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Gene Dmel\Or82a

General Information
Symbol	Dmel\Or82a	Species	D. melanogaster
Name	Odorant receptor 82a	Annotation symbol	CG31519
Feature type	protein_coding_gene	FlyBase ID	FBgn0041621
Gene Model Status	Current	Stock availability	4 publicly available
Also Known As	82a
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	82A1-82A1	Sequence location	3R:82,694..84,166 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Odorant receptor 82a is referred to in FlyBase by the symbol Dmel\Or82a (CG31519, FBgn0041621). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: olfactory receptor activity. There is experimental evidence that it is involved in the biological process: multicellular organism reproduction; detection of chemical stimulus involved in sensory perception of smell. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Olfactory receptor, Drosophila. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very low expression to a trough of extremely low expression. Peak expression observed within 12-24 hour embryonic stages, at stages throughout the larval period, during early pupal stages, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: No expression detected in any larval or adult organs/tissues. Comments on Affy2 ProbeSet: ProbeSet 1631317_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of Or82a. Gene sequence location is 3R:82694..84166.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 82A1-82A1   Limits computationally determined from genome sequence between P{PZ}l(3)0273302733 and P{EP}EP974
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Or82a for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.47
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Or82a-RA FBtr0078977  NM_164323   1158   385
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Or82a-PA   FBpp0078616   43.6   385   8.30     NP_730794   AAN13335
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Olfactory receptor, Drosophila (IPR004117)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014297 AAN13335
UniProtKB/Swiss-Prot	P82986
UniProtKB/TrEMBL
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference adult stage   adult olfactory receptor neuron Or82a   (Couto et al., 2005, Fishilevich and Vosshall, 2005) antennal lobe glomerulus VA6   (Fishilevich and Vosshall, 2005)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
extracellular space inferred from direct assay (Findlay et al., 2008) integral to membrane inferred from direct assay (Hallem and Carlson, 2006)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: No expression detected in any larval or adult organs/tissues. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    3.775 Larval Midgut    4.8 Larval Hindgut    3.7 Larval Malpighian Tubules    3.5 Larval Fat Body    6 Larval Salivary Gland    4.1 Larval Trachea    2.875 Larval Carcass    2.925 Adult Head    3.5 Adult Eye    4.875 Adult Brain    4.7 Adult Thoracic-Abdominal Ganglion    5.4 Adult Crop    2.1 Adult Midgut    8.5 Adult Hindgut    6 Adult Malpighian Tubules    3.4 Adult Fat Body    6 Adult Salivary Gland    10.8 Adult Heart    2.95 Adult VirginFemale Spermatheca    2.3 Adult InseminatedFemale Spermatheca    3.8 Adult Ovary    3.1 Adult Testis    2.2 Adult Male Accessory Gland    5.5 Adult Carcass    3.3 Expression Level Scale  None   Low  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    3.775 Larval Midgut    4.8 Larval Hindgut    3.7 Larval Malpighian Tubules    3.5 Larval Fat Body    6 Larval Salivary Gland    4.1 Larval Trachea    2.875 Larval Carcass    2.925 Adult Head    3.5 Adult Eye    4.875 Adult Brain    4.7 Adult Thoracic-Abdominal Ganglion    5.4 Adult Crop    2.1 Adult Midgut    8.5 Adult Hindgut    6 Adult Malpighian Tubules    3.4 Adult Fat Body    6 Adult Salivary Gland    10.8 Adult Heart    2.95 Adult VirginFemale Spermatheca    2.3 Adult InseminatedFemale Spermatheca    3.8 Adult Ovary    3.1 Adult Testis    2.2 Adult Male Accessory Gland    5.5 Adult Carcass    3.3 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    3.775 Larval Midgut    4.8 Larval Hindgut    3.7 Larval Malpighian Tubules    3.5 Larval Fat Body    6 Larval Salivary Gland    4.1 Larval Trachea    2.875 Larval Carcass    2.925 Adult Head    3.5 Adult Eye    4.875 Adult Brain    4.7 Adult Thoracic-Abdominal Ganglion    5.4 Adult Crop    2.1 Adult Midgut    8.5 Adult Hindgut    6 Adult Malpighian Tubules    3.4 Adult Fat Body    6 Adult Salivary Gland    10.8 Adult Heart    2.95 Adult VirginFemale Spermatheca    2.3 Adult InseminatedFemale Spermatheca    3.8 Adult Ovary    3.1 Adult Testis    2.2 Adult Male Accessory Gland    5.5 Adult Carcass    3.3 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    3.775 Larval Midgut    4.8 Larval Hindgut    3.7 Larval Malpighian Tubules    3.5 Larval Fat Body    6 Larval Salivary Gland    4.1 Larval Trachea    2.875 Larval Carcass    2.925 Adult Head    3.5 Adult Eye    4.875 Adult Brain    4.7 Adult Thoracic-Abdominal Ganglion    5.4 Adult Crop    2.1 Adult Midgut    8.5 Adult Hindgut    6 Adult Malpighian Tubules    3.4 Adult Fat Body    6 Adult Salivary Gland    10.8 Adult Heart    2.95 Adult VirginFemale Spermatheca    2.3 Adult InseminatedFemale Spermatheca    3.8 Adult Ovary    3.1 Adult Testis    2.2 Adult Male Accessory Gland    5.5 Adult Carcass    3.3 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    3.775 Larval Midgut    4.8 Larval Hindgut    3.7 Larval Malpighian Tubules    3.5 Larval Fat Body    6 Larval Salivary Gland    4.1 Larval Trachea    2.875 Larval Carcass    2.925 Adult Head    3.5 Adult Eye    4.875 Adult Brain    4.7 Adult Thoracic-Abdominal Ganglion    5.4 Adult Crop    2.1 Adult Midgut    8.5 Adult Hindgut    6 Adult Malpighian Tubules    3.4 Adult Fat Body    6 Adult Salivary Gland    10.8 Adult Heart    2.95 Adult VirginFemale Spermatheca    2.3 Adult InseminatedFemale Spermatheca    3.8 Adult Ovary    3.1 Adult Testis    2.2 Adult Male Accessory Gland    5.5 Adult Carcass    3.3 Expression Level Scale  None   Low  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    3.775 Larval Midgut    4.8 Larval Hindgut    3.7 Larval Malpighian Tubules    3.5 Larval Fat Body    6 Larval Salivary Gland    4.1 Larval Trachea    2.875 Larval Carcass    2.925 Adult Head    3.5 Adult Eye    4.875 Adult Brain    4.7 Adult Thoracic-Abdominal Ganglion    5.4 Adult Crop    2.1 Adult Midgut    8.5 Adult Hindgut    6 Adult Malpighian Tubules    3.4 Adult Fat Body    6 Adult Salivary Gland    10.8 Adult Heart    2.95 Adult VirginFemale Spermatheca    2.3 Adult InseminatedFemale Spermatheca    3.8 Adult Ovary    3.1 Adult Testis    2.2 Adult Male Accessory Gland    5.5 Adult Carcass    3.3 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    3.775 Larval Midgut    4.8 Larval Hindgut    3.7 Larval Malpighian Tubules    3.5 Larval Fat Body    6 Larval Salivary Gland    4.1 Larval Trachea    2.875 Larval Carcass    2.925 Adult Head    3.5 Adult Eye    4.875 Adult Brain    4.7 Adult Thoracic-Abdominal Ganglion    5.4 Adult Crop    2.1 Adult Midgut    8.5 Adult Hindgut    6 Adult Malpighian Tubules    3.4 Adult Fat Body    6 Adult Salivary Gland    10.8 Adult Heart    2.95 Adult VirginFemale Spermatheca    2.3 Adult InseminatedFemale Spermatheca    3.8 Adult Ovary    3.1 Adult Testis    2.2 Adult Male Accessory Gland    5.5 Adult Carcass    3.3 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    3.775 Larval Midgut    4.8 Larval Hindgut    3.7 Larval Malpighian Tubules    3.5 Larval Fat Body    6 Larval Salivary Gland    4.1 Larval Trachea    2.875 Larval Carcass    2.925 Adult Head    3.5 Adult Eye    4.875 Adult Brain    4.7 Adult Thoracic-Abdominal Ganglion    5.4 Adult Crop    2.1 Adult Midgut    8.5 Adult Hindgut    6 Adult Malpighian Tubules    3.4 Adult Fat Body    6 Adult Salivary Gland    10.8 Adult Heart    2.95 Adult VirginFemale Spermatheca    2.3 Adult InseminatedFemale Spermatheca    3.8 Adult Ovary    3.1 Adult Testis    2.2 Adult Male Accessory Gland    5.5 Adult Carcass    3.3 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    3.5   NA  Eye    4.875   NA  Brain    4.7   3.775  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    5.4   NA  Crop    2.1   4.8  Midgut    8.5   3.7  Hindgut    6   3.5  Malpighian Tubules    3.4   6  Fat Body    6   4.1  Salivary Gland    no informative data   NA  Heart    2.95   2.875  Trachea    NA   NA  VirginFemale Spermatheca    2.3   NA  InseminatedFemale Spermatheca    3.8   NA  Ovary    3.1   NA  Testis    2.2   NA  Male Accessory Gland    5.5   2.925  Carcass    3.3 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very low expression to a trough of extremely low expression. Peak expression observed within 12-24 hour embryonic stages, at stages throughout the larval period, during early pupal stages, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    1 embryo 22-24hr    1 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    1 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    1 embryo 22-24hr    1 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    1 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    1 embryo 22-24hr    1 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    1 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    1 embryo 22-24hr    1 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    1 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    1 embryo 22-24hr    1 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    1 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    1 embryo 22-24hr    1 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    1 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    1 embryo 22-24hr    1 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    1 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    0 embryo 12-14hr    0 embryo 14-16hr    0 embryo 16-18hr    0 embryo 18-20hr    0 embryo 20-22hr    1 embryo 22-24hr    1 larva L1    0 larva L2    0 larva L3 12hr old    0 larva L3 puffstage 1-2    0 larva L3 puffstage 3-6    0 larva L3 puffstage 7-9    0 white prepupae new    0 white prepupae 12hr    0 white prepupae 24hr    0 pupae 2d postWPP    0 pupae 3d postWPP    0 pupae 4d postWPP    0 adult male 01day    0 adult male 05day    0 adult male 30day    1 adult female 01day    0 adult female 05day    0 adult female 30day    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    1 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    1 leg disc CME L1    1 wing disc CME-W2    0 wing disc ML-DmD8    2 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    1 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    3 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    1 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    1 leg disc CME L1    1 wing disc CME-W2    0 wing disc ML-DmD8    2 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    1 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    3 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    1 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    1 leg disc CME L1    1 wing disc CME-W2    0 wing disc ML-DmD8    2 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    1 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    3 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    1 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    1 leg disc CME L1    1 wing disc CME-W2    0 wing disc ML-DmD8    2 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    1 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    3 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    0 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    1 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    1 leg disc CME L1    1 wing disc CME-W2    0 wing disc ML-DmD8    2 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    1 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    3 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    1 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    1 leg disc CME L1    1 wing disc CME-W2    0 wing disc ML-DmD8    2 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    1 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    3 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    1 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    1 leg disc CME L1    1 wing disc CME-W2    0 wing disc ML-DmD8    2 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    1 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    3 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    0 Schneider line 2 Sg4    1 embryonic 1182-4H    0 embryonic GM2    0 embryonic Kc167    0 embryonic S1    0 embryonic S3    1 leg disc CME L1    1 wing disc CME-W2    0 wing disc ML-DmD8    2 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    1 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    3 mixed discs ML-DmD4-c1    1 CNS ML-DmBG1-c1    0 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (Graveley et al., 2011) mE1_20_mRNA_expression_cluster_08
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0041621 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG31519-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 Or82aGD14868 Other Phenotypes Allele smell perception defective, with Scer\GAL4Or22a.8197 Or82aScer\UAS.T:Hsap\MYC Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of Or82a Class Mutagen Stocks Known lesion Or82aEY20192 P-element activity 1 --
Alleles Carried on Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Or82a Class Mutagen Stocks Known lesion Or82aGD14868 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes Or82aKK109906 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Or82aOr43b.T:nls-tra in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes Or82aScer\UAS.T:Hsap\MYC in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD14868} NA P{KK109906} NA P{UAS-Or82a.MYC} NA GAL4 construct P{Or82a-GAL4.C} No P{Or82a-GAL4.F} No characterization construct P{Or43b-Or82a.nls} NA P{Or82a-Mmus\Cd8a.GFP} NA P{Or82a-RFP.dsRed.nls} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EPgy2}Or82aEY20192 NA
Gene Ontology: Function, Process & Cellular Component ( 7 unique terms )
Terms Based on Experimental Evidence ( 5 terms )
Molecular Function
CV term Evidence References
olfactory receptor activity inferred from direct assay (Hallem and Carlson, 2006)
Biological Process
CV term Evidence References
detection of chemical stimulus involved in sensory perception of smell inferred from direct assay (Hallem and Carlson, 2006) multicellular organism reproduction inferred from expression pattern (Findlay et al., 2008)
Cellular Component
CV term Evidence References
extracellular space inferred from direct assay (Findlay et al., 2008) integral to membrane inferred from direct assay (Hallem and Carlson, 2006)
Terms Based on Predictions or Assertions ( 4 terms )
Molecular Function
CV term Evidence References
odorant binding inferred from electronic annotation with InterPro:IPR004117 (FlyBase Curators et al., 2004-) olfactory receptor activity inferred from sequence or structural similarity (Swiss-Prot Project Members, 2000.10.1) non-traceable author statement (Warr and Vosshall, 2000.5.19)
Biological Process
CV term Evidence References
sensory perception of smell inferred from sequence or structural similarity (Swiss-Prot Project Members, 2000.10.1) non-traceable author statement (Warr and Vosshall, 2000.5.19)
Cellular Component
CV term Evidence References
integral to membrane inferred from sequence or structural similarity (Swiss-Prot Project Members, 2000.10.1) non-traceable author statement (Warr and Vosshall, 2000.5.19)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Or82a allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0041621
Orthologs
OrthoDB Orthologs (29) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6VDQJG Dipteran inclusive ortholog search EOG6P2Q9X Insect inclusive ortholog search EOG6RV1MS Arthropod inclusive ortholog search No orthologs identified Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (EOG6VDQJG)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\Or82a     Drosophila simulans   Dsim\GD19712 Y   Drosophila sechellia   Dsec\GM10740 Y   Drosophila erecta   Dere\GG12241 Y   Drosophila yakuba   Dyak\GE25401 Y   Drosophila ananassae   Dana\GF18198 Y   Drosophila pseudoobscura pseudoobscura   Dpse\Or82a Y   Drosophila persimilis   Dper\GL12310 Y   Drosophila willistoni   Dwil\GK22520 Y   Drosophila willistoni   Dwil\GK22288     Drosophila virilis   Dvir\GJ14456 Y   Drosophila mojavensis   Dmoj\GI10849 Y   Drosophila grimshawi   Dgri\GH19067 Y
Orthologs in non-Drosophila Dipterans (EOG6P2Q9X)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Anopheles gambiae Malaria mosquito  Agam\GPROR35 Y Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ010907 Y
Orthologs in non-Dipteran Insects (EOG6RV1MS)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB45078 Y Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG037221 Y Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG037275 Y Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG036979 Y Atta cephalotes Leafcutter ant  Acep\ACEP18688 Y Atta cephalotes Leafcutter ant  Acep\ACEP18705 Y Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL23580 Y Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL13778 Y Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL13782 Y Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL13783 Y Linepithema humile Argentine ant  Lhum\LH26051 Y Tribolium castaneum Red flour beetle  Tcas\Or103 Y Tribolium castaneum Red flour beetle  Tcas\Or106 Y Tribolium castaneum Red flour beetle  Tcas\Or107 Y
Orthologs in non-Insect Arthropods (None identified)
No non-Insect Arthropod orthologies identified
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD19712 Drosophila sechellia Dsec\GM10740 Drosophila erecta Dere\GG12241 Drosophila yakuba Dyak\GE25401 Drosophila ananassae Dana\GF18198 Drosophila pseudoobscura pseudoobscura Dpse\Or82a Drosophila persimilis Dper\GL12310 Drosophila willistoni Dwil\GK22520 Drosophila virilis Dvir\GJ14456 Drosophila mojavensis Dmoj\GI10849 Drosophila grimshawi Dgri\GH19067
Stocks & Reagents
Stocks Listed in FlyBase ( 4 )
Bloomington	22369 y1 w67c23; P{EPgy2}Or82aEY20192
VDRC	v104532 P{KK109906}VIE-260B v29443 w1118; P{GD14868}v29443 v29441 w1118; P{GD14868}v29441/TM3
Genomic Clones ( 1 )
	BACR15O02 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 0 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0041621 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 318778
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: Or82a CG31519 (FlyBase, 1996-)
Additional comments	Source for merge of Or82a CG31519 was sequence comparison (date:030716). (FlyBase, 1996-)
Other Comments
	New annotation (CG31519) in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_164323 RefSeq (Proteins) • NP_730794 DDBJ / EMBL / GenBank • AAN13335 Entrez Gene - A searchable database of RefSeq genes. • 318778 UniProtKB/Swiss-Prot • P82986
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Olfactory receptor, Drosophila (IPR004117)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0041621 DRSC - Results from RNAi screens. • FBgn0041621 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0041621 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG31519-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0041621 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 318778 modMine - Data generated by the modENCODE project. • FBgn0041621
Synonyms & Secondary IDs ( 5 )
Reported As
Symbol Synonym	82a (Vogt et al., 2002, Masuda-Nakagawa et al., 2009) CG31519 (Metaxakis et al., 2005, Keleman et al., 2009.8.5, Robertson, 2009) DOR61 (Warr and Vosshall, 2000.5.19) Or82a (Hallem and Carlson, 2006, de Bruyne and Warr, 2006, Jafari et al., 2012, Schlief and Wilson, 2007, McBride et al., 2007, Marshall et al., 2010, Lieber et al., 2011, Hoare et al., 2011, Lattemann et al., 2007, Kreher et al., 2008, Kopp et al., 2008, Robertson, 2009, Zhou et al., 2009, Galizia et al., 2010, Montague et al., 2011, Endo et al., 2011)
Name Synonym	Odorant receptor 82a (Warr and Vosshall, 2000.5.19)
Secondary FlyBase IDs
	FBan0031519 FBgn0051519
References ( 40 )
Generate a list of	All references relating to this gene ( 40 )
List References by type	Research paper  ( 23 ) Supplementary material  ( 3 ) Review  ( 2 ) Personal communication to FlyBase  ( 7 ) FlyBase analysis  ( 3 ) Protein sequence record  ( 1 ) Letter  ( 1 )
Recent research papers ( 5 )
	Jafari et al., 2012, PLoS Biol. 10(3): e1001280 Combinatorial activation and repression by seven transcription factors specify Drosophila odorant receptor expression. [FBrf0217822] Endo et al., 2011, Nat. Neurosci. 15(2): 224--233 Chromatin modification of Notch targets in olfactory receptor neuron diversification. [FBrf0217319] Hoare et al., 2011, PLoS ONE 6(8): e22996 Modeling peripheral olfactory coding in Drosophila larvae. [FBrf0214697] Lieber et al., 2011, Neuron 69(3): 468--481 DSL-Notch Signaling in the Drosophila Brain in Response to Olfactory Stimulation. [FBrf0212999] Montague et al., 2011, J. Neurosci. 31(21): 7891--7899 Similar odorants elicit different behavioral and physiological responses, some supersustained. [FBrf0213787] Show all research papers ...
Recent reviews (0)
	All reviews listed in FlyBase were published before 2011 Show reviews ...