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Gene Dmel\CG7920

General Information
Symbol	Dmel\CG7920	Species	D. melanogaster
Name		Annotation symbol	CG7920
Feature type	protein_coding_gene	FlyBase ID	FBgn0039737
Gene Model Status	Current	Stock availability	6 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	99D1-99D1	Sequence location	3R:25,836,198..25,841,086 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG7920 (FBgn0039737). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: 4-hydroxybutyrate CoA-transferase activity. There is experimental evidence that it is involved in the biological process: neurogenesis. 11 alleles are reported. The phenotype of these alleles is annotated with: mesothoracic tergum. It has one annotated transcript and one annotated polypeptide. Protein features are: Acetyl-CoA hydrolase/transferase. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 12-24 hour embryonic stages, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: larval Malpighian tubules. Gene sequence location is 3R:25836198..25841086.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2011_10	References Knowles-Barley, 2011.8.24, BrainTrap expression curation. Controlled Vocabulary Terms day 42 of adulthood day 41 of adulthood day 30 of adulthood day 49 of adulthood day 17 of adulthood day 45 of adulthood day 6 of adulthood day 5 of adulthood day 8 of adulthood day 26 of adulthood day 21 of adulthood day 13 of adulthood day 25 of adulthood day 22 of adulthood day 20 of adulthood day 39 of adulthood day 7 of adulthood day 36 of adulthood day 11 of adulthood day 37 of adulthood day 27 of adulthood day 18 of adulthood day 19 of adulthood day 28 of adulthood day 9 of adulthood day 29 of adulthood adult heart day 40 of adulthood day 16 of adulthood day 24 of adulthood day 15 of adulthood day 33 of adulthood day 43 of adulthood day 47 of adulthood day 38 of adulthood day 32 of adulthood day 48 of adulthood day 35 of adulthood day 23 of adulthood day 12 of adulthood day 10 of adulthood day 31 of adulthood spermatozoon day 34 of adulthood day 44 of adulthood day 14 of adulthood male day 46 of adulthood
FB2012_01	Sequence features HFA16346 BKN33233
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 99D1-99D1   Limits computationally determined from genome sequence between P{PZ}ncd05884 and P{lacW}l(3)s2500s2500
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG7920 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG7920-RA FBtr0085603  NM_143505   1990   477
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG7920-PA   FBpp0084968   51.9   477   8.24     NP_651762   AAF56990
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Acetyl-CoA hydrolase/transferase (IPR003702)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA263239   AA697483   AA698906   AA699113   AA736092   AA736174   AA803816   AA803883   AA950420   AE014297 AAF56990   AI062045   AI062115   AI062993   AI064385   AI107682   AI107828   AI107933   AI108924   AI109066   AI110192   AI113411   AI113900   AI114122   AI135339   AI135524   AI238301   AI238817   AI238876   AI256910   AI257450   AI258654   AI258955   AI292612   AI292703   AI292819   AI293146   AI293262   AI295545   AI296283   AI387623   AI388625   AI388717   AI389043   AI389141   AI389696   AI389712   AI402503   AI402876   AI403130   AI403648   AI403882   AI403904   AI404345   AI404865   AI405018   AI405469   AI405576   AI405658   AI456756   AI513724   AI513845   AI514061   AI514106   AI517377   AI517543   AI517630   AI531933   AI532546   AI533001   AI533546   AI534360   AI534537   AI534891   AI542645   AI945058   AI945333   AW941387   AX201652   AX201653   AY069288 AAL39433   BE975374   BE977601   BF485619   BF486006   BF486677   BF487752   BF488268   BF489194   BF490445   BF491986   BF493284   BF494433   BF494874   BF495336   BF497820   BF498269   BF498460   BF499109   BF500065   BF504421   BF505205   BF505315   BF505542   BF506199   BF506329   BF506736   BG633446   BG634083   BG636850   BG637375   BG638812   BG640267   BI172286   BI235799   BI236549   BI237968   BI353440   BI366206   BI485261   BI486812   BI565049   BI568320   BI570165   BI571481   BI577620   BI581174   BI581523   BI581599   BI581625   BI581757   BI581807   BI582538   BI582589   BI582591   BI583856   BI584931   BI585723   BI586176   BI590797   BI591970   BI592908   BI593227   BI606323   BI607605   BI608763   BI610990   BI611564   BI611854   BI614974   BI615620   BI618228   BI619042   BI619861   BI621822   BI622764   BI622850   BI624269   BI624377   BI625415   BI625782   BI628893   BI630009   BI633069   BI636226   BI637037   BI639827   BZ748771   CK132197   CK657471   CK657781   CK658875   CK659272   CK661089   CK662337   CO156075   CO178382   CO187589   CO266582   CO282414   CO297925   CO301973   CO302248   CO326972   CO329948   CO338506   CO338549   CZ474595   CZ487485   EC062424   EC066949   EC071368   EC080564   EC081156   EC086910   EC205646   EC210937   EC215773   EC226850   EC234488   EC244925   EC246215   EC250754   EC261671   EC265339   EV574870   EV576114   EV580370   EV581361   EV582444   EV584749   EV596158   EV599330   EV599622   EV600259
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8IMJ8 Q9VAC1
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
mass spectroscopy Stage Tissue/Position (including subcellular localization) Reference day 5 of adulthood & male -- day 7 of adulthood & male   spermatozoon   (Dorus et al., 2006, Wasbrough et al., 2010) day 7 of adulthood -- day 49 of adulthood   adult heart   (Cammarato et al., 2011)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0039737    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0039737 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 12-24 hour embryonic stages, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0039737 expression level Developmental Stage   Expression Level embryo 00-02hr    7544 embryo 02-04hr    649 embryo 04-06hr    574 embryo 06-08hr    1459 embryo 08-10hr    2296 embryo 10-12hr    4532 embryo 12-14hr    4617 embryo 14-16hr    13312 embryo 16-18hr    17703 embryo 18-20hr    21795 embryo 20-22hr    24288 embryo 22-24hr    23295 larva L1    40938 larva L2    31108 larva L3 12hr old    41776 larva L3 puffstage 1-2    25115 larva L3 puffstage 3-6    11436 larva L3 puffstage 7-9    6404 white prepupae new    6923 white prepupae 12hr    16256 white prepupae 24hr    14085 pupae 2d postWPP    17699 pupae 3d postWPP    32056 pupae 4d postWPP    38694 adult male 01day    46691 adult male 05day    50170 adult male 30day    51998 adult female 01day    38924 adult female 05day    19176 adult female 30day    18700 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (7544) embryo 02-04hr  (649) embryo 04-06hr  (574) embryo 06-08hr  (1459) embryo 08-10hr  (2296) embryo 10-12hr  (4532) embryo 12-14hr  (4617) embryo 14-16hr  (13312) embryo 16-18hr  (17703) embryo 18-20hr  (21795) embryo 20-22hr  (24288) embryo 22-24hr  (23295) larva L1  (40938) larva L2  (31108) larva L3 12hr old  (41776) larva L3 puffstage 1-2  (25115) larva L3 puffstage 3-6  (11436) larva L3 puffstage 7-9  (6404) white prepupae new  (6923) white prepupae 12hr  (16256) white prepupae 24hr  (14085) pupae 2d postWPP  (17699) pupae 3d postWPP  (32056) pupae 4d postWPP  (38694) adult male 01day  (46691) adult male 05day  (50170) adult male 30day  (51998) adult female 01day  (38924) adult female 05day  (19176) adult female 30day  (18700) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (7544) embryo 02-04hr    649 embryo 04-06hr    574 embryo 06-08hr  1459 embryo 08-10hr  (2296) embryo 10-12hr  (4532) embryo 12-14hr  (4617) embryo 14-16hr  (13312) embryo 16-18hr  (17703) embryo 18-20hr  (21795) embryo 20-22hr  (24288) embryo 22-24hr  (23295) larva L1  (40938) larva L2  (31108) larva L3 12hr old  (41776) larva L3 puffstage 1-2  (25115) larva L3 puffstage 3-6  (11436) larva L3 puffstage 7-9  (6404) white prepupae new  (6923) white prepupae 12hr  (16256) white prepupae 24hr  (14085) pupae 2d postWPP  (17699) pupae 3d postWPP  (32056) pupae 4d postWPP  (38694) adult male 01day  (46691) adult male 05day  (50170) adult male 30day  (51998) adult female 01day  (38924) adult female 05day  (19176) adult female 30day  (18700) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    7544 embryo 02-04hr    649 embryo 04-06hr    574 embryo 06-08hr    1459 embryo 08-10hr    2296 embryo 10-12hr    4532 embryo 12-14hr    4617 embryo 14-16hr  (13312) embryo 16-18hr  (17703) embryo 18-20hr  (21795) embryo 20-22hr  (24288) embryo 22-24hr  (23295) larva L1  (40938) larva L2  (31108) larva L3 12hr old  (41776) larva L3 puffstage 1-2  (25115) larva L3 puffstage 3-6  (11436) larva L3 puffstage 7-9    6404 white prepupae new    6923 white prepupae 12hr  (16256) white prepupae 24hr  (14085) pupae 2d postWPP  (17699) pupae 3d postWPP  (32056) pupae 4d postWPP  (38694) adult male 01day  (46691) adult male 05day  (50170) adult male 30day  (51998) adult female 01day  (38924) adult female 05day  (19176) adult female 30day  (18700) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    7544 embryo 02-04hr    649 embryo 04-06hr    574 embryo 06-08hr    1459 embryo 08-10hr    2296 embryo 10-12hr    4532 embryo 12-14hr    4617 embryo 14-16hr    13312 embryo 16-18hr    17703 embryo 18-20hr    21795 embryo 20-22hr    24288 embryo 22-24hr    23295 larva L1    40938 larva L2    31108 larva L3 12hr old    41776 larva L3 puffstage 1-2    25115 larva L3 puffstage 3-6    11436 larva L3 puffstage 7-9    6404 white prepupae new    6923 white prepupae 12hr    16256 white prepupae 24hr    14085 pupae 2d postWPP    17699 pupae 3d postWPP    32056 pupae 4d postWPP    38694 adult male 01day    46691 adult male 05day    50170 adult male 30day    51998 adult female 01day    38924 adult female 05day    19176 adult female 30day    18700 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0039737 expression level Developmental Stage   Expression Level embryo 00-02hr    7544 embryo 02-04hr    649 embryo 04-06hr    574 embryo 06-08hr    1459 embryo 08-10hr    2296 embryo 10-12hr    4532 embryo 12-14hr    4617 embryo 14-16hr    13312 embryo 16-18hr    17703 embryo 18-20hr    21795 embryo 20-22hr    24288 embryo 22-24hr    23295 larva L1    40938 larva L2    31108 larva L3 12hr old    41776 larva L3 puffstage 1-2    25115 larva L3 puffstage 3-6    11436 larva L3 puffstage 7-9    6404 white prepupae new    6923 white prepupae 12hr    16256 white prepupae 24hr    14085 pupae 2d postWPP    17699 pupae 3d postWPP    32056 pupae 4d postWPP    38694 adult male 01day    46691 adult male 05day    50170 adult male 30day    51998 adult female 01day    38924 adult female 05day    19176 adult female 30day    18700 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (7544) embryo 02-04hr  (649) embryo 04-06hr  (574) embryo 06-08hr  (1459) embryo 08-10hr  (2296) embryo 10-12hr  (4532) embryo 12-14hr  (4617) embryo 14-16hr  (13312) embryo 16-18hr  (17703) embryo 18-20hr  (21795) embryo 20-22hr  (24288) embryo 22-24hr  (23295) larva L1  (40938) larva L2  (31108) larva L3 12hr old  (41776) larva L3 puffstage 1-2  (25115) larva L3 puffstage 3-6  (11436) larva L3 puffstage 7-9  (6404) white prepupae new  (6923) white prepupae 12hr  (16256) white prepupae 24hr  (14085) pupae 2d postWPP  (17699) pupae 3d postWPP  (32056) pupae 4d postWPP  (38694) adult male 01day  (46691) adult male 05day  (50170) adult male 30day  (51998) adult female 01day  (38924) adult female 05day  (19176) adult female 30day  (18700) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (7544) embryo 02-04hr    649 embryo 04-06hr    574 embryo 06-08hr  1459 embryo 08-10hr  2296 embryo 10-12hr  (4532) embryo 12-14hr  (4617) embryo 14-16hr  (13312) embryo 16-18hr  (17703) embryo 18-20hr  (21795) embryo 20-22hr  (24288) embryo 22-24hr  (23295) larva L1  (40938) larva L2  (31108) larva L3 12hr old  (41776) larva L3 puffstage 1-2  (25115) larva L3 puffstage 3-6  (11436) larva L3 puffstage 7-9  (6404) white prepupae new  (6923) white prepupae 12hr  (16256) white prepupae 24hr  (14085) pupae 2d postWPP  (17699) pupae 3d postWPP  (32056) pupae 4d postWPP  (38694) adult male 01day  (46691) adult male 05day  (50170) adult male 30day  (51998) adult female 01day  (38924) adult female 05day  (19176) adult female 30day  (18700) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    7544 embryo 02-04hr    649 embryo 04-06hr    574 embryo 06-08hr    1459 embryo 08-10hr    2296 embryo 10-12hr    4532 embryo 12-14hr    4617 embryo 14-16hr  13312 embryo 16-18hr  17703 embryo 18-20hr  (21795) embryo 20-22hr  (24288) embryo 22-24hr  (23295) larva L1  (40938) larva L2  (31108) larva L3 12hr old  (41776) larva L3 puffstage 1-2  (25115) larva L3 puffstage 3-6  11436 larva L3 puffstage 7-9    6404 white prepupae new    6923 white prepupae 12hr  16256 white prepupae 24hr  14085 pupae 2d postWPP  17699 pupae 3d postWPP  (32056) pupae 4d postWPP  (38694) adult male 01day  (46691) adult male 05day  (50170) adult male 30day  (51998) adult female 01day  (38924) adult female 05day  19176 adult female 30day  18700 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    7544 embryo 02-04hr    649 embryo 04-06hr    574 embryo 06-08hr    1459 embryo 08-10hr    2296 embryo 10-12hr    4532 embryo 12-14hr    4617 embryo 14-16hr    13312 embryo 16-18hr    17703 embryo 18-20hr    21795 embryo 20-22hr    24288 embryo 22-24hr    23295 larva L1    40938 larva L2    31108 larva L3 12hr old    41776 larva L3 puffstage 1-2    25115 larva L3 puffstage 3-6    11436 larva L3 puffstage 7-9    6404 white prepupae new    6923 white prepupae 12hr    16256 white prepupae 24hr    14085 pupae 2d postWPP    17699 pupae 3d postWPP    32056 pupae 4d postWPP    38694 adult male 01day    46691 adult male 05day    50170 adult male 30day    51998 adult female 01day    38924 adult female 05day    19176 adult female 30day    18700 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0039737    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0039737 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: larval Malpighian tubules. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Heatmap Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules no informative data Larval Fat Body no informative data Larval Salivary Gland no informative data Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain no informative data Adult Thoracic-Abdominal Ganglion no informative data Adult Crop no informative data Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary no informative data Adult Testis no informative data Adult Male Accessory Gland no informative data Adult Carcass no informative data modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_10
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039737 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG7920-RB;CG7920-RB;CG7920-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG7920 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 7-8 Stages(s) 9-10 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal, with Scer\GAL41407 CG7920GD10613 semi-lethal | pupal stage, with Scer\GAL4pnr-MD237 CG7920GD10613 Other Phenotypes Allele neuroanatomy defective | larval stage, with Scer\GAL41407 CG7920GD10613 visible, with Scer\GAL4pnr-MD237 CG7920GD10613 Phenotype manifest in Allele embryonic/larval neuroblast | larval stage, with Scer\GAL41407 CG7920GD10613 ganglion mother cell | larval stage, with Scer\GAL41407 CG7920GD10613 mesothoracic tergum, with Scer\GAL4pnr-MD237 CG7920GD10613
Classical Alleles ( 10 )
For All Classical Alleles Show
Allele of CG7920 Class Mutagen Stocks Known lesion CG7920d05544 P-element activity 1 -- CG7920d07778 1 -- CG7920EY00580 P-element activity 1 -- CG7920EY03483 1 -- CG7920f04899 piggyBac transposase 1 -- CG7920CB-0078-3 0 -- CG7920CPTI002166 piggyBac transposase 0 Yes CG7920EP3096 0 -- CG7920EP3130 0 -- CG7920GS-A828 Delta2-3 0 --
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG7920 Class Mutagen Stocks Known lesion CG7920GD10613 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)X3F (Cook, 2006.1.31)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD10613} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{RS3}CG7920CB-0078-3 NA PBac{681.P.FSVS-1}CG7920CPTI002166 NA PBac{WH}CG7920f04899 NA insertion of mobile activating element P{EP}CG7920EP3096 NA P{EP}CG7920EP3130 NA P{EPgy2}CG7920EY00580 NA P{EPgy2}CG7920EY03483 NA P{GSV1}CG7920GS-A828 NA P{XP}CG7920d05544 NA P{XP}CG7920d05928 NA P{XP}CG7920d07778 NA
Gene Ontology: Function, Process & Cellular Component ( 4 unique terms )
Terms Based on Experimental Evidence ( 2 terms )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
neurogenesis inferred from mutant phenotype (Neumüller et al., 2011)
Cellular Component
CV term Evidence References
lipid particle inferred from direct assay (Beller et al., 2006)
Terms Based on Predictions or Assertions ( 2 terms )
Molecular Function
CV term Evidence References
4-hydroxybutyrate CoA-transferase activity inferred from sequence or structural similarity with UniProtKB:P38942 (FlyBase, 1992-)
Biological Process
CV term Evidence References
acetyl-CoA metabolic process inferred from electronic annotation with InterPro:IPR003702 (FlyBase Curators et al., 2004-)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG7920 allele Gene References unspecified ct (Krupp et al., 2005) L (Singh et al., 2005)
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 68418 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0039737 DroID - A comprehensive database of gene and protein interactions. • FBgn0039737 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 43562
Orthologs
Genome-wide drosophilid orthologs	Dana\GF16210 Dere\GG11976 Dgri\GH22150 Dmoj\GI21964 Dper\GL13487 Dpse\GA20688 Dsec\GM12194 Dsim\GD17454 Dvir\GJ14323 Dwil\GK13373 Dyak\GE23426
Curated drosophilid orthologs	Dpse\GA20688   Dsim\GD17454
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL003746-PA Aedes aegypti (mosquito) AGAP004396-PA Anopheles gambiae (mosquito) XP_392705.2 Apis mellifera (honey bee) XP_001943025.1 Acyrthosiphon pisum (pea aphid) BGIBMGA014217-PA Bombyx mori (silk worm) CN01898 Caenorhabditis brenneri (small nematode) CBP02732 Caenorhabditis briggsae (nematode) CE32326 Caenorhabditis elegans (worm) CAGL0J04268g Candida glabrata (haploid yeast) JA00835 Caenorhabditis japonica (nematode) CPIJ003886 Culex pipens (mosquito) RP16013 Caenorhabditis remanei (nematode) 152183 Capitella spl (polychaete worm) DDB0233380 Dictyostelium discoideum (amoeba) 204077 Daphnia pulex (daphnia) 114851 Hypsipyla robusta (cedar shoot borer) ISCW023591-PA Ixodes scapularis (deer tick) KLLA0E10561g Kluyveromyces lactis (yeast) 234063 Lottia gigantea (owl limpet) 7153 Monocosta brevicollis (choanoflagellate) 237598 Nematostella vectensis (starlet anemone) XP_001601271.1 Nasonia vitripennis (wasp) PHUM003232-PA Pediculus humanus (human body louse) PP00184 Pristionchus pacificus (nematode) Smp_057060 Schistosoma mansoni (trematode parasite) SPAC1952.09c Schizosaccharomyces pombe (fission yeast) XP_969571.1 Tribolium castaneum (red flour beetle) 84088.m00314 Trichomonas vaginalis (parasitic flagellated protozoan) 85874.m00031 Trichomonas vaginalis (parasitic flagellated protozoan) 93909.m00117 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000058260 Xenopus tropicalis (frog) YALI0E30965g Yarrowia lipolytica (nonconventional yeast) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • ISCW023591 FBgn0240611 FBgn0215382 FBgn0201537 FBgn0068673 FBgn0167131 JGI_V11_331345 JGI_V11_204077 FBgn0080682 FBgn0151092 FBgn0144693 FBgn0129611 FBgn0104268 FBgn0093232 CPIJ003886 BGIBMGA014217 ACYPI001782 AGAP004396 AAEL003746 PHUM456180 GLEAN_12421
Stocks & Reagents
Stocks Listed in FlyBase ( 6 )
Bloomington	15648 y1 w67c23; P{EPgy2}CG7920EY03483 15298 y1 w67c23; P{EPgy2}CG7920EY00580/TM3, Sb1 Ser1
Harvard	- P{XP}CG7920d05544 - P{XP}CG7920d07778 - PBac{WH}CG7920f04899
VDRC	v21577 w1118; P{GD10613}v21577
Genomic Clones ( 1 )
	BACR07A18 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 204 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GM14349
Other clones	DPiM_GM14349
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT01606 AT03033 AT03640 AT04327 AT05775 AT07384 AT07519 AT07786 AT08611 AT08770 AT09293 AT12120 AT12652 AT12869 AT13602 AT14865 AT19713 AT20129 AT21161 AT22792 AT23501 AT25124 AT26911 AT28845 AT30140 GH01089 GH01191 GH04783 GH05494 GH05685 GH05832 GH07406 GH07576 GH09054 GH09726 GH10405 GH10812 GH13029 GH13323 GH14324 GH14937 GH15009 GH15555 GH15663 GH15820 GH16251 GH18192 GH19582 GH19704 GH20123 GH20238 GH20933 GH20950 GH21738 GH22206 GH22508 GH23131 GH23423 GH23449 GH24007 GH24713 GH24923 GH25477 GH25622 GH25740 GH26781 GH26941 GH27115 GH28304 GH28546 GH28668 GM10989 GM14520 GM23633 HL02594 HL08115 LP01896 LP02265 LP03641 LP05822 LP09212 LP10140 LP13530 LP16155 LP16922 LP20219 LP22458 LP24348 RE14614 RE31731 RE32620 RE51693 RE70283 RH04471 RH06612 RH09545 RH11196 RH13455 RH17046 RH18288 RH19016 RH19122 RH19152 RH20847 RH20850 RH22563 RH24269 RH25358 RH26028 RH39742 RH44481 RH45312 RH48828 RH50006 RH50987 RH53240 RH54680 RH57657 RH58960 RH62705 RH63804 RH63928 RH65828 RH66270 RH72645 RH74703 SD01157 SD03246 SD04086 SD04667 SD05414 SD07160 SD07427 SD09075 SD11244 SD14655 SD15363 SD17840 SD18925 SD22519 SD27040
Other clones	35881 45058 53558 55131 59409 76883 161102 174317 191790 572742 572784 bs08e04 bs11f01 bs41h07 bs66f03 CK01.39C.G6 CK01.71B.G12 CK01.113B.A4 CK01.130D.G3 Dmel_dig_002443_0610_3670 Dmel_dig_007805_0646_3210 Dmel_dig_008128_0658_1953 Dmel_dig_008677_0693_1462 Dmel_dig_012671_0702_3246 Dmel_dig_013202_0643_2960 Dmel_neb_007311_0884_3356 Dmel_neb_008095_0885_0953 Dmel_neb_012545_0620_1748 Dmel_neb_013667_0818_3128 EK030609 EK056560 EK146936 EK160424 EK170929 EK182816 EK183734 EK294228 EN07309 EN16955 EN17047 EP05061 GH02390 GH16412 GH27164 HL05918 HL07713 LD06337 LD30188 LD36877 LP23793 RE34315 RE68560 RE71330 RH02439 RH10726 RH17896 RH18521 RH19403 RH19616 RH20773 RH54776
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0039737 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 43562
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG7920 anon-WO0153538.36 anon-WO0153538.37 (FlyBase, 1996-)
Additional comments	Source for merge of CG7920 anon-WO0153538.36 anon-WO0153538.37 was sequence comparison (date:051113). (FlyBase, 1996-)
Other Comments
	Identified with: GH02390.5prime <up>FlyBase curator comment: EST subsequently found to be chimeric</up>. (Oliver, 2001.8.16) EST GH02390 is chimeric; the 5' portion corresponds to part of CG7920, the 3' portion matches part of AE003813 on the opposite strand to Pcf11. (FlyBase, 1996-)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_143505 RefSeq (Proteins) • NP_651762 DDBJ / EMBL / GenBank • AA803816 AAF56990 AAL39433 AAN14206 AI062993 AI113900 AI292703 AI945333 AW941387 AX201652 AX201653 AY069288 BZ748771 CZ474595 CZ487485 Entrez Gene - A searchable database of RefSeq genes. • 43562 UniProtKB/TrEMBL • Q8IMJ8 Q9VAC1
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Acetyl-CoA hydrolase/transferase (IPR003702)
Linkouts
	BioGRID - A database of protein and genetic interactions • 68418 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0039737 DroID - A comprehensive database of gene and protein interactions. • FBgn0039737 DRSC - Results from RNAi screens. • FBgn0039737 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039737 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG7920-RB;CG7920-RB;CG7920-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0039737 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 43562 InParanoid A subset of ortholog calls from InParanoid. • AAEL003746-PA Aedes aegypti (mosquito) AGAP004396-PA Anopheles gambiae (mosquito) XP_392705.2 Apis mellifera (honey bee) XP_001943025.1 Acyrthosiphon pisum (pea aphid) BGIBMGA014217-PA Bombyx mori (silk worm) CN01898 Caenorhabditis brenneri (small nematode) CBP02732 Caenorhabditis briggsae (nematode) CE32326 Caenorhabditis elegans (worm) CAGL0J04268g Candida glabrata (haploid yeast) JA00835 Caenorhabditis japonica (nematode) CPIJ003886 Culex pipens (mosquito) RP16013 Caenorhabditis remanei (nematode) 152183 Capitella spl (polychaete worm) DDB0233380 Dictyostelium discoideum (amoeba) 204077 Daphnia pulex (daphnia) 114851 Hypsipyla robusta (cedar shoot borer) ISCW023591-PA Ixodes scapularis (deer tick) KLLA0E10561g Kluyveromyces lactis (yeast) 234063 Lottia gigantea (owl limpet) 7153 Monocosta brevicollis (choanoflagellate) 237598 Nematostella vectensis (starlet anemone) XP_001601271.1 Nasonia vitripennis (wasp) PHUM003232-PA Pediculus humanus (human body louse) PP00184 Pristionchus pacificus (nematode) Smp_057060 Schistosoma mansoni (trematode parasite) SPAC1952.09c Schizosaccharomyces pombe (fission yeast) XP_969571.1 Tribolium castaneum (red flour beetle) 84088.m00314 Trichomonas vaginalis (parasitic flagellated protozoan) 85874.m00031 Trichomonas vaginalis (parasitic flagellated protozoan) 93909.m00117 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000058260 Xenopus tropicalis (frog) YALI0E30965g Yarrowia lipolytica (nonconventional yeast) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 43562 modMine - Data generated by the modENCODE project. • FBgn0039737 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • ISCW023591 FBgn0240611 FBgn0215382 FBgn0201537 FBgn0068673 FBgn0167131 JGI_V11_331345 JGI_V11_204077 FBgn0080682 FBgn0151092 FBgn0144693 FBgn0129611 FBgn0104268 FBgn0093232 CPIJ003886 BGIBMGA014217 ACYPI001782 AGAP004396 AAEL003746 PHUM456180 GLEAN_12421
Synonyms & Secondary IDs ( 7 )
Reported As
Symbol Synonym	anon-WO0153538.36   anon-WO0153538.37   BEST:GH02390   CG7920 (Beller et al., 2006, Reiter et al., 2007, Dorus et al., 2006, Gerbasi et al., 2010, Nair et al., 2007, Wasbrough et al., 2010, Cammarato et al., 2011) GH02390.5prime (Oliver, 2001.8.16) i130 (Battersby et al., 2003)
Name Synonym	4-hydroxybutyrate Co-A transferase (Nair et al., 2007)
Secondary FlyBase IDs
	FBgn0045917 FBgn0045918 FBgn0046309
References ( 31 )
Generate a list of	All references relating to this gene ( 31 )
List References by type	Research paper  ( 8 ) Supplementary material  ( 9 ) Personal communication to FlyBase  ( 6 ) FlyBase analysis  ( 3 ) Computer file  ( 3 ) Patent  ( 1 ) Curated genome annotation  ( 1 )
Recent research papers ( 1 )
	Gerbasi et al., 2010, Mol. Cell. Proteomics 9(9): 1866--1872 Proteomics Identification of Drosophila Small Interfering RNA-associated Factors. [FBrf0211707] Show all research papers ...