A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene SV5\T:SV5\V5

General Information
SymbolSV5\T:SV5\V5SpeciesR. Simian virus 5
NameAnnotation symbol
Feature typeengineered_foreign_regionFlyBase IDFBgn0040270
Gene Model StatusNot Applicable Stock availability None publicly available
Genomic Location
Chromosome (arm)Recombination map
Cytogenetic mapSequence location
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Automatically generated summary

See sections below for more information
This gene is referred to in FlyBase by the symbol T:SV5\V5 (FBgn0040270). It is a engineered_foreign_region from T:SV5. Its molecular function is unknown. The biological processes in which it is involved are not known. No alleles are reported. It has no annotated transcripts. Gene has not been localized to the genome sequence.
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Description
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FB2013_03
FB2013_02
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FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
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Comments on Gene Model
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Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
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Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
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DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
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Type
Symbol & Location
Additional Notes
References
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Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
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Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term
References
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Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
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Phenotype manifest in
Allele
hide Classical Alleles ( 0 )
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Allele of T:SV5\V5ClassMutagenStocksKnown lesion
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Allele of T:SV5\V5ClassMutagenStocksKnown lesion
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Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
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Interacts with
Please look at the allele data for full details of the genetic interactions
T:SV5\V5 allele
Gene
References
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hide OrthoDB Orthologs (0) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
Drosophila inclusive ortholog search
No orthologs identified
Dipteran inclusive ortholog search
No orthologs identified
Insect inclusive ortholog search
No orthologs identified
Arthropod inclusive ortholog search
No orthologs identified
Metazoa inclusive ortholog search
No orthologs identified
Ortholog(s) in Drosophila melanogaster (None identified)
No D. melanogaster orthologies identified
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Gene
OMIM
HGNC
hideAAA Orthologs (0) based on analysis using Dmel annotation version 4.3
No orthologs identified
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hide Genomic Clones ( 0 )
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cDNA Clones, Fully Sequenced
BDGP DGC clones
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Tags
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hide Tag or Foreign Gene Data
  • Foreign sequence; species == Simian virus 5; epitope tag == 'GKPIPNPLLGLDST' {14 amino acid sequence from the Simian virus 5 P/V proteins}.
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Sequence Crossreferences
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hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
T:SV5\V5
 
Name Synonym
Secondary FlyBase IDs
hide References ( 174 )
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hide Recent research papers ( 23 )
Avanesov et al., 2012, PLoS Genet. 8(2): e1002503
The Role of Glypicans in Wnt Inhibitory Factor-1 Activity and the Structural Basis of Wif1's Effects on Wnt and Hedgehog Signaling. [FBrf0217590]
Chen et al., 2012, Development 139(12): 2170--2176
Crossveinless d is a vitellogenin-like lipoprotein that binds BMPs and HSPGs, and is required for normal BMP signaling in the Drosophila wing. [FBrf0218386]
Duan et al., 2012, J. Cell Biol. 199(1): 169--185
Group I PAKs function downstream of Rac to promote podosome invasion during myoblast fusion in vivo. [FBrf0219579]
Fletcher et al., 2012, Curr. Biol. 22(12): 1116--1122
Positive feedback and mutual antagonism combine to polarize crumbs in the Drosophila follicle cell epithelium. [FBrf0218646]
Haskel-Ittah et al., 2012, Cell 150(5): 1016--1028
Self-organized shuttling: generating sharp dorsoventral polarity in the early Drosophila embryo. [FBrf0219335]
Helmstadter et al., 2012, PLoS ONE 7(7): e40300
Functional Study of Mammalian Neph Proteins in Drosophila melanogaster. [FBrf0218912]
Kallijärvi et al., 2012, PLoS ONE 7(12): e51997
Characterization of Drosophila GDNF Receptor-Like and Evidence for Its Evolutionarily Conserved Interaction with Neural Cell Adhesion Molecule (NCAM)/FasII. [FBrf0220419]
Kim et al., 2012, Genes Dev. 26(9): 974--987
Drosophila Neto is essential for clustering glutamate receptors at the neuromuscular junction. [FBrf0218161]
Sánchez-Hernández et al., 2012, Development 139(20): 3849--3858
The WIF domain of the human and Drosophila Wif-1 secreted factors confers specificity for Wnt or Hedgehog. [FBrf0219478]
Timofeev et al., 2012, Neuron 75(1): 80--93
Localized netrins act as positional cues to control layer-specific targeting of photoreceptor axons in Drosophila. [FBrf0218874]
Yao et al., 2012, Chromosoma 121(2): 209--220
The chromodomain-containing NH(2)-terminus of Chromator interacts with histone H1 and is required for correct targeting to chromatin. [FBrf0218885]
Hadjieconomou et al., 2011, Nat. Methods 8(3): 260--266
Flybow: genetic multicolor cell labeling for neural circuit analysis in Drosophila melanogaster. [FBrf0213120]
Hampel et al., 2011, Nat. Methods 8(3): 253--259
Drosophila Brainbow: a recombinase-based fluorescence labeling technique to subdivide neural expression patterns. [FBrf0213136]
Hara et al., 2011, J. Neurosci. 31(27): 9982--9990
Post-Translational Regulation and Nuclear Entry of TIMELESS and PERIOD Are Affected in New timeless Mutant. [FBrf0214253]
Lim et al., 2011, Nature 470(7334): 399--403
The novel gene twenty-four defines a critical translational step in the Drosophila clock. [FBrf0213059]
Luo et al., 2011, Development 138(13): 2761--2771
Direct targets of the D. melanogaster DSXF protein and the evolution of sexual development. [FBrf0213878]
Rauskolb et al., 2011, PLoS Biol. 9(6): e1000624
Zyxin links fat signaling to the hippo pathway. [FBrf0213900]
Venken et al., 2011, Nat. Methods 8(9): 737--743
MiMIC: a highly versatile transposon insertion resource for engineering Drosophila melanogaster genes. [FBrf0216331]
Xie et al., 2011, Insect Biochem. Mol. Biol. 41(3): 167--177
RNAi knockdown of dRNaseZ, the Drosophila homolog of ELAC2, impairs growth of mitotic and endoreplicating tissues. [FBrf0213094]
Xin et al., 2011, Development 138(22): 4955--4967
Erect Wing facilitates context-dependent Wnt/Wingless signaling by recruiting the cell-specific Armadillo-TCF adaptor Earthbound to chromatin. [FBrf0216486]
Zhang et al., 2011, Cell Res. 21(12): 1677--1690
SNX3 controls Wingless/Wnt secretion through regulating retromer-dependent recycling of Wntless. [FBrf0216871]
Zhang et al., 2011, J. Molec. Cell. Cardiol. 51(3): 381--389
Effects of different small HSPB members on contractile dysfunction and structural changes in a Drosophila melanogaster model for Atrial Fibrillation. [FBrf0214619]
Zheng et al., 2011, Dev. Biol. 357(1): 202--210
magu is required for germline stem cell self-renewal through BMP signaling in the Drosophila testis. [FBrf0214645]
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All reviews listed in FlyBase were published before 2011