 05day    485 adult female 30day    542 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    11 embryo 04-06hr    20 embryo 06-08hr    14 embryo 08-10hr    43 embryo 10-12hr    121 embryo 12-14hr    383 embryo 14-16hr    1485 embryo 16-18hr    2798 embryo 18-20hr    4724 embryo 20-22hr    5761 embryo 22-24hr    6865 larva L1    1973 larva L2    1579 larva L3 12hr old    2400 larva L3 puffstage 1-2    2450 larva L3 puffstage 3-6    2046 larva L3 puffstage 7-9    1165 white prepupae new    484 white prepupae 12hr    3464 white prepupae 24hr    860 pupae 2d postWPP    775 pupae 3d postWPP    2075 pupae 4d postWPP    5001 adult male 01day    1924 adult male 05day    2036 adult male 30day    2341 adult female 01day    1032 adult female 05day    485 adult female 30day    542 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    11 embryo 04-06hr    20 embryo 06-08hr    14 embryo 08-10hr    43 embryo 10-12hr    121 embryo 12-14hr    383 embryo 14-16hr    1485 embryo 16-18hr    2798 embryo 18-20hr    4724 embryo 20-22hr    5761 embryo 22-24hr    6865 larva L1    1973 larva L2    1579 larva L3 12hr old    2400 larva L3 puffstage 1-2    2450 larva L3 puffstage 3-6    2046 larva L3 puffstage 7-9    1165 white prepupae new    484 white prepupae 12hr    3464 white prepupae 24hr    860 pupae 2d postWPP    775 pupae 3d postWPP    2075 pupae 4d postWPP    5001 adult male 01day    1924 adult male 05day    2036 adult male 30day    2341 adult female 01day    1032 adult female 05day    485 adult female 30day    542 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0039208 expression level Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    11 embryo 04-06hr    20 embryo 06-08hr    14 embryo 08-10hr    43 embryo 10-12hr    121 embryo 12-14hr    383 embryo 14-16hr    1485 embryo 16-18hr    2798 embryo 18-20hr    4724 embryo 20-22hr    5761 embryo 22-24hr    6865 larva L1    1973 larva L2    1579 larva L3 12hr old    2400 larva L3 puffstage 1-2    2450 larva L3 puffstage 3-6    2046 larva L3 puffstage 7-9    1165 white prepupae new    484 white prepupae 12hr    3464 white prepupae 24hr    860 pupae 2d postWPP    775 pupae 3d postWPP    2075 pupae 4d postWPP    5001 adult male 01day    1924 adult male 05day    2036 adult male 30day    2341 adult female 01day    1032 adult female 05day    485 adult female 30day    542 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    11 embryo 04-06hr    20 embryo 06-08hr    14 embryo 08-10hr    43 embryo 10-12hr  121 embryo 12-14hr  (383) embryo 14-16hr  (1485) embryo 16-18hr  (2798) embryo 18-20hr  (4724) embryo 20-22hr  (5761) embryo 22-24hr  (6865) larva L1  (1973) larva L2  (1579) larva L3 12hr old  (2400) larva L3 puffstage 1-2  (2450) larva L3 puffstage 3-6  (2046) larva L3 puffstage 7-9  (1165) white prepupae new  (484) white prepupae 12hr  (3464) white prepupae 24hr  (860) pupae 2d postWPP  (775) pupae 3d postWPP  (2075) pupae 4d postWPP  (5001) adult male 01day  (1924) adult male 05day  (2036) adult male 30day  (2341) adult female 01day  (1032) adult female 05day  (485) adult female 30day  (542) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    11 embryo 04-06hr    20 embryo 06-08hr    14 embryo 08-10hr    43 embryo 10-12hr    121 embryo 12-14hr    383 embryo 14-16hr  1485 embryo 16-18hr  (2798) embryo 18-20hr  (4724) embryo 20-22hr  (5761) embryo 22-24hr  (6865) larva L1  1973 larva L2  1579 larva L3 12hr old  2400 larva L3 puffstage 1-2  2450 larva L3 puffstage 3-6  2046 larva L3 puffstage 7-9    1165 white prepupae new    484 white prepupae 12hr  (3464) white prepupae 24hr    860 pupae 2d postWPP    775 pupae 3d postWPP  2075 pupae 4d postWPP  (5001) adult male 01day  1924 adult male 05day  2036 adult male 30day  2341 adult female 01day    1032 adult female 05day    485 adult female 30day    542 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    11 embryo 04-06hr    20 embryo 06-08hr    14 embryo 08-10hr    43 embryo 10-12hr    121 embryo 12-14hr    383 embryo 14-16hr    1485 embryo 16-18hr    2798 embryo 18-20hr    4724 embryo 20-22hr    5761 embryo 22-24hr    6865 larva L1    1973 larva L2    1579 larva L3 12hr old    2400 larva L3 puffstage 1-2    2450 larva L3 puffstage 3-6    2046 larva L3 puffstage 7-9    1165 white prepupae new    484 white prepupae 12hr    3464 white prepupae 24hr    860 pupae 2d postWPP    775 pupae 3d postWPP    2075 pupae 4d postWPP    5001 adult male 01day    1924 adult male 05day    2036 adult male 30day    2341 adult female 01day    1032 adult female 05day    485 adult female 30day    542 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    11 embryo 04-06hr    20 embryo 06-08hr    14 embryo 08-10hr    43 embryo 10-12hr    121 embryo 12-14hr    383 embryo 14-16hr    1485 embryo 16-18hr    2798 embryo 18-20hr    4724 embryo 20-22hr    5761 embryo 22-24hr    6865 larva L1    1973 larva L2    1579 larva L3 12hr old    2400 larva L3 puffstage 1-2    2450 larva L3 puffstage 3-6    2046 larva L3 puffstage 7-9    1165 white prepupae new    484 white prepupae 12hr    3464 white prepupae 24hr    860 pupae 2d postWPP    775 pupae 3d postWPP    2075 pupae 4d postWPP    5001 adult male 01day    1924 adult male 05day    2036 adult male 30day    2341 adult female 01day    1032 adult female 05day    485 adult female 30day    542 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0039208    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0039208 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult organs/tissues expressed at moderate or high levels. Expression at high levels in the following post-embryonic organs or tissues: adult crop, larval/adult hindgut, adult heart, larval salivary gland, larval trachea, adult spermathecae, adult male accessory gland, larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, larval midgut, larval/adult fat body, adult salivary gland, adult testis, adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0039208 expression level Tissue   Expression Level Larval Central Nervous System    186.675 Larval Midgut    103.2 Larval Hindgut    1155.2 Larval Malpighian Tubules    82.5 Larval Fat Body    454.9 Larval Salivary Gland    1415.7 Larval Trachea    1275.7 Larval Carcass    1133.2 Adult Head    432.2 Adult Eye    426.875 Adult Brain    376.9 Adult Thoracic-Abdominal Ganglion    413 Adult Crop    1334.1 Adult Midgut    75.3 Adult Hindgut    865.3 Adult Malpighian Tubules    81.9 Adult Fat Body    390.6 Adult Salivary Gland    429.1 Adult Heart    516.825 Adult VirginFemale Spermatheca    640.8 Adult InseminatedFemale Spermatheca    778.4 Adult Ovary    23 Adult Testis    283.8 Adult Male Accessory Gland    946.2 Adult Carcass    453.4 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    186.675 Larval Midgut    103.2 Larval Hindgut  (1155.2) Larval Malpighian Tubules    82.5 Larval Fat Body    454.9 Larval Salivary Gland  (1415.7) Larval Trachea  (1275.7) Larval Carcass  (1133.2) Adult Head    432.2 Adult Eye    426.875 Adult Brain    376.9 Adult Thoracic-Abdominal Ganglion    413 Adult Crop  (1334.1) Adult Midgut    75.3 Adult Hindgut  (865.3) Adult Malpighian Tubules    81.9 Adult Fat Body    390.6 Adult Salivary Gland    429.1 Adult Heart  516.825 Adult VirginFemale Spermatheca  (640.8) Adult InseminatedFemale Spermatheca  (778.4) Adult Ovary    23 Adult Testis    283.8 Adult Male Accessory Gland  (946.2) Adult Carcass    453.4 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    186.675 Larval Midgut    103.2 Larval Hindgut  (1155.2) Larval Malpighian Tubules    82.5 Larval Fat Body    454.9 Larval Salivary Gland  (1415.7) Larval Trachea  (1275.7) Larval Carcass  (1133.2) Adult Head    432.2 Adult Eye    426.875 Adult Brain    376.9 Adult Thoracic-Abdominal Ganglion    413 Adult Crop  (1334.1) Adult Midgut    75.3 Adult Hindgut    865.3 Adult Malpighian Tubules    81.9 Adult Fat Body    390.6 Adult Salivary Gland    429.1 Adult Heart    516.825 Adult VirginFemale Spermatheca    640.8 Adult InseminatedFemale Spermatheca    778.4 Adult Ovary    23 Adult Testis    283.8 Adult Male Accessory Gland    946.2 Adult Carcass    453.4 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    186.675 Larval Midgut    103.2 Larval Hindgut    1155.2 Larval Malpighian Tubules    82.5 Larval Fat Body    454.9 Larval Salivary Gland    1415.7 Larval Trachea    1275.7 Larval Carcass    1133.2 Adult Head    432.2 Adult Eye    426.875 Adult Brain    376.9 Adult Thoracic-Abdominal Ganglion    413 Adult Crop    1334.1 Adult Midgut    75.3 Adult Hindgut    865.3 Adult Malpighian Tubules    81.9 Adult Fat Body    390.6 Adult Salivary Gland    429.1 Adult Heart    516.825 Adult VirginFemale Spermatheca    640.8 Adult InseminatedFemale Spermatheca    778.4 Adult Ovary    23 Adult Testis    283.8 Adult Male Accessory Gland    946.2 Adult Carcass    453.4 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0039208 expression level Tissue   Expression Level Larval Central Nervous System    186.675 Larval Midgut    103.2 Larval Hindgut    1155.2 Larval Malpighian Tubules    82.5 Larval Fat Body    454.9 Larval Salivary Gland    1415.7 Larval Trachea    1275.7 Larval Carcass    1133.2 Adult Head    432.2 Adult Eye    426.875 Adult Brain    376.9 Adult Thoracic-Abdominal Ganglion    413 Adult Crop    1334.1 Adult Midgut    75.3 Adult Hindgut    865.3 Adult Malpighian Tubules    81.9 Adult Fat Body    390.6 Adult Salivary Gland    429.1 Adult Heart    516.825 Adult VirginFemale Spermatheca    640.8 Adult InseminatedFemale Spermatheca    778.4 Adult Ovary    23 Adult Testis    283.8 Adult Male Accessory Gland    946.2 Adult Carcass    453.4 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    186.675 Larval Midgut    103.2 Larval Hindgut  (1155.2) Larval Malpighian Tubules    82.5 Larval Fat Body    454.9 Larval Salivary Gland  (1415.7) Larval Trachea  (1275.7) Larval Carcass  (1133.2) Adult Head    432.2 Adult Eye    426.875 Adult Brain    376.9 Adult Thoracic-Abdominal Ganglion    413 Adult Crop  (1334.1) Adult Midgut    75.3 Adult Hindgut  (865.3) Adult Malpighian Tubules    81.9 Adult Fat Body    390.6 Adult Salivary Gland    429.1 Adult Heart  516.825 Adult VirginFemale Spermatheca  640.8 Adult InseminatedFemale Spermatheca  778.4 Adult Ovary    23 Adult Testis    283.8 Adult Male Accessory Gland  (946.2) Adult Carcass    453.4 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    186.675 Larval Midgut    103.2 Larval Hindgut  1155.2 Larval Malpighian Tubules    82.5 Larval Fat Body    454.9 Larval Salivary Gland  1415.7 Larval Trachea  1275.7 Larval Carcass  1133.2 Adult Head    432.2 Adult Eye    426.875 Adult Brain    376.9 Adult Thoracic-Abdominal Ganglion    413 Adult Crop  1334.1 Adult Midgut    75.3 Adult Hindgut    865.3 Adult Malpighian Tubules    81.9 Adult Fat Body    390.6 Adult Salivary Gland    429.1 Adult Heart    516.825 Adult VirginFemale Spermatheca    640.8 Adult InseminatedFemale Spermatheca    778.4 Adult Ovary    23 Adult Testis    283.8 Adult Male Accessory Gland    946.2 Adult Carcass    453.4 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    186.675 Larval Midgut    103.2 Larval Hindgut    1155.2 Larval Malpighian Tubules    82.5 Larval Fat Body    454.9 Larval Salivary Gland    1415.7 Larval Trachea    1275.7 Larval Carcass    1133.2 Adult Head    432.2 Adult Eye    426.875 Adult Brain    376.9 Adult Thoracic-Abdominal Ganglion    413 Adult Crop    1334.1 Adult Midgut    75.3 Adult Hindgut    865.3 Adult Malpighian Tubules    81.9 Adult Fat Body    390.6 Adult Salivary Gland    429.1 Adult Heart    516.825 Adult VirginFemale Spermatheca    640.8 Adult InseminatedFemale Spermatheca    778.4 Adult Ovary    23 Adult Testis    283.8 Adult Male Accessory Gland    946.2 Adult Carcass    453.4 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    432.2   NA  Eye    426.875   NA  Brain    376.9   186.675  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    413   NA  Crop    1334.1   103.2  Midgut    75.3   1155.2  Hindgut    865.3   82.5  Malpighian Tubules    81.9   454.9  Fat Body    390.6   1415.7  Salivary Gland    429.1   NA  Heart    516.825   1275.7  Trachea    NA   NA  VirginFemale Spermatheca    640.8   NA  InseminatedFemale Spermatheca    778.4   NA  Ovary    23   NA  Testis    283.8   NA  Male Accessory Gland    946.2   1133.2  Carcass    453.4 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_18
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039208 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6643-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 Esyt2GD12820 Phenotype manifest in Allele
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of Esyt2 Class Mutagen Stocks Known lesion Esyt2f07596 piggyBac transposase 1 -- Esyt2MB02922 1 -- Esyt2MI01633 1 --
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Esyt2 Class Mutagen Stocks Known lesion Esyt2GD12820 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel7357 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data
Insertions
	Type of insertions Name Expression data miscellaneous insertions Mi{MIC}Esyt2MI01633 NA PBac{WH}Esyt2f07596 NA insertion of enhancer trap binary system Mi{ET1}Esyt2MB02922 No
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Esyt2 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0039208 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42929
Orthologs
Genome-wide drosophilid orthologs	Dana\GF20759 Dere\GG11303 Dgri\GH18195 Dmoj\GI10148 Dper\GL11928 Dpse\GA19748 Dsec\GM26610 Dsim\GD21109 Dvir\GJ23366 Dwil\GK12948 Dyak\GE23497
Curated drosophilid orthologs	Dpse\GA19748
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL009169-PA Aedes aegypti (mosquito) AGAP003725-PA Anopheles gambiae (mosquito) XP_396452.3 Apis mellifera (honey bee) XP_001943644.1 Acyrthosiphon pisum (pea aphid) At5g04220.2 Arabidopsis thaliana (wall cress) 119164 Branchiostoma floridae (lancelet) XP_001897176.1 Brugia malayi (roundworm nematode) BGIBMGA007503-PA Bombyx mori (silk worm) ENSBTAP00000041167 Bos taurus (bovine) CN17621 Caenorhabditis brenneri (small nematode) CBP29400 Caenorhabditis briggsae (nematode) CE30392 Caenorhabditis elegans (worm) ENSCAFP00000007816 Canis familiaris (dog) ENSCINP00000018499 Ciona intestinalis (sea squirt) CMF052C Cyanidioschyzon merolae (red alga) CPIJ001397 Culex pipens (mosquito) ENSCPOP00000008948 Cavia porcellus (guinea pig) RP41168 Caenorhabditis remanei (nematode) ENSCSAVP00000020083 Ciona savignyi (sedentary tunicate) 160561 Capitella spl (polychaete worm) DEHA2C10648g Debaryomyces Hansenii (yeast) 195427 Daphnia pulex (daphnia) ENSDARP00000017911 Danio rerio (zebra fish) ENSECAP00000005902 Equus caballus (horse) ENSGACP00000005211 Gymnopilus aculeatus (mushroom) ENSGALP00000010556 Gallus gallus (chicken) 185262 Hypsipyla robusta (cedar shoot borer) ENSP00000251527 Homo sapiens (human) ISCW008893-PA Ixodes scapularis (deer tick) KLLA0C13860g Kluyveromyces lactis (yeast) 159910 Lottia gigantea (owl limpet) 38202 Monocosta brevicollis (choanoflagellate) ENSMODP00000006713 Monodelphis domestica (gray opossum) ENSMMUP00000029434 Macaca mulatta (rhesus monkey) ENSMUSP00000098548 Mus musculus (house mouse) 247335 Nematostella vectensis (starlet anemone) XP_001603750.1 Nasonia vitripennis (wasp) ENSOANP00000009771 Ornithorynchus anatinus (platypus) ENSORLP00000013444 Oryzias latipes (japanese killifish) LOC_Os04g55220.1 Oryza sativa (asian rice) 36226 Ostreococcus tauri (green alga) PHUM005532-PA Pediculus humanus (human body louse) 114091 Physcomitrella patens (moss) ENSPPYP00000020437 Pongo pygmaeus (orangutan) 816007 Populus trichocarpa (black cottonwood) ENSPTRP00000034128 Pan troglodytes (chimpanzee) ENSRNOP00000006582 Rattus norvegicus (norway rat) 4762568 Sorghum bicolor (sorghum) YNL087W Saccharomyces cerevisiae (budding yeast) SPCC962.01 Schizosaccharomyces pombe (fission yeast) XP_001183287.1 Strongylocentrotus purpuratus (purple sea urchin) XP_974305.1 Tribolium castaneum (red flour beetle) ENSTNIP00000008567 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000012436 Takifugu rubripes (pufferfish Takifugu) 97080.m00035 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000015561 Xenopus tropicalis (frog) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB12460 NV13187 LH14112 ISCW008893 FBgn0240676 FBgn0214957 FBgn0210467 FBgn0192563 FBgn0181463 JGI_V11_195427 FBgn0079744 FBgn0149536 FBgn0132914 FBgn0125663 FBgn0103604 FBgn0097765 CPIJ001397 BGIBMGA007503 ACYPI009642 ACYPI001430 GB16451 AGAP003725 AAEL009169 PHUM524840 GLEAN_14419 GLEAN_14420 GLEAN_14421
Stocks & Reagents
Stocks Listed in FlyBase ( 5 )
Bloomington	23501 w1118; Mi{ET1}Esyt2MB02922/TM6C, Sb1 34448 y1 w*; Mi{MIC}Esyt2MI01633/TM3, Sb1 Ser1
Harvard	- PBac{WH}Esyt2f07596
VDRC	v28418 w1118; P{GD12820}v28418 v28419 w1118; P{GD12820}v28419
Genomic Clones ( 2 )
	BACR13M04 BACR47D16 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 86 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GH05251 GH21511 RE26910
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT07596 AT10922 GH04027 GH06208 GH06342 GH16904 LP06881 LP19204 RE04896 RE07006 RE08757 RE08833 RE14732 RE20822 RE24102 RE36811 RE42827 RE46876 RE64314 RE69529
Other clones	4678 78812 105624 106901 214211.2 CK01.67A.B4 EC216948 EC253677 EK052738 EK122805 EK123717 EK230830 EP11408 EP15956 EP16047 ESG012c.E21_F02 ESG017b.E21_G08 IP18081 RP003021350 RP003037839 RP003067945 RP003068027 RP003093384 RP003100671 RP003166825 RP003172751 RP003188692 RP003188962 RP003189935 RP003199604 RP003212776 RP003220079 RP003229277 RP003233667 RP003275233 RP003281074 RP003295318 RP003308978 RP003315367 RP003320115 RP003320490 RP003327385 RP003329176 RP003329227 RP003333016 RP003337235 RP003343179 RP003348556 RP003385518 RP003470031 RP003515414 RP003544240 RP003562131 RP003566210 RP003575242 RP003577338 RP003617054 RP003618707 RP003645194 RP003658717 RP003668660 RP003669577 RP003669787
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0039208 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42929
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: Esyt2 CG6643 (Craxton, 2010)
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_170652 NM_170653 RefSeq (Proteins) • NP_733010 NP_733011 DDBJ / EMBL / GenBank • AAF56313 AAK92991 AAN14000 AAN71148 AI107525 AI402334 AW941842 AY051567 BT001393 CZ490341 Entrez Gene - A searchable database of RefSeq genes. • 42929 UniProtKB/TrEMBL • Q7KS16 Q8IH66 Q9VC62 Q961I7
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • C2 calcium-dependent membrane targeting (IPR000008) C2 calcium/lipid-binding domain, CaLB (IPR008973) C2 membrane targeting protein (IPR018029)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0039208 DRSC - Results from RNAi screens. • FBgn0039208 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039208 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6643-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0039208 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42929 InParanoid A subset of ortholog calls from InParanoid. • AAEL009169-PA Aedes aegypti (mosquito) AGAP003725-PA Anopheles gambiae (mosquito) XP_396452.3 Apis mellifera (honey bee) XP_001943644.1 Acyrthosiphon pisum (pea aphid) At5g04220.2 Arabidopsis thaliana (wall cress) 119164 Branchiostoma floridae (lancelet) XP_001897176.1 Brugia malayi (roundworm nematode) BGIBMGA007503-PA Bombyx mori (silk worm) ENSBTAP00000041167 Bos taurus (bovine) CN17621 Caenorhabditis brenneri (small nematode) CBP29400 Caenorhabditis briggsae (nematode) CE30392 Caenorhabditis elegans (worm) ENSCAFP00000007816 Canis familiaris (dog) ENSCINP00000018499 Ciona intestinalis (sea squirt) CMF052C Cyanidioschyzon merolae (red alga) CPIJ001397 Culex pipens (mosquito) ENSCPOP00000008948 Cavia porcellus (guinea pig) RP41168 Caenorhabditis remanei (nematode) ENSCSAVP00000020083 Ciona savignyi (sedentary tunicate) 160561 Capitella spl (polychaete worm) DEHA2C10648g Debaryomyces Hansenii (yeast) 195427 Daphnia pulex (daphnia) ENSDARP00000017911 Danio rerio (zebra fish) ENSECAP00000005902 Equus caballus (horse) ENSGACP00000005211 Gymnopilus aculeatus (mushroom) ENSGALP00000010556 Gallus gallus (chicken) 185262 Hypsipyla robusta (cedar shoot borer) ENSP00000251527 Homo sapiens (human) ISCW008893-PA Ixodes scapularis (deer tick) KLLA0C13860g Kluyveromyces lactis (yeast) 159910 Lottia gigantea (owl limpet) 38202 Monocosta brevicollis (choanoflagellate) ENSMODP00000006713 Monodelphis domestica (gray opossum) ENSMMUP00000029434 Macaca mulatta (rhesus monkey) ENSMUSP00000098548 Mus musculus (house mouse) 247335 Nematostella vectensis (starlet anemone) XP_001603750.1 Nasonia vitripennis (wasp) ENSOANP00000009771 Ornithorynchus anatinus (platypus) ENSORLP00000013444 Oryzias latipes (japanese killifish) LOC_Os04g55220.1 Oryza sativa (asian rice) 36226 Ostreococcus tauri (green alga) PHUM005532-PA Pediculus humanus (human body louse) 114091 Physcomitrella patens (moss) ENSPPYP00000020437 Pongo pygmaeus (orangutan) 816007 Populus trichocarpa (black cottonwood) ENSPTRP00000034128 Pan troglodytes (chimpanzee) ENSRNOP00000006582 Rattus norvegicus (norway rat) 4762568 Sorghum bicolor (sorghum) YNL087W Saccharomyces cerevisiae (budding yeast) SPCC962.01 Schizosaccharomyces pombe (fission yeast) XP_001183287.1 Strongylocentrotus purpuratus (purple sea urchin) XP_974305.1 Tribolium castaneum (red flour beetle) ENSTNIP00000008567 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000012436 Takifugu rubripes (pufferfish Takifugu) 97080.m00035 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000015561 Xenopus tropicalis (frog) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42929 modMine - Data generated by the modENCODE project. • FBgn0039208 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB12460 NV13187 LH14112 ISCW008893 FBgn0240676 FBgn0214957 FBgn0210467 FBgn0192563 FBgn0181463 JGI_V11_195427 FBgn0079744 FBgn0149536 FBgn0132914 FBgn0125663 FBgn0103604 FBgn0097765 CPIJ001397 BGIBMGA007503 ACYPI009642 ACYPI001430 GB16451 AGAP003725 AAEL009169 PHUM524840 GLEAN_14419 GLEAN_14420 GLEAN_14421
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	CG6643 (Girard et al., 2006, Bartkuhn et al., 2009, Kim et al., 2005, Cammarato et al., 2011) Esyt2 (Craxton, 2010)
Name Synonym
Secondary FlyBase IDs
References ( 19 )
Research paper	Blanco et al., 2010, BMC Dev. Biol. 10: 94 Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812] Craxton, 2010, BMC Genomics 11: 37 A manual collection of Syt, Esyt, Rph3a, Rph3al, Doc2, and Dblc2 genes from 46 metazoan genomes - an open access resource for neuroscience and evolutionary biology. [FBrf0210023] Bartkuhn et al., 2009, EMBO J. 28(7): 877--888 Active promoters and insulators are marked by the centrosomal protein 190. [FBrf0207850] Girard et al., 2006, Dev. Biol. 299(2): 530--542 Chromatin immunoprecipitation reveals a novel role for the Drosophila SoxNeuro transcription factor in axonal patterning. [FBrf0194303] Kim et al., 2005, Nature Immunology 6(2): 211--218 Downregulation of lipopolysaccharide response in Drosophila by negative crosstalk between the AP1 and NF-kappaB signaling modules. [FBrf0184193] Asha et al., 2003, Genetics 163(1): 203--215 Analysis of ras-induced overproliferation in Drosophila hemocytes. [FBrf0155813]
Supplementary material	Cammarato et al., 2011, PLoS ONE 6(4): Table S1. Proteins & Peptides. [FBrf0214682] The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase	Bellen, 2011.2.28, set926.xml set926.xml [FBrf0213112] Bellen, 2007.4.5, batch731.xml batch731.xml [FBrf0191801] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. Genomic mapping of Exelixis insertion collection. [FBrf0184340] Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]
Curated genome annotation	Zhu, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126704]