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Gene Dmel\CG11539

General Information
Symbol	Dmel\CG11539	Species	D. melanogaster
Name		Annotation symbol	CG11539
Feature type	protein_coding_gene	FlyBase ID	FBgn0039859
Gene Model Status	Current	Stock availability	5 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	100D1-100D1	Sequence location	3R:27,441,006..27,441,742 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG11539 (FBgn0039859). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: N-acetyltransferase activity. The biological processes in which it is involved are not known. 3 alleles are reported. The phenotypes of these alleles are annotated with: trichogen cell; mesothoracic tergum. It has one annotated transcript and one annotated polypeptide. Protein features are: Acyl-CoA N-acyltransferase; GCN5-related N-acetyltransferase (GNAT) domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. Comments on Affy2 ProbeSet: ProbeSet 1639809_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG11539. Gene sequence location is 3R:27441006..27441742.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features BKN29382 HFA14325
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 100D1-100D1   Limits computationally determined from genome sequence between P{EP}pygoEP1076 and P{PZ}ttk02667&P{lacW}ttkj6C7
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG11539 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG11539-RA FBtr0085868  NM_143620   737   200
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG11539-PA   FBpp0085227   23.6   200   4.59     NP_651877   AAF57173
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • GCN5-related N-acetyltransferase (GNAT) domain (IPR000182) Acyl-CoA N-acyltransferase (IPR016181)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014297 AAF57173   BT029052   EL876571
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9V9V9
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0039859    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0039859 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0039859 expression level Developmental Stage   Expression Level embryo 00-02hr    777 embryo 02-04hr    231 embryo 04-06hr    664 embryo 06-08hr    773 embryo 08-10hr    813 embryo 10-12hr    780 embryo 12-14hr    636 embryo 14-16hr    570 embryo 16-18hr    557 embryo 18-20hr    383 embryo 20-22hr    370 embryo 22-24hr    519 larva L1    495 larva L2    506 larva L3 12hr old    371 larva L3 puffstage 1-2    427 larva L3 puffstage 3-6    505 larva L3 puffstage 7-9    625 white prepupae new    564 white prepupae 12hr    760 white prepupae 24hr    879 pupae 2d postWPP    669 pupae 3d postWPP    642 pupae 4d postWPP    594 adult male 01day    678 adult male 05day    694 adult male 30day    792 adult female 01day    615 adult female 05day    721 adult female 30day    786 Expression Level Scale  None   Extremely low   Very low   Low   Moderate  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (777) embryo 02-04hr  (231) embryo 04-06hr  (664) embryo 06-08hr  (773) embryo 08-10hr  (813) embryo 10-12hr  (780) embryo 12-14hr  (636) embryo 14-16hr  (570) embryo 16-18hr  (557) embryo 18-20hr  (383) embryo 20-22hr  (370) embryo 22-24hr  (519) larva L1  (495) larva L2  (506) larva L3 12hr old  (371) larva L3 puffstage 1-2  (427) larva L3 puffstage 3-6  (505) larva L3 puffstage 7-9  (625) white prepupae new  (564) white prepupae 12hr  (760) white prepupae 24hr  (879) pupae 2d postWPP  (669) pupae 3d postWPP  (642) pupae 4d postWPP  (594) adult male 01day  (678) adult male 05day  (694) adult male 30day  (792) adult female 01day  (615) adult female 05day  (721) adult female 30day  (786) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    777 embryo 02-04hr    231 embryo 04-06hr    664 embryo 06-08hr    773 embryo 08-10hr    813 embryo 10-12hr    780 embryo 12-14hr    636 embryo 14-16hr    570 embryo 16-18hr    557 embryo 18-20hr    383 embryo 20-22hr    370 embryo 22-24hr    519 larva L1    495 larva L2    506 larva L3 12hr old    371 larva L3 puffstage 1-2    427 larva L3 puffstage 3-6    505 larva L3 puffstage 7-9    625 white prepupae new    564 white prepupae 12hr    760 white prepupae 24hr    879 pupae 2d postWPP    669 pupae 3d postWPP    642 pupae 4d postWPP    594 adult male 01day    678 adult male 05day    694 adult male 30day    792 adult female 01day    615 adult female 05day    721 adult female 30day    786 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    777 embryo 02-04hr    231 embryo 04-06hr    664 embryo 06-08hr    773 embryo 08-10hr    813 embryo 10-12hr    780 embryo 12-14hr    636 embryo 14-16hr    570 embryo 16-18hr    557 embryo 18-20hr    383 embryo 20-22hr    370 embryo 22-24hr    519 larva L1    495 larva L2    506 larva L3 12hr old    371 larva L3 puffstage 1-2    427 larva L3 puffstage 3-6    505 larva L3 puffstage 7-9    625 white prepupae new    564 white prepupae 12hr    760 white prepupae 24hr    879 pupae 2d postWPP    669 pupae 3d postWPP    642 pupae 4d postWPP    594 adult male 01day    678 adult male 05day    694 adult male 30day    792 adult female 01day    615 adult female 05day    721 adult female 30day    786 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    777 embryo 02-04hr    231 embryo 04-06hr    664 embryo 06-08hr    773 embryo 08-10hr    813 embryo 10-12hr    780 embryo 12-14hr    636 embryo 14-16hr    570 embryo 16-18hr    557 embryo 18-20hr    383 embryo 20-22hr    370 embryo 22-24hr    519 larva L1    495 larva L2    506 larva L3 12hr old    371 larva L3 puffstage 1-2    427 larva L3 puffstage 3-6    505 larva L3 puffstage 7-9    625 white prepupae new    564 white prepupae 12hr    760 white prepupae 24hr    879 pupae 2d postWPP    669 pupae 3d postWPP    642 pupae 4d postWPP    594 adult male 01day    678 adult male 05day    694 adult male 30day    792 adult female 01day    615 adult female 05day    721 adult female 30day    786 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0039859 expression level Developmental Stage   Expression Level embryo 00-02hr    777 embryo 02-04hr    231 embryo 04-06hr    664 embryo 06-08hr    773 embryo 08-10hr    813 embryo 10-12hr    780 embryo 12-14hr    636 embryo 14-16hr    570 embryo 16-18hr    557 embryo 18-20hr    383 embryo 20-22hr    370 embryo 22-24hr    519 larva L1    495 larva L2    506 larva L3 12hr old    371 larva L3 puffstage 1-2    427 larva L3 puffstage 3-6    505 larva L3 puffstage 7-9    625 white prepupae new    564 white prepupae 12hr    760 white prepupae 24hr    879 pupae 2d postWPP    669 pupae 3d postWPP    642 pupae 4d postWPP    594 adult male 01day    678 adult male 05day    694 adult male 30day    792 adult female 01day    615 adult female 05day    721 adult female 30day    786 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (777) embryo 02-04hr  (231) embryo 04-06hr  (664) embryo 06-08hr  (773) embryo 08-10hr  (813) embryo 10-12hr  (780) embryo 12-14hr  (636) embryo 14-16hr  (570) embryo 16-18hr  (557) embryo 18-20hr  (383) embryo 20-22hr  (370) embryo 22-24hr  (519) larva L1  (495) larva L2  (506) larva L3 12hr old  (371) larva L3 puffstage 1-2  (427) larva L3 puffstage 3-6  (505) larva L3 puffstage 7-9  (625) white prepupae new  (564) white prepupae 12hr  (760) white prepupae 24hr  (879) pupae 2d postWPP  (669) pupae 3d postWPP  (642) pupae 4d postWPP  (594) adult male 01day  (678) adult male 05day  (694) adult male 30day  (792) adult female 01day  (615) adult female 05day  (721) adult female 30day  (786) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    777 embryo 02-04hr    231 embryo 04-06hr    664 embryo 06-08hr    773 embryo 08-10hr    813 embryo 10-12hr    780 embryo 12-14hr    636 embryo 14-16hr    570 embryo 16-18hr    557 embryo 18-20hr    383 embryo 20-22hr    370 embryo 22-24hr    519 larva L1    495 larva L2    506 larva L3 12hr old    371 larva L3 puffstage 1-2    427 larva L3 puffstage 3-6    505 larva L3 puffstage 7-9    625 white prepupae new    564 white prepupae 12hr    760 white prepupae 24hr    879 pupae 2d postWPP    669 pupae 3d postWPP    642 pupae 4d postWPP    594 adult male 01day    678 adult male 05day    694 adult male 30day    792 adult female 01day    615 adult female 05day    721 adult female 30day    786 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    777 embryo 02-04hr    231 embryo 04-06hr    664 embryo 06-08hr    773 embryo 08-10hr    813 embryo 10-12hr    780 embryo 12-14hr    636 embryo 14-16hr    570 embryo 16-18hr    557 embryo 18-20hr    383 embryo 20-22hr    370 embryo 22-24hr    519 larva L1    495 larva L2    506 larva L3 12hr old    371 larva L3 puffstage 1-2    427 larva L3 puffstage 3-6    505 larva L3 puffstage 7-9    625 white prepupae new    564 white prepupae 12hr    760 white prepupae 24hr    879 pupae 2d postWPP    669 pupae 3d postWPP    642 pupae 4d postWPP    594 adult male 01day    678 adult male 05day    694 adult male 30day    792 adult female 01day    615 adult female 05day    721 adult female 30day    786 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    777 embryo 02-04hr    231 embryo 04-06hr    664 embryo 06-08hr    773 embryo 08-10hr    813 embryo 10-12hr    780 embryo 12-14hr    636 embryo 14-16hr    570 embryo 16-18hr    557 embryo 18-20hr    383 embryo 20-22hr    370 embryo 22-24hr    519 larva L1    495 larva L2    506 larva L3 12hr old    371 larva L3 puffstage 1-2    427 larva L3 puffstage 3-6    505 larva L3 puffstage 7-9    625 white prepupae new    564 white prepupae 12hr    760 white prepupae 24hr    879 pupae 2d postWPP    669 pupae 3d postWPP    642 pupae 4d postWPP    594 adult male 01day    678 adult male 05day    694 adult male 30day    792 adult female 01day    615 adult female 05day    721 adult female 30day    786 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0039859    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0039859 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0039859 expression level Tissue   Expression Level Larval Central Nervous System    18.7 Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules    35.8 Larval Fat Body no informative data Larval Salivary Gland    37.7 Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain    22.5 Adult Thoracic-Abdominal Ganglion    21.3 Adult Crop no informative data Adult Midgut    33.5 Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland    66.1 Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    31.8 Adult Testis    57.4 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    18.7 Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules    35.8 Larval Fat Body no informative data Larval Salivary Gland    37.7 Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain    22.5 Adult Thoracic-Abdominal Ganglion    21.3 Adult Crop no informative data Adult Midgut    33.5 Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland    66.1 Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    31.8 Adult Testis    57.4 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    18.7 Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules    35.8 Larval Fat Body no informative data Larval Salivary Gland    37.7 Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain    22.5 Adult Thoracic-Abdominal Ganglion    21.3 Adult Crop no informative data Adult Midgut    33.5 Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland    66.1 Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    31.8 Adult Testis    57.4 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    18.7 Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules    35.8 Larval Fat Body no informative data Larval Salivary Gland    37.7 Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain    22.5 Adult Thoracic-Abdominal Ganglion    21.3 Adult Crop no informative data Adult Midgut    33.5 Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland    66.1 Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    31.8 Adult Testis    57.4 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0039859 expression level Tissue   Expression Level Larval Central Nervous System    18.7 Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules    35.8 Larval Fat Body no informative data Larval Salivary Gland    37.7 Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain    22.5 Adult Thoracic-Abdominal Ganglion    21.3 Adult Crop no informative data Adult Midgut    33.5 Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland    66.1 Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    31.8 Adult Testis    57.4 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    18.7 Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules    35.8 Larval Fat Body no informative data Larval Salivary Gland    37.7 Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain    22.5 Adult Thoracic-Abdominal Ganglion    21.3 Adult Crop no informative data Adult Midgut    33.5 Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland    66.1 Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    31.8 Adult Testis    57.4 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    18.7 Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules    35.8 Larval Fat Body no informative data Larval Salivary Gland    37.7 Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain    22.5 Adult Thoracic-Abdominal Ganglion    21.3 Adult Crop no informative data Adult Midgut    33.5 Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland    66.1 Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    31.8 Adult Testis    57.4 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    18.7 Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules    35.8 Larval Fat Body no informative data Larval Salivary Gland    37.7 Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain    22.5 Adult Thoracic-Abdominal Ganglion    21.3 Adult Crop no informative data Adult Midgut    33.5 Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland    66.1 Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    31.8 Adult Testis    57.4 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules     Larval Fat Body no informative data Larval Salivary Gland     Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop no informative data Adult Midgut     Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland     Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary     Adult Testis     Adult Male Accessory Gland no informative data Adult Carcass no informative data FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    no informative data   NA  Eye    no informative data   NA  Brain    22.5   18.7  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    21.3   NA  Crop    no informative data   no informative data  Midgut    33.5   no informative data  Hindgut    no informative data   35.8  Malpighian Tubules    no informative data   no informative data  Fat Body    no informative data   37.7  Salivary Gland    66.1   NA  Heart    no informative data   no informative data  Trachea    NA   NA  VirginFemale Spermatheca    no informative data   NA  InseminatedFemale Spermatheca    no informative data   NA  Ovary    31.8   NA  Testis    57.4   NA  Male Accessory Gland    no informative data   no informative data  Carcass    no informative data modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039859 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11539-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG11539GD7326 Other Phenotypes Allele visible, with Scer\GAL4pnr-MD237 CG11539GD7326 Phenotype manifest in Allele mesothoracic tergum, with Scer\GAL4pnr-MD237 CG11539GD7326 trichogen cell, with Scer\GAL4pnr-MD237 CG11539GD7326
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CG11539 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG11539 Class Mutagen Stocks Known lesion CG11539GD17314 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG11539GD7326 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG11539KK109382 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD7326} NA P{GD17314} NA P{KK109382} NA
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 1 unique term )
	There is no information supporting a cellular component term for this gene. (Based on a review of available data before: 2006)
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function
CV term Evidence References
N-acetyltransferase activity inferred from electronic annotation with InterPro:IPR000182 (FlyBase Curators et al., 2004-)
Biological Process ( 0 terms)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG11539 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 68569 DroID - A comprehensive database of gene and protein interactions. • FBgn0039859 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 43726
Orthologs
Genome-wide drosophilid orthologs	Dana\GF23258 Dere\GG11861 Dgri\GH18940 Dmoj\GI24198 Dper\GL23884 Dpse\GA11058 Dsec\GM16425 Dsim\GD16381 Dvir\GJ24125 Dwil\GK11374 Dyak\GE23310
Curated drosophilid orthologs	Dpse\GA11058
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL007994-PA Aedes aegypti (mosquito) XP_624206.1 Apis mellifera (honey bee) At2g04845.1 Arabidopsis thaliana (wall cress) 11065 Batrachochytrium dendrobatidis (chytrid fungus) 226921 Branchiostoma floridae (lancelet) XP_001894166.1 Brugia malayi (roundworm nematode) ENSBTAP00000015123 Bos taurus (bovine) CN25654 Caenorhabditis brenneri (small nematode) CBP17256 Caenorhabditis briggsae (nematode) CE39061 Caenorhabditis elegans (worm) ENSCAFP00000006871 Canis familiaris (dog) ENSCINP00000023139 Ciona intestinalis (sea squirt) JA16990 Caenorhabditis japonica (nematode) cn09317 Cryptococcus neoformans (yeast-like fungus) CPIJ019114 Culex pipens (mosquito) ENSCPOP00000001153 Cavia porcellus (guinea pig) 115555 Chlamidomonas reinhardtii (green alga) RP26630 Caenorhabditis remanei (nematode) 212602 Capitella spl (polychaete worm) DDB0302480 Dictyostelium discoideum (amoeba) 306678 Daphnia pulex (daphnia) ENSDARP00000088152 Danio rerio (zebra fish) ENSDARP00000096360 Danio rerio (zebra fish) ENSECAP00000010806 Equus caballus (horse) ENSGACP00000004135 Gymnopilus aculeatus (mushroom) ENSGALP00000012509 Gallus gallus (chicken) 157613 Hypsipyla robusta (cedar shoot borer) ENSP00000350467 Homo sapiens (human) 195719 Lottia gigantea (owl limpet) LmjF22.0600 Leishmania major (virus) 10765 Monocosta brevicollis (choanoflagellate) ENSMODP00000008510 Monodelphis domestica (gray opossum) ENSMMUP00000007575 Macaca mulatta (rhesus monkey) ENSMUSP00000099329 Mus musculus (house mouse) 171834 Nematostella vectensis (starlet anemone) XP_001605881.1 Nasonia vitripennis (wasp) ENSOANP00000019894 Ornithorynchus anatinus (platypus) ENSORLP00000023430 Oryzias latipes (japanese killifish) LOC_Os03g09860.1 Oryza sativa (asian rice) 16925 Ostreococcus tauri (green alga) PHUM002879-PA Pediculus humanus (human body louse) ENSPPYP00000009664 Pongo pygmaeus (orangutan) 76823 Phytophthora ramorum (sudden oak death pathogen) 136358 Phytophthora sojae (root rot pathogen) 824339 Populus trichocarpa (black cottonwood) ENSPTRP00000045004 Pan troglodytes (chimpanzee) ENSRNOP00000004372 Rattus norvegicus (norway rat) 5050014 Sorghum bicolor (sorghum) Smp_017450 Schistosoma mansoni (trematode parasite) SPBC577.03c Schizosaccharomyces pombe (fission yeast) XP_001194555.1 Strongylocentrotus purpuratus (purple sea urchin) 20514 Trichoplax adhaerens (metazoa) XP_971056.1 Tribolium castaneum (red flour beetle) ENSTNIP00000009526 Tetraodon nigroviridis (green spotted pufferfish) 38370 Thalassiosira pseudonana (marine diatom) 3716.m00018 Tetrahymena thermophila (ciliate protozoa) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB13359 NV11476 LH20647 ISCW021123 FBgn0240506 FBgn0213385 FBgn0211209 FBgn0188000 FBgn0171340 JGI_V11_306678 FBgn0071113 FBgn0161474 FBgn0146921 FBgn0126407 FBgn0104156 FBgn0100252 CPIJ019114 GB15488 AGAP007378 AAEL007994 PHUM233560 GLEAN_00126
Stocks & Reagents
Stocks Listed in FlyBase ( 5 )
VDRC	v104497 P{KK109382}VIE-260B v49580 w1118; P{GD17314}v49580 v31518 w1118; P{GD7326}v31518/TM3 v31519 w1118; P{GD7326}v31519/CyO v49582 w1118; P{GD17314}v49582/TM3
Genomic Clones ( 1 )
	BACR16C04 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 2 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	IP06409
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones	IP06509
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0039859 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 43726
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_143620 RefSeq (Proteins) • NP_651877 DDBJ / EMBL / GenBank • AAF57173 Entrez Gene - A searchable database of RefSeq genes. • 43726 UniProtKB/TrEMBL • Q9V9V9
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • GCN5-related N-acetyltransferase (GNAT) domain (IPR000182) Acyl-CoA N-acyltransferase (IPR016181)
Linkouts
	BioGRID - A database of protein and genetic interactions • 68569 DroID - A comprehensive database of gene and protein interactions. • FBgn0039859 DRSC - Results from RNAi screens. • FBgn0039859 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039859 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11539-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0039859 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 43726 InParanoid A subset of ortholog calls from InParanoid. • AAEL007994-PA Aedes aegypti (mosquito) XP_624206.1 Apis mellifera (honey bee) At2g04845.1 Arabidopsis thaliana (wall cress) 11065 Batrachochytrium dendrobatidis (chytrid fungus) 226921 Branchiostoma floridae (lancelet) XP_001894166.1 Brugia malayi (roundworm nematode) ENSBTAP00000015123 Bos taurus (bovine) CN25654 Caenorhabditis brenneri (small nematode) CBP17256 Caenorhabditis briggsae (nematode) CE39061 Caenorhabditis elegans (worm) ENSCAFP00000006871 Canis familiaris (dog) ENSCINP00000023139 Ciona intestinalis (sea squirt) JA16990 Caenorhabditis japonica (nematode) cn09317 Cryptococcus neoformans (yeast-like fungus) CPIJ019114 Culex pipens (mosquito) ENSCPOP00000001153 Cavia porcellus (guinea pig) 115555 Chlamidomonas reinhardtii (green alga) RP26630 Caenorhabditis remanei (nematode) 212602 Capitella spl (polychaete worm) DDB0302480 Dictyostelium discoideum (amoeba) 306678 Daphnia pulex (daphnia) ENSDARP00000088152 Danio rerio (zebra fish) ENSDARP00000096360 Danio rerio (zebra fish) ENSECAP00000010806 Equus caballus (horse) ENSGACP00000004135 Gymnopilus aculeatus (mushroom) ENSGALP00000012509 Gallus gallus (chicken) 157613 Hypsipyla robusta (cedar shoot borer) ENSP00000350467 Homo sapiens (human) 195719 Lottia gigantea (owl limpet) LmjF22.0600 Leishmania major (virus) 10765 Monocosta brevicollis (choanoflagellate) ENSMODP00000008510 Monodelphis domestica (gray opossum) ENSMMUP00000007575 Macaca mulatta (rhesus monkey) ENSMUSP00000099329 Mus musculus (house mouse) 171834 Nematostella vectensis (starlet anemone) XP_001605881.1 Nasonia vitripennis (wasp) ENSOANP00000019894 Ornithorynchus anatinus (platypus) ENSORLP00000023430 Oryzias latipes (japanese killifish) LOC_Os03g09860.1 Oryza sativa (asian rice) 16925 Ostreococcus tauri (green alga) PHUM002879-PA Pediculus humanus (human body louse) ENSPPYP00000009664 Pongo pygmaeus (orangutan) 76823 Phytophthora ramorum (sudden oak death pathogen) 136358 Phytophthora sojae (root rot pathogen) 824339 Populus trichocarpa (black cottonwood) ENSPTRP00000045004 Pan troglodytes (chimpanzee) ENSRNOP00000004372 Rattus norvegicus (norway rat) 5050014 Sorghum bicolor (sorghum) Smp_017450 Schistosoma mansoni (trematode parasite) SPBC577.03c Schizosaccharomyces pombe (fission yeast) XP_001194555.1 Strongylocentrotus purpuratus (purple sea urchin) 20514 Trichoplax adhaerens (metazoa) XP_971056.1 Tribolium castaneum (red flour beetle) ENSTNIP00000009526 Tetraodon nigroviridis (green spotted pufferfish) 38370 Thalassiosira pseudonana (marine diatom) 3716.m00018 Tetrahymena thermophila (ciliate protozoa) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 43726 modMine - Data generated by the modENCODE project. • FBgn0039859 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB13359 NV11476 LH20647 ISCW021123 FBgn0240506 FBgn0213385 FBgn0211209 FBgn0188000 FBgn0171340 JGI_V11_306678 FBgn0071113 FBgn0161474 FBgn0146921 FBgn0126407 FBgn0104156 FBgn0100252 CPIJ019114 GB15488 AGAP007378 AAEL007994 PHUM233560 GLEAN_00126
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG11539 (Keleman et al., 2009.8.5)
Name Synonym
Secondary FlyBase IDs
References ( 7 )
Supplementary material	Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
FlyBase analysis	FlyBase Curators, 2002-, Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. [FBrf0159398]