• Home
• Tools
  • Tools Overview
  • Query Tools

    
    • QuickSearch
    • QueryBuilder
    • TermLink
    • CytoSearch
    • Interactions Browser
    • ImageBrowse
    • Find A Person
    • Google™ FlyBase
  • Genomic/Map Tools

    
    • BLAST
    • GBrowse
    • CytoSearch
    • Aberrations Maps
    • Chromosome Maps
    • Coordinates Converter
  • Retrieve/Convert

    
    • Batch Download
    • Coordinates Converter
    • ID Converter
  • Data Submission

    
    • Fast-Track Your Paper
    • Submit Personal Comm
    • Add A New Person
    • Update Person Info
  • People

    
    • Find A Person
    • Add A New Person
    • Update Person Info
• Files
  • Files Overview
  • Downloads:
  • Precomputed files
  • Archived data
  • Releases (FTP)
  • Genomes (FTP)
  • AAA data (FTP)
  • Lists:
  • Transposons (Dmel)
  • Transposons (other)
  • Vectors & Constructs
  • Anatomical Terms
  • Map Conversion
• Species
  • Phylogeny
  • Sequenced Species
  • Synteny Table
  • Color Illustrations
  • Abbreviations
• Documents
  • About FlyBase
  • Reference Manual:
  • Sections
  • Contents
  • Nomenclature
  • Release Notes
• Resources
  • All Resources
  • Model Organisms
  • Stock Collections
  • Other links:
  • BDGP
  • DGRC
  • FlyExpress
  • Interactive Fly
  • modENCODE
  • Textpresso for Fly
• News
  • News
  • FlyBase Forum
  • FlyBase Positions
  • Meetings
  • Courses
  • Fly Board
  • White papers
  • Funding
  • bionet.dros
• Help
  • Google™ FlyBase
  • Site Map
  • FAQs
  • FlyBase Guides
  • Video Tutorials
  • Report help
  • New to Flies
  • Pers. comm.
  • Author guidelines
  • Contact FlyBase
• Archives
  • Prior Release
  • Other Archives
  • Coordinate Converter

Gene Dmel\CG9717

General Information
Symbol	Dmel\CG9717	Species	D. melanogaster
Name		Annotation symbol	CG9717
Feature type	protein_coding_gene	FlyBase ID	FBgn0039789
Gene Model Status	Current	Stock availability	3 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	99F10-99F10	Sequence location	3R:26,409,606..26,413,021 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG9717 (FBgn0039789). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: high affinity sulfate transmembrane transporter activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: transmembrane transport. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed within 18-24 hour embryonic stages, during early larval stages, during early pupal stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval/adult Malpighian tubules. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval midgut, adult salivary gland. Comments on Affy2 ProbeSet: ProbeSet 1626124_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG9717. Gene sequence location is 3R:26409606..26413021.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features BKN25570 HFA16543
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 99F10-99F10   Limits computationally determined from genome sequence between P{PZ}ncd05884 and P{lacW}l(3)s2500s2500
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG9717 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG9717-RA FBtr0085679  NM_143555   2812   638
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG9717-PA   FBpp0085041   69.4   638   8.18     NP_651812   AAG22176
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Sulphate transporter/antisigma-factor antagonist STAS (IPR002645) Sulphate transporter (IPR011547)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014297 AAG22176   AI517598   AI533733   AY070915 AAL48537   AY240026   BG639764   BI163169   BI363954   BI365510   BI569801   BI590538   BI592935   BI607161   CO188367   FD585702   FD585706   FD585721   FD585730   FD586529   FD586706   GH767513
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9I7H4
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0039789    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0039789 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed within 18-24 hour embryonic stages, during early larval stages, during early pupal stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0039789 expression level Developmental Stage   Expression Level embryo 00-02hr    2 embryo 02-04hr    15 embryo 04-06hr    4 embryo 06-08hr    4 embryo 08-10hr    10 embryo 10-12hr    26 embryo 12-14hr    53 embryo 14-16hr    292 embryo 16-18hr    662 embryo 18-20hr    1486 embryo 20-22hr    1682 embryo 22-24hr    2306 larva L1    1345 larva L2    2125 larva L3 12hr old    798 larva L3 puffstage 1-2    1030 larva L3 puffstage 3-6    754 larva L3 puffstage 7-9    940 white prepupae new    1598 white prepupae 12hr    1600 white prepupae 24hr    521 pupae 2d postWPP    787 pupae 3d postWPP    89 pupae 4d postWPP    1311 adult male 01day    788 adult male 05day    709 adult male 30day    793 adult female 01day    709 adult female 05day    357 adult female 30day    359 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    2 embryo 02-04hr    15 embryo 04-06hr    4 embryo 06-08hr    4 embryo 08-10hr    10 embryo 10-12hr    26 embryo 12-14hr    53 embryo 14-16hr  (292) embryo 16-18hr  (662) embryo 18-20hr  (1486) embryo 20-22hr  (1682) embryo 22-24hr  (2306) larva L1  (1345) larva L2  (2125) larva L3 12hr old  (798) larva L3 puffstage 1-2  (1030) larva L3 puffstage 3-6  (754) larva L3 puffstage 7-9  (940) white prepupae new  (1598) white prepupae 12hr  (1600) white prepupae 24hr  (521) pupae 2d postWPP  (787) pupae 3d postWPP    89 pupae 4d postWPP  (1311) adult male 01day  (788) adult male 05day  (709) adult male 30day  (793) adult female 01day  (709) adult female 05day  (357) adult female 30day  (359) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    2 embryo 02-04hr    15 embryo 04-06hr    4 embryo 06-08hr    4 embryo 08-10hr    10 embryo 10-12hr    26 embryo 12-14hr    53 embryo 14-16hr    292 embryo 16-18hr    662 embryo 18-20hr  1486 embryo 20-22hr  (1682) embryo 22-24hr  (2306) larva L1    1345 larva L2  (2125) larva L3 12hr old    798 larva L3 puffstage 1-2    1030 larva L3 puffstage 3-6    754 larva L3 puffstage 7-9    940 white prepupae new  (1598) white prepupae 12hr  (1600) white prepupae 24hr    521 pupae 2d postWPP    787 pupae 3d postWPP    89 pupae 4d postWPP    1311 adult male 01day    788 adult male 05day    709 adult male 30day    793 adult female 01day    709 adult female 05day    357 adult female 30day    359 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    2 embryo 02-04hr    15 embryo 04-06hr    4 embryo 06-08hr    4 embryo 08-10hr    10 embryo 10-12hr    26 embryo 12-14hr    53 embryo 14-16hr    292 embryo 16-18hr    662 embryo 18-20hr    1486 embryo 20-22hr    1682 embryo 22-24hr    2306 larva L1    1345 larva L2    2125 larva L3 12hr old    798 larva L3 puffstage 1-2    1030 larva L3 puffstage 3-6    754 larva L3 puffstage 7-9    940 white prepupae new    1598 white prepupae 12hr    1600 white prepupae 24hr    521 pupae 2d postWPP    787 pupae 3d postWPP    89 pupae 4d postWPP    1311 adult male 01day    788 adult male 05day    709 adult male 30day    793 adult female 01day    709 adult female 05day    357 adult female 30day    359 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    2 embryo 02-04hr    15 embryo 04-06hr    4 embryo 06-08hr    4 embryo 08-10hr    10 embryo 10-12hr    26 embryo 12-14hr    53 embryo 14-16hr    292 embryo 16-18hr    662 embryo 18-20hr    1486 embryo 20-22hr    1682 embryo 22-24hr    2306 larva L1    1345 larva L2    2125 larva L3 12hr old    798 larva L3 puffstage 1-2    1030 larva L3 puffstage 3-6    754 larva L3 puffstage 7-9    940 white prepupae new    1598 white prepupae 12hr    1600 white prepupae 24hr    521 pupae 2d postWPP    787 pupae 3d postWPP    89 pupae 4d postWPP    1311 adult male 01day    788 adult male 05day    709 adult male 30day    793 adult female 01day    709 adult female 05day    357 adult female 30day    359 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0039789 expression level Developmental Stage   Expression Level embryo 00-02hr    2 embryo 02-04hr    15 embryo 04-06hr    4 embryo 06-08hr    4 embryo 08-10hr    10 embryo 10-12hr    26 embryo 12-14hr    53 embryo 14-16hr    292 embryo 16-18hr    662 embryo 18-20hr    1486 embryo 20-22hr    1682 embryo 22-24hr    2306 larva L1    1345 larva L2    2125 larva L3 12hr old    798 larva L3 puffstage 1-2    1030 larva L3 puffstage 3-6    754 larva L3 puffstage 7-9    940 white prepupae new    1598 white prepupae 12hr    1600 white prepupae 24hr    521 pupae 2d postWPP    787 pupae 3d postWPP    89 pupae 4d postWPP    1311 adult male 01day    788 adult male 05day    709 adult male 30day    793 adult female 01day    709 adult female 05day    357 adult female 30day    359 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    2 embryo 02-04hr    15 embryo 04-06hr    4 embryo 06-08hr    4 embryo 08-10hr    10 embryo 10-12hr    26 embryo 12-14hr    53 embryo 14-16hr  (292) embryo 16-18hr  (662) embryo 18-20hr  (1486) embryo 20-22hr  (1682) embryo 22-24hr  (2306) larva L1  (1345) larva L2  (2125) larva L3 12hr old  (798) larva L3 puffstage 1-2  (1030) larva L3 puffstage 3-6  (754) larva L3 puffstage 7-9  (940) white prepupae new  (1598) white prepupae 12hr  (1600) white prepupae 24hr  (521) pupae 2d postWPP  (787) pupae 3d postWPP    89 pupae 4d postWPP  (1311) adult male 01day  (788) adult male 05day  (709) adult male 30day  (793) adult female 01day  (709) adult female 05day  (357) adult female 30day  (359) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    2 embryo 02-04hr    15 embryo 04-06hr    4 embryo 06-08hr    4 embryo 08-10hr    10 embryo 10-12hr    26 embryo 12-14hr    53 embryo 14-16hr    292 embryo 16-18hr    662 embryo 18-20hr  1486 embryo 20-22hr  1682 embryo 22-24hr  2306 larva L1    1345 larva L2  2125 larva L3 12hr old    798 larva L3 puffstage 1-2    1030 larva L3 puffstage 3-6    754 larva L3 puffstage 7-9    940 white prepupae new  1598 white prepupae 12hr  1600 white prepupae 24hr    521 pupae 2d postWPP    787 pupae 3d postWPP    89 pupae 4d postWPP    1311 adult male 01day    788 adult male 05day    709 adult male 30day    793 adult female 01day    709 adult female 05day    357 adult female 30day    359 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    2 embryo 02-04hr    15 embryo 04-06hr    4 embryo 06-08hr    4 embryo 08-10hr    10 embryo 10-12hr    26 embryo 12-14hr    53 embryo 14-16hr    292 embryo 16-18hr    662 embryo 18-20hr    1486 embryo 20-22hr    1682 embryo 22-24hr    2306 larva L1    1345 larva L2    2125 larva L3 12hr old    798 larva L3 puffstage 1-2    1030 larva L3 puffstage 3-6    754 larva L3 puffstage 7-9    940 white prepupae new    1598 white prepupae 12hr    1600 white prepupae 24hr    521 pupae 2d postWPP    787 pupae 3d postWPP    89 pupae 4d postWPP    1311 adult male 01day    788 adult male 05day    709 adult male 30day    793 adult female 01day    709 adult female 05day    357 adult female 30day    359 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    2 embryo 02-04hr    15 embryo 04-06hr    4 embryo 06-08hr    4 embryo 08-10hr    10 embryo 10-12hr    26 embryo 12-14hr    53 embryo 14-16hr    292 embryo 16-18hr    662 embryo 18-20hr    1486 embryo 20-22hr    1682 embryo 22-24hr    2306 larva L1    1345 larva L2    2125 larva L3 12hr old    798 larva L3 puffstage 1-2    1030 larva L3 puffstage 3-6    754 larva L3 puffstage 7-9    940 white prepupae new    1598 white prepupae 12hr    1600 white prepupae 24hr    521 pupae 2d postWPP    787 pupae 3d postWPP    89 pupae 4d postWPP    1311 adult male 01day    788 adult male 05day    709 adult male 30day    793 adult female 01day    709 adult female 05day    357 adult female 30day    359 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0039789    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0039789 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval/adult Malpighian tubules. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval midgut, adult salivary gland. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0039789 expression level Tissue   Expression Level Larval Central Nervous System    1.3 Larval Midgut    168.1 Larval Hindgut    15.5 Larval Malpighian Tubules    1222.1 Larval Fat Body    4.5 Larval Salivary Gland    4.3 Larval Trachea no informative data Larval Carcass    36.425 Adult Head    113 Adult Eye    251.2 Adult Brain    1.2 Adult Thoracic-Abdominal Ganglion    2.8 Adult Crop    35.6 Adult Midgut no informative data Adult Hindgut    4.7 Adult Malpighian Tubules    1989.8 Adult Fat Body    6.8 Adult Salivary Gland    229.3 Adult Heart no informative data Adult VirginFemale Spermatheca    6.3 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    2.4 Adult Testis    3 Adult Male Accessory Gland    0.8 Adult Carcass    54.7 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    1.3 Larval Midgut    168.1 Larval Hindgut    15.5 Larval Malpighian Tubules  (1222.1) Larval Fat Body    4.5 Larval Salivary Gland    4.3 Larval Trachea no informative data Larval Carcass    36.425 Adult Head    113 Adult Eye    251.2 Adult Brain    1.2 Adult Thoracic-Abdominal Ganglion    2.8 Adult Crop    35.6 Adult Midgut no informative data Adult Hindgut    4.7 Adult Malpighian Tubules  (1989.8) Adult Fat Body    6.8 Adult Salivary Gland    229.3 Adult Heart no informative data Adult VirginFemale Spermatheca    6.3 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    2.4 Adult Testis    3 Adult Male Accessory Gland    0.8 Adult Carcass    54.7 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    1.3 Larval Midgut    168.1 Larval Hindgut    15.5 Larval Malpighian Tubules  (1222.1) Larval Fat Body    4.5 Larval Salivary Gland    4.3 Larval Trachea no informative data Larval Carcass    36.425 Adult Head    113 Adult Eye    251.2 Adult Brain    1.2 Adult Thoracic-Abdominal Ganglion    2.8 Adult Crop    35.6 Adult Midgut no informative data Adult Hindgut    4.7 Adult Malpighian Tubules  (1989.8) Adult Fat Body    6.8 Adult Salivary Gland    229.3 Adult Heart no informative data Adult VirginFemale Spermatheca    6.3 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    2.4 Adult Testis    3 Adult Male Accessory Gland    0.8 Adult Carcass    54.7 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    1.3 Larval Midgut    168.1 Larval Hindgut    15.5 Larval Malpighian Tubules    1222.1 Larval Fat Body    4.5 Larval Salivary Gland    4.3 Larval Trachea no informative data Larval Carcass    36.425 Adult Head    113 Adult Eye    251.2 Adult Brain    1.2 Adult Thoracic-Abdominal Ganglion    2.8 Adult Crop    35.6 Adult Midgut no informative data Adult Hindgut    4.7 Adult Malpighian Tubules    1989.8 Adult Fat Body    6.8 Adult Salivary Gland    229.3 Adult Heart no informative data Adult VirginFemale Spermatheca    6.3 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    2.4 Adult Testis    3 Adult Male Accessory Gland    0.8 Adult Carcass    54.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0039789 expression level Tissue   Expression Level Larval Central Nervous System    1.3 Larval Midgut    168.1 Larval Hindgut    15.5 Larval Malpighian Tubules    1222.1 Larval Fat Body    4.5 Larval Salivary Gland    4.3 Larval Trachea no informative data Larval Carcass    36.425 Adult Head    113 Adult Eye    251.2 Adult Brain    1.2 Adult Thoracic-Abdominal Ganglion    2.8 Adult Crop    35.6 Adult Midgut no informative data Adult Hindgut    4.7 Adult Malpighian Tubules    1989.8 Adult Fat Body    6.8 Adult Salivary Gland    229.3 Adult Heart no informative data Adult VirginFemale Spermatheca    6.3 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    2.4 Adult Testis    3 Adult Male Accessory Gland    0.8 Adult Carcass    54.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    1.3 Larval Midgut    168.1 Larval Hindgut    15.5 Larval Malpighian Tubules  (1222.1) Larval Fat Body    4.5 Larval Salivary Gland    4.3 Larval Trachea no informative data Larval Carcass    36.425 Adult Head    113 Adult Eye    251.2 Adult Brain    1.2 Adult Thoracic-Abdominal Ganglion    2.8 Adult Crop    35.6 Adult Midgut no informative data Adult Hindgut    4.7 Adult Malpighian Tubules  (1989.8) Adult Fat Body    6.8 Adult Salivary Gland    229.3 Adult Heart no informative data Adult VirginFemale Spermatheca    6.3 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    2.4 Adult Testis    3 Adult Male Accessory Gland    0.8 Adult Carcass    54.7 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    1.3 Larval Midgut    168.1 Larval Hindgut    15.5 Larval Malpighian Tubules  1222.1 Larval Fat Body    4.5 Larval Salivary Gland    4.3 Larval Trachea no informative data Larval Carcass    36.425 Adult Head    113 Adult Eye    251.2 Adult Brain    1.2 Adult Thoracic-Abdominal Ganglion    2.8 Adult Crop    35.6 Adult Midgut no informative data Adult Hindgut    4.7 Adult Malpighian Tubules  (1989.8) Adult Fat Body    6.8 Adult Salivary Gland    229.3 Adult Heart no informative data Adult VirginFemale Spermatheca    6.3 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    2.4 Adult Testis    3 Adult Male Accessory Gland    0.8 Adult Carcass    54.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    1.3 Larval Midgut    168.1 Larval Hindgut    15.5 Larval Malpighian Tubules    1222.1 Larval Fat Body    4.5 Larval Salivary Gland    4.3 Larval Trachea no informative data Larval Carcass    36.425 Adult Head    113 Adult Eye    251.2 Adult Brain    1.2 Adult Thoracic-Abdominal Ganglion    2.8 Adult Crop    35.6 Adult Midgut no informative data Adult Hindgut    4.7 Adult Malpighian Tubules    1989.8 Adult Fat Body    6.8 Adult Salivary Gland    229.3 Adult Heart no informative data Adult VirginFemale Spermatheca    6.3 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    2.4 Adult Testis    3 Adult Male Accessory Gland    0.8 Adult Carcass    54.7 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea no informative data Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut no informative data Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart no informative data Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca no informative data Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    113   NA  Eye    251.2   NA  Brain    1.2   1.3  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    2.8   NA  Crop    35.6   168.1  Midgut    no informative data   15.5  Hindgut    4.7   1222.1  Malpighian Tubules    1989.8   4.5  Fat Body    6.8   4.3  Salivary Gland    229.3   NA  Heart    no informative data   no informative data  Trachea    NA   NA  VirginFemale Spermatheca    6.3   NA  InseminatedFemale Spermatheca    no informative data   NA  Ovary    2.4   NA  Testis    3   NA  Male Accessory Gland    0.8   36.425  Carcass    54.7 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_18
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039789 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG9717-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG9717 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG9717GD3132 Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of CG9717 Class Mutagen Stocks Known lesion CG9717MB03722 1 --
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG9717 Class Mutagen Stocks Known lesion CG9717GD3132 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel7378 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD3132} NA
Insertions
	Type of insertions Name Expression data insertion of enhancer trap binary system Mi{ET1}CG9717MB03722 No
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
high affinity sulfate transmembrane transporter activity inferred from sequence or structural similarity with NCBI_gi:4557539 (FlyBase, 1992-)
Biological Process
CV term Evidence References
transmembrane transport inferred from electronic annotation with InterPro:IPR011547 (FlyBase Curators et al., 2004-)
Cellular Component
CV term Evidence References
integral to membrane inferred from electronic annotation with InterPro:IPR011547 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG9717 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0039789 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 43636
Orthologs
Genome-wide drosophilid orthologs	Dana\GF23321 Dere\GG11924 Dgri\GH14116 Dmoj\GI10643 Dpse\GA21986 Dsec\GM12143 Dsim\GD16947 Dvir\GJ23000 Dwil\GK13120 Dyak\GE23374
Curated drosophilid orthologs	Dpse\GA21986
Linkouts	OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV13923 LH24723 FBgn0240700 FBgn0240567 FBgn0224465 FBgn0215129 FBgn0210102 FBgn0192588 FBgn0188526 FBgn0181486 FBgn0167084 JGI_V11_220700 JGI_V11_310695 JGI_V11_225749 JGI_V11_198492 JGI_V11_321675 JGI_V11_223140 FBgn0081971 FBgn0080019 FBgn0151608 FBgn0151395 FBgn0146713 FBgn0133407 FBgn0013953 FBgn0121592 FBgn0104219 FBgn0103626 FBgn0100315 FBgn0094014 CPIJ005331 CPIJ012147 CPIJ019564 BGIBMGA003964 AGAP012302 AGAP002331 AAEL015249 AAEL006372 AAEL005160 PB24448 PHUM196660 GLEAN_05389 GLEAN_05388
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
Bloomington	24523 w1118; Mi{ET1}CG9717MB03722
VDRC	v42669 w1118; P{GD3132}v42669 v42670 w1118; P{GD3132}v42670/CyO
Genomic Clones ( 2 )
	BACR12J15 BACR48G16 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 17 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE02508
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH28623 RE48950 RE50850 RH01955 RH04172 RH10764 RH74167
Other clones	EK039362 RM03495 RM03795 RM03895 RM03995 RM04095 RM04195 RP001040774 SD05675
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0039789 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 43636
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_143555 RefSeq (Proteins) • NP_651812 DDBJ / EMBL / GenBank • AAG22176 AAL48537 AY070915 AY240026 BI163169 Entrez Gene - A searchable database of RefSeq genes. • 43636 UniProtKB/TrEMBL • Q9I7H4
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Sulphate transporter/antisigma-factor antagonist STAS (IPR002645) Sulphate transporter (IPR011547)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0039789 DRSC - Results from RNAi screens. • FBgn0039789 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039789 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG9717-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0039789 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 43636 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 43636 modMine - Data generated by the modENCODE project. • FBgn0039789 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV13923 LH24723 FBgn0240700 FBgn0240567 FBgn0224465 FBgn0215129 FBgn0210102 FBgn0192588 FBgn0188526 FBgn0181486 FBgn0167084 JGI_V11_220700 JGI_V11_310695 JGI_V11_225749 JGI_V11_198492 JGI_V11_321675 JGI_V11_223140 FBgn0081971 FBgn0080019 FBgn0151608 FBgn0151395 FBgn0146713 FBgn0133407 FBgn0013953 FBgn0121592 FBgn0104219 FBgn0103626 FBgn0100315 FBgn0094014 CPIJ005331 CPIJ012147 CPIJ019564 BGIBMGA003964 AGAP012302 AGAP002331 AAEL015249 AAEL006372 AAEL005160 PB24448 PHUM196660 GLEAN_05389 GLEAN_05388
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG9717 (Ayroles et al., 2009)
Name Synonym
Secondary FlyBase IDs
References ( 13 )
Research paper	Ayroles et al., 2009, Nature Genetics 41(3): 299--307 Systems genetics of complex traits in Drosophila melanogaster. [FBrf0206705] Page et al., 2005, EMBO J. 24(24): 4304--4315 Spotted-dick, a zinc-finger protein of Drosophila required for expression of Orc4 and S phase. [FBrf0190363]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase	BDGP TI submission, 2007.10.9, batch761.xml batch761.xml [FBrf0200260] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]
Curated genome annotation	Yao, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126699]