• Home
• Tools
  • Tools Overview
  • Query Tools

    
    • QuickSearch
    • QueryBuilder
    • TermLink
    • CytoSearch
    • RNA-Seq Search
    • Interactions Browser
    • ImageBrowse
    • Find A Person
    • Google™ FlyBase
  • Genomic/Map Tools

    
    • BLAST
    • GBrowse
    • GBrowse 2 Beta
    • CytoSearch
    • Feature Mapper
    • Aberrations Maps
    • Chromosome Maps
    • Coordinates Converter
  • Retrieve/Convert

    
    • Batch Download
    • Coordinates Converter
    • ID Converter
  • Data Submission

    
    • Fast-Track Your Paper
    • Submit Personal Comm
    • Add A New Person
    • Update Person Info
  • People

    
    • Find A Person
    • Add A New Person
    • Update Person Info
• Files
  • Files Overview
  • Current release
  • Archived releases
  • Map Conversion
  • FTP site:
  • Releases (FTP)
  • Genomes (FTP)
• Species
  • Phylogeny
  • Sequenced Species
  • Synteny Table
  • Color Illustrations
  • Abbreviations
• Documents
  • About FlyBase
  • Reference Manual:
  • Sections
  • Contents
  • Nomenclature
  • Release Notes
• Resources
  • All Resources
  • Model Organisms
  • Stock Collections
  • Vectors & Constructs
  • Other links:
  • BDGP
  • DGRC
  • DIS by issue
  • FlyExpress
  • Interactive Fly
  • modENCODE
  • Textpresso for Fly
• News
  • News
  • FlyBase Forum
  • FlyBase Positions
  • Meetings
  • Courses
  • Fly Board
  • White papers
  • Funding
  • bionet.dros
• Help
  • Google™ FlyBase
  • Site Map
  • FAQs
  • FlyBase Guides
  • Video Tutorials
  • Report help
  • New to Flies
  • Pers. comm.
  • Author guidelines
  • Contact FlyBase
• Archives
  • Prior Release
  • Other Archives
  • Coordinate Converter

Gene Dmel\CG3669

General Information
Symbol	Dmel\CG3669	Species	D. melanogaster
Name		Annotation symbol	CG3669
Feature type	protein_coding_gene	FlyBase ID	FBgn0039838
Gene Model Status	Current	Stock availability	4 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	100B9-100B9	Sequence location	3R:27,083,321..27,085,771 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG3669 (FBgn0039838). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: carbonate dehydratase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: one-carbon metabolic process. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Alpha carbonic anhydrase; Carbonic anhydrase, alpha-class; Carbonic anhydrase, alpha-class, conserved site. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of low expression to a trough of no expression detected. Peak expression observed within 12-18 embryonic stages, during early larval stages. Summary of FlyAtlas Anatomical Expression Data: No expression detected in any larval or adult organs/tissues. Comments on Affy2 ProbeSet: ProbeSet 1641591_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG3669. Gene sequence location is 3R:27083321..27085771.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 100B9-100B9   Limits computationally determined from genome sequence between P{PZ}Aph-407028&P{PZ}dcorK215 and P{PZ}l(3)rM731rM731
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG3669 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.44 Gene model reviewed during 5.47
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG3669-RB FBtr0113313  NM_001104517   1101   298
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG3669-PB   FBpp0112225   33.5   298   10.21     NP_001097987   AAF57140
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Alpha carbonic anhydrase (IPR001148) Carbonic anhydrase, alpha-class, conserved site (IPR018338) Carbonic anhydrase, alpha-class (IPR023561)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014297 AAF57140   CO283141   CO321393   EC234105
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9V9Y8
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: No expression detected in any larval or adult organs/tissues. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    0.475 Larval Midgut    1.1 Larval Hindgut    1.8 Larval Malpighian Tubules    1.6 Larval Fat Body    4.7 Larval Salivary Gland    1 Larval Trachea    0.275 Larval Carcass    1.3 Adult Head    1.2 Adult Eye    1.875 Adult Brain    1 Adult Thoracic-Abdominal Ganglion    0.9 Adult Crop    2 Adult Midgut    1.3 Adult Hindgut    0.6 Adult Malpighian Tubules    1.6 Adult Fat Body    1.2 Adult Salivary Gland    2.1 Adult Heart    0.875 Adult VirginFemale Spermatheca    1.9 Adult InseminatedFemale Spermatheca    0.9 Adult Ovary    0.4 Adult Testis    0.7 Adult Male Accessory Gland    18.8 Adult Carcass    1.7 Expression Level Scale  None   Low  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    0.475 Larval Midgut    1.1 Larval Hindgut    1.8 Larval Malpighian Tubules    1.6 Larval Fat Body    4.7 Larval Salivary Gland    1 Larval Trachea    0.275 Larval Carcass    1.3 Adult Head    1.2 Adult Eye    1.875 Adult Brain    1 Adult Thoracic-Abdominal Ganglion    0.9 Adult Crop    2 Adult Midgut    1.3 Adult Hindgut    0.6 Adult Malpighian Tubules    1.6 Adult Fat Body    1.2 Adult Salivary Gland    2.1 Adult Heart    0.875 Adult VirginFemale Spermatheca    1.9 Adult InseminatedFemale Spermatheca    0.9 Adult Ovary    0.4 Adult Testis    0.7 Adult Male Accessory Gland    18.8 Adult Carcass    1.7 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    0.475 Larval Midgut    1.1 Larval Hindgut    1.8 Larval Malpighian Tubules    1.6 Larval Fat Body    4.7 Larval Salivary Gland    1 Larval Trachea    0.275 Larval Carcass    1.3 Adult Head    1.2 Adult Eye    1.875 Adult Brain    1 Adult Thoracic-Abdominal Ganglion    0.9 Adult Crop    2 Adult Midgut    1.3 Adult Hindgut    0.6 Adult Malpighian Tubules    1.6 Adult Fat Body    1.2 Adult Salivary Gland    2.1 Adult Heart    0.875 Adult VirginFemale Spermatheca    1.9 Adult InseminatedFemale Spermatheca    0.9 Adult Ovary    0.4 Adult Testis    0.7 Adult Male Accessory Gland    18.8 Adult Carcass    1.7 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    0.475 Larval Midgut    1.1 Larval Hindgut    1.8 Larval Malpighian Tubules    1.6 Larval Fat Body    4.7 Larval Salivary Gland    1 Larval Trachea    0.275 Larval Carcass    1.3 Adult Head    1.2 Adult Eye    1.875 Adult Brain    1 Adult Thoracic-Abdominal Ganglion    0.9 Adult Crop    2 Adult Midgut    1.3 Adult Hindgut    0.6 Adult Malpighian Tubules    1.6 Adult Fat Body    1.2 Adult Salivary Gland    2.1 Adult Heart    0.875 Adult VirginFemale Spermatheca    1.9 Adult InseminatedFemale Spermatheca    0.9 Adult Ovary    0.4 Adult Testis    0.7 Adult Male Accessory Gland    18.8 Adult Carcass    1.7 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    0.475 Larval Midgut    1.1 Larval Hindgut    1.8 Larval Malpighian Tubules    1.6 Larval Fat Body    4.7 Larval Salivary Gland    1 Larval Trachea    0.275 Larval Carcass    1.3 Adult Head    1.2 Adult Eye    1.875 Adult Brain    1 Adult Thoracic-Abdominal Ganglion    0.9 Adult Crop    2 Adult Midgut    1.3 Adult Hindgut    0.6 Adult Malpighian Tubules    1.6 Adult Fat Body    1.2 Adult Salivary Gland    2.1 Adult Heart    0.875 Adult VirginFemale Spermatheca    1.9 Adult InseminatedFemale Spermatheca    0.9 Adult Ovary    0.4 Adult Testis    0.7 Adult Male Accessory Gland    18.8 Adult Carcass    1.7 Expression Level Scale  None   Low  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    0.475 Larval Midgut    1.1 Larval Hindgut    1.8 Larval Malpighian Tubules    1.6 Larval Fat Body    4.7 Larval Salivary Gland    1 Larval Trachea    0.275 Larval Carcass    1.3 Adult Head    1.2 Adult Eye    1.875 Adult Brain    1 Adult Thoracic-Abdominal Ganglion    0.9 Adult Crop    2 Adult Midgut    1.3 Adult Hindgut    0.6 Adult Malpighian Tubules    1.6 Adult Fat Body    1.2 Adult Salivary Gland    2.1 Adult Heart    0.875 Adult VirginFemale Spermatheca    1.9 Adult InseminatedFemale Spermatheca    0.9 Adult Ovary    0.4 Adult Testis    0.7 Adult Male Accessory Gland    18.8 Adult Carcass    1.7 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    0.475 Larval Midgut    1.1 Larval Hindgut    1.8 Larval Malpighian Tubules    1.6 Larval Fat Body    4.7 Larval Salivary Gland    1 Larval Trachea    0.275 Larval Carcass    1.3 Adult Head    1.2 Adult Eye    1.875 Adult Brain    1 Adult Thoracic-Abdominal Ganglion    0.9 Adult Crop    2 Adult Midgut    1.3 Adult Hindgut    0.6 Adult Malpighian Tubules    1.6 Adult Fat Body    1.2 Adult Salivary Gland    2.1 Adult Heart    0.875 Adult VirginFemale Spermatheca    1.9 Adult InseminatedFemale Spermatheca    0.9 Adult Ovary    0.4 Adult Testis    0.7 Adult Male Accessory Gland    18.8 Adult Carcass    1.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    0.475 Larval Midgut    1.1 Larval Hindgut    1.8 Larval Malpighian Tubules    1.6 Larval Fat Body    4.7 Larval Salivary Gland    1 Larval Trachea    0.275 Larval Carcass    1.3 Adult Head    1.2 Adult Eye    1.875 Adult Brain    1 Adult Thoracic-Abdominal Ganglion    0.9 Adult Crop    2 Adult Midgut    1.3 Adult Hindgut    0.6 Adult Malpighian Tubules    1.6 Adult Fat Body    1.2 Adult Salivary Gland    2.1 Adult Heart    0.875 Adult VirginFemale Spermatheca    1.9 Adult InseminatedFemale Spermatheca    0.9 Adult Ovary    0.4 Adult Testis    0.7 Adult Male Accessory Gland    18.8 Adult Carcass    1.7 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    1.2   NA  Eye    1.875   NA  Brain    1   0.475  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    0.9   NA  Crop    2   1.1  Midgut    1.3   1.8  Hindgut    0.6   1.6  Malpighian Tubules    1.6   4.7  Fat Body    1.2   1  Salivary Gland    2.1   NA  Heart    0.875   0.275  Trachea    NA   NA  VirginFemale Spermatheca    1.9   NA  InseminatedFemale Spermatheca    0.9   NA  Ovary    0.4   NA  Testis    0.7   NA  Male Accessory Gland    no informative data   1.3  Carcass    1.7 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    0 digestive system, 4-day adult    0 digestive system, 20-day adult    0 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    0 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    0 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    1 accessory gland, mated 4-day male    0 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    0 digestive system, 4-day adult    0 digestive system, 20-day adult    0 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    0 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    0 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    1 accessory gland, mated 4-day male    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    0 digestive system, 4-day adult    0 digestive system, 20-day adult    0 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    0 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    0 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    1 accessory gland, mated 4-day male    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    0 digestive system, 4-day adult    0 digestive system, 20-day adult    0 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    0 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    0 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    1 accessory gland, mated 4-day male    0 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    0 digestive system, 4-day adult    0 digestive system, 20-day adult    0 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    0 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    0 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    1 accessory gland, mated 4-day male    0 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    0 digestive system, 4-day adult    0 digestive system, 20-day adult    0 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    0 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    0 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    1 accessory gland, mated 4-day male    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    0 digestive system, 4-day adult    0 digestive system, 20-day adult    0 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    0 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    0 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    1 accessory gland, mated 4-day male    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    0 central nervous system, larvae L3    0 central nervous system, pupae P8    0 head, virgin 1-day female    0 head, virgin 4-day female    0 head, virgin 20-day female    0 head, mated 1-day female    0 head, mated 4-day female    0 head, mated 20-day female    0 head, mated 1-day male    0 head, mated 4-day male    0 head, mated 20-day male    0 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    0 digestive system, 1-day adult    0 digestive system, 4-day adult    0 digestive system, 20-day adult    0 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    0 carcass, 1-day adult    0 carcass, 4-day adult    0 carcass, 20-day adult    0 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    1 accessory gland, mated 4-day male    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of low expression to a trough of no expression detected. Peak expression observed within 12-18 embryonic stages, during early larval stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    1 embryo 14-16hr    5 embryo 16-18hr    4 embryo 18-20hr    1 embryo 20-22hr    0 embryo 22-24hr    1 larva L1    0 larva L2    3 larva L3 12hr old    1 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    1 embryo 14-16hr    5 embryo 16-18hr    4 embryo 18-20hr    1 embryo 20-22hr    0 embryo 22-24hr    1 larva L1    0 larva L2    3 larva L3 12hr old    1 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    1 embryo 14-16hr    5 embryo 16-18hr    4 embryo 18-20hr    1 embryo 20-22hr    0 embryo 22-24hr    1 larva L1    0 larva L2    3 larva L3 12hr old    1 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    1 embryo 14-16hr    5 embryo 16-18hr    4 embryo 18-20hr    1 embryo 20-22hr    0 embryo 22-24hr    1 larva L1    0 larva L2    3 larva L3 12hr old    1 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    1 embryo 14-16hr    5 embryo 16-18hr    4 embryo 18-20hr    1 embryo 20-22hr    0 embryo 22-24hr    1 larva L1    0 larva L2    3 larva L3 12hr old    1 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    1 embryo 14-16hr    5 embryo 16-18hr    4 embryo 18-20hr    1 embryo 20-22hr    0 embryo 22-24hr    1 larva L1    0 larva L2    3 larva L3 12hr old    1 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    1 embryo 14-16hr    5 embryo 16-18hr    4 embryo 18-20hr    1 embryo 20-22hr    0 embryo 22-24hr    1 larva L1    0 larva L2    3 larva L3 12hr old    1 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    1 embryo 14-16hr    5 embryo 16-18hr    4 embryo 18-20hr    1 embryo 20-22hr    0 embryo 22-24hr    1 larva L1    0 larva L2    3 larva L3 12hr old    1 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    0 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Treatments RNA-Seq
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_12 mE1_20_mRNA_expression_cluster_08
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039838 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG3669-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Phenotype manifest in Allele
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of CG3669 Class Mutagen Stocks Known lesion CG3669MB05085 1 -- CG3669MI05768 1 -- CG3669NP2629 1 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG3669 Class Mutagen Stocks Known lesion CG3669KK106086 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG3669GD11040 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel6218 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD11040} NA P{KK106086} NA
Insertions
	Type of insertions Name Expression data insertion of enhancer trap binary system Mi{ET1}CG3669MB05085 No P{GawB}CG3669NP2629 No miscellaneous insertions Mi{MIC}CG3669MI05768 NA
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
carbonate dehydratase activity inferred from sequence or structural similarity with UniProtKB:Q92051 (FlyBase, 1992-) zinc ion binding inferred from electronic annotation with InterPro:IPR018338 (FlyBase Curators et al., 2004-)
Biological Process
CV term Evidence References
one-carbon metabolic process inferred from electronic annotation with InterPro:IPR018338 (FlyBase Curators et al., 2004-)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG3669 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0039838
Orthologs
OrthoDB Orthologs (157) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6R7VWW Dipteran inclusive ortholog search No orthologs identified Insect inclusive ortholog search EOG6HQCF1 Arthropod inclusive ortholog search EOG63R23R Metazoa inclusive ortholog search EOG6C5RCR
Orthologs in Drosophila Species (EOG6R7VWW)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG3669     Drosophila simulans   Dsim\GD21568 Y   Drosophila sechellia   Dsec\GM12931 Y   Drosophila yakuba   Dyak\GE10928 Y   Drosophila ananassae   Dana\GF17777 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA27011 Y   Drosophila persimilis   Dper\GL13738 Y   Drosophila willistoni   Dwil\GK10871 Y   Drosophila virilis   Dvir\GJ23584 Y   Drosophila mojavensis   Dmoj\GI23611 Y   Drosophila grimshawi   Dgri\GH18011 Y
Orthologs in non-Drosophila Dipterans (None identified)
No non-Drosophilid orthologies identified
Orthologs in non-Dipteran Insects (EOG6HQCF1)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB47951 Y Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH27072 Y Atta cephalotes Leafcutter ant  Acep\ACEP15498 Y Camponotus floridanus Florida carpenter ant  Cflo\CFLO16387 Y Camponotus floridanus Florida carpenter ant  Cflo\CFLO16386 Y Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL16289 Y Linepithema humile Argentine ant  Lhum\LH24937 Y Pogonomyrmex barbatus Red harvester ant  Pbar\PB21456 Y Solenopsis invicta Red fire ant  Sinv\SINV14698 Y Tribolium castaneum Red flour beetle  Tcas\TC008569 Y
Orthologs in non-Insect Arthropods (EOG63R23R)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\rep Y Daphnia pulex Water flea  Dpux\rps16 Y Daphnia pulex Water flea  Dpux\rps16 Y Daphnia pulex Water flea  Dpux\CAA6H Y Daphnia pulex Water flea  Dpux\JGI_V11_442487 Y Daphnia pulex Water flea  Dpux\CAA7Q Y Daphnia pulex Water flea  Dpux\rps16 Y Daphnia pulex Water flea  Dpux\rps16 Y Daphnia pulex Water flea  Dpux\CAA6A Y Daphnia pulex Water flea  Dpux\CAA2 Y Daphnia pulex Water flea  Dpux\HC352 Y Daphnia pulex Water flea  Dpux\JGI_V11_442471 Y Daphnia pulex Water flea  Dpux\JGI_V11_442486 Y Daphnia pulex Water flea  Dpux\JGI_V11_442468 Y Daphnia pulex Water flea  Dpux\Msx Y Daphnia pulex Water flea  Dpux\pTP Y Daphnia pulex Water flea  Dpux\CAA6D Y Daphnia pulex Water flea  Dpux\CAA1 Y Daphnia pulex Water flea  Dpux\JGI_V11_442476 Y Daphnia pulex Water flea  Dpux\JGI_V11_442491 Y Daphnia pulex Water flea  Dpux\JGI_V11_442490 Y Daphnia pulex Water flea  Dpux\JGI_V11_442472 Y Daphnia pulex Water flea  Dpux\CAA7F Y Daphnia pulex Water flea  Dpux\JGI_V11_442489 Y Daphnia pulex Water flea  Dpux\JGI_V11_442493 Y Daphnia pulex Water flea  Dpux\JGI_V11_442488 Y Daphnia pulex Water flea  Dpux\JGI_V11_442477 Y Daphnia pulex Water flea  Dpux\JGI_V11_442475 Y Ixodes scapularis Deer tick  Isca\ISCW013450 Y Ixodes scapularis Deer tick  Isca\ISCW015100 Y Ixodes scapularis Deer tick  Isca\ISCW008314 Y Ixodes scapularis Deer tick  Isca\ISCW011980 Y
Orthologs in non-Arthropod Metazoa (EOG6C5RCR)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\cah-4 Y Caenorhabditis elegans Nematode  Cele\cah-5 Y Caenorhabditis elegans Nematode  Cele\cah-3 Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_012995gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_017421gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_025722gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_013458gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_008658gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_001138gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_008894gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_026747gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_009509gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_013459gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_024809gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_000702gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_022346gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_026483gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_016740gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_012518gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_010471gn Y Danio rerio Zebrafish  Drer\ca4a Y Danio rerio Zebrafish  Drer\ENSDARG00000060829 Y Danio rerio Zebrafish  Drer\ca15c Y Danio rerio Zebrafish  Drer\ca15b Y Danio rerio Zebrafish  Drer\ca2 Y Danio rerio Zebrafish  Drer\ENSDARG00000045644 Y Danio rerio Zebrafish  Drer\ca7 Y Danio rerio Zebrafish  Drer\zgc:153760 Y Danio rerio Zebrafish  Drer\ca14 Y Danio rerio Zebrafish  Drer\ca8 Y Danio rerio Zebrafish  Drer\cahz Y Danio rerio Zebrafish  Drer\ca4b Y Danio rerio Zebrafish  Drer\ca5 Y Danio rerio Zebrafish  Drer\ENSDARG00000076237 Y Danio rerio Zebrafish  Drer\ca6 Y Danio rerio Zebrafish  Drer\ca15a Y Danio rerio Zebrafish  Drer\si:dkey-225f3.3 Y Danio rerio Zebrafish  Drer\ca9 Y Xenopus tropicalis Western clawed frog  Xtro\ca6 Y Xenopus tropicalis Western clawed frog  Xtro\ENSXETG00000018800 Y Xenopus tropicalis Western clawed frog  Xtro\ENSXETG00000032948 Y Xenopus tropicalis Western clawed frog  Xtro\ENSXETG00000013489 Y Xenopus tropicalis Western clawed frog  Xtro\ca3 Y Xenopus tropicalis Western clawed frog  Xtro\ca14 Y Xenopus tropicalis Western clawed frog  Xtro\ca7 Y Xenopus tropicalis Western clawed frog  Xtro\ca8 Y Xenopus tropicalis Western clawed frog  Xtro\ca5b Y Xenopus tropicalis Western clawed frog  Xtro\car1_predicted Y Xenopus tropicalis Western clawed frog  Xtro\ca12 Y Xenopus tropicalis Western clawed frog  Xtro\ENSXETG00000022384 Y Xenopus tropicalis Western clawed frog  Xtro\ca1 Y Xenopus tropicalis Western clawed frog  Xtro\ca2 Y Xenopus tropicalis Western clawed frog  Xtro\ENSXETG00000005523 Y Gallus gallus Domestic chicken  Ggal\CA2 Y Gallus gallus Domestic chicken  Ggal\CA8 Y Gallus gallus Domestic chicken  Ggal\CA6 Y Gallus gallus Domestic chicken  Ggal\CA5B Y Gallus gallus Domestic chicken  Ggal\CA9 Y Gallus gallus Domestic chicken  Ggal\CA3 Y Gallus gallus Domestic chicken  Ggal\CA7 Y Gallus gallus Domestic chicken  Ggal\LOC416927 Y Gallus gallus Domestic chicken  Ggal\CA13 Y Gallus gallus Domestic chicken  Ggal\CA3 Y Gallus gallus Domestic chicken  Ggal\CA1 Y Gallus gallus Domestic chicken  Ggal\CA4 Y Gallus gallus Domestic chicken  Ggal\CA12 Y Mus musculus House mouse  Mmus\Ca3 Y Mus musculus House mouse  Mmus\Ca5a Y Mus musculus House mouse  Mmus\Car1 Y Mus musculus House mouse  Mmus\ENSMUSG00000032373 Y Mus musculus House mouse  Mmus\Ca6 Y Mus musculus House mouse  Mmus\Car8 Y Mus musculus House mouse  Mmus\Ca14 Y Mus musculus House mouse  Mmus\Car5b Y Mus musculus House mouse  Mmus\Ca15 Y Mus musculus House mouse  Mmus\Ca2 Y Mus musculus House mouse  Mmus\Car7 Y Mus musculus House mouse  Mmus\Ca13 Y Mus musculus House mouse  Mmus\Car9 Y Rattus norvegicus Norway rat  Rnor\Car12 Y Rattus norvegicus Norway rat  Rnor\Car7 Y Rattus norvegicus Norway rat  Rnor\Ca1 Y Rattus norvegicus Norway rat  Rnor\Ca2 Y Rattus norvegicus Norway rat  Rnor\Car15 Y Rattus norvegicus Norway rat  Rnor\Ca3 Y Rattus norvegicus Norway rat  Rnor\Car14 Y Rattus norvegicus Norway rat  Rnor\Ca8 Y Rattus norvegicus Norway rat  Rnor\Ca4 Y Rattus norvegicus Norway rat  Rnor\Car6 Y Rattus norvegicus Norway rat  Rnor\Ca5a Y Rattus norvegicus Norway rat  Rnor\Ca5b Y Rattus norvegicus Norway rat  Rnor\Car13 Y Rattus norvegicus Norway rat  Rnor\Car9 Y Homo sapiens Human  Hsap\CA6 Y Homo sapiens Human  Hsap\CA7 Y Homo sapiens Human  Hsap\CA13 Y Homo sapiens Human  Hsap\CA2 Y Homo sapiens Human  Hsap\CA9 Y Homo sapiens Human  Hsap\CA4 Y Homo sapiens Human  Hsap\CA14 Y Homo sapiens Human  Hsap\CA1 Y Homo sapiens Human  Hsap\CA8 Y Homo sapiens Human  Hsap\CA5A Y Homo sapiens Human  Hsap\CA12 Y
Human Orthologs (11)
Gene OMIM HGNC Hsap\CA6     Hsap\CA7     Hsap\CA13     Hsap\CA2     Hsap\CA9     Hsap\CA4     Hsap\CA14     Hsap\CA1     Hsap\CA8     Hsap\CA5A     Hsap\CA12
AAA Orthologs (10) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD21568 Drosophila sechellia Dsec\GM12931 Drosophila yakuba Dyak\GE10928 Drosophila ananassae Dana\GF17777 Drosophila pseudoobscura pseudoobscura Dpse\GA27011 Drosophila persimilis Dper\GL13738 Drosophila willistoni Dwil\GK10871 Drosophila virilis Dvir\GJ23584 Drosophila mojavensis Dmoj\GI23611 Drosophila grimshawi Dgri\GH18011
Stocks & Reagents
Stocks Listed in FlyBase ( 4 )
Bloomington	24742 w1118; Mi{ET1}CG3669MB05085 42111 y1 w*; Mi{MIC}CG3669MI05768
Kyoto	104265 w*; P{GawB}CG3669NP2629 / TM3, Sb1 Ser1
VDRC	v106607 P{KK106086}VIE-260B
Genomic Clones ( 1 )
	BACR30B13 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 3 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones	45930 EK162337 EK185607
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0039838 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 43701
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_001104517 RefSeq (Proteins) • NP_001097987 DDBJ / EMBL / GenBank • AAF57140 Entrez Gene - A searchable database of RefSeq genes. • 43701 UniProtKB/TrEMBL • Q9V9Y8
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Alpha carbonic anhydrase (IPR001148) Carbonic anhydrase, alpha-class, conserved site (IPR018338) Carbonic anhydrase, alpha-class (IPR023561)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0039838 DRSC - Results from RNAi screens. • FBgn0039838 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039838 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG3669-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0039838 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 43701 modMine - Data generated by the modENCODE project. • FBgn0039838
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG3669 (Keleman et al., 2009.8.5)
Name Synonym
Secondary FlyBase IDs
References ( 12 )
Supplementary material	Graveley et al., 2011, Nature 471(7339): Supplementary Table 33. Fuzzy Cluster Members. [FBrf0213980] The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Dietzl et al., 2007, Nature 448(7150): Supplementary Table 1. [FBrf0202579]
Personal communication to FlyBase	Bellen, 2012.10.23, set1006_v2.xml set1006_v2.xml [FBrf0219849] Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Bellen, 2007.10.30, batch763.xml batch763.xml [FBrf0200261] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase Curators, 2008, Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. [FBrf0202955] FlyBase, 1992-, FlyBase curation. FlyBase curation. [FBrf0105495]
Curated genome annotation	Ashburner, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126651] FamiliarityBreedsContempt, 1999.11, [Automatic annotations performed at the Celera Jamboreee.] [Automatic annotations performed at the Celera Jamboreee.] [FBrf0126705]