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Gene Dmel\CG11857

General Information
Symbol	Dmel\CG11857	Species	D. melanogaster
Name		Annotation symbol	CG11857
Feature type	protein_coding_gene	FlyBase ID	FBgn0039303
Gene Model Status	Current	Stock availability	3 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	96C8-96C8	Sequence location	3R:21,084,619..21,086,492 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG11857 (FBgn0039303). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. Based on sequence similarity, it is predicted to be involved in the biological process: vesicle-mediated transport. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Retrieval of early ER protein Rer1. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed within 00-18 hour embryonic stages, at stages throughout the larval period, during early pupal stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult eye, larval central nervous system, adult crop, larval/adult midgut, larval hindgut, larval Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, adult female reproductive system, adult male accessory gland, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult central nervous system, adult hindgut, adult Malpighian tubules, larval fat body, larval trachea, adult testis, larval carcass. Comments on Affy2 ProbeSet: ProbeSet 1637556_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of CG11857. Gene sequence location is 3R:21084619..21086492.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2011_10	Controlled Vocabulary Terms day 42 of adulthood day 41 of adulthood day 30 of adulthood day 49 of adulthood day 17 of adulthood day 45 of adulthood day 8 of adulthood day 26 of adulthood day 21 of adulthood day 13 of adulthood day 25 of adulthood day 22 of adulthood day 20 of adulthood day 39 of adulthood day 7 of adulthood day 36 of adulthood day 11 of adulthood day 37 of adulthood day 27 of adulthood day 18 of adulthood day 19 of adulthood day 28 of adulthood day 9 of adulthood day 29 of adulthood adult heart day 40 of adulthood day 16 of adulthood day 24 of adulthood day 15 of adulthood day 33 of adulthood day 43 of adulthood day 47 of adulthood day 38 of adulthood day 32 of adulthood day 48 of adulthood day 23 of adulthood day 35 of adulthood day 12 of adulthood day 10 of adulthood day 31 of adulthood day 34 of adulthood day 44 of adulthood day 14 of adulthood day 46 of adulthood
FB2012_01	Sequence features BKN21011 HFA14411
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 96C8-96C8   Limits computationally determined from genome sequence between P{lacW}OstStt3j2D9 and P{PZ}Aats-gln05461
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG11857 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG11857-RA FBtr0084814  NM_143105   1813   203 CG11857-RB FBtr0273256  NM_001144638   1740   242
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG11857-PA   FBpp0084189   23.7   203   9.78     NP_651362   AAF56431 CG11857-PB   FBpp0271764   27.6   242   9.24     NP_001138110   ACL83566
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Retrieval of early ER protein Rer1 (IPR004932)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA141214   AA264245   AA264575   AA390471   AA392990   AA440992   AA696075   AA802503   AA949994   AE014297 AAF56431   AE014297 ACL83566   AI109632   AI296500   AI403189   AY094863 AAM11216   BE978442   BF503741   BF503897   BG639806   BI163390   BI167080   BI173053   BI173073   BI173083   BI173153   BI173591   BI212542   BI213432   BI213468   BI227556   BI227557   BI229566   BI232315   BI239710   BI240410   BI356255   BI365163   BI365164   BI366543   BI374805   BI375342   BI376014   BI376142   BI481836   BI565057   BI578756   BI610521   BI625714   BI625851   BI630983   BI632340   BI635220   BI635362   BI637016   BI637957   BI638271   BI640267   BT003610   BZ665631   CO154367   CO156039   CO179272   CO191064   CO191944   CO196411   CO265009   CO265730   CO270038   CO274098   CO287822   CO287957   CO288320   CO297222   CO297337   CO297491   CO301633   CO302046   CO303458   CO306523   CO310317   CO312203   CO313341   CO314385   CO316039   CO321475   CO321919   CO322458   CO324751   CO326749   CO330673   CO343661   CO345124   EC052213   EC056667   EC060751   EC060953   EC062543   EC062816   EC063952   EC064818   EC072712   EC073640   EC075841   EC079615   EC081494   EC083478   EC085307   EC085879   EC087343   EC087673   EC090347   EC195912   EC198539   EC205707   EC209613   EC215567   EC217091   EC218006   EC218980   EC224319   EC225628   EC229281   EC231754   EC237636   EC238450   EC241971   EC246159   EC246452   EC246787   EC247962   EC248039   EC257397   EC261175   EV577011   EV583638   FD586216   FD586365   FD586427   FD586949   GH742328   GH742412   GH745065   GH746678   GH762341   GH762698   GH762909   GH764145   GH764978   GH765214   GH765378   GH765591   GH765736   GH765822   GH767460   GH767786   GH768051   GH769068
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VBU6 B7Z0Q3
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
mass spectroscopy Stage Tissue/Position (including subcellular localization) Reference day 7 of adulthood -- day 49 of adulthood   adult heart   (Cammarato et al., 2011)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0039303    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0039303 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed within 00-18 hour embryonic stages, at stages throughout the larval period, during early pupal stages, in adult female stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0039303 expression level Developmental Stage   Expression Level embryo 00-02hr    5808 embryo 02-04hr    5416 embryo 04-06hr    6389 embryo 06-08hr    7233 embryo 08-10hr    7436 embryo 10-12hr    7731 embryo 12-14hr    7190 embryo 14-16hr    4648 embryo 16-18hr    4361 embryo 18-20hr    3258 embryo 20-22hr    2994 embryo 22-24hr    2976 larva L1    3557 larva L2    5556 larva L3 12hr old    3857 larva L3 puffstage 1-2    2672 larva L3 puffstage 3-6    3372 larva L3 puffstage 7-9    4186 white prepupae new    4117 white prepupae 12hr    2913 white prepupae 24hr    3407 pupae 2d postWPP    3565 pupae 3d postWPP    2672 pupae 4d postWPP    2304 adult male 01day    3230 adult male 05day    3842 adult male 30day    3118 adult female 01day    2926 adult female 05day    4609 adult female 30day    4918 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (5808) embryo 02-04hr  (5416) embryo 04-06hr  (6389) embryo 06-08hr  (7233) embryo 08-10hr  (7436) embryo 10-12hr  (7731) embryo 12-14hr  (7190) embryo 14-16hr  (4648) embryo 16-18hr  (4361) embryo 18-20hr  (3258) embryo 20-22hr  (2994) embryo 22-24hr  (2976) larva L1  (3557) larva L2  (5556) larva L3 12hr old  (3857) larva L3 puffstage 1-2  (2672) larva L3 puffstage 3-6  (3372) larva L3 puffstage 7-9  (4186) white prepupae new  (4117) white prepupae 12hr  (2913) white prepupae 24hr  (3407) pupae 2d postWPP  (3565) pupae 3d postWPP  (2672) pupae 4d postWPP  (2304) adult male 01day  (3230) adult male 05day  (3842) adult male 30day  (3118) adult female 01day  (2926) adult female 05day  (4609) adult female 30day  (4918) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (5808) embryo 02-04hr  (5416) embryo 04-06hr  (6389) embryo 06-08hr  (7233) embryo 08-10hr  (7436) embryo 10-12hr  (7731) embryo 12-14hr  (7190) embryo 14-16hr  (4648) embryo 16-18hr  (4361) embryo 18-20hr  (3258) embryo 20-22hr  (2994) embryo 22-24hr  (2976) larva L1  (3557) larva L2  (5556) larva L3 12hr old  (3857) larva L3 puffstage 1-2  (2672) larva L3 puffstage 3-6  (3372) larva L3 puffstage 7-9  (4186) white prepupae new  (4117) white prepupae 12hr  (2913) white prepupae 24hr  (3407) pupae 2d postWPP  (3565) pupae 3d postWPP  (2672) pupae 4d postWPP  (2304) adult male 01day  (3230) adult male 05day  (3842) adult male 30day  (3118) adult female 01day  (2926) adult female 05day  (4609) adult female 30day  (4918) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    5808 embryo 02-04hr    5416 embryo 04-06hr    6389 embryo 06-08hr    7233 embryo 08-10hr    7436 embryo 10-12hr    7731 embryo 12-14hr    7190 embryo 14-16hr    4648 embryo 16-18hr    4361 embryo 18-20hr    3258 embryo 20-22hr    2994 embryo 22-24hr    2976 larva L1    3557 larva L2    5556 larva L3 12hr old    3857 larva L3 puffstage 1-2    2672 larva L3 puffstage 3-6    3372 larva L3 puffstage 7-9    4186 white prepupae new    4117 white prepupae 12hr    2913 white prepupae 24hr    3407 pupae 2d postWPP    3565 pupae 3d postWPP    2672 pupae 4d postWPP    2304 adult male 01day    3230 adult male 05day    3842 adult male 30day    3118 adult female 01day    2926 adult female 05day    4609 adult female 30day    4918 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    5808 embryo 02-04hr    5416 embryo 04-06hr    6389 embryo 06-08hr    7233 embryo 08-10hr    7436 embryo 10-12hr    7731 embryo 12-14hr    7190 embryo 14-16hr    4648 embryo 16-18hr    4361 embryo 18-20hr    3258 embryo 20-22hr    2994 embryo 22-24hr    2976 larva L1    3557 larva L2    5556 larva L3 12hr old    3857 larva L3 puffstage 1-2    2672 larva L3 puffstage 3-6    3372 larva L3 puffstage 7-9    4186 white prepupae new    4117 white prepupae 12hr    2913 white prepupae 24hr    3407 pupae 2d postWPP    3565 pupae 3d postWPP    2672 pupae 4d postWPP    2304 adult male 01day    3230 adult male 05day    3842 adult male 30day    3118 adult female 01day    2926 adult female 05day    4609 adult female 30day    4918 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0039303 expression level Developmental Stage   Expression Level embryo 00-02hr    5808 embryo 02-04hr    5416 embryo 04-06hr    6389 embryo 06-08hr    7233 embryo 08-10hr    7436 embryo 10-12hr    7731 embryo 12-14hr    7190 embryo 14-16hr    4648 embryo 16-18hr    4361 embryo 18-20hr    3258 embryo 20-22hr    2994 embryo 22-24hr    2976 larva L1    3557 larva L2    5556 larva L3 12hr old    3857 larva L3 puffstage 1-2    2672 larva L3 puffstage 3-6    3372 larva L3 puffstage 7-9    4186 white prepupae new    4117 white prepupae 12hr    2913 white prepupae 24hr    3407 pupae 2d postWPP    3565 pupae 3d postWPP    2672 pupae 4d postWPP    2304 adult male 01day    3230 adult male 05day    3842 adult male 30day    3118 adult female 01day    2926 adult female 05day    4609 adult female 30day    4918 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (5808) embryo 02-04hr  (5416) embryo 04-06hr  (6389) embryo 06-08hr  (7233) embryo 08-10hr  (7436) embryo 10-12hr  (7731) embryo 12-14hr  (7190) embryo 14-16hr  (4648) embryo 16-18hr  (4361) embryo 18-20hr  (3258) embryo 20-22hr  (2994) embryo 22-24hr  (2976) larva L1  (3557) larva L2  (5556) larva L3 12hr old  (3857) larva L3 puffstage 1-2  (2672) larva L3 puffstage 3-6  (3372) larva L3 puffstage 7-9  (4186) white prepupae new  (4117) white prepupae 12hr  (2913) white prepupae 24hr  (3407) pupae 2d postWPP  (3565) pupae 3d postWPP  (2672) pupae 4d postWPP  (2304) adult male 01day  (3230) adult male 05day  (3842) adult male 30day  (3118) adult female 01day  (2926) adult female 05day  (4609) adult female 30day  (4918) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (5808) embryo 02-04hr  (5416) embryo 04-06hr  (6389) embryo 06-08hr  (7233) embryo 08-10hr  (7436) embryo 10-12hr  (7731) embryo 12-14hr  (7190) embryo 14-16hr  (4648) embryo 16-18hr  (4361) embryo 18-20hr  (3258) embryo 20-22hr  (2994) embryo 22-24hr  (2976) larva L1  (3557) larva L2  (5556) larva L3 12hr old  (3857) larva L3 puffstage 1-2  (2672) larva L3 puffstage 3-6  (3372) larva L3 puffstage 7-9  (4186) white prepupae new  (4117) white prepupae 12hr  (2913) white prepupae 24hr  (3407) pupae 2d postWPP  (3565) pupae 3d postWPP  (2672) pupae 4d postWPP  2304 adult male 01day  (3230) adult male 05day  (3842) adult male 30day  (3118) adult female 01day  (2926) adult female 05day  (4609) adult female 30day  (4918) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    5808 embryo 02-04hr    5416 embryo 04-06hr    6389 embryo 06-08hr    7233 embryo 08-10hr    7436 embryo 10-12hr    7731 embryo 12-14hr    7190 embryo 14-16hr    4648 embryo 16-18hr    4361 embryo 18-20hr    3258 embryo 20-22hr    2994 embryo 22-24hr    2976 larva L1    3557 larva L2    5556 larva L3 12hr old    3857 larva L3 puffstage 1-2    2672 larva L3 puffstage 3-6    3372 larva L3 puffstage 7-9    4186 white prepupae new    4117 white prepupae 12hr    2913 white prepupae 24hr    3407 pupae 2d postWPP    3565 pupae 3d postWPP    2672 pupae 4d postWPP    2304 adult male 01day    3230 adult male 05day    3842 adult male 30day    3118 adult female 01day    2926 adult female 05day    4609 adult female 30day    4918 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    5808 embryo 02-04hr    5416 embryo 04-06hr    6389 embryo 06-08hr    7233 embryo 08-10hr    7436 embryo 10-12hr    7731 embryo 12-14hr    7190 embryo 14-16hr    4648 embryo 16-18hr    4361 embryo 18-20hr    3258 embryo 20-22hr    2994 embryo 22-24hr    2976 larva L1    3557 larva L2    5556 larva L3 12hr old    3857 larva L3 puffstage 1-2    2672 larva L3 puffstage 3-6    3372 larva L3 puffstage 7-9    4186 white prepupae new    4117 white prepupae 12hr    2913 white prepupae 24hr    3407 pupae 2d postWPP    3565 pupae 3d postWPP    2672 pupae 4d postWPP    2304 adult male 01day    3230 adult male 05day    3842 adult male 30day    3118 adult female 01day    2926 adult female 05day    4609 adult female 30day    4918 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0039303    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0039303 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult eye, larval central nervous system, adult crop, larval/adult midgut, larval hindgut, larval Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, adult female reproductive system, adult male accessory gland, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult central nervous system, adult hindgut, adult Malpighian tubules, larval fat body, larval trachea, adult testis, larval carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0039303 expression level Tissue   Expression Level Larval Central Nervous System    548 Larval Midgut    510 Larval Hindgut    726.9 Larval Malpighian Tubules    668.9 Larval Fat Body    449.4 Larval Salivary Gland    2365.4 Larval Trachea    374.5 Larval Carcass    470.3 Adult Head    481.1 Adult Eye    753.2 Adult Brain    443 Adult Thoracic-Abdominal Ganglion    486.3 Adult Crop    565 Adult Midgut    510.8 Adult Hindgut    402.2 Adult Malpighian Tubules    498.5 Adult Fat Body    834.2 Adult Salivary Gland    2159.4 Adult Heart    730.3 Adult VirginFemale Spermatheca    757.3 Adult InseminatedFemale Spermatheca    726.7 Adult Ovary    639.4 Adult Testis    333.6 Adult Male Accessory Gland    1442.8 Adult Carcass    557.8 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  (548) Larval Midgut  510 Larval Hindgut  (726.9) Larval Malpighian Tubules  (668.9) Larval Fat Body    449.4 Larval Salivary Gland  (2365.4) Larval Trachea    374.5 Larval Carcass    470.3 Adult Head    481.1 Adult Eye  (753.2) Adult Brain    443 Adult Thoracic-Abdominal Ganglion    486.3 Adult Crop  (565) Adult Midgut  510.8 Adult Hindgut    402.2 Adult Malpighian Tubules    498.5 Adult Fat Body  (834.2) Adult Salivary Gland  (2159.4) Adult Heart  (730.3) Adult VirginFemale Spermatheca  (757.3) Adult InseminatedFemale Spermatheca  (726.7) Adult Ovary  (639.4) Adult Testis    333.6 Adult Male Accessory Gland  (1442.8) Adult Carcass  (557.8) Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    548 Larval Midgut    510 Larval Hindgut    726.9 Larval Malpighian Tubules    668.9 Larval Fat Body    449.4 Larval Salivary Gland  (2365.4) Larval Trachea    374.5 Larval Carcass    470.3 Adult Head    481.1 Adult Eye    753.2 Adult Brain    443 Adult Thoracic-Abdominal Ganglion    486.3 Adult Crop    565 Adult Midgut    510.8 Adult Hindgut    402.2 Adult Malpighian Tubules    498.5 Adult Fat Body    834.2 Adult Salivary Gland  (2159.4) Adult Heart    730.3 Adult VirginFemale Spermatheca    757.3 Adult InseminatedFemale Spermatheca    726.7 Adult Ovary    639.4 Adult Testis    333.6 Adult Male Accessory Gland  (1442.8) Adult Carcass    557.8 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    548 Larval Midgut    510 Larval Hindgut    726.9 Larval Malpighian Tubules    668.9 Larval Fat Body    449.4 Larval Salivary Gland    2365.4 Larval Trachea    374.5 Larval Carcass    470.3 Adult Head    481.1 Adult Eye    753.2 Adult Brain    443 Adult Thoracic-Abdominal Ganglion    486.3 Adult Crop    565 Adult Midgut    510.8 Adult Hindgut    402.2 Adult Malpighian Tubules    498.5 Adult Fat Body    834.2 Adult Salivary Gland    2159.4 Adult Heart    730.3 Adult VirginFemale Spermatheca    757.3 Adult InseminatedFemale Spermatheca    726.7 Adult Ovary    639.4 Adult Testis    333.6 Adult Male Accessory Gland    1442.8 Adult Carcass    557.8 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0039303 expression level Tissue   Expression Level Larval Central Nervous System    548 Larval Midgut    510 Larval Hindgut    726.9 Larval Malpighian Tubules    668.9 Larval Fat Body    449.4 Larval Salivary Gland    2365.4 Larval Trachea    374.5 Larval Carcass    470.3 Adult Head    481.1 Adult Eye    753.2 Adult Brain    443 Adult Thoracic-Abdominal Ganglion    486.3 Adult Crop    565 Adult Midgut    510.8 Adult Hindgut    402.2 Adult Malpighian Tubules    498.5 Adult Fat Body    834.2 Adult Salivary Gland    2159.4 Adult Heart    730.3 Adult VirginFemale Spermatheca    757.3 Adult InseminatedFemale Spermatheca    726.7 Adult Ovary    639.4 Adult Testis    333.6 Adult Male Accessory Gland    1442.8 Adult Carcass    557.8 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  548 Larval Midgut  510 Larval Hindgut  726.9 Larval Malpighian Tubules  668.9 Larval Fat Body    449.4 Larval Salivary Gland  (2365.4) Larval Trachea    374.5 Larval Carcass    470.3 Adult Head    481.1 Adult Eye  753.2 Adult Brain    443 Adult Thoracic-Abdominal Ganglion    486.3 Adult Crop  565 Adult Midgut  510.8 Adult Hindgut    402.2 Adult Malpighian Tubules    498.5 Adult Fat Body  (834.2) Adult Salivary Gland  (2159.4) Adult Heart  730.3 Adult VirginFemale Spermatheca  757.3 Adult InseminatedFemale Spermatheca  726.7 Adult Ovary  639.4 Adult Testis    333.6 Adult Male Accessory Gland  (1442.8) Adult Carcass  557.8 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    548 Larval Midgut    510 Larval Hindgut    726.9 Larval Malpighian Tubules    668.9 Larval Fat Body    449.4 Larval Salivary Gland  (2365.4) Larval Trachea    374.5 Larval Carcass    470.3 Adult Head    481.1 Adult Eye    753.2 Adult Brain    443 Adult Thoracic-Abdominal Ganglion    486.3 Adult Crop    565 Adult Midgut    510.8 Adult Hindgut    402.2 Adult Malpighian Tubules    498.5 Adult Fat Body    834.2 Adult Salivary Gland  (2159.4) Adult Heart    730.3 Adult VirginFemale Spermatheca    757.3 Adult InseminatedFemale Spermatheca    726.7 Adult Ovary    639.4 Adult Testis    333.6 Adult Male Accessory Gland  1442.8 Adult Carcass    557.8 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    548 Larval Midgut    510 Larval Hindgut    726.9 Larval Malpighian Tubules    668.9 Larval Fat Body    449.4 Larval Salivary Gland    2365.4 Larval Trachea    374.5 Larval Carcass    470.3 Adult Head    481.1 Adult Eye    753.2 Adult Brain    443 Adult Thoracic-Abdominal Ganglion    486.3 Adult Crop    565 Adult Midgut    510.8 Adult Hindgut    402.2 Adult Malpighian Tubules    498.5 Adult Fat Body    834.2 Adult Salivary Gland    2159.4 Adult Heart    730.3 Adult VirginFemale Spermatheca    757.3 Adult InseminatedFemale Spermatheca    726.7 Adult Ovary    639.4 Adult Testis    333.6 Adult Male Accessory Gland    1442.8 Adult Carcass    557.8 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    481.1   NA  Eye    753.2   NA  Brain    443   548  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    486.3   NA  Crop    565   510  Midgut    510.8   726.9  Hindgut    402.2   668.9  Malpighian Tubules    498.5   449.4  Fat Body    834.2   2365.4  Salivary Gland    2159.4   NA  Heart    730.3   374.5  Trachea    NA   NA  VirginFemale Spermatheca    757.3   NA  InseminatedFemale Spermatheca    726.7   NA  Ovary    639.4   NA  Testis    333.6   NA  Male Accessory Gland    1442.8   470.3  Carcass    557.8 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_03
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039303 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11857-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG11857 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 9-10 Stages(s) 11-12
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG11857GD13262 Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of CG11857 Class Mutagen Stocks Known lesion CG11857KG08816 P-element activity 1 --
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG11857 Class Mutagen Stocks Known lesion CG11857GD13262 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)FDD-0247625 (DrosDel Project, 2008.11.14) Df(3R)FDD-0247627 (DrosDel Project, 2008.11.14)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD13262} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{SUPor-P}CG11857KG08816 NA
Gene Ontology: Function, Process & Cellular Component ( 2 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 2 terms )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
vesicle-mediated transport inferred from sequence or structural similarity with Saccharomyces RER1 (FlyBase, 1992-)
Cellular Component
CV term Evidence References
integral to membrane inferred from electronic annotation with InterPro:IPR004932 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG11857 allele Gene References
External Data
Linkouts	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0039303 DroID - A comprehensive database of gene and protein interactions. • FBgn0039303 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 43042
Orthologs
Genome-wide drosophilid orthologs	Dana\GF17557 Dere\GG11383 Dgri\GH22588 Dmoj\GI23640 Dper\GL21709 Dpse\GA11240 Dsec\GM17826 Dsim\GD21194 Dvir\GJ24716 Dwil\GK12924 Dyak\GE23580
Curated drosophilid orthologs	Dpse\GA11240
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL010361-PA Aedes aegypti (mosquito) AGAP011996-PA Anopheles gambiae (mosquito) XP_393582.2 Apis mellifera (honey bee) XP_001945937.1 Acyrthosiphon pisum (pea aphid) At4g39220.1 Arabidopsis thaliana (wall cress) 6277 Batrachochytrium dendrobatidis (chytrid fungus) 229037 Branchiostoma floridae (lancelet) 229087 Branchiostoma floridae (lancelet) XP_001896612.1 Brugia malayi (roundworm nematode) BGIBMGA006849-PA Bombyx mori (silk worm) ENSBTAP00000012259 Bos taurus (bovine) CAL0003736 Candida albicans (a form of yeast) CBP00734 Caenorhabditis briggsae (nematode) CE03349 Caenorhabditis elegans (worm) ENSCAFP00000028668 Canis familiaris (dog) CAGL0B04697g Candida glabrata (haploid yeast) ENSCINP00000011250 Ciona intestinalis (sea squirt) JA05254 Caenorhabditis japonica (nematode) CMI263C Cyanidioschyzon merolae (red alga) cn01300 Cryptococcus neoformans (yeast-like fungus) cgd2_2250 Cryptosporidium parvum (protozoan parasite) ENSCPOP00000008096 Cavia porcellus (guinea pig) 190919 Chlamidomonas reinhardtii (green alga) RP24978 Caenorhabditis remanei (nematode) ENSCSAVP00000010470 Ciona savignyi (sedentary tunicate) 225288 Capitella spl (polychaete worm) DDB0266508 Dictyostelium discoideum (amoeba) DEHA2G11198g Debaryomyces Hansenii (yeast) 231343 Daphnia pulex (daphnia) ENSDARP00000060837 Danio rerio (zebra fish) ENSECAP00000008530 Equus caballus (horse) XP_651145 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000008650 Gymnopilus aculeatus (mushroom) ENSGALP00000039623 Gallus gallus (chicken) GL50803_15413 Giardia lamblia (flagellated protozoan) 67857 Hypsipyla robusta (cedar shoot borer) ENSP00000302088 Homo sapiens (human) ISCW011502-PA Ixodes scapularis (deer tick) KLLA0A08624g Kluyveromyces lactis (yeast) 188487 Lottia gigantea (owl limpet) LmjF22.0580 Leishmania major (virus) ENSMODP00000010089 Monodelphis domestica (gray opossum) ENSMMUP00000016208 Macaca mulatta (rhesus monkey) ENSMUSP00000030914 Mus musculus (house mouse) 185483 Nematostella vectensis (starlet anemone) XP_001608123.1 Nasonia vitripennis (wasp) ENSOANP00000011199 Ornithorynchus anatinus (platypus) LOC_Os01g01640.1 Oryza sativa (asian rice) 21127 Ostreococcus tauri (green alga) PFI0150c Plasmodium falciparum (protozoal parasite) PHUM003296-PA Pediculus humanus (human body louse) PP04916 Pristionchus pacificus (nematode) 167945 Physcomitrella patens (moss) ENSPPYP00000002295 Pongo pygmaeus (orangutan) 72333 Phytophthora ramorum (sudden oak death pathogen) 109284 Phytophthora sojae (root rot pathogen) 643100 Populus trichocarpa (black cottonwood) ENSPTRP00000000085 Pan troglodytes (chimpanzee) PVX_098600 Plasmodium vivax (protozoal parasite) ENSRNOP00000019620 Rattus norvegicus (norway rat) 4771775 Sorghum bicolor (sorghum) YCL001W Saccharomyces cerevisiae (budding yeast) Smp_099690 Schistosoma mansoni (trematode parasite) SPAC22E12.05c Schizosaccharomyces pombe (fission yeast) XP_784416.1 Strongylocentrotus purpuratus (purple sea urchin) 7073 Trichoplax adhaerens (metazoa) TA17635 Theileria annulata (apicomplexan parasite) XP_975894.1 Tribolium castaneum (red flour beetle) Tc00.1047053506857.100 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053509209.10 Trypanosoma cruzi (parasitic trypanosome) ENSTNIP00000003459 Tetraodon nigroviridis (green spotted pufferfish) TP03_0665 Theileria parva (parasitic protozoan) 36206 Thalassiosira pseudonana (marine diatom) ENSTRUP00000038371 Takifugu rubripes (pufferfish Takifugu) 3813.m01479 Tetrahymena thermophila (ciliate protozoa) 95400.m00120 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000011882 Xenopus tropicalis (frog) YALI0B07425g Yarrowia lipolytica (nonconventional yeast) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV11250 LH16229 ISCW011502 FBgn0240753 FBgn0214933 FBgn0211792 FBgn0192645 FBgn0172733 JGI_V11_231343 FBgn0071294 FBgn0159302 FBgn0146366 FBgn0130046 FBgn0103683 FBgn0094575 BGIBMGA006849 ACYPI003875 GB18994 AGAP011996 AAEL010361 PB25605 PHUM466260 GLEAN_12860
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
Bloomington	15137 y1; ry506 P{SUPor-P}CG11857KG08816/TM3, Sb1 Ser1
VDRC	v23203 w1118; P{GD13262}v23203 v23204 w1118; P{GD13262}v23204
Genomic Clones ( 3 )
	BACR06L08 BACR10P10 BACR17E12 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 153 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GH19261 RE24638
Other clones	DPiM_RE24638
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT04933 AT05124 GH08874 GH22579 GM05015 GM05714 LD07973 LD08275 LD09393 LD12133 LD15710 LD28583 LP10429 RE02771 RE07372 RE15787 RE15820 RE15822 RE15908 RE16541 RE17648 RE18832 RE18875 RE24637 RE27372 RE28363 RE36279 RE37251 RE42365 RE50395 RE50396 RE52105 RE62480 RE63123 RE63934 RE64075 RE64442 RE72670 RH16018 RH60366 RH62715 RH66190 RH66349 SD06725 SD16506 SD16689 SD18896 SD20155 SD20518 SD23081 SD26095
Other clones	12243 19156 21330 21420 30931 31216 46979 52935 55002 58722 59037 60961 62271 66743 74439 76359 82805 83068 98437 100020 101554 106718 121009 160450 165877 192644 292573 bs79h01 CK01.24A.F6 CK01.40A.F6 CK01.75A.G11 CK01.84A.C3 CK01.85A.D5 CK01.86B.H9 CK01.111A.E12 CK01.112D.D9 CK01.115B.E8 CK01.115B.G8 CK01.126D.E11 CK01380 Dmel_dig_008582_0655_2962 Dmel_dig_014904_0713_2352 EC32459 EC052213 EC257397 EK004137 EK050606 EK058926 EK066910 EK067415 EK068229 EK097218 EK113141 EK141223 EK143505 EK169939 EK181748 EK182944 EK185743 EK186808 EK188161 EK194730 EK216423 EK216725 EK221217 EK228056 EK232159 EK236009 EK241608 EK251314 EK263422 EK295857 EN04008 EN07235 EP04543 EP17763 EP21351 RM01132 RM01332 RM01532 RM01732 RP001005152 RP001005359 RP001011525 RP001014330 RP001015497 RP001015574 RP001015778 RP001019924 RP001021105 RP001025894 RP001026736 RP001036423 RP001038483 RP001042853 RP001046844 RP001047905 RP001055126 RP001055840
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0039303 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 43042
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_143105 NM_001144638 RefSeq (Proteins) • NP_651362 NP_001138110 DDBJ / EMBL / GenBank • AAF56431 AAM11216 ACL83566 AY094863 BI227557 BZ665631 Entrez Gene - A searchable database of RefSeq genes. • 43042 UniProtKB/TrEMBL • B7Z0Q3 Q9VBU6
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Retrieval of early ER protein Rer1 (IPR004932)
Linkouts
	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0039303 DroID - A comprehensive database of gene and protein interactions. • FBgn0039303 DRSC - Results from RNAi screens. • FBgn0039303 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039303 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11857-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0039303 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 43042 InParanoid A subset of ortholog calls from InParanoid. • AAEL010361-PA Aedes aegypti (mosquito) AGAP011996-PA Anopheles gambiae (mosquito) XP_393582.2 Apis mellifera (honey bee) XP_001945937.1 Acyrthosiphon pisum (pea aphid) At4g39220.1 Arabidopsis thaliana (wall cress) 6277 Batrachochytrium dendrobatidis (chytrid fungus) 229037 Branchiostoma floridae (lancelet) 229087 Branchiostoma floridae (lancelet) XP_001896612.1 Brugia malayi (roundworm nematode) BGIBMGA006849-PA Bombyx mori (silk worm) ENSBTAP00000012259 Bos taurus (bovine) CAL0003736 Candida albicans (a form of yeast) CBP00734 Caenorhabditis briggsae (nematode) CE03349 Caenorhabditis elegans (worm) ENSCAFP00000028668 Canis familiaris (dog) CAGL0B04697g Candida glabrata (haploid yeast) ENSCINP00000011250 Ciona intestinalis (sea squirt) JA05254 Caenorhabditis japonica (nematode) CMI263C Cyanidioschyzon merolae (red alga) cn01300 Cryptococcus neoformans (yeast-like fungus) cgd2_2250 Cryptosporidium parvum (protozoan parasite) ENSCPOP00000008096 Cavia porcellus (guinea pig) 190919 Chlamidomonas reinhardtii (green alga) RP24978 Caenorhabditis remanei (nematode) ENSCSAVP00000010470 Ciona savignyi (sedentary tunicate) 225288 Capitella spl (polychaete worm) DDB0266508 Dictyostelium discoideum (amoeba) DEHA2G11198g Debaryomyces Hansenii (yeast) 231343 Daphnia pulex (daphnia) ENSDARP00000060837 Danio rerio (zebra fish) ENSECAP00000008530 Equus caballus (horse) XP_651145 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000008650 Gymnopilus aculeatus (mushroom) ENSGALP00000039623 Gallus gallus (chicken) GL50803_15413 Giardia lamblia (flagellated protozoan) 67857 Hypsipyla robusta (cedar shoot borer) ENSP00000302088 Homo sapiens (human) ISCW011502-PA Ixodes scapularis (deer tick) KLLA0A08624g Kluyveromyces lactis (yeast) 188487 Lottia gigantea (owl limpet) LmjF22.0580 Leishmania major (virus) ENSMODP00000010089 Monodelphis domestica (gray opossum) ENSMMUP00000016208 Macaca mulatta (rhesus monkey) ENSMUSP00000030914 Mus musculus (house mouse) 185483 Nematostella vectensis (starlet anemone) XP_001608123.1 Nasonia vitripennis (wasp) ENSOANP00000011199 Ornithorynchus anatinus (platypus) LOC_Os01g01640.1 Oryza sativa (asian rice) 21127 Ostreococcus tauri (green alga) PFI0150c Plasmodium falciparum (protozoal parasite) PHUM003296-PA Pediculus humanus (human body louse) PP04916 Pristionchus pacificus (nematode) 167945 Physcomitrella patens (moss) ENSPPYP00000002295 Pongo pygmaeus (orangutan) 72333 Phytophthora ramorum (sudden oak death pathogen) 109284 Phytophthora sojae (root rot pathogen) 643100 Populus trichocarpa (black cottonwood) ENSPTRP00000000085 Pan troglodytes (chimpanzee) PVX_098600 Plasmodium vivax (protozoal parasite) ENSRNOP00000019620 Rattus norvegicus (norway rat) 4771775 Sorghum bicolor (sorghum) YCL001W Saccharomyces cerevisiae (budding yeast) Smp_099690 Schistosoma mansoni (trematode parasite) SPAC22E12.05c Schizosaccharomyces pombe (fission yeast) XP_784416.1 Strongylocentrotus purpuratus (purple sea urchin) 7073 Trichoplax adhaerens (metazoa) TA17635 Theileria annulata (apicomplexan parasite) XP_975894.1 Tribolium castaneum (red flour beetle) Tc00.1047053506857.100 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053509209.10 Trypanosoma cruzi (parasitic trypanosome) ENSTNIP00000003459 Tetraodon nigroviridis (green spotted pufferfish) TP03_0665 Theileria parva (parasitic protozoan) 36206 Thalassiosira pseudonana (marine diatom) ENSTRUP00000038371 Takifugu rubripes (pufferfish Takifugu) 3813.m01479 Tetrahymena thermophila (ciliate protozoa) 95400.m00120 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000011882 Xenopus tropicalis (frog) YALI0B07425g Yarrowia lipolytica (nonconventional yeast) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 43042 modMine - Data generated by the modENCODE project. • FBgn0039303 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV11250 LH16229 ISCW011502 FBgn0240753 FBgn0214933 FBgn0211792 FBgn0192645 FBgn0172733 JGI_V11_231343 FBgn0071294 FBgn0159302 FBgn0146366 FBgn0130046 FBgn0103683 FBgn0094575 BGIBMGA006849 ACYPI003875 GB18994 AGAP011996 AAEL010361 PB25605 PHUM466260 GLEAN_12860
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG11857 (Vinci et al., 2008, Nelson et al., 2005, Cammarato et al., 2011)
Name Synonym
Secondary FlyBase IDs
References ( 13 )
Research paper	Vinci et al., 2008, PLoS ONE 3(8): e2883 Preservation of genes involved in sterol metabolism in cholesterol auxotrophs: facts and hypotheses. [FBrf0205755] Nelson et al., 2005, Cell Death Diffn 12(8): 1115--1123 Isolation of gene sets affected specifically by polyglutamine expression: implication of the TOR signaling pathway in neurodegeneration. [FBrf0187248]
Supplementary material	Cammarato et al., 2011, PLoS ONE 6(4): Table S1. Proteins & Peptides. [FBrf0214682] Khanna et al., 2010, BMC Genomics 11(1): Towards a membrane proteome in Drosophila: a method for the isolation of plasma membrane. [FBrf0210978] The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase	Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
FlyBase analysis	FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	DrosDel Project, 2008.11.14, Deletion FDD-0247627. Deletion FDD-0247627. [FBrf0206147] DrosDel Project, 2008.11.14, Deletion FDD-0247625. Deletion FDD-0247625. [FBrf0206146] Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]