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Gene Dmel\CR18854

General Information
Symbol	Dmel\CR18854	Species	D. melanogaster
Name		Annotation symbol	CR18854
Feature type	pseudogene_attribute	FlyBase ID	FBgn0042174
Gene Model Status	Current	Stock availability	4 publicly available
Also Known As	CG18854, CG13122
Genomic Location
Chromosome (arm)	2L	Recombination map
Cytogenetic map	30D1-30D1	Sequence location	2L:9,787,279..9,790,745 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CR18854 (FBgn0042174). It is a pseudogene_attribute from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: inositol-1,4,5-trisphosphate 3-kinase activity. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of low expression. Peak expression observed during late larval stages, during early pupal stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, larval trachea, adult spermathecae, adult male accessory gland, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult midgut, larval fat body, adult ovary, adult testis. Comments on Affy2 ProbeSet: ProbeSet 1633135_s_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of CR18854. Gene sequence location is 2L:9787279..9790745.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 30D1-30D1   Limits computationally determined from genome sequence between P{lacW}zf30Ck02506&P{EP}undEP424 and P{lacW}l(2)k06416k06416&P{lacW}sopk04603
Experimentally Determined Cytological Location
Cytogenetic map Notes References 30D-30D     (Gray, 2000.3.23)
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CR18854 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	antisense_gene ; SO:0000077 Supported by strand-specific RNA-Seq data. Gene model reviewed during 5.47 Pseudogene: incorporates a pseudogene similar to CG4036; proximate; partial. Antisense (in part): 3' portion overlaps IP3K1 on opposite strand.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt)   CR18854-RB FBtr0302441     2566   CR18854-RC FBtr0079919     2514
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence   Name AA567562   AA568025   AA696542   AA697345   AA697376   AA697538   AA697730   AA697898   AA698139   AA801570   AA820395   AA949369   AA979599   AF248501   AF248502   AI062925   AI238729   AI258686   AI258835   AI296247   AI404006   AI404534   AI455412   AY061008   BF496615   BG636397   BI232973   BI372410   BI563919   BI567700   BI572338   BI583795   BI585813   BI587695   BI606459   BI617658   BI618517   BI620056   BI626464   BI633346   BI634754   BI640239   BI640378   BI641830   BT001425 AAN71180   BT001500 AAN71255   BT021254 AAX33402   CK132001   CK132530   CK660053   CK661417   CO181317   CO276747   CO293052   CO302725   CO309873   CO310740   CO316403   CO322889   EC064573   EC075153   EC202111   EC203998   EC223422   EC243570   EC246427   GH941988   GH944985   GH947510   GH948072   GH948883   GH952247   GH959051   GH965009   GH966104   GH966210   GH973101   GH981266
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 11 -- 12   anterior midgut primordium   (Fisher et al., 2012) posterior midgut primordium   (Fisher et al., 2012) salivary gland body primordium   (Fisher et al., 2012) Comment:reported as salivary gland primordium embryonic stage 13 -- 16   dorsal pharyngeal muscle   (Fisher et al., 2012) embryonic foregut   (Fisher et al., 2012) embryonic hindgut   (Fisher et al., 2012) embryonic proventriculus   (Fisher et al., 2012) embryonic/larval midgut   (Fisher et al., 2012) embryonic/larval salivary gland   (Fisher et al., 2012) embryonic/larval somatic muscle   (Fisher et al., 2012) organism | ubiquitous   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, adult fat body, larval/adult salivary gland, larval trachea, adult spermathecae, adult male accessory gland, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult midgut, larval fat body, adult ovary, adult testis. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    864.05 Larval Midgut    784.8 Larval Hindgut    1239.5 Larval Malpighian Tubules    902.1 Larval Fat Body    197.4 Larval Salivary Gland    1342 Larval Trachea    1458.15 Larval Carcass    1293.15 Adult Head    1040.6 Adult Eye    1877.025 Adult Brain    1483.4 Adult Thoracic-Abdominal Ganglion    2010.2 Adult Crop    1088.8 Adult Midgut    342.5 Adult Hindgut    1147 Adult Malpighian Tubules    569.8 Adult Fat Body    1443.1 Adult Salivary Gland    1497.3 Adult Heart    1747.1 Adult VirginFemale Spermatheca    659.7 Adult InseminatedFemale Spermatheca    713.4 Adult Ovary    341.2 Adult Testis    245.4 Adult Male Accessory Gland    984.4 Adult Carcass    1611.3 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  (864.05) Larval Midgut  (784.8) Larval Hindgut  (1239.5) Larval Malpighian Tubules  (902.1) Larval Fat Body    197.4 Larval Salivary Gland  (1342) Larval Trachea  (1458.15) Larval Carcass  (1293.15) Adult Head  (1040.6) Adult Eye  (1877.025) Adult Brain  (1483.4) Adult Thoracic-Abdominal Ganglion  (2010.2) Adult Crop  (1088.8) Adult Midgut    342.5 Adult Hindgut  (1147) Adult Malpighian Tubules  (569.8) Adult Fat Body  (1443.1) Adult Salivary Gland  (1497.3) Adult Heart  (1747.1) Adult VirginFemale Spermatheca  (659.7) Adult InseminatedFemale Spermatheca  (713.4) Adult Ovary    341.2 Adult Testis    245.4 Adult Male Accessory Gland  (984.4) Adult Carcass  (1611.3) Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    864.05 Larval Midgut    784.8 Larval Hindgut  (1239.5) Larval Malpighian Tubules    902.1 Larval Fat Body    197.4 Larval Salivary Gland  (1342) Larval Trachea  (1458.15) Larval Carcass  (1293.15) Adult Head  1040.6 Adult Eye  (1877.025) Adult Brain  (1483.4) Adult Thoracic-Abdominal Ganglion  (2010.2) Adult Crop  (1088.8) Adult Midgut    342.5 Adult Hindgut  (1147) Adult Malpighian Tubules    569.8 Adult Fat Body  (1443.1) Adult Salivary Gland  (1497.3) Adult Heart  (1747.1) Adult VirginFemale Spermatheca    659.7 Adult InseminatedFemale Spermatheca    713.4 Adult Ovary    341.2 Adult Testis    245.4 Adult Male Accessory Gland    984.4 Adult Carcass  (1611.3) Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    864.05 Larval Midgut    784.8 Larval Hindgut    1239.5 Larval Malpighian Tubules    902.1 Larval Fat Body    197.4 Larval Salivary Gland    1342 Larval Trachea    1458.15 Larval Carcass    1293.15 Adult Head    1040.6 Adult Eye    1877.025 Adult Brain    1483.4 Adult Thoracic-Abdominal Ganglion    2010.2 Adult Crop    1088.8 Adult Midgut    342.5 Adult Hindgut    1147 Adult Malpighian Tubules    569.8 Adult Fat Body    1443.1 Adult Salivary Gland    1497.3 Adult Heart    1747.1 Adult VirginFemale Spermatheca    659.7 Adult InseminatedFemale Spermatheca    713.4 Adult Ovary    341.2 Adult Testis    245.4 Adult Male Accessory Gland    984.4 Adult Carcass    1611.3 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    864.05 Larval Midgut    784.8 Larval Hindgut    1239.5 Larval Malpighian Tubules    902.1 Larval Fat Body    197.4 Larval Salivary Gland    1342 Larval Trachea    1458.15 Larval Carcass    1293.15 Adult Head    1040.6 Adult Eye    1877.025 Adult Brain    1483.4 Adult Thoracic-Abdominal Ganglion    2010.2 Adult Crop    1088.8 Adult Midgut    342.5 Adult Hindgut    1147 Adult Malpighian Tubules    569.8 Adult Fat Body    1443.1 Adult Salivary Gland    1497.3 Adult Heart    1747.1 Adult VirginFemale Spermatheca    659.7 Adult InseminatedFemale Spermatheca    713.4 Adult Ovary    341.2 Adult Testis    245.4 Adult Male Accessory Gland    984.4 Adult Carcass    1611.3 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  (864.05) Larval Midgut  784.8 Larval Hindgut  (1239.5) Larval Malpighian Tubules  (902.1) Larval Fat Body    197.4 Larval Salivary Gland  (1342) Larval Trachea  (1458.15) Larval Carcass  (1293.15) Adult Head  (1040.6) Adult Eye  (1877.025) Adult Brain  (1483.4) Adult Thoracic-Abdominal Ganglion  (2010.2) Adult Crop  (1088.8) Adult Midgut    342.5 Adult Hindgut  (1147) Adult Malpighian Tubules  569.8 Adult Fat Body  (1443.1) Adult Salivary Gland  (1497.3) Adult Heart  (1747.1) Adult VirginFemale Spermatheca  659.7 Adult InseminatedFemale Spermatheca  713.4 Adult Ovary    341.2 Adult Testis    245.4 Adult Male Accessory Gland  (984.4) Adult Carcass  (1611.3) Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    864.05 Larval Midgut    784.8 Larval Hindgut  1239.5 Larval Malpighian Tubules    902.1 Larval Fat Body    197.4 Larval Salivary Gland  1342 Larval Trachea  1458.15 Larval Carcass  1293.15 Adult Head  1040.6 Adult Eye  (1877.025) Adult Brain  1483.4 Adult Thoracic-Abdominal Ganglion  (2010.2) Adult Crop  1088.8 Adult Midgut    342.5 Adult Hindgut  1147 Adult Malpighian Tubules    569.8 Adult Fat Body  1443.1 Adult Salivary Gland  1497.3 Adult Heart  (1747.1) Adult VirginFemale Spermatheca    659.7 Adult InseminatedFemale Spermatheca    713.4 Adult Ovary    341.2 Adult Testis    245.4 Adult Male Accessory Gland    984.4 Adult Carcass  1611.3 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    864.05 Larval Midgut    784.8 Larval Hindgut    1239.5 Larval Malpighian Tubules    902.1 Larval Fat Body    197.4 Larval Salivary Gland    1342 Larval Trachea    1458.15 Larval Carcass    1293.15 Adult Head    1040.6 Adult Eye    1877.025 Adult Brain    1483.4 Adult Thoracic-Abdominal Ganglion    2010.2 Adult Crop    1088.8 Adult Midgut    342.5 Adult Hindgut    1147 Adult Malpighian Tubules    569.8 Adult Fat Body    1443.1 Adult Salivary Gland    1497.3 Adult Heart    1747.1 Adult VirginFemale Spermatheca    659.7 Adult InseminatedFemale Spermatheca    713.4 Adult Ovary    341.2 Adult Testis    245.4 Adult Male Accessory Gland    984.4 Adult Carcass    1611.3 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    1040.6   NA  Eye    1877.025   NA  Brain    1483.4   864.05  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    2010.2   NA  Crop    1088.8   784.8  Midgut    342.5   1239.5  Hindgut    1147   902.1  Malpighian Tubules    569.8   197.4  Fat Body    1443.1   1342  Salivary Gland    1497.3   NA  Heart    1747.1   1458.15  Trachea    NA   NA  VirginFemale Spermatheca    659.7   NA  InseminatedFemale Spermatheca    713.4   NA  Ovary    341.2   NA  Testis    245.4   NA  Male Accessory Gland    984.4   1293.15  Carcass    1611.3 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    72 central nervous system, larvae L3    71 central nervous system, pupae P8    81 head, virgin 1-day female    79 head, virgin 4-day female    45 head, virgin 20-day female    51 head, mated 1-day female    49 head, mated 4-day female    45 head, mated 20-day female    43 head, mated 1-day male    86 head, mated 4-day male    78 head, mated 20-day male    100 salivary gland, larvae L3 wandering    35 salivary gland, white prepupae    84 digestive system, larvae L3 wandering    86 digestive system, 1-day adult    39 digestive system, 4-day adult    26 digestive system, 20-day adult    28 fat body, larvae L3 wandering    5 fat body, white prepupae    34 fat body, pupae P8    69 carcass, larvae L3 wandering    143 carcass, 1-day adult    62 carcass, 4-day adult    57 carcass, 20-day adult    63 ovary, virgin 4-day female    22 ovary, mated 4-day female    18 testis, mated 4-day male    54 accessory gland, mated 4-day male    38 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (72) central nervous system, larvae L3  (71) central nervous system, pupae P8  (81) head, virgin 1-day female  (79) head, virgin 4-day female  (45) head, virgin 20-day female  (51) head, mated 1-day female  (49) head, mated 4-day female  (45) head, mated 20-day female  (43) head, mated 1-day male  (86) head, mated 4-day male  (78) head, mated 20-day male  (100) salivary gland, larvae L3 wandering  (35) salivary gland, white prepupae  (84) digestive system, larvae L3 wandering  (86) digestive system, 1-day adult  (39) digestive system, 4-day adult  26 digestive system, 20-day adult  (28) fat body, larvae L3 wandering    5 fat body, white prepupae  (34) fat body, pupae P8  (69) carcass, larvae L3 wandering  (143) carcass, 1-day adult  (62) carcass, 4-day adult  (57) carcass, 20-day adult  (63) ovary, virgin 4-day female    22 ovary, mated 4-day female    18 testis, mated 4-day male  (54) accessory gland, mated 4-day male  (38) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    72 central nervous system, larvae L3    71 central nervous system, pupae P8    81 head, virgin 1-day female    79 head, virgin 4-day female    45 head, virgin 20-day female    51 head, mated 1-day female    49 head, mated 4-day female    45 head, mated 20-day female    43 head, mated 1-day male    86 head, mated 4-day male    78 head, mated 20-day male    100 salivary gland, larvae L3 wandering    35 salivary gland, white prepupae    84 digestive system, larvae L3 wandering    86 digestive system, 1-day adult    39 digestive system, 4-day adult    26 digestive system, 20-day adult    28 fat body, larvae L3 wandering    5 fat body, white prepupae    34 fat body, pupae P8    69 carcass, larvae L3 wandering  (143) carcass, 1-day adult    62 carcass, 4-day adult    57 carcass, 20-day adult    63 ovary, virgin 4-day female    22 ovary, mated 4-day female    18 testis, mated 4-day male    54 accessory gland, mated 4-day male    38 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    72 central nervous system, larvae L3    71 central nervous system, pupae P8    81 head, virgin 1-day female    79 head, virgin 4-day female    45 head, virgin 20-day female    51 head, mated 1-day female    49 head, mated 4-day female    45 head, mated 20-day female    43 head, mated 1-day male    86 head, mated 4-day male    78 head, mated 20-day male    100 salivary gland, larvae L3 wandering    35 salivary gland, white prepupae    84 digestive system, larvae L3 wandering    86 digestive system, 1-day adult    39 digestive system, 4-day adult    26 digestive system, 20-day adult    28 fat body, larvae L3 wandering    5 fat body, white prepupae    34 fat body, pupae P8    69 carcass, larvae L3 wandering    143 carcass, 1-day adult    62 carcass, 4-day adult    57 carcass, 20-day adult    63 ovary, virgin 4-day female    22 ovary, mated 4-day female    18 testis, mated 4-day male    54 accessory gland, mated 4-day male    38 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    72 central nervous system, larvae L3    71 central nervous system, pupae P8    81 head, virgin 1-day female    79 head, virgin 4-day female    45 head, virgin 20-day female    51 head, mated 1-day female    49 head, mated 4-day female    45 head, mated 20-day female    43 head, mated 1-day male    86 head, mated 4-day male    78 head, mated 20-day male    100 salivary gland, larvae L3 wandering    35 salivary gland, white prepupae    84 digestive system, larvae L3 wandering    86 digestive system, 1-day adult    39 digestive system, 4-day adult    26 digestive system, 20-day adult    28 fat body, larvae L3 wandering    5 fat body, white prepupae    34 fat body, pupae P8    69 carcass, larvae L3 wandering    143 carcass, 1-day adult    62 carcass, 4-day adult    57 carcass, 20-day adult    63 ovary, virgin 4-day female    22 ovary, mated 4-day female    18 testis, mated 4-day male    54 accessory gland, mated 4-day male    38 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (72) central nervous system, larvae L3  (71) central nervous system, pupae P8  (81) head, virgin 1-day female  (79) head, virgin 4-day female  (45) head, virgin 20-day female  (51) head, mated 1-day female  (49) head, mated 4-day female  (45) head, mated 20-day female  (43) head, mated 1-day male  (86) head, mated 4-day male  (78) head, mated 20-day male  (100) salivary gland, larvae L3 wandering  (35) salivary gland, white prepupae  (84) digestive system, larvae L3 wandering  (86) digestive system, 1-day adult  (39) digestive system, 4-day adult  26 digestive system, 20-day adult  28 fat body, larvae L3 wandering    5 fat body, white prepupae  (34) fat body, pupae P8  (69) carcass, larvae L3 wandering  (143) carcass, 1-day adult  (62) carcass, 4-day adult  (57) carcass, 20-day adult  (63) ovary, virgin 4-day female    22 ovary, mated 4-day female    18 testis, mated 4-day male  (54) accessory gland, mated 4-day male  (38) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    72 central nervous system, larvae L3    71 central nervous system, pupae P8    81 head, virgin 1-day female    79 head, virgin 4-day female    45 head, virgin 20-day female    51 head, mated 1-day female    49 head, mated 4-day female    45 head, mated 20-day female    43 head, mated 1-day male    86 head, mated 4-day male    78 head, mated 20-day male    100 salivary gland, larvae L3 wandering    35 salivary gland, white prepupae    84 digestive system, larvae L3 wandering    86 digestive system, 1-day adult    39 digestive system, 4-day adult    26 digestive system, 20-day adult    28 fat body, larvae L3 wandering    5 fat body, white prepupae    34 fat body, pupae P8    69 carcass, larvae L3 wandering  143 carcass, 1-day adult    62 carcass, 4-day adult    57 carcass, 20-day adult    63 ovary, virgin 4-day female    22 ovary, mated 4-day female    18 testis, mated 4-day male    54 accessory gland, mated 4-day male    38 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    72 central nervous system, larvae L3    71 central nervous system, pupae P8    81 head, virgin 1-day female    79 head, virgin 4-day female    45 head, virgin 20-day female    51 head, mated 1-day female    49 head, mated 4-day female    45 head, mated 20-day female    43 head, mated 1-day male    86 head, mated 4-day male    78 head, mated 20-day male    100 salivary gland, larvae L3 wandering    35 salivary gland, white prepupae    84 digestive system, larvae L3 wandering    86 digestive system, 1-day adult    39 digestive system, 4-day adult    26 digestive system, 20-day adult    28 fat body, larvae L3 wandering    5 fat body, white prepupae    34 fat body, pupae P8    69 carcass, larvae L3 wandering    143 carcass, 1-day adult    62 carcass, 4-day adult    57 carcass, 20-day adult    63 ovary, virgin 4-day female    22 ovary, mated 4-day female    18 testis, mated 4-day male    54 accessory gland, mated 4-day male    38 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of low expression. Peak expression observed during late larval stages, during early pupal stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    14 embryo 02-04hr    5 embryo 04-06hr    10 embryo 06-08hr    26 embryo 08-10hr    49 embryo 10-12hr    87 embryo 12-14hr    99 embryo 14-16hr    59 embryo 16-18hr    60 embryo 18-20hr    48 embryo 20-22hr    36 embryo 22-24hr    55 larva L1    44 larva L2    70 larva L3 12hr old    65 larva L3 puffstage 1-2    59 larva L3 puffstage 3-6    130 larva L3 puffstage 7-9    251 white prepupae new    242 white prepupae 12hr    145 white prepupae 24hr    174 pupae 2d postWPP    124 pupae 3d postWPP    105 pupae 4d postWPP    100 adult male 01day    124 adult male 05day    92 adult male 30day    76 adult female 01day    65 adult female 05day    46 adult female 30day    38 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    14 embryo 02-04hr    5 embryo 04-06hr    10 embryo 06-08hr  26 embryo 08-10hr  (49) embryo 10-12hr  (87) embryo 12-14hr  (99) embryo 14-16hr  (59) embryo 16-18hr  (60) embryo 18-20hr  (48) embryo 20-22hr  (36) embryo 22-24hr  (55) larva L1  (44) larva L2  (70) larva L3 12hr old  (65) larva L3 puffstage 1-2  (59) larva L3 puffstage 3-6  (130) larva L3 puffstage 7-9  (251) white prepupae new  (242) white prepupae 12hr  (145) white prepupae 24hr  (174) pupae 2d postWPP  (124) pupae 3d postWPP  (105) pupae 4d postWPP  (100) adult male 01day  (124) adult male 05day  (92) adult male 30day  (76) adult female 01day  (65) adult female 05day  (46) adult female 30day  (38) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    14 embryo 02-04hr    5 embryo 04-06hr    10 embryo 06-08hr    26 embryo 08-10hr    49 embryo 10-12hr    87 embryo 12-14hr    99 embryo 14-16hr    59 embryo 16-18hr    60 embryo 18-20hr    48 embryo 20-22hr    36 embryo 22-24hr    55 larva L1    44 larva L2    70 larva L3 12hr old    65 larva L3 puffstage 1-2    59 larva L3 puffstage 3-6  (130) larva L3 puffstage 7-9  (251) white prepupae new  (242) white prepupae 12hr  (145) white prepupae 24hr  (174) pupae 2d postWPP  (124) pupae 3d postWPP  105 pupae 4d postWPP    100 adult male 01day  (124) adult male 05day    92 adult male 30day    76 adult female 01day    65 adult female 05day    46 adult female 30day    38 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    14 embryo 02-04hr    5 embryo 04-06hr    10 embryo 06-08hr    26 embryo 08-10hr    49 embryo 10-12hr    87 embryo 12-14hr    99 embryo 14-16hr    59 embryo 16-18hr    60 embryo 18-20hr    48 embryo 20-22hr    36 embryo 22-24hr    55 larva L1    44 larva L2    70 larva L3 12hr old    65 larva L3 puffstage 1-2    59 larva L3 puffstage 3-6    130 larva L3 puffstage 7-9    251 white prepupae new    242 white prepupae 12hr    145 white prepupae 24hr    174 pupae 2d postWPP    124 pupae 3d postWPP    105 pupae 4d postWPP    100 adult male 01day    124 adult male 05day    92 adult male 30day    76 adult female 01day    65 adult female 05day    46 adult female 30day    38 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    14 embryo 02-04hr    5 embryo 04-06hr    10 embryo 06-08hr    26 embryo 08-10hr    49 embryo 10-12hr    87 embryo 12-14hr    99 embryo 14-16hr    59 embryo 16-18hr    60 embryo 18-20hr    48 embryo 20-22hr    36 embryo 22-24hr    55 larva L1    44 larva L2    70 larva L3 12hr old    65 larva L3 puffstage 1-2    59 larva L3 puffstage 3-6    130 larva L3 puffstage 7-9    251 white prepupae new    242 white prepupae 12hr    145 white prepupae 24hr    174 pupae 2d postWPP    124 pupae 3d postWPP    105 pupae 4d postWPP    100 adult male 01day    124 adult male 05day    92 adult male 30day    76 adult female 01day    65 adult female 05day    46 adult female 30day    38 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    14 embryo 02-04hr    5 embryo 04-06hr    10 embryo 06-08hr  26 embryo 08-10hr  (49) embryo 10-12hr  (87) embryo 12-14hr  (99) embryo 14-16hr  (59) embryo 16-18hr  (60) embryo 18-20hr  (48) embryo 20-22hr  (36) embryo 22-24hr  (55) larva L1  (44) larva L2  (70) larva L3 12hr old  (65) larva L3 puffstage 1-2  (59) larva L3 puffstage 3-6  (130) larva L3 puffstage 7-9  (251) white prepupae new  (242) white prepupae 12hr  (145) white prepupae 24hr  (174) pupae 2d postWPP  (124) pupae 3d postWPP  (105) pupae 4d postWPP  (100) adult male 01day  (124) adult male 05day  (92) adult male 30day  (76) adult female 01day  (65) adult female 05day  (46) adult female 30day  (38) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    14 embryo 02-04hr    5 embryo 04-06hr    10 embryo 06-08hr    26 embryo 08-10hr    49 embryo 10-12hr    87 embryo 12-14hr    99 embryo 14-16hr    59 embryo 16-18hr    60 embryo 18-20hr    48 embryo 20-22hr    36 embryo 22-24hr    55 larva L1    44 larva L2    70 larva L3 12hr old    65 larva L3 puffstage 1-2    59 larva L3 puffstage 3-6  130 larva L3 puffstage 7-9  (251) white prepupae new  (242) white prepupae 12hr  (145) white prepupae 24hr  (174) pupae 2d postWPP  124 pupae 3d postWPP  105 pupae 4d postWPP    100 adult male 01day  124 adult male 05day    92 adult male 30day    76 adult female 01day    65 adult female 05day    46 adult female 30day    38 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    14 embryo 02-04hr    5 embryo 04-06hr    10 embryo 06-08hr    26 embryo 08-10hr    49 embryo 10-12hr    87 embryo 12-14hr    99 embryo 14-16hr    59 embryo 16-18hr    60 embryo 18-20hr    48 embryo 20-22hr    36 embryo 22-24hr    55 larva L1    44 larva L2    70 larva L3 12hr old    65 larva L3 puffstage 1-2    59 larva L3 puffstage 3-6    130 larva L3 puffstage 7-9    251 white prepupae new    242 white prepupae 12hr    145 white prepupae 24hr    174 pupae 2d postWPP    124 pupae 3d postWPP    105 pupae 4d postWPP    100 adult male 01day    124 adult male 05day    92 adult male 30day    76 adult female 01day    65 adult female 05day    46 adult female 30day    38 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    170 Schneider line 2 Sg4    119 embryonic 1182-4H    62 embryonic GM2    204 embryonic Kc167    133 embryonic S1    133 embryonic S3    62 leg disc CME L1    53 wing disc CME-W2    58 wing disc ML-DmD8    137 wing disc ML-DmD9    86 wing disc ML-DmD16-c3    35 wing disc ML-DmD21    108 wing disc ML-DmD32    57 haltere disc ML-DmD17-c3    144 eye-antennal disc ML-DmD11    157 antennal disc ML-DmD20-c5    54 mixed discs ML-DmD4-c1    65 CNS ML-DmBG1-c1    65 CNS ML-DmBG2-c2    344 tumorous blood cells mbn2    173 ovary fGS/OSS    40 ovary OSC    53 ovary OSS    16 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (170) Schneider line 2 Sg4  (119) embryonic 1182-4H  (62) embryonic GM2  (204) embryonic Kc167  (133) embryonic S1  (133) embryonic S3  (62) leg disc CME L1  (53) wing disc CME-W2  (58) wing disc ML-DmD8  (137) wing disc ML-DmD9  (86) wing disc ML-DmD16-c3  (35) wing disc ML-DmD21  (108) wing disc ML-DmD32  (57) haltere disc ML-DmD17-c3  (144) eye-antennal disc ML-DmD11  (157) antennal disc ML-DmD20-c5  (54) mixed discs ML-DmD4-c1  (65) CNS ML-DmBG1-c1  (65) CNS ML-DmBG2-c2  (344) tumorous blood cells mbn2  (173) ovary fGS/OSS  (40) ovary OSC  (53) ovary OSS    16 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  (170) Schneider line 2 Sg4  (119) embryonic 1182-4H    62 embryonic GM2  (204) embryonic Kc167  (133) embryonic S1  (133) embryonic S3    62 leg disc CME L1    53 wing disc CME-W2    58 wing disc ML-DmD8  (137) wing disc ML-DmD9    86 wing disc ML-DmD16-c3    35 wing disc ML-DmD21  (108) wing disc ML-DmD32    57 haltere disc ML-DmD17-c3  (144) eye-antennal disc ML-DmD11  (157) antennal disc ML-DmD20-c5    54 mixed discs ML-DmD4-c1    65 CNS ML-DmBG1-c1    65 CNS ML-DmBG2-c2  (344) tumorous blood cells mbn2  (173) ovary fGS/OSS    40 ovary OSC    53 ovary OSS    16 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    170 Schneider line 2 Sg4    119 embryonic 1182-4H    62 embryonic GM2    204 embryonic Kc167    133 embryonic S1    133 embryonic S3    62 leg disc CME L1    53 wing disc CME-W2    58 wing disc ML-DmD8    137 wing disc ML-DmD9    86 wing disc ML-DmD16-c3    35 wing disc ML-DmD21    108 wing disc ML-DmD32    57 haltere disc ML-DmD17-c3    144 eye-antennal disc ML-DmD11    157 antennal disc ML-DmD20-c5    54 mixed discs ML-DmD4-c1    65 CNS ML-DmBG1-c1    65 CNS ML-DmBG2-c2    344 tumorous blood cells mbn2    173 ovary fGS/OSS    40 ovary OSC    53 ovary OSS    16 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    170 Schneider line 2 Sg4    119 embryonic 1182-4H    62 embryonic GM2    204 embryonic Kc167    133 embryonic S1    133 embryonic S3    62 leg disc CME L1    53 wing disc CME-W2    58 wing disc ML-DmD8    137 wing disc ML-DmD9    86 wing disc ML-DmD16-c3    35 wing disc ML-DmD21    108 wing disc ML-DmD32    57 haltere disc ML-DmD17-c3    144 eye-antennal disc ML-DmD11    157 antennal disc ML-DmD20-c5    54 mixed discs ML-DmD4-c1    65 CNS ML-DmBG1-c1    65 CNS ML-DmBG2-c2    344 tumorous blood cells mbn2    173 ovary fGS/OSS    40 ovary OSC    53 ovary OSS    16 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (170) Schneider line 2 Sg4  (119) embryonic 1182-4H  (62) embryonic GM2  (204) embryonic Kc167  (133) embryonic S1  (133) embryonic S3  (62) leg disc CME L1  (53) wing disc CME-W2  (58) wing disc ML-DmD8  (137) wing disc ML-DmD9  (86) wing disc ML-DmD16-c3  (35) wing disc ML-DmD21  (108) wing disc ML-DmD32  (57) haltere disc ML-DmD17-c3  (144) eye-antennal disc ML-DmD11  (157) antennal disc ML-DmD20-c5  (54) mixed discs ML-DmD4-c1  (65) CNS ML-DmBG1-c1  (65) CNS ML-DmBG2-c2  (344) tumorous blood cells mbn2  (173) ovary fGS/OSS  (40) ovary OSC  (53) ovary OSS    16 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  (170) Schneider line 2 Sg4  119 embryonic 1182-4H    62 embryonic GM2  (204) embryonic Kc167  133 embryonic S1  133 embryonic S3    62 leg disc CME L1    53 wing disc CME-W2    58 wing disc ML-DmD8  137 wing disc ML-DmD9    86 wing disc ML-DmD16-c3    35 wing disc ML-DmD21  108 wing disc ML-DmD32    57 haltere disc ML-DmD17-c3  (144) eye-antennal disc ML-DmD11  (157) antennal disc ML-DmD20-c5    54 mixed discs ML-DmD4-c1    65 CNS ML-DmBG1-c1    65 CNS ML-DmBG2-c2  (344) tumorous blood cells mbn2  (173) ovary fGS/OSS    40 ovary OSC    53 ovary OSS    16 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    170 Schneider line 2 Sg4    119 embryonic 1182-4H    62 embryonic GM2    204 embryonic Kc167    133 embryonic S1    133 embryonic S3    62 leg disc CME L1    53 wing disc CME-W2    58 wing disc ML-DmD8    137 wing disc ML-DmD9    86 wing disc ML-DmD16-c3    35 wing disc ML-DmD21    108 wing disc ML-DmD32    57 haltere disc ML-DmD17-c3    144 eye-antennal disc ML-DmD11    157 antennal disc ML-DmD20-c5    54 mixed discs ML-DmD4-c1    65 CNS ML-DmBG1-c1    65 CNS ML-DmBG2-c2    344 tumorous blood cells mbn2    173 ovary fGS/OSS    40 ovary OSC    53 ovary OSS    16 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    23 cold shock, 4-day adult    21 heat shock, 4-day adult    34 Cadmium 50 mM 6 hrs, larvae L3    45 Cadmium 50 mM 12 hrs, larvae L3    91 Cadmium 50 mM 48 hrs, 4-day adult    37 Cadmium 100 mM 48 hrs, 4-day adult    31 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    27 Zinc 5 mM 12 hrs, larvae L3    17 Zinc 4.5 mM 48 hrs, 4-day adult    29 Ethanol 2.5% 3 hrs, larvae L3    38 Ethanol 5% 3 hrs, larvae L3    48 Ethanol 10% 3 hrs, larvae L3    35 Caffeine 1.5 mg/ml 4 hrs, larvae L3    54 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    16 Paraquat 5 mM 48 hrs, 4-day adult    47 Paraquat 10 mM 48 hrs, 4-day adult    67 Rotenone 2 μg 12 hrs, larvae L3    61 Rotenone 8 μg 12 hrs, larvae L3    33 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    23 cold shock, 4-day adult    21 heat shock, 4-day adult  (34) Cadmium 50 mM 6 hrs, larvae L3  (45) Cadmium 50 mM 12 hrs, larvae L3  (91) Cadmium 50 mM 48 hrs, 4-day adult  (37) Cadmium 100 mM 48 hrs, 4-day adult  (31) Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult  (27) Zinc 5 mM 12 hrs, larvae L3    17 Zinc 4.5 mM 48 hrs, 4-day adult  (29) Ethanol 2.5% 3 hrs, larvae L3  (38) Ethanol 5% 3 hrs, larvae L3  (48) Ethanol 10% 3 hrs, larvae L3  (35) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (54) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (29) Caffeine 25 mg/ml 48 hrs, 4-day adult    16 Paraquat 5 mM 48 hrs, 4-day adult  (47) Paraquat 10 mM 48 hrs, 4-day adult  (67) Rotenone 2 μg 12 hrs, larvae L3  (61) Rotenone 8 μg 12 hrs, larvae L3  (33) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    23 cold shock, 4-day adult    21 heat shock, 4-day adult    34 Cadmium 50 mM 6 hrs, larvae L3    45 Cadmium 50 mM 12 hrs, larvae L3    91 Cadmium 50 mM 48 hrs, 4-day adult    37 Cadmium 100 mM 48 hrs, 4-day adult    31 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    27 Zinc 5 mM 12 hrs, larvae L3    17 Zinc 4.5 mM 48 hrs, 4-day adult    29 Ethanol 2.5% 3 hrs, larvae L3    38 Ethanol 5% 3 hrs, larvae L3    48 Ethanol 10% 3 hrs, larvae L3    35 Caffeine 1.5 mg/ml 4 hrs, larvae L3    54 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    16 Paraquat 5 mM 48 hrs, 4-day adult    47 Paraquat 10 mM 48 hrs, 4-day adult    67 Rotenone 2 μg 12 hrs, larvae L3    61 Rotenone 8 μg 12 hrs, larvae L3    33 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    23 cold shock, 4-day adult    21 heat shock, 4-day adult    34 Cadmium 50 mM 6 hrs, larvae L3    45 Cadmium 50 mM 12 hrs, larvae L3    91 Cadmium 50 mM 48 hrs, 4-day adult    37 Cadmium 100 mM 48 hrs, 4-day adult    31 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    27 Zinc 5 mM 12 hrs, larvae L3    17 Zinc 4.5 mM 48 hrs, 4-day adult    29 Ethanol 2.5% 3 hrs, larvae L3    38 Ethanol 5% 3 hrs, larvae L3    48 Ethanol 10% 3 hrs, larvae L3    35 Caffeine 1.5 mg/ml 4 hrs, larvae L3    54 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    16 Paraquat 5 mM 48 hrs, 4-day adult    47 Paraquat 10 mM 48 hrs, 4-day adult    67 Rotenone 2 μg 12 hrs, larvae L3    61 Rotenone 8 μg 12 hrs, larvae L3    33 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    23 cold shock, 4-day adult    21 heat shock, 4-day adult    34 Cadmium 50 mM 6 hrs, larvae L3    45 Cadmium 50 mM 12 hrs, larvae L3    91 Cadmium 50 mM 48 hrs, 4-day adult    37 Cadmium 100 mM 48 hrs, 4-day adult    31 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    27 Zinc 5 mM 12 hrs, larvae L3    17 Zinc 4.5 mM 48 hrs, 4-day adult    29 Ethanol 2.5% 3 hrs, larvae L3    38 Ethanol 5% 3 hrs, larvae L3    48 Ethanol 10% 3 hrs, larvae L3    35 Caffeine 1.5 mg/ml 4 hrs, larvae L3    54 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    16 Paraquat 5 mM 48 hrs, 4-day adult    47 Paraquat 10 mM 48 hrs, 4-day adult    67 Rotenone 2 μg 12 hrs, larvae L3    61 Rotenone 8 μg 12 hrs, larvae L3    33 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    23 cold shock, 4-day adult    21 heat shock, 4-day adult  (34) Cadmium 50 mM 6 hrs, larvae L3  (45) Cadmium 50 mM 12 hrs, larvae L3  (91) Cadmium 50 mM 48 hrs, 4-day adult  (37) Cadmium 100 mM 48 hrs, 4-day adult  31 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult  27 Zinc 5 mM 12 hrs, larvae L3    17 Zinc 4.5 mM 48 hrs, 4-day adult  29 Ethanol 2.5% 3 hrs, larvae L3  (38) Ethanol 5% 3 hrs, larvae L3  (48) Ethanol 10% 3 hrs, larvae L3  (35) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (54) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  29 Caffeine 25 mg/ml 48 hrs, 4-day adult    16 Paraquat 5 mM 48 hrs, 4-day adult  (47) Paraquat 10 mM 48 hrs, 4-day adult  (67) Rotenone 2 μg 12 hrs, larvae L3  (61) Rotenone 8 μg 12 hrs, larvae L3  (33) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    23 cold shock, 4-day adult    21 heat shock, 4-day adult    34 Cadmium 50 mM 6 hrs, larvae L3    45 Cadmium 50 mM 12 hrs, larvae L3    91 Cadmium 50 mM 48 hrs, 4-day adult    37 Cadmium 100 mM 48 hrs, 4-day adult    31 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    27 Zinc 5 mM 12 hrs, larvae L3    17 Zinc 4.5 mM 48 hrs, 4-day adult    29 Ethanol 2.5% 3 hrs, larvae L3    38 Ethanol 5% 3 hrs, larvae L3    48 Ethanol 10% 3 hrs, larvae L3    35 Caffeine 1.5 mg/ml 4 hrs, larvae L3    54 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    16 Paraquat 5 mM 48 hrs, 4-day adult    47 Paraquat 10 mM 48 hrs, 4-day adult    67 Rotenone 2 μg 12 hrs, larvae L3    61 Rotenone 8 μg 12 hrs, larvae L3    33 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    23 cold shock, 4-day adult    21 heat shock, 4-day adult    34 Cadmium 50 mM 6 hrs, larvae L3    45 Cadmium 50 mM 12 hrs, larvae L3    91 Cadmium 50 mM 48 hrs, 4-day adult    37 Cadmium 100 mM 48 hrs, 4-day adult    31 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    27 Zinc 5 mM 12 hrs, larvae L3    17 Zinc 4.5 mM 48 hrs, 4-day adult    29 Ethanol 2.5% 3 hrs, larvae L3    38 Ethanol 5% 3 hrs, larvae L3    48 Ethanol 10% 3 hrs, larvae L3    35 Caffeine 1.5 mg/ml 4 hrs, larvae L3    54 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    16 Paraquat 5 mM 48 hrs, 4-day adult    47 Paraquat 10 mM 48 hrs, 4-day adult    67 Rotenone 2 μg 12 hrs, larvae L3    61 Rotenone 8 μg 12 hrs, larvae L3    33 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_25 mE1_20_mRNA_expression_cluster_02
External Data & Images
Linkouts	BDGP expression data • HL02309 RE59362 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0042174 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG18854-RA;CG10293-RB FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CR18854 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Phenotype manifest in Allele
Classical Alleles ( 2 )
For All Classical Alleles Show
Allele of CR18854 Class Mutagen Stocks Known lesion CR18854EY00141 1 -- CR18854KG05849 1 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CR18854 Class Mutagen Stocks Known lesion CR18854GL00208 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CR18854HM04041 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(2L)Exel6025 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{TRiP.GL00208} NA P{TRiP.HM04041} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{SUPor-P}CR18854KG05849 NA insertion of mobile activating element P{EPgy2}CR18854EY00141 NA
Gene Ontology: Function, Process & Cellular Component ( 1 unique term )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function
CV term Evidence References
inositol-1,4,5-trisphosphate 3-kinase activity inferred from sequence or structural similarity with UniProtKB:P17105 (FlyBase, 1992-) non-traceable author statement (Gray, 2000.3.23)
Biological Process ( 0 terms)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	antisense_gene (FlyBase Genome Annotators, 2010) non_protein_coding_gene (FlyBase Genome Annotators, 2010) nuclear_gene   pseudogene_attribute (FlyBase Genome Annotators, 2012)
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
CR18854 - 128up anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - ATPsyn-γ anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Arf79F anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Arp2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Arpc2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Bap55 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - CG10306 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - CG10641 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - CG11107 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - CG11266 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - CG15220 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - CG15735 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - CG16789 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - CG17691 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - CG2021 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - CG3817 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - CG5642 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - CG7033 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - CG8258 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - CG8545 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Cct5 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Cctγ anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Cdc5 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Elongin-B anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Hsp23 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Hsp27 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - LRP1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - NHP2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - P32 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Patr-1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Pgam5 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Prosα2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Prosα7 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Prosβ3 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Prp3 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - R anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Rbp1-like anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - RpL35A anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - RpLP0 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - RpS19b anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Rpt6 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Rrp40 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Rrp46 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Saf-B anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Sec23 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - SmG anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Tango7 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Tapδ anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Tcp-1ζ anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Tcp-1η anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Tom20 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - Vha55 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - clu anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - coil anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - hyd anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - l(2)03709 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - mRpL39 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - mRpL43 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - mRpL44 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - mRpS24 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - mor anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - mtacp1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - mts anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - nonA-l anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - ref(2)P anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CR18854 - sds22 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CR18854 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 72836 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0042174 DroID - A comprehensive database of gene and protein interactions. • FBgn0042174
Orthologs
OrthoDB Orthologs (0) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search No orthologs identified Dipteran inclusive ortholog search No orthologs identified Insect inclusive ortholog search No orthologs identified Arthropod inclusive ortholog search No orthologs identified Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (None identified)
No orthologies identified
Orthologs in non-Drosophila Dipterans (None identified)
No non-Drosophilid orthologies identified
Orthologs in non-Dipteran Insects (None identified)
No non-Dipteran orthologies identified
Orthologs in non-Insect Arthropods (None identified)
No non-Insect Arthropod orthologies identified
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (0) based on analysis using Dmel annotation version 4.3
No orthologs identified
Stocks & Reagents
Stocks Listed in FlyBase ( 4 )
Bloomington	35304 y1 sc* v1; P{TRiP.GL00208}attP2 14810 y1 w67c23; P{EPgy2}CR18854EY00141 14127 y1 w67c23; P{SUPor-P}CR18854KG05849 31732 y1 v1; P{TRiP.HM04041}attP2/TM3, Sb1
Genomic Clones ( 2 )
	BACR02I05 BACR22H06 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 74 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GH14831 HL02309 LD34273 RE59362
Other clones	DPiM_GH14831 DPiM_RE59362
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT10494 GH02306 GH23576 GH24280 GM07857 HL01459 HL02175 HL02287 HL02307 HL02354 HL02734 HL03065 HL03429 HL03835 LD28240 LP01934 LP02128 LP10102 LP13151 LP14106 LP18283 LP20932 RE29232 RH07829 RH22484 RH25487 RH28543 RH34665 RH38255 RH38978 RH48059 RH49370 RH51219 RH67415 RH72941 SD14095 SD23050 SD23216 SD25467 SD27416
Other clones	807 61283 62013 72623 97349 99713 161095 EC14029 EK121952 EK184763 EK189138 EK201563 EK219638 EK222411 EK264851 LD23982 RP004015097 RP004147325 RP004192524 RP004201855 RP004208856 RP004232795 RP004233974 RP004260543 RP004387417 RP004483663 RP004483915 RP004496698
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0042174 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 10178800
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG18854 CG13122 (FlyBase, 1996-)
Additional comments	The CG18854 annotation can produce an approximately 400bp dsRNA through interaction of its 5' and 3' untranslated regions. These regions are represented in FlyBase by the "esi-1" gene. (Czech et al., 2008) Source for merge of CG18854 CG13122 was a shared cDNA (date:010720). (FlyBase, 1996-)
Other Comments
	Annotation CG18854 renamed CR18854 in release 5.24 of the genome annotation. (FlyBase Genome Annotators, 2010) The Hrp59 protein binds preferentially to a subset of mRNAs, including CG18854 mRNA. (Kiesler et al., 2005)
External Crossreferences & Linkouts
Sequence Crossreferences
	DDBJ / EMBL / GenBank • AA820395 AA979599 AAN10708 AAN71180 AAN71255 AAX33402 AF248501 AF248502 AI238729 AI455412 BI372410 BT001425 BT001500 BT021254 Entrez Gene - A searchable database of RefSeq genes. • 10178800 UniProtKB/TrEMBL • Q5BIH0 Q8I0D1 Q8IH06
Other Crossreferences
	BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • HL02309 RE59362
Linkouts
	BioGRID - A database of protein and genetic interactions • 72836 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0042174 DroID - A comprehensive database of gene and protein interactions. • FBgn0042174 DRSC - Results from RNAi screens. • FBgn0042174 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0042174 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG18854-RA;CG10293-RB FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0042174 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 10178800 modMine - Data generated by the modENCODE project. • FBgn0042174
Synonyms & Secondary IDs ( 4 )
Reported As
Symbol Synonym	CG13122 (Egger et al., 2002, Tricoire, 2001.3.6, Lundgren et al., 2005) CG18854 (Czech et al., 2008, Kiesler et al., 2005, Okamura et al., 2008, Zeitlinger et al., 2007, Okamura et al., 2008, Firth and Baker, 2007, Zhan et al., 2011, Marques et al., 2010, Burgler and Macdonald, 2005, Cunha et al., 2010) CR18854 (FlyBase Genome Annotators, 2010, Ni et al., 2008, Ni et al., 2011.7.19, FlyBase Genome Annotators, 2012)
Name Synonym	1D-myo-Inositol-trisphosphate-3-kinase (Lundgren et al., 2005)
Secondary FlyBase IDs
	FBgn0032148
References ( 30 )
Generate a list of	All references relating to this gene ( 30 )
List References by type	Research paper  ( 13 ) Supplementary material  ( 4 ) Personal communication to FlyBase  ( 6 ) FlyBase analysis  ( 5 ) DNA/RNA sequence record  ( 1 ) Website  ( 1 )
Recent research papers ( 1 )
	Zhan et al., 2011, Gene 470(1-2): 1--6 Evolution of alternative splicing in newly evolved genes of Drosophila. [FBrf0212278] Show all research papers ...