• Home
• Tools
  • Tools Overview
  • Query Tools

    
    • QuickSearch
    • QueryBuilder
    • TermLink
    • CytoSearch
    • Interactions Browser
    • ImageBrowse
    • Find A Person
    • Google™ FlyBase
  • Genomic/Map Tools

    
    • BLAST
    • GBrowse
    • CytoSearch
    • Aberrations Maps
    • Chromosome Maps
    • Coordinates Converter
  • Retrieve/Convert

    
    • Batch Download
    • Coordinates Converter
    • ID Converter
  • Data Submission

    
    • Fast-Track Your Paper
    • Submit Personal Comm
    • Add A New Person
    • Update Person Info
  • People

    
    • Find A Person
    • Add A New Person
    • Update Person Info
• Files
  • Files Overview
  • Downloads:
  • Precomputed files
  • Archived data
  • Releases (FTP)
  • Genomes (FTP)
  • AAA data (FTP)
  • Lists:
  • Transposons (Dmel)
  • Transposons (other)
  • Vectors & Constructs
  • Anatomical Terms
  • Map Conversion
• Species
  • Phylogeny
  • Sequenced Species
  • Synteny Table
  • Color Illustrations
  • Abbreviations
• Documents
  • About FlyBase
  • Reference Manual:
  • Sections
  • Contents
  • Nomenclature
  • Release Notes
• Resources
  • All Resources
  • Model Organisms
  • Stock Collections
  • Other links:
  • BDGP
  • DGRC
  • FlyExpress
  • Interactive Fly
  • modENCODE
  • Textpresso for Fly
• News
  • News
  • FlyBase Forum
  • FlyBase Positions
  • Meetings
  • Courses
  • Fly Board
  • White papers
  • Funding
  • bionet.dros
• Help
  • Google™ FlyBase
  • Site Map
  • FAQs
  • FlyBase Guides
  • Video Tutorials
  • Report help
  • New to Flies
  • Pers. comm.
  • Author guidelines
  • Contact FlyBase
• Archives
  • Prior Release
  • Other Archives
  • Coordinate Converter

Gene Dmel\CG11076

General Information
Symbol	Dmel\CG11076	Species	D. melanogaster
Name		Annotation symbol	CG11076
Feature type	protein_coding_gene	FlyBase ID	FBgn0039929
Gene Model Status	Current	Stock availability	3 publicly available
Genomic Location
Chromosome (arm)	4	Recombination map
Cytogenetic map	102F6-102F6	Sequence location	4:1,050,337..1,052,383 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG11076 (FBgn0039929). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 5 alleles are reported. The phenotype of these alleles is annotated with: trichogen cell. It has 3 annotated transcripts and 3 annotated polypeptides. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed at stages throughout embryogenesis, during early larval stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval/adult central nervous system, adult ovary, adult male accessory gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult spermathecae, adult testis, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1628279_s_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of CG11076. Gene sequence location is 4:1050337..1052383.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features BKN30205 HFA17197
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 102F6-102F6
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG11076 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.41
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG11076-RA FBtr0089221  NM_166807   1261   279 CG11076-RB FBtr0089220  NM_143686   1133   177 CG11076-RC FBtr0309864     1230   177
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG11076-PA   FBpp0088285   31.8   279   10.05     NP_726630   AAF59392 CG11076-PB   FBpp0088284   20.4   177   10.30     NP_651943   AAN06566 CG11076-PC   FBpp0301598   20.4   177   10.30
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA695921   AA696084   AE014135 AAF59392   AE014135 AAN06566   AI260533   AY071199 AAL48821   BG633646   BG636616   BI172484   BI216930   BI231312   BI352669   BI355888   BI357617   BI375517   BI641330   BP544236   BP544237   BP546002   BP554613   BP554614   BT099585   CO271804   CO280899   CO286921   CO292194   CO292713   CO298259   CO316883   CO331492   CZ471253   CZ473896   EC066543   EC198941   EC201109   EC216481   EC218851   EC224143   EC233909   EC235669   EC247973   ES693037   ES694851   EV576937   EV584603   EV585242   EV591354   EV591940   EV596372   GH741029   GH741714   GH742460   GH742732   GH743499   GH744317   GH744903   GH745177   GH745604   GH746448   GH746880   GH747075   GH747262   GH747405   GH747422   GH747482   GH762217   GH762696   GH762874   GH763273   GH764465   GH764571   GH764813   GH764818   GH765324   GH765819   GH765935   GH766921   GH766947   GH767917   GH768308   GH769315   GH770074   GH779551   GH779562   GH779737
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q7KQM8 Q9V493
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0039929    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0039929 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed at stages throughout embryogenesis, during early larval stages, in adult female stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0039929 expression level Developmental Stage   Expression Level embryo 00-02hr    6563 embryo 02-04hr    2739 embryo 04-06hr    5249 embryo 06-08hr    7132 embryo 08-10hr    7353 embryo 10-12hr    8441 embryo 12-14hr    7063 embryo 14-16hr    3657 embryo 16-18hr    4273 embryo 18-20hr    3362 embryo 20-22hr    5003 embryo 22-24hr    4864 larva L1    6858 larva L2    5001 larva L3 12hr old    3241 larva L3 puffstage 1-2    1176 larva L3 puffstage 3-6    1443 larva L3 puffstage 7-9    1872 white prepupae new    1667 white prepupae 12hr    1907 white prepupae 24hr    2308 pupae 2d postWPP    2694 pupae 3d postWPP    2140 pupae 4d postWPP    1329 adult male 01day    1580 adult male 05day    1653 adult male 30day    1304 adult female 01day    3115 adult female 05day    6724 adult female 30day    6589 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (6563) embryo 02-04hr  (2739) embryo 04-06hr  (5249) embryo 06-08hr  (7132) embryo 08-10hr  (7353) embryo 10-12hr  (8441) embryo 12-14hr  (7063) embryo 14-16hr  (3657) embryo 16-18hr  (4273) embryo 18-20hr  (3362) embryo 20-22hr  (5003) embryo 22-24hr  (4864) larva L1  (6858) larva L2  (5001) larva L3 12hr old  (3241) larva L3 puffstage 1-2  (1176) larva L3 puffstage 3-6  (1443) larva L3 puffstage 7-9  (1872) white prepupae new  (1667) white prepupae 12hr  (1907) white prepupae 24hr  (2308) pupae 2d postWPP  (2694) pupae 3d postWPP  (2140) pupae 4d postWPP  (1329) adult male 01day  (1580) adult male 05day  (1653) adult male 30day  (1304) adult female 01day  (3115) adult female 05day  (6724) adult female 30day  (6589) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (6563) embryo 02-04hr  (2739) embryo 04-06hr  (5249) embryo 06-08hr  (7132) embryo 08-10hr  (7353) embryo 10-12hr  (8441) embryo 12-14hr  (7063) embryo 14-16hr  (3657) embryo 16-18hr  (4273) embryo 18-20hr  (3362) embryo 20-22hr  (5003) embryo 22-24hr  (4864) larva L1  (6858) larva L2  (5001) larva L3 12hr old  (3241) larva L3 puffstage 1-2    1176 larva L3 puffstage 3-6  1443 larva L3 puffstage 7-9  (1872) white prepupae new  (1667) white prepupae 12hr  (1907) white prepupae 24hr  (2308) pupae 2d postWPP  (2694) pupae 3d postWPP  (2140) pupae 4d postWPP    1329 adult male 01day  (1580) adult male 05day  (1653) adult male 30day    1304 adult female 01day  (3115) adult female 05day  (6724) adult female 30day  (6589) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    6563 embryo 02-04hr    2739 embryo 04-06hr    5249 embryo 06-08hr    7132 embryo 08-10hr    7353 embryo 10-12hr    8441 embryo 12-14hr    7063 embryo 14-16hr    3657 embryo 16-18hr    4273 embryo 18-20hr    3362 embryo 20-22hr    5003 embryo 22-24hr    4864 larva L1    6858 larva L2    5001 larva L3 12hr old    3241 larva L3 puffstage 1-2    1176 larva L3 puffstage 3-6    1443 larva L3 puffstage 7-9    1872 white prepupae new    1667 white prepupae 12hr    1907 white prepupae 24hr    2308 pupae 2d postWPP    2694 pupae 3d postWPP    2140 pupae 4d postWPP    1329 adult male 01day    1580 adult male 05day    1653 adult male 30day    1304 adult female 01day    3115 adult female 05day    6724 adult female 30day    6589 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    6563 embryo 02-04hr    2739 embryo 04-06hr    5249 embryo 06-08hr    7132 embryo 08-10hr    7353 embryo 10-12hr    8441 embryo 12-14hr    7063 embryo 14-16hr    3657 embryo 16-18hr    4273 embryo 18-20hr    3362 embryo 20-22hr    5003 embryo 22-24hr    4864 larva L1    6858 larva L2    5001 larva L3 12hr old    3241 larva L3 puffstage 1-2    1176 larva L3 puffstage 3-6    1443 larva L3 puffstage 7-9    1872 white prepupae new    1667 white prepupae 12hr    1907 white prepupae 24hr    2308 pupae 2d postWPP    2694 pupae 3d postWPP    2140 pupae 4d postWPP    1329 adult male 01day    1580 adult male 05day    1653 adult male 30day    1304 adult female 01day    3115 adult female 05day    6724 adult female 30day    6589 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0039929 expression level Developmental Stage   Expression Level embryo 00-02hr    6563 embryo 02-04hr    2739 embryo 04-06hr    5249 embryo 06-08hr    7132 embryo 08-10hr    7353 embryo 10-12hr    8441 embryo 12-14hr    7063 embryo 14-16hr    3657 embryo 16-18hr    4273 embryo 18-20hr    3362 embryo 20-22hr    5003 embryo 22-24hr    4864 larva L1    6858 larva L2    5001 larva L3 12hr old    3241 larva L3 puffstage 1-2    1176 larva L3 puffstage 3-6    1443 larva L3 puffstage 7-9    1872 white prepupae new    1667 white prepupae 12hr    1907 white prepupae 24hr    2308 pupae 2d postWPP    2694 pupae 3d postWPP    2140 pupae 4d postWPP    1329 adult male 01day    1580 adult male 05day    1653 adult male 30day    1304 adult female 01day    3115 adult female 05day    6724 adult female 30day    6589 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (6563) embryo 02-04hr  (2739) embryo 04-06hr  (5249) embryo 06-08hr  (7132) embryo 08-10hr  (7353) embryo 10-12hr  (8441) embryo 12-14hr  (7063) embryo 14-16hr  (3657) embryo 16-18hr  (4273) embryo 18-20hr  (3362) embryo 20-22hr  (5003) embryo 22-24hr  (4864) larva L1  (6858) larva L2  (5001) larva L3 12hr old  (3241) larva L3 puffstage 1-2  (1176) larva L3 puffstage 3-6  (1443) larva L3 puffstage 7-9  (1872) white prepupae new  (1667) white prepupae 12hr  (1907) white prepupae 24hr  (2308) pupae 2d postWPP  (2694) pupae 3d postWPP  (2140) pupae 4d postWPP  (1329) adult male 01day  (1580) adult male 05day  (1653) adult male 30day  (1304) adult female 01day  (3115) adult female 05day  (6724) adult female 30day  (6589) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (6563) embryo 02-04hr  (2739) embryo 04-06hr  (5249) embryo 06-08hr  (7132) embryo 08-10hr  (7353) embryo 10-12hr  (8441) embryo 12-14hr  (7063) embryo 14-16hr  (3657) embryo 16-18hr  (4273) embryo 18-20hr  (3362) embryo 20-22hr  (5003) embryo 22-24hr  (4864) larva L1  (6858) larva L2  (5001) larva L3 12hr old  (3241) larva L3 puffstage 1-2    1176 larva L3 puffstage 3-6  1443 larva L3 puffstage 7-9  1872 white prepupae new  1667 white prepupae 12hr  1907 white prepupae 24hr  2308 pupae 2d postWPP  (2694) pupae 3d postWPP  2140 pupae 4d postWPP    1329 adult male 01day  1580 adult male 05day  1653 adult male 30day    1304 adult female 01day  (3115) adult female 05day  (6724) adult female 30day  (6589) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    6563 embryo 02-04hr    2739 embryo 04-06hr    5249 embryo 06-08hr    7132 embryo 08-10hr    7353 embryo 10-12hr    8441 embryo 12-14hr    7063 embryo 14-16hr    3657 embryo 16-18hr    4273 embryo 18-20hr    3362 embryo 20-22hr    5003 embryo 22-24hr    4864 larva L1    6858 larva L2    5001 larva L3 12hr old    3241 larva L3 puffstage 1-2    1176 larva L3 puffstage 3-6    1443 larva L3 puffstage 7-9    1872 white prepupae new    1667 white prepupae 12hr    1907 white prepupae 24hr    2308 pupae 2d postWPP    2694 pupae 3d postWPP    2140 pupae 4d postWPP    1329 adult male 01day    1580 adult male 05day    1653 adult male 30day    1304 adult female 01day    3115 adult female 05day    6724 adult female 30day    6589 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    6563 embryo 02-04hr    2739 embryo 04-06hr    5249 embryo 06-08hr    7132 embryo 08-10hr    7353 embryo 10-12hr    8441 embryo 12-14hr    7063 embryo 14-16hr    3657 embryo 16-18hr    4273 embryo 18-20hr    3362 embryo 20-22hr    5003 embryo 22-24hr    4864 larva L1    6858 larva L2    5001 larva L3 12hr old    3241 larva L3 puffstage 1-2    1176 larva L3 puffstage 3-6    1443 larva L3 puffstage 7-9    1872 white prepupae new    1667 white prepupae 12hr    1907 white prepupae 24hr    2308 pupae 2d postWPP    2694 pupae 3d postWPP    2140 pupae 4d postWPP    1329 adult male 01day    1580 adult male 05day    1653 adult male 30day    1304 adult female 01day    3115 adult female 05day    6724 adult female 30day    6589 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0039929    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0039929 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval/adult central nervous system, adult ovary, adult male accessory gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult spermathecae, adult testis, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0039929 expression level Tissue   Expression Level Larval Central Nervous System    520.7 Larval Midgut    149.2 Larval Hindgut    250.2 Larval Malpighian Tubules    170.7 Larval Fat Body    115.4 Larval Salivary Gland    405.6 Larval Trachea    440.85 Larval Carcass    224.7 Adult Head    354 Adult Eye    268.225 Adult Brain    657.8 Adult Thoracic-Abdominal Ganglion    714.8 Adult Crop    272.5 Adult Midgut    239.8 Adult Hindgut    207.8 Adult Malpighian Tubules    319.4 Adult Fat Body    319.2 Adult Salivary Gland    484.9 Adult Heart    284.05 Adult VirginFemale Spermatheca    246.8 Adult InseminatedFemale Spermatheca    316.5 Adult Ovary    846.4 Adult Testis    229.5 Adult Male Accessory Gland    554.3 Adult Carcass    236.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  520.7 Larval Midgut    149.2 Larval Hindgut    250.2 Larval Malpighian Tubules    170.7 Larval Fat Body    115.4 Larval Salivary Gland    405.6 Larval Trachea    440.85 Larval Carcass    224.7 Adult Head    354 Adult Eye    268.225 Adult Brain  (657.8) Adult Thoracic-Abdominal Ganglion  (714.8) Adult Crop    272.5 Adult Midgut    239.8 Adult Hindgut    207.8 Adult Malpighian Tubules    319.4 Adult Fat Body    319.2 Adult Salivary Gland    484.9 Adult Heart    284.05 Adult VirginFemale Spermatheca    246.8 Adult InseminatedFemale Spermatheca    316.5 Adult Ovary  (846.4) Adult Testis    229.5 Adult Male Accessory Gland  (554.3) Adult Carcass    236.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    520.7 Larval Midgut    149.2 Larval Hindgut    250.2 Larval Malpighian Tubules    170.7 Larval Fat Body    115.4 Larval Salivary Gland    405.6 Larval Trachea    440.85 Larval Carcass    224.7 Adult Head    354 Adult Eye    268.225 Adult Brain    657.8 Adult Thoracic-Abdominal Ganglion    714.8 Adult Crop    272.5 Adult Midgut    239.8 Adult Hindgut    207.8 Adult Malpighian Tubules    319.4 Adult Fat Body    319.2 Adult Salivary Gland    484.9 Adult Heart    284.05 Adult VirginFemale Spermatheca    246.8 Adult InseminatedFemale Spermatheca    316.5 Adult Ovary    846.4 Adult Testis    229.5 Adult Male Accessory Gland    554.3 Adult Carcass    236.9 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    520.7 Larval Midgut    149.2 Larval Hindgut    250.2 Larval Malpighian Tubules    170.7 Larval Fat Body    115.4 Larval Salivary Gland    405.6 Larval Trachea    440.85 Larval Carcass    224.7 Adult Head    354 Adult Eye    268.225 Adult Brain    657.8 Adult Thoracic-Abdominal Ganglion    714.8 Adult Crop    272.5 Adult Midgut    239.8 Adult Hindgut    207.8 Adult Malpighian Tubules    319.4 Adult Fat Body    319.2 Adult Salivary Gland    484.9 Adult Heart    284.05 Adult VirginFemale Spermatheca    246.8 Adult InseminatedFemale Spermatheca    316.5 Adult Ovary    846.4 Adult Testis    229.5 Adult Male Accessory Gland    554.3 Adult Carcass    236.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0039929 expression level Tissue   Expression Level Larval Central Nervous System    520.7 Larval Midgut    149.2 Larval Hindgut    250.2 Larval Malpighian Tubules    170.7 Larval Fat Body    115.4 Larval Salivary Gland    405.6 Larval Trachea    440.85 Larval Carcass    224.7 Adult Head    354 Adult Eye    268.225 Adult Brain    657.8 Adult Thoracic-Abdominal Ganglion    714.8 Adult Crop    272.5 Adult Midgut    239.8 Adult Hindgut    207.8 Adult Malpighian Tubules    319.4 Adult Fat Body    319.2 Adult Salivary Gland    484.9 Adult Heart    284.05 Adult VirginFemale Spermatheca    246.8 Adult InseminatedFemale Spermatheca    316.5 Adult Ovary    846.4 Adult Testis    229.5 Adult Male Accessory Gland    554.3 Adult Carcass    236.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  520.7 Larval Midgut    149.2 Larval Hindgut    250.2 Larval Malpighian Tubules    170.7 Larval Fat Body    115.4 Larval Salivary Gland    405.6 Larval Trachea    440.85 Larval Carcass    224.7 Adult Head    354 Adult Eye    268.225 Adult Brain  657.8 Adult Thoracic-Abdominal Ganglion  714.8 Adult Crop    272.5 Adult Midgut    239.8 Adult Hindgut    207.8 Adult Malpighian Tubules    319.4 Adult Fat Body    319.2 Adult Salivary Gland    484.9 Adult Heart    284.05 Adult VirginFemale Spermatheca    246.8 Adult InseminatedFemale Spermatheca    316.5 Adult Ovary  (846.4) Adult Testis    229.5 Adult Male Accessory Gland  554.3 Adult Carcass    236.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    520.7 Larval Midgut    149.2 Larval Hindgut    250.2 Larval Malpighian Tubules    170.7 Larval Fat Body    115.4 Larval Salivary Gland    405.6 Larval Trachea    440.85 Larval Carcass    224.7 Adult Head    354 Adult Eye    268.225 Adult Brain    657.8 Adult Thoracic-Abdominal Ganglion    714.8 Adult Crop    272.5 Adult Midgut    239.8 Adult Hindgut    207.8 Adult Malpighian Tubules    319.4 Adult Fat Body    319.2 Adult Salivary Gland    484.9 Adult Heart    284.05 Adult VirginFemale Spermatheca    246.8 Adult InseminatedFemale Spermatheca    316.5 Adult Ovary    846.4 Adult Testis    229.5 Adult Male Accessory Gland    554.3 Adult Carcass    236.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    520.7 Larval Midgut    149.2 Larval Hindgut    250.2 Larval Malpighian Tubules    170.7 Larval Fat Body    115.4 Larval Salivary Gland    405.6 Larval Trachea    440.85 Larval Carcass    224.7 Adult Head    354 Adult Eye    268.225 Adult Brain    657.8 Adult Thoracic-Abdominal Ganglion    714.8 Adult Crop    272.5 Adult Midgut    239.8 Adult Hindgut    207.8 Adult Malpighian Tubules    319.4 Adult Fat Body    319.2 Adult Salivary Gland    484.9 Adult Heart    284.05 Adult VirginFemale Spermatheca    246.8 Adult InseminatedFemale Spermatheca    316.5 Adult Ovary    846.4 Adult Testis    229.5 Adult Male Accessory Gland    554.3 Adult Carcass    236.9 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    354   NA  Eye    268.225   NA  Brain    657.8   520.7  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    714.8   NA  Crop    272.5   149.2  Midgut    239.8   250.2  Hindgut    207.8   170.7  Malpighian Tubules    319.4   115.4  Fat Body    319.2   405.6  Salivary Gland    484.9   NA  Heart    284.05   440.85  Trachea    NA   NA  VirginFemale Spermatheca    246.8   NA  InseminatedFemale Spermatheca    316.5   NA  Ovary    846.4   NA  Testis    229.5   NA  Male Accessory Gland    554.3   224.7  Carcass    236.9 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_08
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039929 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11076-RB FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG11076 Stages(s) 4-6 Stages(s) 9-10 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG11076GD7191 Other Phenotypes Allele visible, with Scer\GAL4pnr-MD237 CG11076GD7191 Phenotype manifest in Allele trichogen cell, with Scer\GAL4pnr-MD237 CG11076GD7191
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of CG11076 Class Mutagen Stocks Known lesion CG11076c06100 0 -- CG11076c07117 piggyBac transposase 0 -- CG11076d04380 P-element activity 0 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG11076 Class Mutagen Stocks Known lesion CG11076GD7191 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG11076KK110205 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD7191} NA P{KK110205} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions PBac{PB}CG11076c06100 NA PBac{PB}CG11076c07117 NA insertion of mobile activating element P{XP}CG11076d04380 NA
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG11076 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 68656 DroID - A comprehensive database of gene and protein interactions. • FBgn0039929 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 43830
Orthologs
Genome-wide drosophilid orthologs	Dana\GF20924 Dere\GG16423 Dgri\GH14702 Dmoj\GI21658 Dper\GL16016 Dpse\GA22816 Dsec\GM13014 Dsim\GD24362 Dvir\GJ16016 Dwil\GK25433 Dyak\GE14492
Curated drosophilid orthologs
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL015338-PA Aedes aegypti (mosquito) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0232096 FBgn0227392 FBgn0203201 FBgn0195708 FBgn0167945 FBgn0244218 FBgn0153620 FBgn0144388 FBgn0122178 FBgn0108654 FBgn0097929
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
VDRC	v105683 P{KK110205}VIE-260B v31417 w1118; P{GD7191}v31417 v31418 w1118; P{GD7191}v31418
Genomic Clones ( 1 )
	BACR13D24 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 77 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GM15303 RE24422
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GM05037 GM20294 LP04436 RE14990 RE20762 RE44227 RE63359 SD14363 SD24560
Other clones	33734 42125 71598 72240 73145 99000 162073 273125 CK01.81C.F4 Dmel_dig_013591_0609_1345 Dmel_dig_018227_0663_1827 Dmel_dig_018421_0674_1748 Dmel_neb_011412_0936_3153 Dmel_neb_014081_0367_0677 Dmel_neb_014728_0691_1753 EK064254 EK104706 EK155412 EK172633 EK199426 EK200815 EK266086 EK299945 FGC024G09 FGH101G09 FGM230G10 GM04773 GM32793 RC0-DE0001-140700-015-G10 RC0-DL0001-140700-112-D10 RP001005073 RP001005287 RP001006157 RP001006529 RP001006750 RP001007671 RP001010232 RP001010434 RP001010588 RP001011407 RP001011783 RP001013893 RP001014036 RP001019644 RP001019983 RP001021885 RP001023383 RP001024182 RP001024723 RP001027309 RP001031670 RP001033215 RP001033245 RP001036165 RP001036902 RP001037472 RP001038223 RP001038315 RP001041515 RP001045571 RP001048865 RP001050795 RP001051225 RP001051805 RP001052278 RP001056708
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0039929 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 43830
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
	dsRNA made from templates generated with primers directed against this gene results in a change in cell proliferation. (Guertin et al., 2006)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_143686 NM_166807 RefSeq (Proteins) • NP_651943 NP_726630 DDBJ / EMBL / GenBank • AAF59392 AAL48821 AAN06566 AY071199 BI216930 CZ471253 CZ473896 Entrez Gene - A searchable database of RefSeq genes. • 43830 UniProtKB/TrEMBL • Q7KQM8 Q9V493
Other Crossreferences
Linkouts
	BioGRID - A database of protein and genetic interactions • 68656 DroID - A comprehensive database of gene and protein interactions. • FBgn0039929 DRSC - Results from RNAi screens. • FBgn0039929 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0039929 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11076-RB FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0039929 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 43830 InParanoid A subset of ortholog calls from InParanoid. • AAEL015338-PA Aedes aegypti (mosquito) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 43830 modMine - Data generated by the modENCODE project. • FBgn0039929 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0232096 FBgn0227392 FBgn0203201 FBgn0195708 FBgn0167945 FBgn0244218 FBgn0153620 FBgn0144388 FBgn0122178 FBgn0108654 FBgn0097929
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG11076 (Guertin et al., 2006, Johansson et al., 2007, Keleman et al., 2009.8.5, Leung et al., 2010)
Name Synonym
Secondary FlyBase IDs
References ( 15 )
Research paper	Leung et al., 2010, Genetics 185(4): 1519--1534 Evolution of a Distinct Genomic Domain in Drosophila: Comparative Analysis of the Dot Chromosome in Drosophila melanogaster and Drosophila virilis. [FBrf0211495] Johansson et al., 2007, EMBO J. 26(9): 2307--2316 Painting of fourth and chromosome-wide regulation of the 4th chromosome in Drosophila melanogaster. [FBrf0202200] Guertin et al., 2006, Curr. Biol. 16(10): 958--970 Functional genomics identifies TOR-regulated genes that control growth and division. [FBrf0192539] Zinke et al., 2002, EMBO J. 21(22): 6162--6173 Nutrient control of gene expression in Drosophila: microarray analysis of starvation and sugar-dependent response. [FBrf0151960]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Levis, 2005.11.3, Suspect multiple cases, Exelixis lines. Suspect multiple cases, Exelixis lines. [FBrf0191549]
FlyBase analysis	FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. Genomic mapping of Exelixis insertion collection. [FBrf0184340] Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]