• Home
• Tools
  • Tools Overview
  • Query Tools

    
    • QuickSearch
    • QueryBuilder
    • TermLink
    • CytoSearch
    • Interactions Browser
    • ImageBrowse
    • Find A Person
    • Google™ FlyBase
  • Genomic/Map Tools

    
    • BLAST
    • GBrowse
    • CytoSearch
    • Aberrations Maps
    • Chromosome Maps
    • Coordinates Converter
  • Retrieve/Convert

    
    • Batch Download
    • Coordinates Converter
    • ID Converter
  • Data Submission

    
    • Fast-Track Your Paper
    • Submit Personal Comm
    • Add A New Person
    • Update Person Info
  • People

    
    • Find A Person
    • Add A New Person
    • Update Person Info
• Files
  • Files Overview
  • Downloads:
  • Precomputed files
  • Archived data
  • Releases (FTP)
  • Genomes (FTP)
  • AAA data (FTP)
  • Lists:
  • Transposons (Dmel)
  • Transposons (other)
  • Vectors & Constructs
  • Anatomical Terms
  • Map Conversion
• Species
  • Phylogeny
  • Sequenced Species
  • Synteny Table
  • Color Illustrations
  • Abbreviations
• Documents
  • About FlyBase
  • Reference Manual:
  • Sections
  • Contents
  • Nomenclature
  • Release Notes
• Resources
  • All Resources
  • Model Organisms
  • Stock Collections
  • Other links:
  • BDGP
  • DGRC
  • FlyExpress
  • Interactive Fly
  • modENCODE
  • Textpresso for Fly
• News
  • News
  • FlyBase Forum
  • FlyBase Positions
  • Meetings
  • Courses
  • Fly Board
  • White papers
  • Funding
  • bionet.dros
• Help
  • Google™ FlyBase
  • Site Map
  • FAQs
  • FlyBase Guides
  • Video Tutorials
  • Report help
  • New to Flies
  • Pers. comm.
  • Author guidelines
  • Contact FlyBase
• Archives
  • Prior Release
  • Other Archives
  • Coordinate Converter

Gene Dmel\yellow-e

General Information
Symbol	Dmel\yellow-e	Species	D. melanogaster
Name	yellow-e	Annotation symbol	CG9792
Feature type	protein_coding_gene	FlyBase ID	FBgn0041711
Gene Model Status	Current	Stock availability	5 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	87E10-87E10	Sequence location	3R:9,235,264..9,241,006 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene yellow-e is referred to in FlyBase by the symbol Dmel\yellow-e (CG9792, FBgn0041711). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Major royal jelly-related; Six-bladed beta-propeller, TolB-like. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression. Peak expression observed during late larval stages, during late pupal stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: larval hindgut, larval trachea, adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1627855_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of yellow-e. Gene sequence location is 3R:9235264..9241006.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features BKN26243 HFA12966 HFA16563
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 87E10-87E10   Limits computationally determined from genome sequence between P{PZ}CtBP03463 and P{lacW}B52s2249&P{lacW}flflL4179
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\yellow-e for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) yellow-e-RA FBtr0082757  NM_079620   1843   530
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein yellow-e-PA   FBpp0082225   58.7   530   7.00     NP_524344   AAF54948
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Major royal jelly-related (IPR003534) Six-bladed beta-propeller, TolB-like (IPR011042)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA202342   AE014297 AAF54948   AY071489 AAL49111   BI369377   BI609152   BI616557   BI616799   BI617338   CO275526   CZ466624   CZ466625   EC075448   EC075613   EC221053
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VFV1
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0041711    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0041711 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression. Peak expression observed during late larval stages, during late pupal stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0041711 expression level Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    66 embryo 04-06hr    90 embryo 06-08hr    12 embryo 08-10hr    20 embryo 10-12hr    41 embryo 12-14hr    26 embryo 14-16hr    254 embryo 16-18hr    590 embryo 18-20hr    418 embryo 20-22hr    78 embryo 22-24hr    105 larva L1    90 larva L2    309 larva L3 12hr old    518 larva L3 puffstage 1-2    3406 larva L3 puffstage 3-6    5934 larva L3 puffstage 7-9    6840 white prepupae new    2323 white prepupae 12hr    116 white prepupae 24hr    87 pupae 2d postWPP    2726 pupae 3d postWPP    5191 pupae 4d postWPP    3375 adult male 01day    1433 adult male 05day    640 adult male 30day    551 adult female 01day    883 adult female 05day    163 adult female 30day    117 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    66 embryo 04-06hr    90 embryo 06-08hr    12 embryo 08-10hr    20 embryo 10-12hr    41 embryo 12-14hr    26 embryo 14-16hr  (254) embryo 16-18hr  (590) embryo 18-20hr  (418) embryo 20-22hr    78 embryo 22-24hr  105 larva L1    90 larva L2  (309) larva L3 12hr old  (518) larva L3 puffstage 1-2  (3406) larva L3 puffstage 3-6  (5934) larva L3 puffstage 7-9  (6840) white prepupae new  (2323) white prepupae 12hr  (116) white prepupae 24hr    87 pupae 2d postWPP  (2726) pupae 3d postWPP  (5191) pupae 4d postWPP  (3375) adult male 01day  (1433) adult male 05day  (640) adult male 30day  (551) adult female 01day  (883) adult female 05day  (163) adult female 30day  (117) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    66 embryo 04-06hr    90 embryo 06-08hr    12 embryo 08-10hr    20 embryo 10-12hr    41 embryo 12-14hr    26 embryo 14-16hr    254 embryo 16-18hr    590 embryo 18-20hr    418 embryo 20-22hr    78 embryo 22-24hr    105 larva L1    90 larva L2    309 larva L3 12hr old    518 larva L3 puffstage 1-2  (3406) larva L3 puffstage 3-6  (5934) larva L3 puffstage 7-9  (6840) white prepupae new  (2323) white prepupae 12hr    116 white prepupae 24hr    87 pupae 2d postWPP  (2726) pupae 3d postWPP  (5191) pupae 4d postWPP  (3375) adult male 01day  1433 adult male 05day    640 adult male 30day    551 adult female 01day    883 adult female 05day    163 adult female 30day    117 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    66 embryo 04-06hr    90 embryo 06-08hr    12 embryo 08-10hr    20 embryo 10-12hr    41 embryo 12-14hr    26 embryo 14-16hr    254 embryo 16-18hr    590 embryo 18-20hr    418 embryo 20-22hr    78 embryo 22-24hr    105 larva L1    90 larva L2    309 larva L3 12hr old    518 larva L3 puffstage 1-2    3406 larva L3 puffstage 3-6    5934 larva L3 puffstage 7-9    6840 white prepupae new    2323 white prepupae 12hr    116 white prepupae 24hr    87 pupae 2d postWPP    2726 pupae 3d postWPP    5191 pupae 4d postWPP    3375 adult male 01day    1433 adult male 05day    640 adult male 30day    551 adult female 01day    883 adult female 05day    163 adult female 30day    117 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    66 embryo 04-06hr    90 embryo 06-08hr    12 embryo 08-10hr    20 embryo 10-12hr    41 embryo 12-14hr    26 embryo 14-16hr    254 embryo 16-18hr    590 embryo 18-20hr    418 embryo 20-22hr    78 embryo 22-24hr    105 larva L1    90 larva L2    309 larva L3 12hr old    518 larva L3 puffstage 1-2    3406 larva L3 puffstage 3-6    5934 larva L3 puffstage 7-9    6840 white prepupae new    2323 white prepupae 12hr    116 white prepupae 24hr    87 pupae 2d postWPP    2726 pupae 3d postWPP    5191 pupae 4d postWPP    3375 adult male 01day    1433 adult male 05day    640 adult male 30day    551 adult female 01day    883 adult female 05day    163 adult female 30day    117 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0041711 expression level Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    66 embryo 04-06hr    90 embryo 06-08hr    12 embryo 08-10hr    20 embryo 10-12hr    41 embryo 12-14hr    26 embryo 14-16hr    254 embryo 16-18hr    590 embryo 18-20hr    418 embryo 20-22hr    78 embryo 22-24hr    105 larva L1    90 larva L2    309 larva L3 12hr old    518 larva L3 puffstage 1-2    3406 larva L3 puffstage 3-6    5934 larva L3 puffstage 7-9    6840 white prepupae new    2323 white prepupae 12hr    116 white prepupae 24hr    87 pupae 2d postWPP    2726 pupae 3d postWPP    5191 pupae 4d postWPP    3375 adult male 01day    1433 adult male 05day    640 adult male 30day    551 adult female 01day    883 adult female 05day    163 adult female 30day    117 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    66 embryo 04-06hr    90 embryo 06-08hr    12 embryo 08-10hr    20 embryo 10-12hr    41 embryo 12-14hr    26 embryo 14-16hr  (254) embryo 16-18hr  (590) embryo 18-20hr  (418) embryo 20-22hr    78 embryo 22-24hr  105 larva L1    90 larva L2  (309) larva L3 12hr old  (518) larva L3 puffstage 1-2  (3406) larva L3 puffstage 3-6  (5934) larva L3 puffstage 7-9  (6840) white prepupae new  (2323) white prepupae 12hr  116 white prepupae 24hr    87 pupae 2d postWPP  (2726) pupae 3d postWPP  (5191) pupae 4d postWPP  (3375) adult male 01day  (1433) adult male 05day  (640) adult male 30day  (551) adult female 01day  (883) adult female 05day  (163) adult female 30day  117 Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    66 embryo 04-06hr    90 embryo 06-08hr    12 embryo 08-10hr    20 embryo 10-12hr    41 embryo 12-14hr    26 embryo 14-16hr    254 embryo 16-18hr    590 embryo 18-20hr    418 embryo 20-22hr    78 embryo 22-24hr    105 larva L1    90 larva L2    309 larva L3 12hr old    518 larva L3 puffstage 1-2  (3406) larva L3 puffstage 3-6  (5934) larva L3 puffstage 7-9  (6840) white prepupae new  2323 white prepupae 12hr    116 white prepupae 24hr    87 pupae 2d postWPP  (2726) pupae 3d postWPP  (5191) pupae 4d postWPP  (3375) adult male 01day  1433 adult male 05day    640 adult male 30day    551 adult female 01day    883 adult female 05day    163 adult female 30day    117 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    66 embryo 04-06hr    90 embryo 06-08hr    12 embryo 08-10hr    20 embryo 10-12hr    41 embryo 12-14hr    26 embryo 14-16hr    254 embryo 16-18hr    590 embryo 18-20hr    418 embryo 20-22hr    78 embryo 22-24hr    105 larva L1    90 larva L2    309 larva L3 12hr old    518 larva L3 puffstage 1-2    3406 larva L3 puffstage 3-6    5934 larva L3 puffstage 7-9    6840 white prepupae new    2323 white prepupae 12hr    116 white prepupae 24hr    87 pupae 2d postWPP    2726 pupae 3d postWPP    5191 pupae 4d postWPP    3375 adult male 01day    1433 adult male 05day    640 adult male 30day    551 adult female 01day    883 adult female 05day    163 adult female 30day    117 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    66 embryo 04-06hr    90 embryo 06-08hr    12 embryo 08-10hr    20 embryo 10-12hr    41 embryo 12-14hr    26 embryo 14-16hr    254 embryo 16-18hr    590 embryo 18-20hr    418 embryo 20-22hr    78 embryo 22-24hr    105 larva L1    90 larva L2    309 larva L3 12hr old    518 larva L3 puffstage 1-2    3406 larva L3 puffstage 3-6    5934 larva L3 puffstage 7-9    6840 white prepupae new    2323 white prepupae 12hr    116 white prepupae 24hr    87 pupae 2d postWPP    2726 pupae 3d postWPP    5191 pupae 4d postWPP    3375 adult male 01day    1433 adult male 05day    640 adult male 30day    551 adult female 01day    883 adult female 05day    163 adult female 30day    117 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0041711    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0041711 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: larval hindgut, larval trachea, adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0041711 expression level Tissue   Expression Level Larval Central Nervous System    4.825 Larval Midgut    6.2 Larval Hindgut    391 Larval Malpighian Tubules    6.4 Larval Fat Body    5.5 Larval Salivary Gland    4.1 Larval Trachea    126.325 Larval Carcass    1508.15 Adult Head    94.3 Adult Eye    34.15 Adult Brain    4.5 Adult Thoracic-Abdominal Ganglion    8.9 Adult Crop no informative data Adult Midgut    4.9 Adult Hindgut    20.6 Adult Malpighian Tubules    6.7 Adult Fat Body    4.8 Adult Salivary Gland no informative data Adult Heart    4.65 Adult VirginFemale Spermatheca    6.4 Adult InseminatedFemale Spermatheca    4.7 Adult Ovary    2.1 Adult Testis    3.3 Adult Male Accessory Gland    7.1 Adult Carcass    317.1 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    4.825 Larval Midgut    6.2 Larval Hindgut    391 Larval Malpighian Tubules    6.4 Larval Fat Body    5.5 Larval Salivary Gland    4.1 Larval Trachea    126.325 Larval Carcass  (1508.15) Adult Head    94.3 Adult Eye    34.15 Adult Brain    4.5 Adult Thoracic-Abdominal Ganglion    8.9 Adult Crop no informative data Adult Midgut    4.9 Adult Hindgut    20.6 Adult Malpighian Tubules    6.7 Adult Fat Body    4.8 Adult Salivary Gland no informative data Adult Heart    4.65 Adult VirginFemale Spermatheca    6.4 Adult InseminatedFemale Spermatheca    4.7 Adult Ovary    2.1 Adult Testis    3.3 Adult Male Accessory Gland    7.1 Adult Carcass    317.1 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    4.825 Larval Midgut    6.2 Larval Hindgut    391 Larval Malpighian Tubules    6.4 Larval Fat Body    5.5 Larval Salivary Gland    4.1 Larval Trachea    126.325 Larval Carcass  (1508.15) Adult Head    94.3 Adult Eye    34.15 Adult Brain    4.5 Adult Thoracic-Abdominal Ganglion    8.9 Adult Crop no informative data Adult Midgut    4.9 Adult Hindgut    20.6 Adult Malpighian Tubules    6.7 Adult Fat Body    4.8 Adult Salivary Gland no informative data Adult Heart    4.65 Adult VirginFemale Spermatheca    6.4 Adult InseminatedFemale Spermatheca    4.7 Adult Ovary    2.1 Adult Testis    3.3 Adult Male Accessory Gland    7.1 Adult Carcass    317.1 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    4.825 Larval Midgut    6.2 Larval Hindgut    391 Larval Malpighian Tubules    6.4 Larval Fat Body    5.5 Larval Salivary Gland    4.1 Larval Trachea    126.325 Larval Carcass    1508.15 Adult Head    94.3 Adult Eye    34.15 Adult Brain    4.5 Adult Thoracic-Abdominal Ganglion    8.9 Adult Crop no informative data Adult Midgut    4.9 Adult Hindgut    20.6 Adult Malpighian Tubules    6.7 Adult Fat Body    4.8 Adult Salivary Gland no informative data Adult Heart    4.65 Adult VirginFemale Spermatheca    6.4 Adult InseminatedFemale Spermatheca    4.7 Adult Ovary    2.1 Adult Testis    3.3 Adult Male Accessory Gland    7.1 Adult Carcass    317.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0041711 expression level Tissue   Expression Level Larval Central Nervous System    4.825 Larval Midgut    6.2 Larval Hindgut    391 Larval Malpighian Tubules    6.4 Larval Fat Body    5.5 Larval Salivary Gland    4.1 Larval Trachea    126.325 Larval Carcass    1508.15 Adult Head    94.3 Adult Eye    34.15 Adult Brain    4.5 Adult Thoracic-Abdominal Ganglion    8.9 Adult Crop no informative data Adult Midgut    4.9 Adult Hindgut    20.6 Adult Malpighian Tubules    6.7 Adult Fat Body    4.8 Adult Salivary Gland no informative data Adult Heart    4.65 Adult VirginFemale Spermatheca    6.4 Adult InseminatedFemale Spermatheca    4.7 Adult Ovary    2.1 Adult Testis    3.3 Adult Male Accessory Gland    7.1 Adult Carcass    317.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    4.825 Larval Midgut    6.2 Larval Hindgut    391 Larval Malpighian Tubules    6.4 Larval Fat Body    5.5 Larval Salivary Gland    4.1 Larval Trachea    126.325 Larval Carcass  (1508.15) Adult Head    94.3 Adult Eye    34.15 Adult Brain    4.5 Adult Thoracic-Abdominal Ganglion    8.9 Adult Crop no informative data Adult Midgut    4.9 Adult Hindgut    20.6 Adult Malpighian Tubules    6.7 Adult Fat Body    4.8 Adult Salivary Gland no informative data Adult Heart    4.65 Adult VirginFemale Spermatheca    6.4 Adult InseminatedFemale Spermatheca    4.7 Adult Ovary    2.1 Adult Testis    3.3 Adult Male Accessory Gland    7.1 Adult Carcass    317.1 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    4.825 Larval Midgut    6.2 Larval Hindgut    391 Larval Malpighian Tubules    6.4 Larval Fat Body    5.5 Larval Salivary Gland    4.1 Larval Trachea    126.325 Larval Carcass  1508.15 Adult Head    94.3 Adult Eye    34.15 Adult Brain    4.5 Adult Thoracic-Abdominal Ganglion    8.9 Adult Crop no informative data Adult Midgut    4.9 Adult Hindgut    20.6 Adult Malpighian Tubules    6.7 Adult Fat Body    4.8 Adult Salivary Gland no informative data Adult Heart    4.65 Adult VirginFemale Spermatheca    6.4 Adult InseminatedFemale Spermatheca    4.7 Adult Ovary    2.1 Adult Testis    3.3 Adult Male Accessory Gland    7.1 Adult Carcass    317.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    4.825 Larval Midgut    6.2 Larval Hindgut    391 Larval Malpighian Tubules    6.4 Larval Fat Body    5.5 Larval Salivary Gland    4.1 Larval Trachea    126.325 Larval Carcass    1508.15 Adult Head    94.3 Adult Eye    34.15 Adult Brain    4.5 Adult Thoracic-Abdominal Ganglion    8.9 Adult Crop no informative data Adult Midgut    4.9 Adult Hindgut    20.6 Adult Malpighian Tubules    6.7 Adult Fat Body    4.8 Adult Salivary Gland no informative data Adult Heart    4.65 Adult VirginFemale Spermatheca    6.4 Adult InseminatedFemale Spermatheca    4.7 Adult Ovary    2.1 Adult Testis    3.3 Adult Male Accessory Gland    7.1 Adult Carcass    317.1 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop no informative data Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland no informative data Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    94.3   NA  Eye    34.15   NA  Brain    4.5   4.825  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    8.9   NA  Crop    no informative data   6.2  Midgut    4.9   391  Hindgut    20.6   6.4  Malpighian Tubules    6.7   5.5  Fat Body    4.8   4.1  Salivary Gland    no informative data   NA  Heart    4.65   126.325  Trachea    NA   NA  VirginFemale Spermatheca    6.4   NA  InseminatedFemale Spermatheca    4.7   NA  Ovary    2.1   NA  Testis    3.3   NA  Male Accessory Gland    7.1   1508.15  Carcass    317.1 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_04
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0041711 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG9792-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable yellow-ec00645 viable, with Scer\GAL4pnr-MD237 yellow-eGD5642 Sterility Allele fertile yellow-ec00645 Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of yellow-e Class Mutagen Stocks Known lesion yellow-ec00645 piggyBac transposase 2 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of yellow-e Class Mutagen Stocks Known lesion yellow-eGD5642 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes yellow-eKK106243 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel7320 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD5642} NA P{KK106243} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions PBac{PB}yellow-ec00645 NA
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
	There is no information supporting a biological process, cellular component or molecular function term for this gene. (Based on a review of available data before: 2006)
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions yellow-e allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0041711
Orthologs
Genome-wide drosophilid orthologs	Dana\GF17380 Dere\GG17050 Dgri\GH18542 Dmoj\GI23241 Dper\GL23985 Dpse\GA22039 Dsec\GM25935 Dsim\GD20497 Dvir\GJ10736 Dwil\GK13342 Dyak\GE24438
Curated drosophilid orthologs	Dpse\GA22039
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AGAP004135-PA Anopheles gambiae (mosquito) XP_001948479.1 Acyrthosiphon pisum (pea aphid) BGIBMGA007253-PA Bombyx mori (silk worm) CPIJ005788 Culex pipens (mosquito) XP_001603485.1 Nasonia vitripennis (wasp) PHUM009598-PA Pediculus humanus (human body louse) XP_001812634.1 Tribolium castaneum (red flour beetle) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV16650 LH21402 FBgn0241555 FBgn0215351 FBgn0198013 FBgn0191968 FBgn0180791 FBgn0082023 FBgn0161575 FBgn0145968 FBgn0126009 FBgn0109278 FBgn0094398 CPIJ005788 BGIBMGA007253 ACYPI000479 GB17225 AGAP004135 AAEL011699 PHUM430010 GLEAN_06227
Stocks & Reagents
Stocks Listed in FlyBase ( 5 )
Bloomington	10209 w1118; PBac{PB}yellow-ec00645
Harvard	- PBac{PB}yellow-ec00645
VDRC	v100926 P{KK106243}VIE-260B v16632 w1118; P{GD5642}v16632 v16633 w1118; P{GD5642}v16633
Genomic Clones ( 1 )
	BACR06H18 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 10 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE55542
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	LD02493 RH13903 RH46552 RH46876 RH47638
Other clones	15108 77116 79065 EK117828
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0041711 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41653
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: yellow-e CG9792 (FlyBase, 1996-)
Additional comments	Source for merge of yellow-e CG9792 was sequence comparison (date:010117). (FlyBase, 1996-)
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_079620 RefSeq (Proteins) • NP_524344 DDBJ / EMBL / GenBank • AA202342 AAF54948 AAL49111 AY071489 BI369377 CZ466624 CZ466625 Entrez Gene - A searchable database of RefSeq genes. • 41653 UniProtKB/TrEMBL • Q9VFV1
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Major royal jelly-related (IPR003534) Six-bladed beta-propeller, TolB-like (IPR011042)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0041711 DRSC - Results from RNAi screens. • FBgn0041711 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0041711 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG9792-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0041711 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 41653 InParanoid A subset of ortholog calls from InParanoid. • AGAP004135-PA Anopheles gambiae (mosquito) XP_001948479.1 Acyrthosiphon pisum (pea aphid) BGIBMGA007253-PA Bombyx mori (silk worm) CPIJ005788 Culex pipens (mosquito) XP_001603485.1 Nasonia vitripennis (wasp) PHUM009598-PA Pediculus humanus (human body louse) XP_001812634.1 Tribolium castaneum (red flour beetle) modMine - Data generated by the modENCODE project. • FBgn0041711 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV16650 LH21402 FBgn0241555 FBgn0215351 FBgn0198013 FBgn0191968 FBgn0180791 FBgn0082023 FBgn0161575 FBgn0145968 FBgn0126009 FBgn0109278 FBgn0094398 CPIJ005788 BGIBMGA007253 ACYPI000479 GB17225 AGAP004135 AAEL011699 PHUM430010 GLEAN_06227
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	CG9792 (Keleman et al., 2009.8.5) yellow-e
Name Synonym	yellow-e (Maleszka and Kucharski, 2000)
Secondary FlyBase IDs
	FBgn0038152
References ( 14 )
Research paper	Baycin-Hizal et al., 2011, J. Proteome Res. 10(6): 2777--2784 GlycoFly: A Database of Drosophila N-linked Glycoproteins Identified Using SPEG-MS Techniques. [FBrf0213834] Drapeau, 2001, Biochem. biophys. Res. Commun. 281(3): 611--613 The family of Yellow-Related Drosophila melanogaster proteins. [FBrf0134468] Maleszka and Kucharski, 2000, Biochem. biophys. Res. Commun. 270(3): 773--776 Analysis of Drosophila yellow-B cDNA reveals a new family of proteins related to the royal jelly proteins in the Honeybee and to an orphan protein in an unusual bacterium Deinococcus radiodurans. [FBrf0127215]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase. Exelixis insertion alleles that are not in FlyBase. [FBrf0179797] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase Curators, 2002-, Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. [FBrf0159398] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]
Computer file	Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. Genomic mapping of Exelixis insertion collection. [FBrf0184340] Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]