FlyBase Gene Report: Dmel\CCAP-R

General Information

Symbol

Dmel\CCAP-R

Species

D. melanogaster

Name

Crustacean cardioactive peptide receptor

Annotation Symbol

CG33344

Feature Type

protein_coding_gene

FlyBase ID

FBgn0039396

Gene Model Status

Current

Stock Availability

13 publicly available

Gene Snapshot

Contributions welcome

Other Summaries

Alliance
Auto summary
Gene Group
UniProtKB
Interactive Fly

Also Known As

CcapR, CCAP receptor

Key Links

Genomic Location

Cytogenetic map

96F8-96F8

Sequence location

3R:25,923,499..25,956,270 [-]

Recombination map

3-89

RefSeq locus

NT_033777 REGION:25923499..25956270

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse GBrowse

Help me choose

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

GO Summary Ribbons

Gene Ontology (GO) Annotations (7 terms)

Molecular Function (2 terms)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

enables neuropeptide receptor activity

inferred from physical interaction with FLYBASE:CCAP; FB:FBgn0039007

(Cazzamali et al., 2003, Park et al., 2002)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

enables neuropeptide receptor activity

inferred from sequence model

(Hewes and Taghert, 2001)

inferred from biological aspect of ancestor with PANTHER:PTN001200747

(assigned by GO_Central )

(Gaudet et al., 2011)

enables vasopressin receptor activity

inferred from electronic annotation with InterPro:IPR001817

(assigned by InterPro )

(FlyBase Curators et al., 2004-)

Biological Process (3 terms)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

involved_in neuropeptide signaling pathway

inferred from direct assay

(Cazzamali et al., 2003)

Terms Based on Predictions or Assertions (3 terms)

CV Term

Evidence

References

involved_in ecdysis, chitin-based cuticle

traceable author statement

(assigned by UniProt )

(Cazzamali et al., 2003)

involved_in G protein-coupled receptor signaling pathway

inferred from sequence or structural similarity

(Park et al., 2002, Brody and Cravchik, 2000)

inferred from sequence model

(Hewes and Taghert, 2001)

involved_in neuropeptide signaling pathway

inferred from biological aspect of ancestor with PANTHER:PTN001200747

(assigned by GO_Central )

(Gaudet et al., 2011)

Cellular Component (2 terms)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

located_in integral component of plasma membrane

inferred from direct assay

(Cazzamali et al., 2003)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

located_in integral component of membrane

inferred from biological aspect of ancestor with PANTHER:PTN000658753

(assigned by GO_Central )

(Gaudet et al., 2011)

inferred from sequence model

(Hewes and Taghert, 2001)

inferred from sequence or structural similarity

(Brody and Cravchik, 2000)

located_in integral component of plasma membrane

inferred from sequence or structural similarity

(Park et al., 2002)

inferred from biological aspect of ancestor with PANTHER:PTN001200747

(assigned by GO_Central )

(Gaudet et al., 2011)

Gene Group (FlyBase)

CLASS A GPCR NEUROPEPTIDE AND PROTEIN HORMONE RECEPTORS

Protein Family (UniProt)

Belongs to the G-protein coupled receptor 1 family. Vasopressin/oxytocin receptor subfamily. (Q868T3)

Protein Signatures (InterPro)

Summaries

Gene Group (FlyBase)

CLASS A GPCR NEUROPEPTIDE AND PROTEIN HORMONE RECEPTORS -: The majority of neuropeptide/protein hormone GPCR belong to the Class A family of GPCRs. The secreted ligands for this subfamily include neuropeptides, peptide hormones and protein hormones. (Adapted from FBrf0195077).

Protein Function (UniProtKB)

Binds to the cardioactive peptide (CCAP), which is a neuropeptide.

(UniProt, Q868T3)

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the JBrowse view of Dmel\CCAP-R for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Comments on Gene Model

Gene model reviewed during 5.53

gene_with_stop_codon_read_through ; SO:0000697

Double stop-codon suppression (UGA, UAG) postulated; FBrf0243886, FlyBase analysis.

Gene model reviewed during 6.32

Sequence Ontology: Class of Gene

gene_with_stop_codon_read_through

(FlyBase Genome Annotators, 2020)

nuclear_gene

protein_coding_gene

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

CCAP-R-RC

FBtr0304043

NM_206574

2986

494

CCAP-R-RD

FBtr0479818

NM_001382065

2986

521

Additional Transcript Data and Comments

Reported size (kB)

2.8 (northern blot)

(Cazzamali et al., 2003)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank

CCAP-R-PC

FBpp0293006

54.5

494

9.64

NP_996297

AAF56536

CCAP-R-PD

FBpp0428160

57.4

521

9.72

ACZ95036

Polypeptides with Identical Sequences

None of the polypeptides share 100% sequence identity.

Additional Polypeptide Data and Comments

Reported size (kDa)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\CCAP-R using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

CCAP-R_1

Linkouts

Expression Data

Expression Summary Ribbons

Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.

For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.

Transcript Expression

in situ

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 16 -- 17

VUM4 interneuron of embryonic abdominal segment 5

(Fontana and Crews, 2012)

VUM4 interneuron of embryonic abdominal segment 6

(Fontana and Crews, 2012)

VUM4 interneuron of embryonic abdominal segment 7

(Fontana and Crews, 2012)

northern blot

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage -- larval stage

(Cazzamali et al., 2003)

adult stage

head

(Cazzamali et al., 2003)

RNA-seq

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 16

ventral midline of embryo

(Fontana and Crews, 2012)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

located_in integral component of plasma membrane

inferred from direct assay

(Cazzamali et al., 2003)

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\CCAP-R in GBrowse 2

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\CCAP-R

View exonic expression by tissue for Dmel\CCAP-R

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

FBgn0039396

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

CG14547-RA;CG6111-RA

Flygut - An atlas of the Drosophila adult midgut

FBgn0039396

Images

FlyBase Wiki

Image Based Resources

Alleles, Insertions, and Transgenic Constructs

Classical and Insertion Alleles ( 21 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 5 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of CCAP-R

Transgenic constructs containing regulatory region of CCAP-R

Deletions and Duplications ( 0 )

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

viable

CCAP-R^{MI05804-GFSTF.1}

viable, with Dcr-2^UAS.cDa, Scer\GAL4^elav.PLu

CCAP-R^GD6276

viable, with Scer\GAL4^Mef2.PR

CCAP-R^GD6276

viable, with Scer\GAL4^pnr-MD237

viable, with Scer\GAL4^tin.CΔ4

CCAP-R^GD6276

Other Phenotypes

Allele

sleep defective | adult stage

CCAP-R^attP

Phenotype manifest in

Allele

Orthologs

Downloads

Download All DIOPT Orthologs

Download All OrthoDB Orthologs

Human Orthologs (via DIOPT v8.0)

Homo sapiens (Human) (14)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Hsap\NPSR1

9 of 15

Yes

Hsap\AVPR2

5 of 15

Yes

Hsap\AVPR1B

4 of 15

Yes

Hsap\AVPR1A

3 of 15

Yes

Hsap\OXTR

3 of 15

Yes

Hsap\GPR150

1 of 15

Yes

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Model Organism Orthologs (via DIOPT v8.0)

Mus musculus (laboratory mouse) (13)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Mmus\Npsr1

8 of 15

Yes

Mmus\Avpr2

5 of 15

Yes

Mmus\Avpr1a

3 of 15

Yes

Mmus\Avpr1b

3 of 15

Yes

Mmus\Oxtr

3 of 15

Yes

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Rattus norvegicus (Norway rat) (14)

Rnor\Npsr1

8 of 13

Yes

Rnor\Avpr1a

3 of 13

Yes

Rnor\Avpr1b

3 of 13

Yes

Rnor\Avpr2

3 of 13

Yes

Rnor\LOC100909648

2 of 13

Yes

Rnor\Oxtr

2 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Xenopus tropicalis (Western clawed frog) (6)

Xtro\npsr1

3 of 12

Yes

Xtro\oxtr

3 of 12

Yes

Xtro\avpr1b

2 of 12

Yes

Xtro\avpr1a

1 of 12

Yes

Xtro\avpr2.2

1 of 12

Yes

Xtro\avpr2

1 of 12

Yes

Danio rerio (Zebrafish) (19)

Drer\oxtr

5 of 15

Yes

Drer\oxtrl

5 of 15

Yes

Drer\avpr1aa

4 of 15

Yes

Drer\avpr1ab

4 of 15

Yes

Drer\avpr2ab

4 of 15

Yes

Drer\si:dkey-178o16.4

4 of 15

Yes

Drer\avpr2aa

3 of 15

Yes

Drer\avpr2l

2 of 15

Yes

Drer\gpr39

1 of 15

Yes

Drer\opn3

1 of 15

Yes

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Caenorhabditis elegans (Nematode, roundworm) (22)

Cele\ntr-1

4 of 15

Yes

Cele\ntr-2

3 of 15

Yes

Cele\C04C3.6

1 of 15

Yes

Cele\C50H11.13

1 of 15

Yes

Cele\C54E10.3

1 of 15

Yes

Cele\npr-18

1 of 15

Yes

Cele\ops-1

1 of 15

Yes

Cele\srv-17

1 of 15

Yes

Cele\srv-19

1 of 15

Yes

Cele\srv-21

1 of 15

Yes

Cele\srv-22

1 of 15

Yes

Cele\srv-24

1 of 15

Yes

Cele\srv-25

1 of 15

Yes

Cele\srv-26

1 of 15

Yes

Cele\srv-27

1 of 15

Yes

Cele\srv-28

1 of 15

Yes

Cele\srv-29

1 of 15

Yes

Cele\srv-30

1 of 15

Yes

Cele\srv-31

1 of 15

Yes

Cele\srv-32

1 of 15

Yes

Cele\T01B11.1

1 of 15

Yes

Cele\ZK863.1

1 of 15

Yes

Arabidopsis thaliana (thale-cress) (0)

No records found.

Saccharomyces cerevisiae (Brewer's yeast) (0)

No records found.

Schizosaccharomyces pombe (Fission yeast) (0)

No records found.

Ortholog(s) in Drosophila Species (via OrthoDB v9.1) ( EOG091908DE )

Organism

Common Name

Gene

AAA Syntenic Ortholog

Multiple Dmel Genes in this Orthologous Group

Drosophila suzukii

Spotted wing Drosophila

Drosophila simulans

Drosophila sechellia

Drosophila erecta

Drosophila yakuba

Drosophila ananassae

Drosophila pseudoobscura pseudoobscura

Dpse\GA27348

Drosophila persimilis

Dper\GL22022

Drosophila willistoni

Dwil\GK14383

Drosophila virilis

Dvir\GJ23325

Drosophila mojavensis

Dmoj\GI22912

Drosophila grimshawi

Dgri\GH18151

Orthologs in non-Drosophila Dipterans (via OrthoDB v9.1) ( EOG091506P9 )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Musca domestica

House fly

Mdoa\17016510

Glossina morsitans

Tsetse fly

Gmor\GMOY009062

Lucilia cuprina

Australian sheep blowfly

Lcup\FF38_10113

Aedes aegypti

Yellow fever mosquito

Aaeg\GPRVPR2

Aedes aegypti

Yellow fever mosquito

Aaeg\GPRVPR1

Anopheles darlingi

American malaria mosquito

Adar\ADAC006526

Anopheles darlingi

American malaria mosquito

Adar\ADAC006528

Culex quinquefasciatus

Southern house mosquito

Cqui\CPIJ006269

Orthologs in non-Dipteran Insects (via OrthoDB v9.1) ( EOG090W06U8 )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Bombyx mori

Silkmoth

Bmor\BGIBMGA014309

Bombyx mori

Silkmoth

Bmor\BGIBMGA010893

Bombyx mori

Silkmoth

Bmor\BGIBMGA010894

Danaus plexippus

Monarch butterfly

Dple\DPOGS211411-PA

Danaus plexippus

Monarch butterfly

Dple\DPOGS211412-PA

Heliconius melpomene

Postman butterfly

Hmel\HMEL007270

Heliconius melpomene

Postman butterfly

Hmel\HMEL014974

Heliconius melpomene

Postman butterfly

Hmel\HMEL008634

Apis florea

Little honeybee

Aflo\2467440260

Apis mellifera

Western honey bee

Amel\GB54316

Bombus impatiens

Common eastern bumble bee

Bimp\BIMP20572

Bombus terrestris

Buff-tailed bumblebee

Bter\15206241

Linepithema humile

Argentine ant

Lhum\LH17378

Megachile rotundata

Alfalfa leafcutting bee

Mrot\MROTU:000665

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG016000

Dendroctonus ponderosae

Mountain pine beetle

Dpod\YQE_07523

Tribolium castaneum

Red flour beetle

Tcas\TC013945

Pediculus humanus

Human body louse

Phum\PHUM157220

Rhodnius prolixus

Kissing bug

Rpro\RPRC001248

Rhodnius prolixus

Kissing bug

Rpro\RPRC012063

Cimex lectularius

Bed bug

Clec\CLEC012447

Cimex lectularius

Bed bug

Clec\CLEC005677

Cimex lectularius

Bed bug

Clec\CLEC007380

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI062442

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI081902

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_17896

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_11628

Orthologs in non-Insect Arthropods (via OrthoDB v9.1) ( EOG090X09R5 )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strigamia maritima

European centipede

Smar\SMAR008908

Ixodes scapularis

Black-legged tick

Isca\ISCW000563

Stegodyphus mimosarum

African social velvet spider

Smim\KFM64540.1

Stegodyphus mimosarum

African social velvet spider

Smim\KFM63466.1

Stegodyphus mimosarum

African social velvet spider

Smim\KFM67504.1

Tetranychus urticae

Two-spotted spider mite

Turt\tetur76g00040

Tetranychus urticae

Two-spotted spider mite

Turt\tetur35g00370

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_317355

Orthologs in non-Arthropod Metazoa (via OrthoDB v9.1) ( EOG091G0A5H )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_021292gn

Strongylocentrotus purpuratus

Purple sea urchin

Spur\Sp-Ccap/NpSLr

Gallus gallus

Domestic chicken

Ggal\NPSR1

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v8.0)

Drosophila melanogaster (Fruit fly) (7)

Gene Symbol

Score

Source

Alignment

1 of 10

1 of 10

1 of 10

1 of 10

1 of 10

1 of 10

1 of 10

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Model Summary Ribbon

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 1 )

Human Ortholog

Disease

Evidence

References

AVPR2; arginine vasopressin receptor 2

model of nephrogenic diabetes insipidus

IEA

(FlyBase, 2019-)

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Disease Associations of Human Orthologs (via DIOPT v8.0 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

NPSR1; neuropeptide S receptor 1

9 of 15

608595

ASTHMA-RELATED TRAITS, SUSCEPTIBILITY TO, 2

AVPR2; arginine vasopressin receptor 2

5 of 15

300538

nephrogenic diabetes insipidus

AVPR1B; arginine vasopressin receptor 1B

4 of 15

600264

AVPR1A; arginine vasopressin receptor 1A

3 of 15

600821

OXTR; oxytocin receptor

3 of 15

167055

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

esyN Network Diagram

Interactions Browser

View in Interactions Browser

Please see the Physical Interaction reports below for full details

protein-protein

Physical Interaction

Assay

References

CCAP-R - Akh

enzymatic study, inferred by author

(Park et al., 2002)

CCAP-R - CCAP

enzymatic study, inferred by author

(Park et al., 2002)

CCAP-R - Crz

enzymatic study, inferred by author

(Park et al., 2002)

Summary of Genetic Interactions

esyN Network Diagram

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

External Data

Linkouts

BioGRID - A database of protein and genetic interactions.

77556

DroID - A comprehensive database of gene and protein interactions.

FBgn0039396

InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.

2768688

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

External Data

Linkouts

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

3-89

Cytogenetic map

96F8-96F8

Sequence location

3R:25,923,499..25,956,270 [-]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

96F8-96F8

Limits computationally determined from genome sequence between P{PZ}l(3)rQ197^rQ197 and P{lacW}scrib^j7B3

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

3-89

(FlyBase, 2016)

3-87.1

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (13)

Bloomington

84600

TI{2A-GAL4}CCAP-R^2A-GAL4

29074

w¹¹¹⁸; Mi{ET1}CCAP-R^MB09926

31490

y¹ v¹; P{TRiP.JF01338}attP2

37975

y¹ w^*; Mi{MIC}CCAP-R^MI04741

40226

y¹ w^*; Mi{MIC}CCAP-R^MI05490

40788

y¹ w^*; Mi{MIC}CCAP-R^MI05804

84360

TI{2A-lexA::GAD}CCAP-R^2A-lexA/TM3, Sb¹

84457

w^*; TI{TI}CCAP-R^attP/TM3, Sb¹

63176

y¹ w^*; Mi{PT-GFSTF.1}CCAP-R^{MI05804-GFSTF.1}

VDRC

v102995

P{KK113043}VIE-260B

v14767

w¹¹¹⁸; P{GD6276}v14767

v14768

w¹¹¹⁸; P{GD6276}v14768

More stocks available...

Genomic Clones (39)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (10)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

Other clones

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0039396

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0039396

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

2768688

Antibody Information

Laboratory Generated Antibodies

Commercially Available Antibodies

Other Information

Relationship to Other Genes

Source for database identify of

Source for identity of: CCAP-R CcapR

(FlyBase, 2009-)

Source for database merge of

Source for merge of: CG6111 CG14547

(Cazzamali et al., 2003)

Source for merge of: CcapR anon-WO0170980.46 anon-WO0170980.47

(FlyBase, 1996-)

Additional comments

Symbol changed from 'CcapR' to 'CCAP-R' to match nomenclature of the ligand ('CCAP') and to reflect usage in the literature.

(FlyBase, 2009-)

Annotations CG6111 and CG14547 merged as CG33344 (which corresponds to CcapR) in release 3.2 of the genome annotation.

(FlyBase Genome Annotators, 2004)

Source for merge of CcapR anon-WO0170980.46 anon-WO0170980.47 was sequence comparison ( date:051113 ).

(FlyBase, 1996-)

Other Comments

Origin and Etymology

Discoverer

Etymology

Identification

External Crossreferences and Linkouts ( 39 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

2768688

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/Swiss-Prot - Manually annotated and reviewed records of protein sequence and functional information

Q868T3

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

A0A6F7SN88

Other crossreferences

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0039396

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

CCAP-R_1

Flygut - An atlas of the Drosophila adult midgut

FBgn0039396

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

2768688

iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)

TC013945

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

Dmel_CG33344

modMine - A data warehouse for the modENCODE project

FBgn0039396

Linkouts

BioGRID - A database of protein and genetic interactions.

77556

DroID - A comprehensive database of gene and protein interactions.

FBgn0039396

DRSC - Results frm RNAi screens

FBgn0039396

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

FBgn0039396

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

CG14547-RA;CG6111-RA

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0039396

FlyMine - An integrated database for Drosophila genomics

FBgn0039396

InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.

2768688

Synonyms and Secondary IDs (12)

Reported As

Symbol Synonym

CCAP receptor

(Veenstra et al., 2008)

CCAP-R

(FlyBase Genome Annotators, 2020, Kondo et al., 2020, FlyBase Genome Annotators, 2019-, Rao and Deng, 2019.10.23, Gene Disruption Project members, 2016-, Diao et al., 2015, Gene Disruption Project members, 2015-, Johnson et al., 2008)

CCAPR

(Kim et al., 2015)

CG14547

(Cazzamali et al., 2003)

CG33344

(Kondo et al., 2020, Yu et al., 2016, Keleman et al., 2009.8.5, Ni et al., 2008)

CG6111

(Nässel and Winther, 2010, Johnson et al., 2008, Hauser et al., 2006, Hauser et al., 2006, Inlow and Restifo, 2004, Cazzamali et al., 2003, Giot et al., 2003, Park et al., 2002, Tian et al., 2002, Hewes and Taghert, 2001, Hewes and Taghert, 2001.7.31, Vanden Broeck, 2001, Brody and Cravchik, 2000)

CcapR

(Crocker et al., 2016, Ashwal-Fluss et al., 2014, Younger et al., 2013, Caers et al., 2012, Japanese National Institute of Genetics, 2012.5.21)

DCCAPR

(Cazzamali et al., 2003)

anon-WO0170980.46

anon-WO0170980.47

Name Synonyms

CCAP receptor

(Johnson et al., 2008)

Cardioacceleratory peptide receptor

(Cazzamali et al., 2003)

Crustacean cardioactive peptide receptor

(Caers et al., 2012)

Secondary FlyBase IDs

FBgn0039397
FBgn0046531
FBgn0046532
FBgn0053344

Datasets (0)

Study focus (0)

Experimental Role

Project

Project Type

Title

References (65)

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