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Gene Dmel\CG4747

General Information
Symbol	Dmel\CG4747	Species	D. melanogaster
Name		Annotation symbol	CG4747
Feature type	protein_coding_gene	FlyBase ID	FBgn0043456
Gene Model Status	Current	Stock availability	6 publicly available
Also Known As	BEST:LD22483
Genomic Location
Chromosome (arm)	2L	Recombination map
Cytogenetic map	30F5-30F5	Sequence location	2L:10,003,825..10,008,889 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG4747 (FBgn0043456). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: 3-hydroxyisobutyrate dehydrogenase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: pentose-phosphate shunt. 7 alleles are reported. The phenotypes of these alleles are annotated with: trichogen cell; dorsocentral bristle; tormogen cell; scutellar bristle. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: 6-phosphogluconate dehydrogenase, C-terminal-like; 6-phosphogluconate dehydrogenase, NADP-binding; Dehydrogenase, multihelical; Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type; NAD(P)-binding domain; PWWP. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed within 00-18 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval central nervous system, larval salivary gland, adult ovary. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, adult salivary gland, larval trachea, adult spermathecae, adult male accessory gland, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1634579_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG4747. Gene sequence location is 2L:10003825..10008889.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03	Alleles CG4747[3] CG4747[T:Zzzz\BTS,T:Saur\A] Transgenic Constructs PBac{CG4747-TAP} Controlled Vocabulary Terms polytene chromosome interband
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 30F5-30F5   Limits computationally determined from genome sequence between P{EP}CG5899EP701 and P{EP}CG4747EP594&P{lacW}l(2)k13305k13305
Experimentally Determined Cytological Location
Cytogenetic map Notes References 30F5-30F6   (determined by in situ hybridisation)   (Abdelilah-Seyfried et al., 2000)
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG4747 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG4747-RA FBtr0079930  NM_135492   3154   602 CG4747-RB FBtr0303902  NM_001201838   3157   603
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG4747-PA   FBpp0079520   65.3   602   5.93     NP_609336   AAF52846 CG4747-PB   FBpp0292905   65.4   603   5.76     NP_001188767   ADV37017
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • PWWP (IPR000313) 6-phosphogluconate dehydrogenase, NADP-binding (IPR006115) Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type (IPR015815) 6-phosphogluconate dehydrogenase, C-terminal-like (IPR008927) Dehydrogenase, multihelical (IPR013328) NAD(P)-binding domain (IPR016040)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA201838   AA202357   AA246481   AA263516   AA264194   AA264237   AA390647   AA391020   AA391888   AA438943   AA439672   AA536352   AA696479   AA801891   AA816476   AA817174   AA817266   AA817272   AA817637   AA820356   AA820403   AA820822   AA941070   AA941124   AA941309   AA942081   AA948945   AA949218   AA949466   AA949744   AA951199   AA952139   AA990777   AA990889   AE014134 AAF52846   AE014134 ADV37017   AI061757   AI061931   AI238832   AI260510   AI388468   AI455016   AI456467   AI512910   AI513182   AI515884   AI516518   AI517868   AI518074   AI518520   AI518565   AI518795   AI518835   AI519318   AI532014   AI532322   AI532858   AI534033   AI542783   AI543515   AI543887   AI544191   AI546192   AI546317   AI546412   AQ026447   AY069497 AAL39642   BF505108   BG636073   BG636388   BG638747   BG639059   BI141853   BI162183   BI164847   BI166514   BI167187   BI168270   BI170742   BI171987   BI172629   BI213603   BI214535   BI214921   BI215152   BI216330   BI231851   BI231971   BI232835   BI236211   BI238208   BI239647   BI240659   BI351629   BI354808   BI354963   BI355871   BI356078   BI362678   BI365107   BI367900   BI369420   BI371823   BI372221   BI372316   BI482670   BI482986   BI486016   BI564320   BI568396   BI570778   BI571187   BI575517   BI578179   BI578902   BI583070   BI586047   BI589363   BI590958   BI591621   BI627660   BI632846   BI632878   BI633271   BI633534   BI636807   BI640497   BI641606   BP552384   BP557991   BP557992   BQ102976   BQ103153   CO155310   CO156021   CO177459   CO178222   CO187272   CO191511   CO192869   CO194387   CO272536   CO281087   CO281572   CO282486   CO282615   CO285124   CO294936   CO296421   CO297355   CO299900   CO303047   CO303239   CO303243   CO308800   CO309988   CO312086   CO313890   CO318361   CO318467   CO319109   CO332407   CO336528   CO339482   CO340437   CO340788   CO341221   EC057551   EC058304   EC063028   EC084887   EC201513   EC202002   EC202749   EC203099   EC205153   EC210520   EC211722   EC222506   EC225457   EC233674   EC234057   EC234231   EC236209   EC237523   EC237614   EC239792   EC239952   EC243747   EC250130   EC250332   EC251133   EC255843   EC259312   EC261454   EC265663   EC267571   EL871231   EL871232   EL877675   EL877676   EV574850   EV578406   EV580822   EV587447   EV596170   GH748833   GH754820   GH755981   GH760278   GH777911   GH779540   GH780103   GH782408   GH783112   GH793220   GH793632   GH806925   GH810742   GH812804   GH815122   GH823813   GH825262   GH834725   GH834805   GH836503   GH840541   GH842688   GH855628   GH859644   GH861240   GH868015   GH871847   GH881029   GH882879   GH883498   GH886025   GH887680   GH895886   GH902043   GH902659   GH903752   GH904059   GH907498   GH908963   GH911891   GH916009   GH929741   GH931521   GH931649   GH933274   GH934081   GH942503
UniProtKB/Swiss-Prot	Q8T079
UniProtKB/TrEMBL
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 4 -- 6   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 7 -- 8   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 9 -- 10   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 11 -- 12   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 13 -- 16   organism | ubiquitous   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
mass spectroscopy Stage Tissue/Position (including subcellular localization) Reference day 7 of adulthood -- day 49 of adulthood   adult heart   (Cammarato et al., 2011)
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
polytene chromosome interband inferred from direct assay (Wang et al., 2013)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval central nervous system, larval salivary gland, adult ovary. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, adult salivary gland, larval trachea, adult spermathecae, adult male accessory gland, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    769.1 Larval Midgut    185.5 Larval Hindgut    365.8 Larval Malpighian Tubules    215.9 Larval Fat Body    152.9 Larval Salivary Gland    621.9 Larval Trachea    481.1 Larval Carcass    289.8 Adult Head    173.7 Adult Eye    220.8 Adult Brain    423.2 Adult Thoracic-Abdominal Ganglion    260.7 Adult Crop    253.9 Adult Midgut    205 Adult Hindgut    207 Adult Malpighian Tubules    124.1 Adult Fat Body    217.9 Adult Salivary Gland    188.8 Adult Heart    204.825 Adult VirginFemale Spermatheca    116.6 Adult InseminatedFemale Spermatheca    157.5 Adult Ovary    779.3 Adult Testis    98.5 Adult Male Accessory Gland    360.2 Adult Carcass    146.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  (769.1) Larval Midgut    185.5 Larval Hindgut    365.8 Larval Malpighian Tubules    215.9 Larval Fat Body    152.9 Larval Salivary Gland  (621.9) Larval Trachea    481.1 Larval Carcass    289.8 Adult Head    173.7 Adult Eye    220.8 Adult Brain    423.2 Adult Thoracic-Abdominal Ganglion    260.7 Adult Crop    253.9 Adult Midgut    205 Adult Hindgut    207 Adult Malpighian Tubules    124.1 Adult Fat Body    217.9 Adult Salivary Gland    188.8 Adult Heart    204.825 Adult VirginFemale Spermatheca    116.6 Adult InseminatedFemale Spermatheca    157.5 Adult Ovary  (779.3) Adult Testis    98.5 Adult Male Accessory Gland    360.2 Adult Carcass    146.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    769.1 Larval Midgut    185.5 Larval Hindgut    365.8 Larval Malpighian Tubules    215.9 Larval Fat Body    152.9 Larval Salivary Gland    621.9 Larval Trachea    481.1 Larval Carcass    289.8 Adult Head    173.7 Adult Eye    220.8 Adult Brain    423.2 Adult Thoracic-Abdominal Ganglion    260.7 Adult Crop    253.9 Adult Midgut    205 Adult Hindgut    207 Adult Malpighian Tubules    124.1 Adult Fat Body    217.9 Adult Salivary Gland    188.8 Adult Heart    204.825 Adult VirginFemale Spermatheca    116.6 Adult InseminatedFemale Spermatheca    157.5 Adult Ovary    779.3 Adult Testis    98.5 Adult Male Accessory Gland    360.2 Adult Carcass    146.9 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    769.1 Larval Midgut    185.5 Larval Hindgut    365.8 Larval Malpighian Tubules    215.9 Larval Fat Body    152.9 Larval Salivary Gland    621.9 Larval Trachea    481.1 Larval Carcass    289.8 Adult Head    173.7 Adult Eye    220.8 Adult Brain    423.2 Adult Thoracic-Abdominal Ganglion    260.7 Adult Crop    253.9 Adult Midgut    205 Adult Hindgut    207 Adult Malpighian Tubules    124.1 Adult Fat Body    217.9 Adult Salivary Gland    188.8 Adult Heart    204.825 Adult VirginFemale Spermatheca    116.6 Adult InseminatedFemale Spermatheca    157.5 Adult Ovary    779.3 Adult Testis    98.5 Adult Male Accessory Gland    360.2 Adult Carcass    146.9 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    769.1 Larval Midgut    185.5 Larval Hindgut    365.8 Larval Malpighian Tubules    215.9 Larval Fat Body    152.9 Larval Salivary Gland    621.9 Larval Trachea    481.1 Larval Carcass    289.8 Adult Head    173.7 Adult Eye    220.8 Adult Brain    423.2 Adult Thoracic-Abdominal Ganglion    260.7 Adult Crop    253.9 Adult Midgut    205 Adult Hindgut    207 Adult Malpighian Tubules    124.1 Adult Fat Body    217.9 Adult Salivary Gland    188.8 Adult Heart    204.825 Adult VirginFemale Spermatheca    116.6 Adult InseminatedFemale Spermatheca    157.5 Adult Ovary    779.3 Adult Testis    98.5 Adult Male Accessory Gland    360.2 Adult Carcass    146.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  769.1 Larval Midgut    185.5 Larval Hindgut    365.8 Larval Malpighian Tubules    215.9 Larval Fat Body    152.9 Larval Salivary Gland  621.9 Larval Trachea    481.1 Larval Carcass    289.8 Adult Head    173.7 Adult Eye    220.8 Adult Brain    423.2 Adult Thoracic-Abdominal Ganglion    260.7 Adult Crop    253.9 Adult Midgut    205 Adult Hindgut    207 Adult Malpighian Tubules    124.1 Adult Fat Body    217.9 Adult Salivary Gland    188.8 Adult Heart    204.825 Adult VirginFemale Spermatheca    116.6 Adult InseminatedFemale Spermatheca    157.5 Adult Ovary  779.3 Adult Testis    98.5 Adult Male Accessory Gland    360.2 Adult Carcass    146.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    769.1 Larval Midgut    185.5 Larval Hindgut    365.8 Larval Malpighian Tubules    215.9 Larval Fat Body    152.9 Larval Salivary Gland    621.9 Larval Trachea    481.1 Larval Carcass    289.8 Adult Head    173.7 Adult Eye    220.8 Adult Brain    423.2 Adult Thoracic-Abdominal Ganglion    260.7 Adult Crop    253.9 Adult Midgut    205 Adult Hindgut    207 Adult Malpighian Tubules    124.1 Adult Fat Body    217.9 Adult Salivary Gland    188.8 Adult Heart    204.825 Adult VirginFemale Spermatheca    116.6 Adult InseminatedFemale Spermatheca    157.5 Adult Ovary    779.3 Adult Testis    98.5 Adult Male Accessory Gland    360.2 Adult Carcass    146.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    769.1 Larval Midgut    185.5 Larval Hindgut    365.8 Larval Malpighian Tubules    215.9 Larval Fat Body    152.9 Larval Salivary Gland    621.9 Larval Trachea    481.1 Larval Carcass    289.8 Adult Head    173.7 Adult Eye    220.8 Adult Brain    423.2 Adult Thoracic-Abdominal Ganglion    260.7 Adult Crop    253.9 Adult Midgut    205 Adult Hindgut    207 Adult Malpighian Tubules    124.1 Adult Fat Body    217.9 Adult Salivary Gland    188.8 Adult Heart    204.825 Adult VirginFemale Spermatheca    116.6 Adult InseminatedFemale Spermatheca    157.5 Adult Ovary    779.3 Adult Testis    98.5 Adult Male Accessory Gland    360.2 Adult Carcass    146.9 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    173.7   NA  Eye    220.8   NA  Brain    423.2   769.1  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    260.7   NA  Crop    253.9   185.5  Midgut    205   365.8  Hindgut    207   215.9  Malpighian Tubules    124.1   152.9  Fat Body    217.9   621.9  Salivary Gland    188.8   NA  Heart    204.825   481.1  Trachea    NA   NA  VirginFemale Spermatheca    116.6   NA  InseminatedFemale Spermatheca    157.5   NA  Ovary    779.3   NA  Testis    98.5   NA  Male Accessory Gland    360.2   289.8  Carcass    146.9 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    171 central nervous system, larvae L3    253 central nervous system, pupae P8    88 head, virgin 1-day female    59 head, virgin 4-day female    63 head, virgin 20-day female    39 head, mated 1-day female    58 head, mated 4-day female    58 head, mated 20-day female    43 head, mated 1-day male    59 head, mated 4-day male    76 head, mated 20-day male    85 salivary gland, larvae L3 wandering    29 salivary gland, white prepupae    54 digestive system, larvae L3 wandering    56 digestive system, 1-day adult    40 digestive system, 4-day adult    64 digestive system, 20-day adult    48 fat body, larvae L3 wandering    33 fat body, white prepupae    67 fat body, pupae P8    81 carcass, larvae L3 wandering    148 carcass, 1-day adult    41 carcass, 4-day adult    65 carcass, 20-day adult    50 ovary, virgin 4-day female    294 ovary, mated 4-day female    312 testis, mated 4-day male    41 accessory gland, mated 4-day male    47 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (171) central nervous system, larvae L3  (253) central nervous system, pupae P8  (88) head, virgin 1-day female  (59) head, virgin 4-day female  (63) head, virgin 20-day female  (39) head, mated 1-day female  (58) head, mated 4-day female  (58) head, mated 20-day female  (43) head, mated 1-day male  (59) head, mated 4-day male  (76) head, mated 20-day male  (85) salivary gland, larvae L3 wandering  (29) salivary gland, white prepupae  (54) digestive system, larvae L3 wandering  (56) digestive system, 1-day adult  (40) digestive system, 4-day adult  (64) digestive system, 20-day adult  (48) fat body, larvae L3 wandering  (33) fat body, white prepupae  (67) fat body, pupae P8  (81) carcass, larvae L3 wandering  (148) carcass, 1-day adult  (41) carcass, 4-day adult  (65) carcass, 20-day adult  (50) ovary, virgin 4-day female  (294) ovary, mated 4-day female  (312) testis, mated 4-day male  (41) accessory gland, mated 4-day male  (47) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (171) central nervous system, larvae L3  (253) central nervous system, pupae P8    88 head, virgin 1-day female    59 head, virgin 4-day female    63 head, virgin 20-day female    39 head, mated 1-day female    58 head, mated 4-day female    58 head, mated 20-day female    43 head, mated 1-day male    59 head, mated 4-day male    76 head, mated 20-day male    85 salivary gland, larvae L3 wandering    29 salivary gland, white prepupae    54 digestive system, larvae L3 wandering    56 digestive system, 1-day adult    40 digestive system, 4-day adult    64 digestive system, 20-day adult    48 fat body, larvae L3 wandering    33 fat body, white prepupae    67 fat body, pupae P8    81 carcass, larvae L3 wandering  (148) carcass, 1-day adult    41 carcass, 4-day adult    65 carcass, 20-day adult    50 ovary, virgin 4-day female  (294) ovary, mated 4-day female  (312) testis, mated 4-day male    41 accessory gland, mated 4-day male    47 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    171 central nervous system, larvae L3    253 central nervous system, pupae P8    88 head, virgin 1-day female    59 head, virgin 4-day female    63 head, virgin 20-day female    39 head, mated 1-day female    58 head, mated 4-day female    58 head, mated 20-day female    43 head, mated 1-day male    59 head, mated 4-day male    76 head, mated 20-day male    85 salivary gland, larvae L3 wandering    29 salivary gland, white prepupae    54 digestive system, larvae L3 wandering    56 digestive system, 1-day adult    40 digestive system, 4-day adult    64 digestive system, 20-day adult    48 fat body, larvae L3 wandering    33 fat body, white prepupae    67 fat body, pupae P8    81 carcass, larvae L3 wandering    148 carcass, 1-day adult    41 carcass, 4-day adult    65 carcass, 20-day adult    50 ovary, virgin 4-day female    294 ovary, mated 4-day female    312 testis, mated 4-day male    41 accessory gland, mated 4-day male    47 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    171 central nervous system, larvae L3    253 central nervous system, pupae P8    88 head, virgin 1-day female    59 head, virgin 4-day female    63 head, virgin 20-day female    39 head, mated 1-day female    58 head, mated 4-day female    58 head, mated 20-day female    43 head, mated 1-day male    59 head, mated 4-day male    76 head, mated 20-day male    85 salivary gland, larvae L3 wandering    29 salivary gland, white prepupae    54 digestive system, larvae L3 wandering    56 digestive system, 1-day adult    40 digestive system, 4-day adult    64 digestive system, 20-day adult    48 fat body, larvae L3 wandering    33 fat body, white prepupae    67 fat body, pupae P8    81 carcass, larvae L3 wandering    148 carcass, 1-day adult    41 carcass, 4-day adult    65 carcass, 20-day adult    50 ovary, virgin 4-day female    294 ovary, mated 4-day female    312 testis, mated 4-day male    41 accessory gland, mated 4-day male    47 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (171) central nervous system, larvae L3  (253) central nervous system, pupae P8  (88) head, virgin 1-day female  (59) head, virgin 4-day female  (63) head, virgin 20-day female  (39) head, mated 1-day female  (58) head, mated 4-day female  (58) head, mated 20-day female  (43) head, mated 1-day male  (59) head, mated 4-day male  (76) head, mated 20-day male  (85) salivary gland, larvae L3 wandering  29 salivary gland, white prepupae  (54) digestive system, larvae L3 wandering  (56) digestive system, 1-day adult  (40) digestive system, 4-day adult  (64) digestive system, 20-day adult  (48) fat body, larvae L3 wandering  (33) fat body, white prepupae  (67) fat body, pupae P8  (81) carcass, larvae L3 wandering  (148) carcass, 1-day adult  (41) carcass, 4-day adult  (65) carcass, 20-day adult  (50) ovary, virgin 4-day female  (294) ovary, mated 4-day female  (312) testis, mated 4-day male  (41) accessory gland, mated 4-day male  (47) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (171) central nervous system, larvae L3  (253) central nervous system, pupae P8    88 head, virgin 1-day female    59 head, virgin 4-day female    63 head, virgin 20-day female    39 head, mated 1-day female    58 head, mated 4-day female    58 head, mated 20-day female    43 head, mated 1-day male    59 head, mated 4-day male    76 head, mated 20-day male    85 salivary gland, larvae L3 wandering    29 salivary gland, white prepupae    54 digestive system, larvae L3 wandering    56 digestive system, 1-day adult    40 digestive system, 4-day adult    64 digestive system, 20-day adult    48 fat body, larvae L3 wandering    33 fat body, white prepupae    67 fat body, pupae P8    81 carcass, larvae L3 wandering  (148) carcass, 1-day adult    41 carcass, 4-day adult    65 carcass, 20-day adult    50 ovary, virgin 4-day female  (294) ovary, mated 4-day female  (312) testis, mated 4-day male    41 accessory gland, mated 4-day male    47 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    171 central nervous system, larvae L3    253 central nervous system, pupae P8    88 head, virgin 1-day female    59 head, virgin 4-day female    63 head, virgin 20-day female    39 head, mated 1-day female    58 head, mated 4-day female    58 head, mated 20-day female    43 head, mated 1-day male    59 head, mated 4-day male    76 head, mated 20-day male    85 salivary gland, larvae L3 wandering    29 salivary gland, white prepupae    54 digestive system, larvae L3 wandering    56 digestive system, 1-day adult    40 digestive system, 4-day adult    64 digestive system, 20-day adult    48 fat body, larvae L3 wandering    33 fat body, white prepupae    67 fat body, pupae P8    81 carcass, larvae L3 wandering    148 carcass, 1-day adult    41 carcass, 4-day adult    65 carcass, 20-day adult    50 ovary, virgin 4-day female    294 ovary, mated 4-day female    312 testis, mated 4-day male    41 accessory gland, mated 4-day male    47 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed within 00-18 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    169 embryo 02-04hr    242 embryo 04-06hr    295 embryo 06-08hr    382 embryo 08-10hr    279 embryo 10-12hr    181 embryo 12-14hr    152 embryo 14-16hr    102 embryo 16-18hr    77 embryo 18-20hr    42 embryo 20-22hr    51 embryo 22-24hr    54 larva L1    62 larva L2    65 larva L3 12hr old    41 larva L3 puffstage 1-2    35 larva L3 puffstage 3-6    56 larva L3 puffstage 7-9    67 white prepupae new    64 white prepupae 12hr    59 white prepupae 24hr    73 pupae 2d postWPP    38 pupae 3d postWPP    23 pupae 4d postWPP    20 adult male 01day    24 adult male 05day    24 adult male 30day    23 adult female 01day    59 adult female 05day    95 adult female 30day    91 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (169) embryo 02-04hr  (242) embryo 04-06hr  (295) embryo 06-08hr  (382) embryo 08-10hr  (279) embryo 10-12hr  (181) embryo 12-14hr  (152) embryo 14-16hr  (102) embryo 16-18hr  (77) embryo 18-20hr  (42) embryo 20-22hr  (51) embryo 22-24hr  (54) larva L1  (62) larva L2  (65) larva L3 12hr old  (41) larva L3 puffstage 1-2  (35) larva L3 puffstage 3-6  (56) larva L3 puffstage 7-9  (67) white prepupae new  (64) white prepupae 12hr  (59) white prepupae 24hr  (73) pupae 2d postWPP  (38) pupae 3d postWPP    23 pupae 4d postWPP    20 adult male 01day    24 adult male 05day    24 adult male 30day    23 adult female 01day  (59) adult female 05day  (95) adult female 30day  (91) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr  (169) embryo 02-04hr  (242) embryo 04-06hr  (295) embryo 06-08hr  (382) embryo 08-10hr  (279) embryo 10-12hr  (181) embryo 12-14hr  (152) embryo 14-16hr  102 embryo 16-18hr    77 embryo 18-20hr    42 embryo 20-22hr    51 embryo 22-24hr    54 larva L1    62 larva L2    65 larva L3 12hr old    41 larva L3 puffstage 1-2    35 larva L3 puffstage 3-6    56 larva L3 puffstage 7-9    67 white prepupae new    64 white prepupae 12hr    59 white prepupae 24hr    73 pupae 2d postWPP    38 pupae 3d postWPP    23 pupae 4d postWPP    20 adult male 01day    24 adult male 05day    24 adult male 30day    23 adult female 01day    59 adult female 05day    95 adult female 30day    91 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    169 embryo 02-04hr    242 embryo 04-06hr    295 embryo 06-08hr    382 embryo 08-10hr    279 embryo 10-12hr    181 embryo 12-14hr    152 embryo 14-16hr    102 embryo 16-18hr    77 embryo 18-20hr    42 embryo 20-22hr    51 embryo 22-24hr    54 larva L1    62 larva L2    65 larva L3 12hr old    41 larva L3 puffstage 1-2    35 larva L3 puffstage 3-6    56 larva L3 puffstage 7-9    67 white prepupae new    64 white prepupae 12hr    59 white prepupae 24hr    73 pupae 2d postWPP    38 pupae 3d postWPP    23 pupae 4d postWPP    20 adult male 01day    24 adult male 05day    24 adult male 30day    23 adult female 01day    59 adult female 05day    95 adult female 30day    91 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    169 embryo 02-04hr    242 embryo 04-06hr    295 embryo 06-08hr    382 embryo 08-10hr    279 embryo 10-12hr    181 embryo 12-14hr    152 embryo 14-16hr    102 embryo 16-18hr    77 embryo 18-20hr    42 embryo 20-22hr    51 embryo 22-24hr    54 larva L1    62 larva L2    65 larva L3 12hr old    41 larva L3 puffstage 1-2    35 larva L3 puffstage 3-6    56 larva L3 puffstage 7-9    67 white prepupae new    64 white prepupae 12hr    59 white prepupae 24hr    73 pupae 2d postWPP    38 pupae 3d postWPP    23 pupae 4d postWPP    20 adult male 01day    24 adult male 05day    24 adult male 30day    23 adult female 01day    59 adult female 05day    95 adult female 30day    91 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (169) embryo 02-04hr  (242) embryo 04-06hr  (295) embryo 06-08hr  (382) embryo 08-10hr  (279) embryo 10-12hr  (181) embryo 12-14hr  (152) embryo 14-16hr  (102) embryo 16-18hr  (77) embryo 18-20hr  (42) embryo 20-22hr  (51) embryo 22-24hr  (54) larva L1  (62) larva L2  (65) larva L3 12hr old  (41) larva L3 puffstage 1-2  (35) larva L3 puffstage 3-6  (56) larva L3 puffstage 7-9  (67) white prepupae new  (64) white prepupae 12hr  (59) white prepupae 24hr  (73) pupae 2d postWPP  (38) pupae 3d postWPP    23 pupae 4d postWPP    20 adult male 01day    24 adult male 05day    24 adult male 30day    23 adult female 01day  (59) adult female 05day  (95) adult female 30day  (91) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr  (169) embryo 02-04hr  (242) embryo 04-06hr  (295) embryo 06-08hr  (382) embryo 08-10hr  (279) embryo 10-12hr  (181) embryo 12-14hr  (152) embryo 14-16hr  102 embryo 16-18hr    77 embryo 18-20hr    42 embryo 20-22hr    51 embryo 22-24hr    54 larva L1    62 larva L2    65 larva L3 12hr old    41 larva L3 puffstage 1-2    35 larva L3 puffstage 3-6    56 larva L3 puffstage 7-9    67 white prepupae new    64 white prepupae 12hr    59 white prepupae 24hr    73 pupae 2d postWPP    38 pupae 3d postWPP    23 pupae 4d postWPP    20 adult male 01day    24 adult male 05day    24 adult male 30day    23 adult female 01day    59 adult female 05day    95 adult female 30day    91 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    169 embryo 02-04hr    242 embryo 04-06hr    295 embryo 06-08hr    382 embryo 08-10hr    279 embryo 10-12hr    181 embryo 12-14hr    152 embryo 14-16hr    102 embryo 16-18hr    77 embryo 18-20hr    42 embryo 20-22hr    51 embryo 22-24hr    54 larva L1    62 larva L2    65 larva L3 12hr old    41 larva L3 puffstage 1-2    35 larva L3 puffstage 3-6    56 larva L3 puffstage 7-9    67 white prepupae new    64 white prepupae 12hr    59 white prepupae 24hr    73 pupae 2d postWPP    38 pupae 3d postWPP    23 pupae 4d postWPP    20 adult male 01day    24 adult male 05day    24 adult male 30day    23 adult female 01day    59 adult female 05day    95 adult female 30day    91 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    321 Schneider line 2 Sg4    155 embryonic 1182-4H    180 embryonic GM2    211 embryonic Kc167    113 embryonic S1    297 embryonic S3    277 leg disc CME L1    231 wing disc CME-W2    127 wing disc ML-DmD8    199 wing disc ML-DmD9    216 wing disc ML-DmD16-c3    255 wing disc ML-DmD21    226 wing disc ML-DmD32    239 haltere disc ML-DmD17-c3    416 eye-antennal disc ML-DmD11    202 antennal disc ML-DmD20-c5    177 mixed discs ML-DmD4-c1    304 CNS ML-DmBG1-c1    245 CNS ML-DmBG2-c2    207 tumorous blood cells mbn2    298 ovary fGS/OSS    439 ovary OSC    330 ovary OSS    233 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (321) Schneider line 2 Sg4  (155) embryonic 1182-4H  (180) embryonic GM2  (211) embryonic Kc167  (113) embryonic S1  (297) embryonic S3  (277) leg disc CME L1  (231) wing disc CME-W2  (127) wing disc ML-DmD8  (199) wing disc ML-DmD9  (216) wing disc ML-DmD16-c3  (255) wing disc ML-DmD21  (226) wing disc ML-DmD32  (239) haltere disc ML-DmD17-c3  (416) eye-antennal disc ML-DmD11  (202) antennal disc ML-DmD20-c5  (177) mixed discs ML-DmD4-c1  (304) CNS ML-DmBG1-c1  (245) CNS ML-DmBG2-c2  (207) tumorous blood cells mbn2  (298) ovary fGS/OSS  (439) ovary OSC  (330) ovary OSS  (233) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  (321) Schneider line 2 Sg4  (155) embryonic 1182-4H  (180) embryonic GM2  (211) embryonic Kc167  (113) embryonic S1  (297) embryonic S3  (277) leg disc CME L1  (231) wing disc CME-W2  (127) wing disc ML-DmD8  (199) wing disc ML-DmD9  (216) wing disc ML-DmD16-c3  (255) wing disc ML-DmD21  (226) wing disc ML-DmD32  (239) haltere disc ML-DmD17-c3  (416) eye-antennal disc ML-DmD11  (202) antennal disc ML-DmD20-c5  (177) mixed discs ML-DmD4-c1  (304) CNS ML-DmBG1-c1  (245) CNS ML-DmBG2-c2  (207) tumorous blood cells mbn2  (298) ovary fGS/OSS  (439) ovary OSC  (330) ovary OSS  (233) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    321 Schneider line 2 Sg4    155 embryonic 1182-4H    180 embryonic GM2    211 embryonic Kc167    113 embryonic S1    297 embryonic S3    277 leg disc CME L1    231 wing disc CME-W2    127 wing disc ML-DmD8    199 wing disc ML-DmD9    216 wing disc ML-DmD16-c3    255 wing disc ML-DmD21    226 wing disc ML-DmD32    239 haltere disc ML-DmD17-c3    416 eye-antennal disc ML-DmD11    202 antennal disc ML-DmD20-c5    177 mixed discs ML-DmD4-c1    304 CNS ML-DmBG1-c1    245 CNS ML-DmBG2-c2    207 tumorous blood cells mbn2    298 ovary fGS/OSS    439 ovary OSC    330 ovary OSS    233 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    321 Schneider line 2 Sg4    155 embryonic 1182-4H    180 embryonic GM2    211 embryonic Kc167    113 embryonic S1    297 embryonic S3    277 leg disc CME L1    231 wing disc CME-W2    127 wing disc ML-DmD8    199 wing disc ML-DmD9    216 wing disc ML-DmD16-c3    255 wing disc ML-DmD21    226 wing disc ML-DmD32    239 haltere disc ML-DmD17-c3    416 eye-antennal disc ML-DmD11    202 antennal disc ML-DmD20-c5    177 mixed discs ML-DmD4-c1    304 CNS ML-DmBG1-c1    245 CNS ML-DmBG2-c2    207 tumorous blood cells mbn2    298 ovary fGS/OSS    439 ovary OSC    330 ovary OSS    233 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (321) Schneider line 2 Sg4  (155) embryonic 1182-4H  (180) embryonic GM2  (211) embryonic Kc167  (113) embryonic S1  (297) embryonic S3  (277) leg disc CME L1  (231) wing disc CME-W2  (127) wing disc ML-DmD8  (199) wing disc ML-DmD9  (216) wing disc ML-DmD16-c3  (255) wing disc ML-DmD21  (226) wing disc ML-DmD32  (239) haltere disc ML-DmD17-c3  (416) eye-antennal disc ML-DmD11  (202) antennal disc ML-DmD20-c5  (177) mixed discs ML-DmD4-c1  (304) CNS ML-DmBG1-c1  (245) CNS ML-DmBG2-c2  (207) tumorous blood cells mbn2  (298) ovary fGS/OSS  (439) ovary OSC  (330) ovary OSS  (233) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  (321) Schneider line 2 Sg4  (155) embryonic 1182-4H  (180) embryonic GM2  (211) embryonic Kc167  113 embryonic S1  (297) embryonic S3  (277) leg disc CME L1  (231) wing disc CME-W2  127 wing disc ML-DmD8  (199) wing disc ML-DmD9  (216) wing disc ML-DmD16-c3  (255) wing disc ML-DmD21  (226) wing disc ML-DmD32  (239) haltere disc ML-DmD17-c3  (416) eye-antennal disc ML-DmD11  (202) antennal disc ML-DmD20-c5  (177) mixed discs ML-DmD4-c1  (304) CNS ML-DmBG1-c1  (245) CNS ML-DmBG2-c2  (207) tumorous blood cells mbn2  (298) ovary fGS/OSS  (439) ovary OSC  (330) ovary OSS  (233) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    321 Schneider line 2 Sg4    155 embryonic 1182-4H    180 embryonic GM2    211 embryonic Kc167    113 embryonic S1    297 embryonic S3    277 leg disc CME L1    231 wing disc CME-W2    127 wing disc ML-DmD8    199 wing disc ML-DmD9    216 wing disc ML-DmD16-c3    255 wing disc ML-DmD21    226 wing disc ML-DmD32    239 haltere disc ML-DmD17-c3    416 eye-antennal disc ML-DmD11    202 antennal disc ML-DmD20-c5    177 mixed discs ML-DmD4-c1    304 CNS ML-DmBG1-c1    245 CNS ML-DmBG2-c2    207 tumorous blood cells mbn2    298 ovary fGS/OSS    439 ovary OSC    330 ovary OSS    233 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    97 cold shock, 4-day adult    71 heat shock, 4-day adult    95 Cadmium 50 mM 6 hrs, larvae L3    48 Cadmium 50 mM 12 hrs, larvae L3    66 Cadmium 50 mM 48 hrs, 4-day adult    115 Cadmium 100 mM 48 hrs, 4-day adult    241 Copper 0.5 mM 12 hrs, larvae L3    68 Copper 15 mM 48 hrs, 4-day adult    285 Zinc 5 mM 12 hrs, larvae L3    58 Zinc 4.5 mM 48 hrs, 4-day adult    130 Ethanol 2.5% 3 hrs, larvae L3    144 Ethanol 5% 3 hrs, larvae L3    48 Ethanol 10% 3 hrs, larvae L3    47 Caffeine 1.5 mg/ml 4 hrs, larvae L3    39 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    211 Caffeine 25 mg/ml 48 hrs, 4-day adult    113 Paraquat 5 mM 48 hrs, 4-day adult    157 Paraquat 10 mM 48 hrs, 4-day adult    107 Rotenone 2 μg 12 hrs, larvae L3    49 Rotenone 8 μg 12 hrs, larvae L3    41 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  (97) cold shock, 4-day adult  (71) heat shock, 4-day adult  (95) Cadmium 50 mM 6 hrs, larvae L3  (48) Cadmium 50 mM 12 hrs, larvae L3  (66) Cadmium 50 mM 48 hrs, 4-day adult  (115) Cadmium 100 mM 48 hrs, 4-day adult  (241) Copper 0.5 mM 12 hrs, larvae L3  (68) Copper 15 mM 48 hrs, 4-day adult  (285) Zinc 5 mM 12 hrs, larvae L3  (58) Zinc 4.5 mM 48 hrs, 4-day adult  (130) Ethanol 2.5% 3 hrs, larvae L3  (144) Ethanol 5% 3 hrs, larvae L3  (48) Ethanol 10% 3 hrs, larvae L3  (47) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (39) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (211) Caffeine 25 mg/ml 48 hrs, 4-day adult  (113) Paraquat 5 mM 48 hrs, 4-day adult  (157) Paraquat 10 mM 48 hrs, 4-day adult  (107) Rotenone 2 μg 12 hrs, larvae L3  (49) Rotenone 8 μg 12 hrs, larvae L3  (41) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    97 cold shock, 4-day adult    71 heat shock, 4-day adult    95 Cadmium 50 mM 6 hrs, larvae L3    48 Cadmium 50 mM 12 hrs, larvae L3    66 Cadmium 50 mM 48 hrs, 4-day adult  (115) Cadmium 100 mM 48 hrs, 4-day adult  (241) Copper 0.5 mM 12 hrs, larvae L3    68 Copper 15 mM 48 hrs, 4-day adult  (285) Zinc 5 mM 12 hrs, larvae L3    58 Zinc 4.5 mM 48 hrs, 4-day adult  (130) Ethanol 2.5% 3 hrs, larvae L3  (144) Ethanol 5% 3 hrs, larvae L3    48 Ethanol 10% 3 hrs, larvae L3    47 Caffeine 1.5 mg/ml 4 hrs, larvae L3    39 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (211) Caffeine 25 mg/ml 48 hrs, 4-day adult  (113) Paraquat 5 mM 48 hrs, 4-day adult  (157) Paraquat 10 mM 48 hrs, 4-day adult  107 Rotenone 2 μg 12 hrs, larvae L3    49 Rotenone 8 μg 12 hrs, larvae L3    41 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    97 cold shock, 4-day adult    71 heat shock, 4-day adult    95 Cadmium 50 mM 6 hrs, larvae L3    48 Cadmium 50 mM 12 hrs, larvae L3    66 Cadmium 50 mM 48 hrs, 4-day adult    115 Cadmium 100 mM 48 hrs, 4-day adult    241 Copper 0.5 mM 12 hrs, larvae L3    68 Copper 15 mM 48 hrs, 4-day adult    285 Zinc 5 mM 12 hrs, larvae L3    58 Zinc 4.5 mM 48 hrs, 4-day adult    130 Ethanol 2.5% 3 hrs, larvae L3    144 Ethanol 5% 3 hrs, larvae L3    48 Ethanol 10% 3 hrs, larvae L3    47 Caffeine 1.5 mg/ml 4 hrs, larvae L3    39 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    211 Caffeine 25 mg/ml 48 hrs, 4-day adult    113 Paraquat 5 mM 48 hrs, 4-day adult    157 Paraquat 10 mM 48 hrs, 4-day adult    107 Rotenone 2 μg 12 hrs, larvae L3    49 Rotenone 8 μg 12 hrs, larvae L3    41 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    97 cold shock, 4-day adult    71 heat shock, 4-day adult    95 Cadmium 50 mM 6 hrs, larvae L3    48 Cadmium 50 mM 12 hrs, larvae L3    66 Cadmium 50 mM 48 hrs, 4-day adult    115 Cadmium 100 mM 48 hrs, 4-day adult    241 Copper 0.5 mM 12 hrs, larvae L3    68 Copper 15 mM 48 hrs, 4-day adult    285 Zinc 5 mM 12 hrs, larvae L3    58 Zinc 4.5 mM 48 hrs, 4-day adult    130 Ethanol 2.5% 3 hrs, larvae L3    144 Ethanol 5% 3 hrs, larvae L3    48 Ethanol 10% 3 hrs, larvae L3    47 Caffeine 1.5 mg/ml 4 hrs, larvae L3    39 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    211 Caffeine 25 mg/ml 48 hrs, 4-day adult    113 Paraquat 5 mM 48 hrs, 4-day adult    157 Paraquat 10 mM 48 hrs, 4-day adult    107 Rotenone 2 μg 12 hrs, larvae L3    49 Rotenone 8 μg 12 hrs, larvae L3    41 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  (97) cold shock, 4-day adult  (71) heat shock, 4-day adult  (95) Cadmium 50 mM 6 hrs, larvae L3  (48) Cadmium 50 mM 12 hrs, larvae L3  (66) Cadmium 50 mM 48 hrs, 4-day adult  (115) Cadmium 100 mM 48 hrs, 4-day adult  (241) Copper 0.5 mM 12 hrs, larvae L3  (68) Copper 15 mM 48 hrs, 4-day adult  (285) Zinc 5 mM 12 hrs, larvae L3  (58) Zinc 4.5 mM 48 hrs, 4-day adult  (130) Ethanol 2.5% 3 hrs, larvae L3  (144) Ethanol 5% 3 hrs, larvae L3  (48) Ethanol 10% 3 hrs, larvae L3  (47) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (39) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (211) Caffeine 25 mg/ml 48 hrs, 4-day adult  (113) Paraquat 5 mM 48 hrs, 4-day adult  (157) Paraquat 10 mM 48 hrs, 4-day adult  (107) Rotenone 2 μg 12 hrs, larvae L3  (49) Rotenone 8 μg 12 hrs, larvae L3  (41) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    97 cold shock, 4-day adult    71 heat shock, 4-day adult    95 Cadmium 50 mM 6 hrs, larvae L3    48 Cadmium 50 mM 12 hrs, larvae L3    66 Cadmium 50 mM 48 hrs, 4-day adult  115 Cadmium 100 mM 48 hrs, 4-day adult  (241) Copper 0.5 mM 12 hrs, larvae L3    68 Copper 15 mM 48 hrs, 4-day adult  (285) Zinc 5 mM 12 hrs, larvae L3    58 Zinc 4.5 mM 48 hrs, 4-day adult  130 Ethanol 2.5% 3 hrs, larvae L3  (144) Ethanol 5% 3 hrs, larvae L3    48 Ethanol 10% 3 hrs, larvae L3    47 Caffeine 1.5 mg/ml 4 hrs, larvae L3    39 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (211) Caffeine 25 mg/ml 48 hrs, 4-day adult  113 Paraquat 5 mM 48 hrs, 4-day adult  (157) Paraquat 10 mM 48 hrs, 4-day adult  107 Rotenone 2 μg 12 hrs, larvae L3    49 Rotenone 8 μg 12 hrs, larvae L3    41 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    97 cold shock, 4-day adult    71 heat shock, 4-day adult    95 Cadmium 50 mM 6 hrs, larvae L3    48 Cadmium 50 mM 12 hrs, larvae L3    66 Cadmium 50 mM 48 hrs, 4-day adult    115 Cadmium 100 mM 48 hrs, 4-day adult    241 Copper 0.5 mM 12 hrs, larvae L3    68 Copper 15 mM 48 hrs, 4-day adult    285 Zinc 5 mM 12 hrs, larvae L3    58 Zinc 4.5 mM 48 hrs, 4-day adult    130 Ethanol 2.5% 3 hrs, larvae L3    144 Ethanol 5% 3 hrs, larvae L3    48 Ethanol 10% 3 hrs, larvae L3    47 Caffeine 1.5 mg/ml 4 hrs, larvae L3    39 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    211 Caffeine 25 mg/ml 48 hrs, 4-day adult    113 Paraquat 5 mM 48 hrs, 4-day adult    157 Paraquat 10 mM 48 hrs, 4-day adult    107 Rotenone 2 μg 12 hrs, larvae L3    49 Rotenone 8 μg 12 hrs, larvae L3    41 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_17 mE1_20_mRNA_expression_cluster_02
External Data & Images
Linkouts	BDGP expression data • LD22344 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0043456 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG4747-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Other Phenotypes Allele visible, with Scer\GAL4sca-537.4 CG4747EP594 Phenotype manifest in Allele dorsocentral bristle, with Scer\GAL4sca-537.4 CG4747EP594 scutellar bristle, with Scer\GAL4sca-537.4 CG4747EP594 tormogen cell, with Scer\GAL4sca-537.4 CG4747EP594 trichogen cell, with Scer\GAL4sca-537.4 CG4747EP594
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of CG4747 Class Mutagen Stocks Known lesion CG4747CB-6694-3 1 -- CG4747EP594 P-element activity 1 Yes CG47473 amorphic allele - molecular evidence P-element activity 0 Yes
Alleles Carried on Transgenic Constructs ( 6 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG4747 Class Mutagen Stocks Known lesion CG4747HMS00568 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG4747HMS02263 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG4747HMS02530 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG4747KK108595 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG4747GD11414 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes CG4747T:Zzzz\BTS,T:Saur\A in vitro construct - coding region fusion 0 Yes
Aneuploid Aberrations
Partially disrupted in	Df(2L)CG47473 (Wang et al., 2013)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD11414} NA P{KK108595} NA P{TRiP.HMS00568} NA P{TRiP.HMS02263} NA P{TRiP.HMS02530} NA characterization construct PBac{CG4747-TAP} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EP}CG4747EP594 NA P{EP}EP2465 NA miscellaneous insertions P{RS3}CG4747CB-6694-3 NA insertion of enhancer trap P{lacW}l(2)SH1625SH1625 No
Gene Ontology: Function, Process & Cellular Component ( 5 unique terms )
	There is no information supporting a cellular component term for this gene. (Based on a review of available data on: 2008-03-20)
Terms Based on Experimental Evidence ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
polytene chromosome interband inferred from direct assay (Wang et al., 2013)
Terms Based on Predictions or Assertions ( 4 terms )
Molecular Function
CV term Evidence References
3-hydroxyisobutyrate dehydrogenase activity inferred from sequence or structural similarity with EMBL:AE000670 (FlyBase, 1992-) coenzyme binding inferred from electronic annotation with InterPro:IPR013328 (FlyBase Curators et al., 2004-) phosphogluconate dehydrogenase (decarboxylating) activity inferred from electronic annotation with InterPro:IPR006115 (FlyBase Curators et al., 2004-)
Biological Process
CV term Evidence References
pentose-phosphate shunt inferred from electronic annotation with InterPro:IPR006115 (FlyBase Curators et al., 2004-)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
CG4747 - CG11906 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG4747 - CG31917 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG4747 - CG7686 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG4747 - GABPI anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG4747 - HPS1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG4747 - ana2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG4747 - fs(1)h anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG4747 - mTerf5 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG4747 - ttm50 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG4747 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 72969 DroID - A comprehensive database of gene and protein interactions. • FBgn0043456 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 192507
Orthologs
OrthoDB Orthologs (43) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6MSDHW Dipteran inclusive ortholog search EOG6P2Q9M Insect inclusive ortholog search EOG69P8VJ Arthropod inclusive ortholog search EOG6RJDHK Metazoa inclusive ortholog search EOG6TBH4J
Orthologs in Drosophila Species (EOG6MSDHW)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG4747     Drosophila simulans   Dsim\GD23648 Y   Drosophila sechellia   Dsec\GM17855 Y   Drosophila erecta   Dere\GG10076 Y   Drosophila yakuba   Dyak\GE18889 Y   Drosophila ananassae   Dana\GF15736 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA18401 Y   Drosophila persimilis   Dper\GL18953 Y   Drosophila willistoni   Dwil\GK12716 Y   Drosophila virilis   Dvir\GJ17926 Y   Drosophila mojavensis   Dmoj\GI17584 Y   Drosophila grimshawi   Dgri\GH11066 Y
Orthologs in non-Drosophila Dipterans (EOG6P2Q9M)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL017411   Aedes aegypti Yellow fever mosquito  Aaeg\AAEL006837   Aedes aegypti Yellow fever mosquito  Aaeg\AAEL009245   Aedes aegypti Yellow fever mosquito  Aaeg\AAEL006684   Aedes aegypti Yellow fever mosquito  Aaeg\AAEL006850   Aedes aegypti Yellow fever mosquito  Aaeg\AAEL010208   Aedes aegypti Yellow fever mosquito  Aaeg\AAEL008933   Anopheles gambiae Malaria mosquito  Agam\AGAP009949   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ000400
Orthologs in non-Dipteran Insects (EOG69P8VJ)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB55383   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG013433   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH13765   Atta cephalotes Leafcutter ant  Acep\ACEP23162   Camponotus floridanus Florida carpenter ant  Cflo\CFLO19004   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL19921   Linepithema humile Argentine ant  Lhum\LH14957   Solenopsis invicta Red fire ant  Sinv\SINV18962   Acyrthosiphon pisum Pea aphid  Apim\ACYPI003871   Pediculus humanus Human body louse  Phum\PHUM261780   Tribolium castaneum Red flour beetle  Tcas\GLEAN_07359
Orthologs in non-Insect Arthropods (EOG6RJDHK)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\Stard3   Ixodes scapularis Deer tick  Isca\ISCW022143
Orthologs in non-Arthropod Metazoa (EOG6TBH4J)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_015055gn   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_011569gn   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_002284gn   Danio rerio Zebrafish  Drer\glyr1   Xenopus tropicalis Western clawed frog  Xtro\glyr1   Gallus gallus Domestic chicken  Ggal\GLYR1   Mus musculus House mouse  Mmus\Glyr1   Rattus norvegicus Norway rat  Rnor\Glyr1   Homo sapiens Human  Hsap\GLYR1
Human Orthologs (1)
Gene OMIM HGNC Hsap\GLYR1
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD23648 Drosophila sechellia Dsec\GM17855 Drosophila erecta Dere\GG10076 Drosophila yakuba Dyak\GE18889 Drosophila ananassae Dana\GF15736 Drosophila pseudoobscura pseudoobscura Dpse\GA18401 Drosophila persimilis Dper\GL18953 Drosophila willistoni Dwil\GK12716 Drosophila virilis Dvir\GJ17926 Drosophila mojavensis Dmoj\GI17584 Drosophila grimshawi Dgri\GH11066
Stocks & Reagents
Stocks Listed in FlyBase ( 6 )
Bloomington	17183 w1118; P{EP}CG4747EP594 33696 y1 sc* v1; P{TRiP.HMS00568}attP2 41698 y1 sc* v1; P{TRiP.HMS02263}attP40 42838 y1 sc* v1; P{TRiP.HMS02530}attP40
Kyoto	124184 w1118; P{RS3}CG4747CB-6694-3
VDRC	v100783 P{KK108595}VIE-260B
Genomic Clones ( 1 )
	BACR06G16 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 245 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD22344
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT07275 GH14955 GH19401 GM03544 GM07753 GM15447 GM28349 GM29069 GM32668 LD01894 LD02506 LD03749 LD04237 LD05414 LD06639 LD07526 LD07885 LD09648 LD09954 LD10815 LD13343 LD14302 LD16927 LD22483 LD22494 LD23932 LD24001 LD24145 LD24728 LD25022 LD25091 LD25374 LD26113 LD27649 LD28031 LD29212 LD29480 LD29743 LD31544 LD34295 LD34645 LD35016 LD35239 LD36494 LD37486 LD38060 LD38134 LD38558 LD38860 LD41579 LD42411 LD42767 LD42988 LD45017 LD45383 LD45553 LD47226 LD47644 LD47864 LD47976 LP04409 RE01568 RE04604 RE06664 RE07517 RE08870 RE12304 RE13896 RE15164 RE19038 RE20370 RE21075 RE21380 RE23428 RE24390 RE25157 RE28958 RE32241 RE34608 RE36192 RE37559 RE42117 RE47301 RE50334 RE53770 RE55595 RE58825 RE59128 RE59251 RE65387 RE65803 RE69382 RE72012 RE72848 RH04653 RH05559 RH06016 RH06371 RH21514 RH25768 RH31216 RH31791 RH37209 RH39835 RH69027 SD03355 SD03789 SD04492 SD06502 SD09248 SD10306 SD14086 SD15791 SD18632 SD23379 SD25023 SD26731 SD26772 SD27319 SD27648
Other clones	8845 37597 38028 42660 45161 45238 50874 60075 61812 77456 80571 97459 104451 107794 119462 120512 120600 167360 174901 214473.4 214563.1 273441 276648 277555 283746 524724 527062 557951 CK01.32A.G5 CK01.70C.C7 Dmel_dig_005247_0595_1471 Dmel_dig_008125_0612_1440 Dmel_dig_018668_0620_1329 Dmel_neb_013712_0163_2944 Dmel_neb_013737_0580_2876 EC31250 EC34675 EC38450 EK027627 EK053604 EK056112 EK107532 EK155941 EK157458 EK160564 EK160835 EK168264 EK176858 EK185437 EK208017 EK213612 EK216801 EK220211 EK227856 EK234239 EK240642 EK240647 EK259406 EK271809 EK272247 EK276254 EK303354 EN05817 EN07217 EN12719 EP02111 EP10642 EP11345 EP12052 FGM218D12 FGM312D03 IP03363 IP07661 LD34863 RP003042876 RP003045712 RP003053087 RP003073401 RP003074782 RP003078454 RP003098258 RP003133353 RP003135292 RP003142030 RP003145081 RP003153438 RP003197974 RP003206966 RP003220229 RP003235226 RP003236603 RP003249692 RP003260318 RP003270721 RP003301125 RP003320334 RP003346337 RP003357247 RP003382199 RP003398837 RP003430196 RP003435784 RP003437079 RP003441600 RP003445777 RP003448494 RP003461564 RP003467203 RP003473312 RP003474541 RP003497162 RP003507862 RP003510785 RP003530864 RP003533069 RP003534017 RP003534622 RP003575612 RP003646453 RP003649155 RP003673067 SD13662 UUGC0370 UUGC0551
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0043456 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 192507
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: BEST:LD29743 CG4747 (Bayraktaroglu, 2000.11.2) Source for merge of: CG4747 BEST:GH19401 (Rana, 2004.7.8)
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_135492 NM_001201838 RefSeq (Proteins) • NP_609336 NP_001188767 DDBJ / EMBL / GenBank • AA817174 AA817266 AA949744 AAF52846 AAL39642 ADV37017 AI388468 AQ026447 AY069497 Entrez Gene - A searchable database of RefSeq genes. • 192507 UniProtKB/Swiss-Prot • Q8T079
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • PWWP (IPR000313) 6-phosphogluconate dehydrogenase, NADP-binding (IPR006115) Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type (IPR015815) 6-phosphogluconate dehydrogenase, C-terminal-like (IPR008927) Dehydrogenase, multihelical (IPR013328) NAD(P)-binding domain (IPR016040) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • LD22344
Linkouts
	BioGRID - A database of protein and genetic interactions • 72969 DroID - A comprehensive database of gene and protein interactions. • FBgn0043456 DRSC - Results from RNAi screens. • FBgn0043456 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0043456 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG4747-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0043456 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 192507 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 192507 modMine - Data generated by the modENCODE project. • FBgn0043456
Synonyms & Secondary IDs ( 6 )
Reported As
Symbol Synonym	BEST:GH19401   BEST:LD22483 (Abdelilah-Seyfried et al., 2000, Giot et al., 2003, ) BEST:LD29743   CG4747 (Quinones-Coello, 2007, Akdemir et al., 2007, Varma and Mishra, 2011, Keleman et al., 2009.8.5, Ni et al., 2010.12.1, Cammarato et al., 2011, Wang et al., 2013) Dm_AI388468 (Stec et al., 2000) LD29743 (Toba et al., 1999)
Name Synonym
Secondary FlyBase IDs
	FBgn0026572 FBgn0032174 FBgn0041705
References ( 27 )
Generate a list of	All references relating to this gene ( 27 )
List References by type	Research paper  ( 5 ) Supplementary material  ( 7 ) Review  ( 1 ) Personal communication to FlyBase  ( 8 ) FlyBase analysis  ( 3 ) Website  ( 1 ) Curated genome annotation  ( 1 )
Recent research papers ( 2 )
	Wang et al., 2013, Nat. Struct. Mol. Biol. 20(2): 202--209 Chromatin proteins captured by ChIP-mass spectrometry are linked to dosage compensation in Drosophila. [FBrf0220693] Varma and Mishra, 2011, J. Biosci., Bangalore 36(3): 439--459 Dynamics of nuclear matrix proteome during embryonic development in Drosophila melanogaster. [FBrf0214552] Show all research papers ...
Recent reviews (0)
	All reviews listed in FlyBase were published before 2011 Show reviews ...