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Gene Dmel\Chrac-14

General Information
Symbol	Dmel\Chrac-14	Species	D. melanogaster
Name	Chrac-14	Annotation symbol	CG13399
Feature type	protein_coding_gene	FlyBase ID	FBgn0043002
Gene Model Status	Current	Stock availability	3 publicly available
Also Known As	CHRAC14, CHRAC, CHRAC-14
Genomic Location
Chromosome (arm)	2L	Recombination map
Cytogenetic map	29C4-29C5	Sequence location	2L:8,437,411..8,442,352 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Chrac-14 is referred to in FlyBase by the symbol Dmel\Chrac-14 (CG13399, FBgn0043002). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: protein binding; protein heterodimerization activity. There is experimental evidence that it is involved in the biological process: response to DNA damage stimulus; nucleosome mobilization. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Histone-fold; Transcription factor CBF/NF-Y/archaeal histone. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages. This gene is annotated by FlyBase as a dicistronic gene, meaning that some or all of its transcripts encode two or more polypeptide-coding open reading frames (ORFs) , with each ORF assigned to a different gene. The distribution of RNA-Seq coverage data amongst the different encoded genes cannot be determined. Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression at high levels in the following post-embryonic organs or tissues: adult ovary. Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system, larval trachea. Gene sequence location is 2L:8437411..8442352.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10	Clones RP001033106
FB2012_01	Sequence features BKN24415 HFA16894
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 29C4-29C5   Limits computationally determined from genome sequence between P{lacW}l(2)k03706k03706&P{lacW}Acerk07704 and P{PZ}lmg03424
Experimentally Determined Cytological Location
Cytogenetic map Notes References 29A-29A   (determined by in situ hybridisation)   (Louis et al., 1997)
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Chrac-14 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	gene_with_dicistronic_mRNA ; SO:0000722
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Chrac-14-RA FBtr0100267  NM_057299   4718   128 Chrac-14-RB FBtr0100268  NM_057298   588   128
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Chrac-14-PA   FBpp0099655   13.8   128   5.81     NP_476647   AAF52677 Chrac-14-PB   FBpp0099657   13.8   128   5.81     NP_476646   AAO41168
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Transcription factor CBF/NF-Y/archaeal histone (IPR003958) Histone-fold (IPR009072)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA695912   AE014134 AAF52677   AE014134 AAO41168   AI237921   AJ271141 CAB70602   AY070970 AAL48592   AY231819   BH614957   BI166720   BI166792   BI577179   BP547749   CO282141   CO338349   CO339663   EC073516   EC256760   EC261654   EL874896   EV588119   FE863482   FE863555   FE863556   FE863609   FE863803   FE863804   FE863940   FE863941   FE863977   FE863987   GH738783   GH739740   GH741189   GH741351   GH741503   GH741534   GH742235   GH742284   GH743564   GH743834   GH744814   GH744849   GH746419   GH761739   GH763342   GH764415   GH764632   GH764906   GH765119   GH765569   GH766176   GH767369   GH768180   GH942676   GH943333   GH945725   GH946107   GH947378   GH947379   GH947558   GH947932   GH949575   GH949816   GH949878   GH950009   GH950990   GH951465   GH954414   GH957110   GH958326   GH960045   GH961449   GH961591   GH967904   GH969052   GH970169   GH971075   GH972072   GH972200   GH972268   GH972543   GH972845   GH973948   GH978636   GH979086   GH979445   GH981620   GH982142   GH982727   GH984068   GH984898
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9V444
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0043002    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0043002 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages. This gene is annotated by FlyBase as a dicistronic gene, meaning that some or all of its transcripts encode two or more polypeptide-coding open reading frames (ORFs) , with each ORF assigned to a different gene. The distribution of RNA-Seq coverage data amongst the different encoded genes cannot be determined. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0043002 expression level Developmental Stage   Expression Level embryo 00-02hr    1926 embryo 02-04hr    1957 embryo 04-06hr    1799 embryo 06-08hr    1037 embryo 08-10hr    893 embryo 10-12hr    546 embryo 12-14hr    551 embryo 14-16hr    443 embryo 16-18hr    376 embryo 18-20hr    216 embryo 20-22hr    431 embryo 22-24hr    444 larva L1    272 larva L2    276 larva L3 12hr old    193 larva L3 puffstage 1-2    268 larva L3 puffstage 3-6    373 larva L3 puffstage 7-9    428 white prepupae new    433 white prepupae 12hr    487 white prepupae 24hr    505 pupae 2d postWPP    340 pupae 3d postWPP    218 pupae 4d postWPP    157 adult male 01day    281 adult male 05day    354 adult male 30day    300 adult female 01day    518 adult female 05day    1196 adult female 30day    1113 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1926) embryo 02-04hr  (1957) embryo 04-06hr  (1799) embryo 06-08hr  (1037) embryo 08-10hr  (893) embryo 10-12hr  (546) embryo 12-14hr  (551) embryo 14-16hr  (443) embryo 16-18hr  (376) embryo 18-20hr  (216) embryo 20-22hr  (431) embryo 22-24hr  (444) larva L1  (272) larva L2  (276) larva L3 12hr old  (193) larva L3 puffstage 1-2  (268) larva L3 puffstage 3-6  (373) larva L3 puffstage 7-9  (428) white prepupae new  (433) white prepupae 12hr  (487) white prepupae 24hr  (505) pupae 2d postWPP  (340) pupae 3d postWPP  (218) pupae 4d postWPP  (157) adult male 01day  (281) adult male 05day  (354) adult male 30day  (300) adult female 01day  (518) adult female 05day  (1196) adult female 30day  (1113) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (1926) embryo 02-04hr  (1957) embryo 04-06hr  (1799) embryo 06-08hr    1037 embryo 08-10hr    893 embryo 10-12hr    546 embryo 12-14hr    551 embryo 14-16hr    443 embryo 16-18hr    376 embryo 18-20hr    216 embryo 20-22hr    431 embryo 22-24hr    444 larva L1    272 larva L2    276 larva L3 12hr old    193 larva L3 puffstage 1-2    268 larva L3 puffstage 3-6    373 larva L3 puffstage 7-9    428 white prepupae new    433 white prepupae 12hr    487 white prepupae 24hr    505 pupae 2d postWPP    340 pupae 3d postWPP    218 pupae 4d postWPP    157 adult male 01day    281 adult male 05day    354 adult male 30day    300 adult female 01day    518 adult female 05day    1196 adult female 30day    1113 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1926 embryo 02-04hr    1957 embryo 04-06hr    1799 embryo 06-08hr    1037 embryo 08-10hr    893 embryo 10-12hr    546 embryo 12-14hr    551 embryo 14-16hr    443 embryo 16-18hr    376 embryo 18-20hr    216 embryo 20-22hr    431 embryo 22-24hr    444 larva L1    272 larva L2    276 larva L3 12hr old    193 larva L3 puffstage 1-2    268 larva L3 puffstage 3-6    373 larva L3 puffstage 7-9    428 white prepupae new    433 white prepupae 12hr    487 white prepupae 24hr    505 pupae 2d postWPP    340 pupae 3d postWPP    218 pupae 4d postWPP    157 adult male 01day    281 adult male 05day    354 adult male 30day    300 adult female 01day    518 adult female 05day    1196 adult female 30day    1113 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1926 embryo 02-04hr    1957 embryo 04-06hr    1799 embryo 06-08hr    1037 embryo 08-10hr    893 embryo 10-12hr    546 embryo 12-14hr    551 embryo 14-16hr    443 embryo 16-18hr    376 embryo 18-20hr    216 embryo 20-22hr    431 embryo 22-24hr    444 larva L1    272 larva L2    276 larva L3 12hr old    193 larva L3 puffstage 1-2    268 larva L3 puffstage 3-6    373 larva L3 puffstage 7-9    428 white prepupae new    433 white prepupae 12hr    487 white prepupae 24hr    505 pupae 2d postWPP    340 pupae 3d postWPP    218 pupae 4d postWPP    157 adult male 01day    281 adult male 05day    354 adult male 30day    300 adult female 01day    518 adult female 05day    1196 adult female 30day    1113 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0043002 expression level Developmental Stage   Expression Level embryo 00-02hr    1926 embryo 02-04hr    1957 embryo 04-06hr    1799 embryo 06-08hr    1037 embryo 08-10hr    893 embryo 10-12hr    546 embryo 12-14hr    551 embryo 14-16hr    443 embryo 16-18hr    376 embryo 18-20hr    216 embryo 20-22hr    431 embryo 22-24hr    444 larva L1    272 larva L2    276 larva L3 12hr old    193 larva L3 puffstage 1-2    268 larva L3 puffstage 3-6    373 larva L3 puffstage 7-9    428 white prepupae new    433 white prepupae 12hr    487 white prepupae 24hr    505 pupae 2d postWPP    340 pupae 3d postWPP    218 pupae 4d postWPP    157 adult male 01day    281 adult male 05day    354 adult male 30day    300 adult female 01day    518 adult female 05day    1196 adult female 30day    1113 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1926) embryo 02-04hr  (1957) embryo 04-06hr  (1799) embryo 06-08hr  (1037) embryo 08-10hr  (893) embryo 10-12hr  (546) embryo 12-14hr  (551) embryo 14-16hr  (443) embryo 16-18hr  (376) embryo 18-20hr  (216) embryo 20-22hr  (431) embryo 22-24hr  (444) larva L1  (272) larva L2  (276) larva L3 12hr old  (193) larva L3 puffstage 1-2  (268) larva L3 puffstage 3-6  (373) larva L3 puffstage 7-9  (428) white prepupae new  (433) white prepupae 12hr  (487) white prepupae 24hr  (505) pupae 2d postWPP  (340) pupae 3d postWPP  (218) pupae 4d postWPP  (157) adult male 01day  (281) adult male 05day  (354) adult male 30day  (300) adult female 01day  (518) adult female 05day  (1196) adult female 30day  (1113) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  1926 embryo 02-04hr  1957 embryo 04-06hr  1799 embryo 06-08hr    1037 embryo 08-10hr    893 embryo 10-12hr    546 embryo 12-14hr    551 embryo 14-16hr    443 embryo 16-18hr    376 embryo 18-20hr    216 embryo 20-22hr    431 embryo 22-24hr    444 larva L1    272 larva L2    276 larva L3 12hr old    193 larva L3 puffstage 1-2    268 larva L3 puffstage 3-6    373 larva L3 puffstage 7-9    428 white prepupae new    433 white prepupae 12hr    487 white prepupae 24hr    505 pupae 2d postWPP    340 pupae 3d postWPP    218 pupae 4d postWPP    157 adult male 01day    281 adult male 05day    354 adult male 30day    300 adult female 01day    518 adult female 05day    1196 adult female 30day    1113 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1926 embryo 02-04hr    1957 embryo 04-06hr    1799 embryo 06-08hr    1037 embryo 08-10hr    893 embryo 10-12hr    546 embryo 12-14hr    551 embryo 14-16hr    443 embryo 16-18hr    376 embryo 18-20hr    216 embryo 20-22hr    431 embryo 22-24hr    444 larva L1    272 larva L2    276 larva L3 12hr old    193 larva L3 puffstage 1-2    268 larva L3 puffstage 3-6    373 larva L3 puffstage 7-9    428 white prepupae new    433 white prepupae 12hr    487 white prepupae 24hr    505 pupae 2d postWPP    340 pupae 3d postWPP    218 pupae 4d postWPP    157 adult male 01day    281 adult male 05day    354 adult male 30day    300 adult female 01day    518 adult female 05day    1196 adult female 30day    1113 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1926 embryo 02-04hr    1957 embryo 04-06hr    1799 embryo 06-08hr    1037 embryo 08-10hr    893 embryo 10-12hr    546 embryo 12-14hr    551 embryo 14-16hr    443 embryo 16-18hr    376 embryo 18-20hr    216 embryo 20-22hr    431 embryo 22-24hr    444 larva L1    272 larva L2    276 larva L3 12hr old    193 larva L3 puffstage 1-2    268 larva L3 puffstage 3-6    373 larva L3 puffstage 7-9    428 white prepupae new    433 white prepupae 12hr    487 white prepupae 24hr    505 pupae 2d postWPP    340 pupae 3d postWPP    218 pupae 4d postWPP    157 adult male 01day    281 adult male 05day    354 adult male 30day    300 adult female 01day    518 adult female 05day    1196 adult female 30day    1113 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0043002    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0043002 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression at high levels in the following post-embryonic organs or tissues: adult ovary. Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system, larval trachea. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Heatmap Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut no informative data Larval Malpighian Tubules no informative data Larval Fat Body no informative data Larval Salivary Gland no informative data Larval Trachea no informative data Larval Carcass no informative data Adult Head no informative data Adult Eye no informative data Adult Brain no informative data Adult Thoracic-Abdominal Ganglion no informative data Adult Crop no informative data Adult Midgut no informative data Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary no informative data Adult Testis no informative data Adult Male Accessory Gland     Adult Carcass no informative data modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_17
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0043002 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG32956-RE FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for Chrac-14 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 7-8 Stages(s) 9-10 Stages(s) 11-12
Alleles & Phenotypes
Summary of Allele Phenotypes
Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of Chrac-14 Class Mutagen Stocks Known lesion Chrac-14KG01051 P-element activity 1 Yes
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Chrac-14 Class Mutagen Stocks Known lesion Chrac-14GLV21017 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Chrac-14JF01500 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(2L)Exel8021 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{TRiP.GLV21017} NA P{TRiP.JF01500} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{SUPor-P}mus201KG01051 NA
Gene Ontology: Function, Process & Cellular Component ( 7 unique terms )
Terms Based on Experimental Evidence ( 6 terms )
Molecular Function
CV term Evidence References
protein binding inferred from physical interaction with Iswi (Corona et al., 2000) protein heterodimerization activity inferred from physical interaction with Chrac-16 (Corona et al., 2000)
Biological Process
CV term Evidence References
nucleosome mobilization inferred from direct assay (Corona et al., 2000, Suganuma et al., 2008) response to DNA damage stimulus inferred from mutant phenotype (Ravi et al., 2009)
Cellular Component
CV term Evidence References
Ada2/Gcn5/Ada3 transcription activator complex inferred from physical interaction with Ada2a (Suganuma et al., 2008) chromatin accessibility complex inferred from direct assay (Eberharter et al., 2001, Corona et al., 2000)
Terms Based on Predictions or Assertions ( 2 terms )
Molecular Function
CV term Evidence References
sequence-specific DNA binding inferred from electronic annotation with InterPro:IPR003958 (FlyBase Curators et al., 2004-)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
chromatin accessibility complex non-traceable author statement (Corona, 2000.1.25)
Sequence Ontology: Class of Gene
	gene_with_dicistronic_mRNA (FlyBase Genome Annotators, 2002-2003) nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Chrac-14 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 533926 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0043002 DroID - A comprehensive database of gene and protein interactions. • FBgn0043002 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 3772329
Orthologs
Genome-wide drosophilid orthologs	Dana\GF15525 Dere\GG10552 Dgri\GH10953 Dmoj\GI10366 Dper\GL25948 Dpse\GA17216 Dsec\GM16944 Dsim\GD23542 Dvir\GJ18023 Dwil\GK18418 Dyak\Chrac-14
Curated drosophilid orthologs	Dpse\GA17216   Dyak\Chrac-14
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL001764-PA Aedes aegypti (mosquito) AGAP005051-PA Anopheles gambiae (mosquito) AGAP012825-PA Anopheles gambiae (mosquito) XP_001122640.1 Apis mellifera (honey bee) XP_001950699.1 Acyrthosiphon pisum (pea aphid) 271015 Branchiostoma floridae (lancelet) XP_001892451.1 Brugia malayi (roundworm nematode) BGIBMGA000081-PA Bombyx mori (silk worm) ENSBTAP00000000316 Bos taurus (bovine) CN04410 Caenorhabditis brenneri (small nematode) CBP11274 Caenorhabditis briggsae (nematode) CE00787 Caenorhabditis elegans (worm) ENSCAFP00000004818 Canis familiaris (dog) ENSCINP00000028553 Ciona intestinalis (sea squirt) ENSCINP00000029076 Ciona intestinalis (sea squirt) JA12637 Caenorhabditis japonica (nematode) CPIJ016568 Culex pipens (mosquito) CPIJ020000 Culex pipens (mosquito) ENSCPOP00000000272 Cavia porcellus (guinea pig) 184024 Capitella spl (polychaete worm) DDB0216318 Dictyostelium discoideum (amoeba) ENSDARP00000002886 Danio rerio (zebra fish) ENSECAP00000002400 Equus caballus (horse) ENSGACP00000023106 Gymnopilus aculeatus (mushroom) ENSGALP00000039553 Gallus gallus (chicken) 75183 Hypsipyla robusta (cedar shoot borer) ENSP00000363284 Homo sapiens (human) ISCW003833-PA Ixodes scapularis (deer tick) 238643 Lottia gigantea (owl limpet) ENSMODP00000005367 Monodelphis domestica (gray opossum) ENSMMUP00000009409 Macaca mulatta (rhesus monkey) ENSMUSP00000030091 Mus musculus (house mouse) 170236 Nematostella vectensis (starlet anemone) XP_001606159.1 Nasonia vitripennis (wasp) ENSORLP00000000708 Oryzias latipes (japanese killifish) PHUM010110-PA Pediculus humanus (human body louse) PP22640 Pristionchus pacificus (nematode) ENSPPYP00000021877 Pongo pygmaeus (orangutan) ENSPTRP00000036348 Pan troglodytes (chimpanzee) ENSRNOP00000006416 Rattus norvegicus (norway rat) ENSRNOP00000020722 Rattus norvegicus (norway rat) SPBC3D6.09 Schizosaccharomyces pombe (fission yeast) XP_785187.1 Strongylocentrotus purpuratus (purple sea urchin) XP_967974.1 Tribolium castaneum (red flour beetle) ENSTNIP00000006028 Tetraodon nigroviridis (green spotted pufferfish) 19632 Thalassiosira pseudonana (marine diatom) ENSTRUP00000029379 Takifugu rubripes (pufferfish Takifugu) YALI0A05401g Yarrowia lipolytica (nonconventional yeast) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB19421 NV16911 LH14579 ISCW003833 FBgn0068177 FBgn0220416 FBgn0205188 FBgn0194920 FBgn0171857 FBgn0077229 FBgn0163534 FBgn0163532 FBgn0154237 FBgn0133130 FBgn0118434 FBgn0102860 FBgn0092550 CPIJ016568 CPIJ020000 BGIBMGA000081 ACYPI000283 GB14966 AGAP012825 AGAP005051 AAEL001764 PHUM474950 GLEAN_04017
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
Bloomington	31052 y1 v1; P{TRiP.JF01500}attP2 35652 y1 sc* v1; P{TRiP.GLV21017}attP2 13190 y1 w67c23; P{SUPor-P}mus201KG01051 Chrac-14KG01051
Genomic Clones ( 1 )
	BACR02I15 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 88 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE06926 RE62451
Other clones	DPiM_RE06926 yak-em_Chrac
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GM01831 GM04761 RE07013 RE70829
Other clones	44372 214537.4 571306 Dmel_neb_013095_0188_2546 EK159625 EN16551 EP02461 FGH120C09 IP14964 RM07491 RM07492 RM07591 RM07691 RM07891 RM07892 RM07992 RM08091 RM08092 RM08192 RP01007 RP001009095 RP001010441 RP001010695 RP001012559 RP001012717 RP001013456 RP001019385 RP001021219 RP001021608 RP001023031 RP001023696 RP001026281 RP001027909 RP001032482 RP001033106 RP001034587 RP001037436 RP001040230 RP001043540 RP001046284 RP001046957 RP001053696 RP004036482 RP004065755 RP004114857 RP004161226 RP004162912 RP004178257 RP004178704 RP004180626 RP004184365 RP004202670 RP004203523 RP004207299 RP004209681 RP004209686 RP004217821 RP004224782 RP004225073 RP004227714 RP004230718 RP004250276 RP004254287 RP004255177 RP004257628 RP004258005 RP004372927 RP004391075 RP004395993 RP004400047 RP004401213 RP004402909 RP004418114 RP004431242 RP004446989 RP004461912 RP004529661 RP004533000 RP004535702 RP004549881
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0043002 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 318269 3772329
Antibody Information
	polyclonal (Suganuma et al., 2008)
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: mary CG13399 (FlyBase, 1996-)
Additional comments	Dicistronic annotation CG32956 split out into separate annotations for each open reading frame, CG13399 and CG10890, in release 4.2 of the genome annotation. CG13399 corresponds to Chrac-14 and CG10890 corresponds to mus201. (FlyBase Genome Annotators, 2005) Source for merge of mary CG13399 was sequence comparison (date:000725). (FlyBase Genome Annotators, 2002-2003, FlyBase, 1996-)
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_057298 NM_057299 RefSeq (Proteins) • NP_476646 NP_476647 DDBJ / EMBL / GenBank • AA695912 AAF52677 AAF52677.1 AAF52678.1 AAG22424.1 AAL48592 AAO41168 AAO41168.1 AAO41169.1 AF125578 AF144092 AF162792 AF162793 AF162795 AI237921 AJ271141 AJ389385 AY070970 BH614957 BI166720 BT015206 CAB70602 Entrez Gene - A searchable database of RefSeq genes. • 3772329 UniProtKB/TrEMBL • Q9V444
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Transcription factor CBF/NF-Y/archaeal histone (IPR003958) Histone-fold (IPR009072)
Linkouts
	BioGRID - A database of protein and genetic interactions • 533926 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0043002 DroID - A comprehensive database of gene and protein interactions. • FBgn0043002 DRSC - Results from RNAi screens. • FBgn0043002 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0043002 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG32956-RE FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0043002 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 318269 3772329 InParanoid A subset of ortholog calls from InParanoid. • AAEL001764-PA Aedes aegypti (mosquito) AGAP005051-PA Anopheles gambiae (mosquito) AGAP012825-PA Anopheles gambiae (mosquito) XP_001122640.1 Apis mellifera (honey bee) XP_001950699.1 Acyrthosiphon pisum (pea aphid) 271015 Branchiostoma floridae (lancelet) XP_001892451.1 Brugia malayi (roundworm nematode) BGIBMGA000081-PA Bombyx mori (silk worm) ENSBTAP00000000316 Bos taurus (bovine) CN04410 Caenorhabditis brenneri (small nematode) CBP11274 Caenorhabditis briggsae (nematode) CE00787 Caenorhabditis elegans (worm) ENSCAFP00000004818 Canis familiaris (dog) ENSCINP00000028553 Ciona intestinalis (sea squirt) ENSCINP00000029076 Ciona intestinalis (sea squirt) JA12637 Caenorhabditis japonica (nematode) CPIJ016568 Culex pipens (mosquito) CPIJ020000 Culex pipens (mosquito) ENSCPOP00000000272 Cavia porcellus (guinea pig) 184024 Capitella spl (polychaete worm) DDB0216318 Dictyostelium discoideum (amoeba) ENSDARP00000002886 Danio rerio (zebra fish) ENSECAP00000002400 Equus caballus (horse) ENSGACP00000023106 Gymnopilus aculeatus (mushroom) ENSGALP00000039553 Gallus gallus (chicken) 75183 Hypsipyla robusta (cedar shoot borer) ENSP00000363284 Homo sapiens (human) ISCW003833-PA Ixodes scapularis (deer tick) 238643 Lottia gigantea (owl limpet) ENSMODP00000005367 Monodelphis domestica (gray opossum) ENSMMUP00000009409 Macaca mulatta (rhesus monkey) ENSMUSP00000030091 Mus musculus (house mouse) 170236 Nematostella vectensis (starlet anemone) XP_001606159.1 Nasonia vitripennis (wasp) ENSORLP00000000708 Oryzias latipes (japanese killifish) PHUM010110-PA Pediculus humanus (human body louse) PP22640 Pristionchus pacificus (nematode) ENSPPYP00000021877 Pongo pygmaeus (orangutan) ENSPTRP00000036348 Pan troglodytes (chimpanzee) ENSRNOP00000006416 Rattus norvegicus (norway rat) ENSRNOP00000020722 Rattus norvegicus (norway rat) SPBC3D6.09 Schizosaccharomyces pombe (fission yeast) XP_785187.1 Strongylocentrotus purpuratus (purple sea urchin) XP_967974.1 Tribolium castaneum (red flour beetle) ENSTNIP00000006028 Tetraodon nigroviridis (green spotted pufferfish) 19632 Thalassiosira pseudonana (marine diatom) ENSTRUP00000029379 Takifugu rubripes (pufferfish Takifugu) YALI0A05401g Yarrowia lipolytica (nonconventional yeast) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 3772329 modMine - Data generated by the modENCODE project. • FBgn0043002 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB19421 NV16911 LH14579 ISCW003833 FBgn0068177 FBgn0220416 FBgn0205188 FBgn0194920 FBgn0171857 FBgn0077229 FBgn0163534 FBgn0163532 FBgn0154237 FBgn0133130 FBgn0118434 FBgn0102860 FBgn0092550 CPIJ016568 CPIJ020000 BGIBMGA000081 ACYPI000283 GB14966 AGAP012825 AGAP005051 AAEL001764 PHUM474950 GLEAN_04017
Synonyms & Secondary IDs ( 10 )
Reported As
Symbol Synonym	55A11T (Louis et al., 1997) 13399 (Ravi et al., 2009) CG13399 (Haussmann et al., 2008, Ni et al., 2008, Ni et al., 2011.7.19) CG32956 (Giot et al., 2003, ) CHRAC (Bonaldi et al., 2002, Ridgway and Almouzni, 2001) CHRAC14 (Eberharter and Becker, 2004, Langst and Becker, 2001, Furrer et al., 2010, Hartlepp et al., 2005, Suganuma et al., 2008) CHRAC-14 (Eberharter et al., 2001, Corona et al., 2000) Chrac-14   ESTS:55A11T   mary (Corona, 2000.1.25, )
Name Synonym	Chrac-14
Secondary FlyBase IDs
	FBgn0015712 FBgn0032043 FBgn0040090 FBgn0052956 FBpp0079283 FBpp0079284 FBpp0079285 FBpp0079286 FBpp0079287 FBtr0079668 FBtr0079669 FBtr0079670 FBtr0079671 FBtr0079672
References ( 30 )
Generate a list of	All references relating to this gene ( 30 )
List References by type	Research paper  ( 12 ) Supplementary material  ( 2 ) Review  ( 4 ) Personal communication to FlyBase  ( 3 ) FlyBase analysis  ( 4 ) DNA/RNA sequence record  ( 1 ) Computer file  ( 2 ) Automatic genome annotation  ( 1 ) Curated genome annotation  ( 1 )
Recent research papers ( 1 )
	Furrer et al., 2010, J. Biol. Chem. 285(51): 39623--39636 Drosophila Myc Interacts with Host Cell Factor (dHCF) to Activate Transcription and Control Growth. [FBrf0212501] Show all research papers ...
Recent reviews (0)
	All reviews listed in FlyBase were published before 2010 Show reviews ...