A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\CG7816

General Information
SymbolDmel\CG7816SpeciesD. melanogaster
NameAnnotation symbolCG7816
Feature typeprotein_coding_geneFlyBase IDFBgn0039714
Gene Model StatusCurrent Stock availability 9 publicly available
Genomic Location
Chromosome (arm)3RRecombination map
Cytogenetic map99C4-99C5Sequence location3R:25,689,423..25,694,618 [-]

Genomic Maps

GBrowse View Help
modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
This gene is referred to in FlyBase by the symbol Dmel\CG7816 (FBgn0039714). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: metal ion transmembrane transporter activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: transmembrane transport; metal ion transport. 6 alleles are reported. No phenotypic data is available. It has 9 annotated transcripts and 9 annotated polypeptides. Protein features are: Zinc/iron permease. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed during late larval stages, during early pupal stages, in adult male stages. Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval/adult midgut, larval Malpighian tubules, adult male reproductive system. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult hindgut, adult Malpighian tubules, adult heart, larval/adult fat body, adult salivary gland, adult female reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1630858_s_at completely aligns to an exonic region common to each of the 9 FlyBase-annotated transcript isoforms of CG7816. Gene sequence location is 3R:25689423..25694618.

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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2011_10
Controlled Vocabulary Terms
FB2012_01
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
99C4-99C5  
Limits computationally determined from genome sequence between P{PZ}ncd05884 and P{lacW}l(3)s2500s2500  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\CG7816 for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0310274 FBtr0085489 FBtr0114337 FBtr0091779 FBtr0089920 FBtr0089921 FBtr0303032 FBtr0089922 FBtr0089923 FBtr0089924 FBtr0303034 FBtr0303033 FBtr0089925 FBtr0110888 FBtr0301073 FBpp0099686 FBpp0301957 FBpp0292153 FBpp0088863 FBpp0088861 FBpp0292152 FBpp0292151 FBpp0088859 FBpp0088862 FBpp0088864 FBpp0088860 FBpp0110188 FBpp0290295 FBti0065669 FBti0044001 FBti0075213 FBti0105961 FBti0052253 FBti0075280 FBti0042169 FBti0067262 FBti0126351_2 FBti0126351_1 FBti0035947 FBti0065073 FBti0130150
Comments on Gene Model
DGC clone appears problematic (GH11142): unspliced intron
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0089923
  1531
  355
FBtr0089920
  1570
  355
FBtr0089922
  1492
  355
FBtr0089921
  1533
  355
FBtr0089925
  1821
  355
FBtr0089924
  1539
  355
FBtr0303032
  1476
  355
FBtr0303033
  1710
  355
FBtr0303034
  1639
  355
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0088862  
38.9  
355  
4.99  
FBpp0088859  
38.9  
355  
4.99  
FBpp0088861  
38.9  
355  
4.99  
FBpp0088860  
38.9  
355  
4.99  
FBpp0088864  
38.9  
355  
4.99  
FBpp0088863  
38.9  
355  
4.99  
FBpp0292151  
38.9  
355  
4.99  
FBpp0292152  
38.9  
355  
4.99  
FBpp0292153  
38.9  
355  
4.99  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Zinc/iron permease (IPR003689)
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view RpS8-RE RpS8-RC snoRNA:Or-CD8-RA snoRNA:Me28S-A2564-RA CG7816-RC CG7816-RE CG7816-RH CG7816-RD CG7816-RA CG7816-RG CG7816-RJ CG7816-RI CG7816-RF CG34133-RB CG34133-RC
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0039714


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0039714
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed during late larval stages, during early pupal stages, in adult male stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0039714 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 2076
embryo 02-04hr
 
 681
embryo 04-06hr
 
 906
embryo 06-08hr
 
 1504
embryo 08-10hr
 
 1465
embryo 10-12hr
 
 2205
embryo 12-14hr
 
 1568
embryo 14-16hr
 
 777
embryo 16-18hr
 
 904
embryo 18-20hr
 
 1365
embryo 20-22hr
 
 1764
embryo 22-24hr
 
 1679
larva L1
 
 1011
larva L2
 
 804
larva L3 12hr old
 
 1027
larva L3 puffstage 1-2
 
 2824
larva L3 puffstage 3-6
 
 5874
larva L3 puffstage 7-9
 
 8027
white prepupae new
 
 6139
white prepupae 12hr
 
 2891
white prepupae 24hr
 
 2522
pupae 2d postWPP
 
 2518
pupae 3d postWPP
 
 2189
pupae 4d postWPP
 
 2089
adult male 01day
 
 3980
adult male 05day
 
 4917
adult male 30day
 
 4251
adult female 01day
 
 1964
adult female 05day
 
 2528
adult female 30day
 
 2989
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (2076)
embryo 02-04hr
 (681)
embryo 04-06hr
 (906)
embryo 06-08hr
 (1504)
embryo 08-10hr
 (1465)
embryo 10-12hr
 (2205)
embryo 12-14hr
 (1568)
embryo 14-16hr
 (777)
embryo 16-18hr
 (904)
embryo 18-20hr
 (1365)
embryo 20-22hr
 (1764)
embryo 22-24hr
 (1679)
larva L1
 (1011)
larva L2
 (804)
larva L3 12hr old
 (1027)
larva L3 puffstage 1-2
 (2824)
larva L3 puffstage 3-6
 (5874)
larva L3 puffstage 7-9
 (8027)
white prepupae new
 (6139)
white prepupae 12hr
 (2891)
white prepupae 24hr
 (2522)
pupae 2d postWPP
 (2518)
pupae 3d postWPP
 (2189)
pupae 4d postWPP
 (2089)
adult male 01day
 (3980)
adult male 05day
 (4917)
adult male 30day
 (4251)
adult female 01day
 (1964)
adult female 05day
 (2528)
adult female 30day
 (2989)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (2076)
embryo 02-04hr
 
 681
embryo 04-06hr
 
 906
embryo 06-08hr
 1504
embryo 08-10hr
 1465
embryo 10-12hr
 (2205)
embryo 12-14hr
 (1568)
embryo 14-16hr
 
 777
embryo 16-18hr
 
 904
embryo 18-20hr
 
 1365
embryo 20-22hr
 (1764)
embryo 22-24hr
 (1679)
larva L1
 
 1011
larva L2
 
 804
larva L3 12hr old
 
 1027
larva L3 puffstage 1-2
 (2824)
larva L3 puffstage 3-6
 (5874)
larva L3 puffstage 7-9
 (8027)
white prepupae new
 (6139)
white prepupae 12hr
 (2891)
white prepupae 24hr
 (2522)
pupae 2d postWPP
 (2518)
pupae 3d postWPP
 (2189)
pupae 4d postWPP
 (2089)
adult male 01day
 (3980)
adult male 05day
 (4917)
adult male 30day
 (4251)
adult female 01day
 (1964)
adult female 05day
 (2528)
adult female 30day
 (2989)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 2076
embryo 02-04hr
 
 681
embryo 04-06hr
 
 906
embryo 06-08hr
 
 1504
embryo 08-10hr
 
 1465
embryo 10-12hr
 
 2205
embryo 12-14hr
 
 1568
embryo 14-16hr
 
 777
embryo 16-18hr
 
 904
embryo 18-20hr
 
 1365
embryo 20-22hr
 
 1764
embryo 22-24hr
 
 1679
larva L1
 
 1011
larva L2
 
 804
larva L3 12hr old
 
 1027
larva L3 puffstage 1-2
 
 2824
larva L3 puffstage 3-6
 
 5874
larva L3 puffstage 7-9
 
 8027
white prepupae new
 
 6139
white prepupae 12hr
 
 2891
white prepupae 24hr
 
 2522
pupae 2d postWPP
 
 2518
pupae 3d postWPP
 
 2189
pupae 4d postWPP
 
 2089
adult male 01day
 
 3980
adult male 05day
 
 4917
adult male 30day
 
 4251
adult female 01day
 
 1964
adult female 05day
 
 2528
adult female 30day
 
 2989
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 2076
embryo 02-04hr
 
 681
embryo 04-06hr
 
 906
embryo 06-08hr
 
 1504
embryo 08-10hr
 
 1465
embryo 10-12hr
 
 2205
embryo 12-14hr
 
 1568
embryo 14-16hr
 
 777
embryo 16-18hr
 
 904
embryo 18-20hr
 
 1365
embryo 20-22hr
 
 1764
embryo 22-24hr
 
 1679
larva L1
 
 1011
larva L2
 
 804
larva L3 12hr old
 
 1027
larva L3 puffstage 1-2
 
 2824
larva L3 puffstage 3-6
 
 5874
larva L3 puffstage 7-9
 
 8027
white prepupae new
 
 6139
white prepupae 12hr
 
 2891
white prepupae 24hr
 
 2522
pupae 2d postWPP
 
 2518
pupae 3d postWPP
 
 2189
pupae 4d postWPP
 
 2089
adult male 01day
 
 3980
adult male 05day
 
 4917
adult male 30day
 
 4251
adult female 01day
 
 1964
adult female 05day
 
 2528
adult female 30day
 
 2989
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0039714 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 2076
embryo 02-04hr
 
 681
embryo 04-06hr
 
 906
embryo 06-08hr
 
 1504
embryo 08-10hr
 
 1465
embryo 10-12hr
 
 2205
embryo 12-14hr
 
 1568
embryo 14-16hr
 
 777
embryo 16-18hr
 
 904
embryo 18-20hr
 
 1365
embryo 20-22hr
 
 1764
embryo 22-24hr
 
 1679
larva L1
 
 1011
larva L2
 
 804
larva L3 12hr old
 
 1027
larva L3 puffstage 1-2
 
 2824
larva L3 puffstage 3-6
 
 5874
larva L3 puffstage 7-9
 
 8027
white prepupae new
 
 6139
white prepupae 12hr
 
 2891
white prepupae 24hr
 
 2522
pupae 2d postWPP
 
 2518
pupae 3d postWPP
 
 2189
pupae 4d postWPP
 
 2089
adult male 01day
 
 3980
adult male 05day
 
 4917
adult male 30day
 
 4251
adult female 01day
 
 1964
adult female 05day
 
 2528
adult female 30day
 
 2989
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (2076)
embryo 02-04hr
 (681)
embryo 04-06hr
 (906)
embryo 06-08hr
 (1504)
embryo 08-10hr
 (1465)
embryo 10-12hr
 (2205)
embryo 12-14hr
 (1568)
embryo 14-16hr
 (777)
embryo 16-18hr
 (904)
embryo 18-20hr
 (1365)
embryo 20-22hr
 (1764)
embryo 22-24hr
 (1679)
larva L1
 (1011)
larva L2
 (804)
larva L3 12hr old
 (1027)
larva L3 puffstage 1-2
 (2824)
larva L3 puffstage 3-6
 (5874)
larva L3 puffstage 7-9
 (8027)
white prepupae new
 (6139)
white prepupae 12hr
 (2891)
white prepupae 24hr
 (2522)
pupae 2d postWPP
 (2518)
pupae 3d postWPP
 (2189)
pupae 4d postWPP
 (2089)
adult male 01day
 (3980)
adult male 05day
 (4917)
adult male 30day
 (4251)
adult female 01day
 (1964)
adult female 05day
 (2528)
adult female 30day
 (2989)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 2076
embryo 02-04hr
 
 681
embryo 04-06hr
 
 906
embryo 06-08hr
 1504
embryo 08-10hr
 1465
embryo 10-12hr
 2205
embryo 12-14hr
 1568
embryo 14-16hr
 
 777
embryo 16-18hr
 
 904
embryo 18-20hr
 
 1365
embryo 20-22hr
 1764
embryo 22-24hr
 1679
larva L1
 
 1011
larva L2
 
 804
larva L3 12hr old
 
 1027
larva L3 puffstage 1-2
 (2824)
larva L3 puffstage 3-6
 (5874)
larva L3 puffstage 7-9
 (8027)
white prepupae new
 (6139)
white prepupae 12hr
 (2891)
white prepupae 24hr
 (2522)
pupae 2d postWPP
 (2518)
pupae 3d postWPP
 2189
pupae 4d postWPP
 2089
adult male 01day
 (3980)
adult male 05day
 (4917)
adult male 30day
 (4251)
adult female 01day
 1964
adult female 05day
 (2528)
adult female 30day
 (2989)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 2076
embryo 02-04hr
 
 681
embryo 04-06hr
 
 906
embryo 06-08hr
 
 1504
embryo 08-10hr
 
 1465
embryo 10-12hr
 
 2205
embryo 12-14hr
 
 1568
embryo 14-16hr
 
 777
embryo 16-18hr
 
 904
embryo 18-20hr
 
 1365
embryo 20-22hr
 
 1764
embryo 22-24hr
 
 1679
larva L1
 
 1011
larva L2
 
 804
larva L3 12hr old
 
 1027
larva L3 puffstage 1-2
 
 2824
larva L3 puffstage 3-6
 
 5874
larva L3 puffstage 7-9
 
 8027
white prepupae new
 
 6139
white prepupae 12hr
 
 2891
white prepupae 24hr
 
 2522
pupae 2d postWPP
 
 2518
pupae 3d postWPP
 
 2189
pupae 4d postWPP
 
 2089
adult male 01day
 
 3980
adult male 05day
 
 4917
adult male 30day
 
 4251
adult female 01day
 
 1964
adult female 05day
 
 2528
adult female 30day
 
 2989
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 2076
embryo 02-04hr
 
 681
embryo 04-06hr
 
 906
embryo 06-08hr
 
 1504
embryo 08-10hr
 
 1465
embryo 10-12hr
 
 2205
embryo 12-14hr
 
 1568
embryo 14-16hr
 
 777
embryo 16-18hr
 
 904
embryo 18-20hr
 
 1365
embryo 20-22hr
 
 1764
embryo 22-24hr
 
 1679
larva L1
 
 1011
larva L2
 
 804
larva L3 12hr old
 
 1027
larva L3 puffstage 1-2
 
 2824
larva L3 puffstage 3-6
 
 5874
larva L3 puffstage 7-9
 
 8027
white prepupae new
 
 6139
white prepupae 12hr
 
 2891
white prepupae 24hr
 
 2522
pupae 2d postWPP
 
 2518
pupae 3d postWPP
 
 2189
pupae 4d postWPP
 
 2089
adult male 01day
 
 3980
adult male 05day
 
 4917
adult male 30day
 
 4251
adult female 01day
 
 1964
adult female 05day
 
 2528
adult female 30day
 
 2989
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0039714


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0039714
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval/adult midgut, larval Malpighian tubules, adult male reproductive system. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult hindgut, adult Malpighian tubules, adult heart, larval/adult fat body, adult salivary gland, adult female reproductive system, larval/adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0039714 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 66.775
Larval Midgut
 
 1308.5
Larval Hindgut
 
 312.2
Larval Malpighian Tubules
 
 558.1
Larval Fat Body
 
 191.9
Larval Salivary Gland
 
 82
Larval Trachea
 
 94.5
Larval Carcass
 
 164.95
Adult Head
 
 195.7
Adult Eye
 
 136.375
Adult Brain
 
 159
Adult Thoracic-Abdominal Ganglion
 
 135
Adult Crop
 
 172.4
Adult Midgut
 
 839.4
Adult Hindgut
 
 243.9
Adult Malpighian Tubules
 
 401.7
Adult Fat Body
 
 301.1
Adult Salivary Gland
 
 143.7
Adult Heart
 
 496.125
Adult VirginFemale Spermatheca
 
 253.1
Adult InseminatedFemale Spermatheca
 
 257
Adult Ovary
 
 245
Adult Testis
 
 900.4
Adult Male Accessory Gland
 
 508.4
Adult Carcass
 
 253.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 66.775
Larval Midgut
 (1308.5)
Larval Hindgut
 
 312.2
Larval Malpighian Tubules
 (558.1)
Larval Fat Body
 
 191.9
Larval Salivary Gland
 
 82
Larval Trachea
 
 94.5
Larval Carcass
 
 164.95
Adult Head
 
 195.7
Adult Eye
 
 136.375
Adult Brain
 
 159
Adult Thoracic-Abdominal Ganglion
 
 135
Adult Crop
 
 172.4
Adult Midgut
 (839.4)
Adult Hindgut
 
 243.9
Adult Malpighian Tubules
 
 401.7
Adult Fat Body
 
 301.1
Adult Salivary Gland
 
 143.7
Adult Heart
 
 496.125
Adult VirginFemale Spermatheca
 
 253.1
Adult InseminatedFemale Spermatheca
 
 257
Adult Ovary
 
 245
Adult Testis
 (900.4)
Adult Male Accessory Gland
 508.4
Adult Carcass
 
 253.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 66.775
Larval Midgut
 (1308.5)
Larval Hindgut
 
 312.2
Larval Malpighian Tubules
 
 558.1
Larval Fat Body
 
 191.9
Larval Salivary Gland
 
 82
Larval Trachea
 
 94.5
Larval Carcass
 
 164.95
Adult Head
 
 195.7
Adult Eye
 
 136.375
Adult Brain
 
 159
Adult Thoracic-Abdominal Ganglion
 
 135
Adult Crop
 
 172.4
Adult Midgut
 
 839.4
Adult Hindgut
 
 243.9
Adult Malpighian Tubules
 
 401.7
Adult Fat Body
 
 301.1
Adult Salivary Gland
 
 143.7
Adult Heart
 
 496.125
Adult VirginFemale Spermatheca
 
 253.1
Adult InseminatedFemale Spermatheca
 
 257
Adult Ovary
 
 245
Adult Testis
 
 900.4
Adult Male Accessory Gland
 
 508.4
Adult Carcass
 
 253.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 66.775
Larval Midgut
 
 1308.5
Larval Hindgut
 
 312.2
Larval Malpighian Tubules
 
 558.1
Larval Fat Body
 
 191.9
Larval Salivary Gland
 
 82
Larval Trachea
 
 94.5
Larval Carcass
 
 164.95
Adult Head
 
 195.7
Adult Eye
 
 136.375
Adult Brain
 
 159
Adult Thoracic-Abdominal Ganglion
 
 135
Adult Crop
 
 172.4
Adult Midgut
 
 839.4
Adult Hindgut
 
 243.9
Adult Malpighian Tubules
 
 401.7
Adult Fat Body
 
 301.1
Adult Salivary Gland
 
 143.7
Adult Heart
 
 496.125
Adult VirginFemale Spermatheca
 
 253.1
Adult InseminatedFemale Spermatheca
 
 257
Adult Ovary
 
 245
Adult Testis
 
 900.4
Adult Male Accessory Gland
 
 508.4
Adult Carcass
 
 253.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0039714 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 66.775
Larval Midgut
 
 1308.5
Larval Hindgut
 
 312.2
Larval Malpighian Tubules
 
 558.1
Larval Fat Body
 
 191.9
Larval Salivary Gland
 
 82
Larval Trachea
 
 94.5
Larval Carcass
 
 164.95
Adult Head
 
 195.7
Adult Eye
 
 136.375
Adult Brain
 
 159
Adult Thoracic-Abdominal Ganglion
 
 135
Adult Crop
 
 172.4
Adult Midgut
 
 839.4
Adult Hindgut
 
 243.9
Adult Malpighian Tubules
 
 401.7
Adult Fat Body
 
 301.1
Adult Salivary Gland
 
 143.7
Adult Heart
 
 496.125
Adult VirginFemale Spermatheca
 
 253.1
Adult InseminatedFemale Spermatheca
 
 257
Adult Ovary
 
 245
Adult Testis
 
 900.4
Adult Male Accessory Gland
 
 508.4
Adult Carcass
 
 253.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 66.775
Larval Midgut
 (1308.5)
Larval Hindgut
 
 312.2
Larval Malpighian Tubules
 558.1
Larval Fat Body
 
 191.9
Larval Salivary Gland
 
 82
Larval Trachea
 
 94.5
Larval Carcass
 
 164.95
Adult Head
 
 195.7
Adult Eye
 
 136.375
Adult Brain
 
 159
Adult Thoracic-Abdominal Ganglion
 
 135
Adult Crop
 
 172.4
Adult Midgut
 (839.4)
Adult Hindgut
 
 243.9
Adult Malpighian Tubules
 
 401.7
Adult Fat Body
 
 301.1
Adult Salivary Gland
 
 143.7
Adult Heart
 
 496.125
Adult VirginFemale Spermatheca
 
 253.1
Adult InseminatedFemale Spermatheca
 
 257
Adult Ovary
 
 245
Adult Testis
 (900.4)
Adult Male Accessory Gland
 508.4
Adult Carcass
 
 253.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 66.775
Larval Midgut
 1308.5
Larval Hindgut
 
 312.2
Larval Malpighian Tubules
 
 558.1
Larval Fat Body
 
 191.9
Larval Salivary Gland
 
 82
Larval Trachea
 
 94.5
Larval Carcass
 
 164.95
Adult Head
 
 195.7
Adult Eye
 
 136.375
Adult Brain
 
 159
Adult Thoracic-Abdominal Ganglion
 
 135
Adult Crop
 
 172.4
Adult Midgut
 
 839.4
Adult Hindgut
 
 243.9
Adult Malpighian Tubules
 
 401.7
Adult Fat Body
 
 301.1
Adult Salivary Gland
 
 143.7
Adult Heart
 
 496.125
Adult VirginFemale Spermatheca
 
 253.1
Adult InseminatedFemale Spermatheca
 
 257
Adult Ovary
 
 245
Adult Testis
 
 900.4
Adult Male Accessory Gland
 
 508.4
Adult Carcass
 
 253.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 66.775
Larval Midgut
 
 1308.5
Larval Hindgut
 
 312.2
Larval Malpighian Tubules
 
 558.1
Larval Fat Body
 
 191.9
Larval Salivary Gland
 
 82
Larval Trachea
 
 94.5
Larval Carcass
 
 164.95
Adult Head
 
 195.7
Adult Eye
 
 136.375
Adult Brain
 
 159
Adult Thoracic-Abdominal Ganglion
 
 135
Adult Crop
 
 172.4
Adult Midgut
 
 839.4
Adult Hindgut
 
 243.9
Adult Malpighian Tubules
 
 401.7
Adult Fat Body
 
 301.1
Adult Salivary Gland
 
 143.7
Adult Heart
 
 496.125
Adult VirginFemale Spermatheca
 
 253.1
Adult InseminatedFemale Spermatheca
 
 257
Adult Ovary
 
 245
Adult Testis
 
 900.4
Adult Male Accessory Gland
 
 508.4
Adult Carcass
 
 253.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 195.7
 
NA 
Eye
 
 136.375
 
NA 
Brain
 
 159
 
66.775 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 135
 
NA 
Crop
 
 172.4
 
1308.5 
Midgut
 
 839.4
 
312.2 
Hindgut
 
 243.9
 
558.1 
Malpighian Tubules
 
 401.7
 
191.9 
Fat Body
 
 301.1
 
82 
Salivary Gland
 
 143.7
 
NA 
Heart
 
 496.125
 
94.5 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 253.1
 
NA 
InseminatedFemale Spermatheca
 
 257
 
NA 
Ovary
 
 245
 
NA 
Testis
 
 900.4
 
NA 
Male Accessory Gland
 
 508.4
 
164.95 
Carcass
 
 253.3

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 5 )
For All Classical Alleles Show

Allele of CG7816ClassMutagenStocksKnown lesion
CG7816f003062 --
CG7816f028762 --
CG781631 Yes
CG7816f052051 --
CG7816MB00749
1 --
hide Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show

Allele of CG7816ClassMutagenStocksKnown lesion
CG7816GD3702 Yes
hide Aneuploid Aberrations
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
UAS construct
Insertions
Type of insertions
Name
Expression data
insertion of enhancer trap binary system
hide Gene Ontology: Function, Process & Cellular Component ( 5 unique terms )
hide Terms Based on Experimental Evidence ( 0 terms )
hide Terms Based on Predictions or Assertions ( 5 terms )
Molecular Function
CV term
References
Biological Process
CV term
References
Cellular Component
CV term
References
inferred from electronic annotation with InterPro:IPR003689
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Protein-protein
Interacting group
Assay
References
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Interacts with
Please look at the allele data for full details of the genetic interactions
CG7816 allele
Gene
References
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Linkouts
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
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hide Stocks Listed in FlyBase ( 9 )
Bloomington
Harvard
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 85 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
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Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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Source for database merge of
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Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Zinc/iron permease (IPR003689)
Linkouts
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
Name Synonym
Secondary FlyBase IDs
hide References ( 17 )
Research paper
Blanco et al., 2010, BMC Dev. Biol. 10: 94
Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812]
Lebo et al., 2009, BMC Genomics 10: 80
Somatic, germline and sex hierarchy regulated gene expression during Drosophila metamorphosis. [FBrf0207472]
Kim et al., 2005, Nature Immunology 6(2): 211--218
Downregulation of lipopolysaccharide response in Drosophila by negative crosstalk between the AP1 and NF-kappaB signaling modules. [FBrf0184193]
Smulders-Srinivasan and Lin, 2003, Genetics 165(4): 1971--1991
Screens for piwi suppressors in Drosophila identify dosage-dependent regulators of germline stem cell division. [FBrf0167655]
Supplementary material
Cammarato et al., 2011, PLoS ONE 6(4):
Table S1. Proteins & Peptides. [FBrf0214682]
The modENCODE Consortium, 2010, Science 330(6012):
DataS14: Gene co-expression clusters. [FBrf0213979]
Mummery-Widmer et al., 2009, Nature 458(7241):
Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase
Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center
RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327]
Bellen, 2006.11.6, Batch702.xml
Batch702.xml [FBrf0191798]
Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase.
Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms.
Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
Protein sequence record
Swiss-Prot Project Members, 2000.10.1, UniProtKB: Q9VAF0
HYPOTHETIAL PROTEIN CG7816. [FBrf0136208]
Computer file
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection.
Genomic mapping of Exelixis insertion collection. [FBrf0184340]
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation
FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.]
[Annotations performed at the Celera Jamboreee.] [FBrf0126705]